View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1154_low_4 (Length: 526)

Name: NF1154_low_4
Description: NF1154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1154_low_4
NF1154_low_4
[»] chr5 (38 HSPs)
chr5 (29-158)||(34650827-34650956)
chr5 (29-153)||(8787402-8787526)
chr5 (29-153)||(11957966-11958090)
chr5 (29-154)||(13661871-13661996)
chr5 (29-153)||(35504240-35504363)
chr5 (31-152)||(10054353-10054473)
chr5 (29-153)||(35132585-35132708)
chr5 (29-129)||(12506359-12506459)
chr5 (29-153)||(40564403-40564527)
chr5 (31-146)||(6283627-6283742)
chr5 (29-152)||(21547394-21547517)
chr5 (29-155)||(11846135-11846261)
chr5 (29-153)||(10956015-10956138)
chr5 (29-126)||(20175290-20175387)
chr5 (29-153)||(4268625-4268748)
chr5 (31-119)||(9721640-9721728)
chr5 (29-114)||(39066973-39067058)
chr5 (29-152)||(40057370-40057493)
chr5 (33-98)||(13470218-13470283)
chr5 (29-124)||(31909694-31909784)
chr5 (29-93)||(19647717-19647781)
chr5 (80-152)||(31467834-31467906)
chr5 (101-152)||(19647677-19647728)
chr5 (80-146)||(14214055-14214121)
chr5 (29-115)||(39069443-39069527)
chr5 (29-93)||(10070032-10070095)
chr5 (94-146)||(10955957-10956009)
chr5 (30-125)||(19436865-19436958)
chr5 (31-78)||(4837322-4837369)
chr5 (115-153)||(8927555-8927593)
chr5 (103-153)||(10070086-10070136)
chr5 (80-146)||(30889436-30889502)
chr5 (115-146)||(1919622-1919653)
chr5 (115-146)||(10054501-10054532)
chr5 (115-146)||(10069975-10070006)
chr5 (80-153)||(1383272-1383346)
chr5 (29-66)||(2619643-2619680)
chr5 (115-155)||(20983517-20983557)
[»] chr7 (59 HSPs)
chr7 (29-152)||(24438540-24438663)
chr7 (29-152)||(24798403-24798526)
chr7 (29-152)||(5239348-5239471)
chr7 (31-153)||(34333349-34333470)
chr7 (31-159)||(34606326-34606454)
chr7 (29-152)||(29993487-29993610)
chr7 (29-155)||(42044291-42044416)
chr7 (31-131)||(45045835-45045935)
chr7 (29-152)||(4628629-4628752)
chr7 (29-162)||(12218427-12218559)
chr7 (202-517)||(21335020-21335350)
chr7 (29-153)||(30810718-30810842)
chr7 (31-153)||(13064875-13064998)
chr7 (29-131)||(47839555-47839657)
chr7 (29-154)||(23363165-23363290)
chr7 (31-162)||(18486026-18486157)
chr7 (31-128)||(7689224-7689321)
chr7 (29-152)||(525076-525198)
chr7 (29-131)||(8754606-8754708)
chr7 (33-150)||(28587976-28588093)
chr7 (29-154)||(47083118-47083242)
chr7 (29-125)||(43594063-43594159)
chr7 (29-151)||(5729409-5729531)
chr7 (31-153)||(46716703-46716825)
chr7 (29-151)||(11686324-11686447)
chr7 (29-153)||(37674105-37674227)
chr7 (29-153)||(18117206-18117329)
chr7 (29-147)||(1737043-1737160)
chr7 (38-147)||(28262098-28262207)
chr7 (31-127)||(47657045-47657139)
chr7 (31-127)||(33636517-33636613)
chr7 (50-151)||(23357711-23357812)
chr7 (29-90)||(27456175-27456236)
chr7 (80-153)||(38128406-38128479)
chr7 (29-152)||(22739886-22740010)
chr7 (29-93)||(34546373-34546437)
chr7 (31-90)||(37631604-37631663)
chr7 (31-132)||(18220691-18220791)
chr7 (83-167)||(34556877-34556959)
chr7 (29-152)||(29835704-29835827)
chr7 (41-100)||(47118041-47118100)
chr7 (33-108)||(13556479-13556553)
chr7 (28-99)||(18469993-18470063)
chr7 (80-153)||(19434608-19434680)
chr7 (80-152)||(6097451-6097523)
chr7 (32-159)||(36437443-36437568)
chr7 (115-153)||(36786057-36786095)
chr7 (29-125)||(4087686-4087781)
chr7 (80-153)||(30923987-30924062)
chr7 (78-153)||(6820026-6820100)
chr7 (115-146)||(18485967-18485998)
chr7 (31-106)||(20116955-20117029)
chr7 (115-146)||(31320383-31320414)
chr7 (115-146)||(34333290-34333321)
chr7 (102-149)||(34546336-34546383)
chr7 (115-146)||(35791653-35791684)
chr7 (31-120)||(4100557-4100645)
chr7 (115-143)||(30703698-30703726)
chr7 (80-128)||(32805653-32805701)
[»] chr6 (50 HSPs)
chr6 (29-153)||(392159-392283)
chr6 (31-153)||(32929507-32929629)
chr6 (29-153)||(4215758-4215882)
chr6 (29-152)||(3515829-3515952)
chr6 (29-154)||(32985191-32985316)
chr6 (29-160)||(2581015-2581146)
chr6 (31-153)||(23402203-23402325)
chr6 (29-153)||(26467123-26467247)
chr6 (29-152)||(12145117-12145240)
chr6 (29-152)||(18276612-18276738)
chr6 (29-153)||(27433555-27433679)
chr6 (29-158)||(12525782-12525911)
chr6 (29-148)||(3026013-3026132)
chr6 (29-146)||(2350715-2350832)
chr6 (29-152)||(1391178-1391301)
chr6 (31-146)||(7851165-7851280)
chr6 (29-152)||(35043953-35044074)
chr6 (31-139)||(5323465-5323573)
chr6 (29-153)||(25165412-25165536)
chr6 (29-129)||(29451138-29451238)
chr6 (29-155)||(21878350-21878470)
chr6 (31-153)||(28225285-28225407)
chr6 (29-153)||(13416959-13417085)
chr6 (29-152)||(31280384-31280501)
chr6 (31-153)||(29978297-29978418)
chr6 (29-132)||(11115117-11115218)
chr6 (29-152)||(34851849-34851972)
chr6 (31-153)||(1840246-1840368)
chr6 (29-121)||(961072-961164)
chr6 (80-155)||(34706835-34706910)
chr6 (29-129)||(9661049-9661149)
chr6 (29-93)||(20898011-20898075)
chr6 (29-121)||(23629607-23629699)
chr6 (29-93)||(34477609-34477673)
chr6 (29-83)||(34396596-34396650)
chr6 (76-133)||(22417303-22417360)
chr6 (80-146)||(34712131-34712197)
chr6 (101-154)||(34477567-34477620)
chr6 (52-119)||(28564322-28564388)
chr6 (84-144)||(1127934-1127994)
chr6 (90-154)||(34494276-34494340)
chr6 (115-154)||(8701343-8701382)
chr6 (101-152)||(20898064-20898114)
chr6 (34-152)||(24227389-24227506)
chr6 (29-65)||(13529518-13529554)
chr6 (115-146)||(392102-392133)
chr6 (115-146)||(1604003-1604034)
chr6 (115-146)||(27433498-27433529)
chr6 (115-143)||(4215704-4215732)
chr6 (35-146)||(22021733-22021844)
[»] chr8 (66 HSPs)
chr8 (29-156)||(168529-168656)
chr8 (29-154)||(27988498-27988622)
chr8 (29-154)||(28045800-28045924)
chr8 (31-152)||(34228747-34228868)
chr8 (29-160)||(30675565-30675695)
chr8 (29-153)||(4537743-4537867)
chr8 (29-152)||(16888544-16888667)
chr8 (29-152)||(16394061-16394184)
chr8 (29-154)||(2805258-2805383)
chr8 (29-152)||(7304518-7304641)
chr8 (29-150)||(16890482-16890603)
chr8 (29-145)||(21595909-21596025)
chr8 (29-152)||(11112702-11112825)
chr8 (29-143)||(12203917-12204031)
chr8 (29-143)||(12448345-12448459)
chr8 (29-158)||(13643075-13643203)
chr8 (29-158)||(13743500-13743628)
chr8 (29-153)||(29444139-29444263)
chr8 (29-133)||(33357148-33357252)
chr8 (29-163)||(36730507-36730640)
chr8 (29-153)||(9063051-9063175)
chr8 (29-152)||(20831553-20831676)
chr8 (28-150)||(39406904-39407024)
chr8 (29-152)||(43119280-43119402)
chr8 (29-153)||(4648257-4648381)
chr8 (29-153)||(42034980-42035104)
chr8 (29-147)||(9253907-9254024)
chr8 (29-153)||(3930232-3930356)
chr8 (29-149)||(28626831-28626950)
chr8 (29-160)||(32113971-32114103)
chr8 (29-152)||(9537824-9537947)
chr8 (29-131)||(37373268-37373370)
chr8 (28-133)||(16785148-16785253)
chr8 (29-153)||(22956768-22956893)
chr8 (29-146)||(42433550-42433666)
chr8 (29-109)||(10870415-10870495)
chr8 (29-152)||(29235298-29235421)
chr8 (29-152)||(40831340-40831463)
chr8 (38-152)||(24843280-24843393)
chr8 (28-105)||(22451846-22451922)
chr8 (84-162)||(2490147-2490225)
chr8 (93-153)||(10618125-10618185)
chr8 (29-93)||(34192838-34192902)
chr8 (80-138)||(39751485-39751543)
chr8 (31-88)||(17467668-17467725)
chr8 (80-153)||(43714187-43714260)
chr8 (110-165)||(9934557-9934612)
chr8 (29-71)||(9278275-9278317)
chr8 (115-153)||(45185052-45185090)
chr8 (42-143)||(39206263-39206363)
chr8 (110-146)||(13643018-13643054)
chr8 (110-146)||(13743443-13743479)
chr8 (59-127)||(14191035-14191103)
chr8 (115-146)||(16394210-16394241)
chr8 (110-153)||(18955840-18955883)
chr8 (115-146)||(30675721-30675752)
chr8 (31-98)||(30933376-30933442)
chr8 (115-146)||(39751621-39751652)
chr8 (113-152)||(43723733-43723772)
chr8 (80-161)||(2270639-2270720)
chr8 (115-152)||(15451218-15451255)
chr8 (80-153)||(40268036-40268109)
chr8 (118-146)||(9254069-9254097)
chr8 (115-143)||(23722257-23722285)
chr8 (84-152)||(29566819-29566887)
chr8 (117-145)||(43714339-43714367)
[»] chr1 (75 HSPs)
chr1 (29-151)||(38162913-38163035)
chr1 (29-160)||(5694384-5694515)
chr1 (29-153)||(18043225-18043349)
chr1 (29-153)||(51065747-51065871)
chr1 (29-162)||(42769980-42770113)
chr1 (29-152)||(30294381-30294504)
chr1 (31-153)||(15227804-15227926)
chr1 (29-154)||(12072060-12072185)
chr1 (29-153)||(29657834-29657958)
chr1 (29-153)||(38701936-38702056)
chr1 (29-153)||(47010056-47010180)
chr1 (29-152)||(24178463-24178586)
chr1 (29-162)||(14350269-14350400)
chr1 (29-152)||(48383111-48383234)
chr1 (29-153)||(3097722-3097843)
chr1 (29-159)||(3784706-3784836)
chr1 (29-157)||(45449239-45449367)
chr1 (29-151)||(13961274-13961396)
chr1 (37-159)||(19031808-19031930)
chr1 (31-152)||(9266728-9266849)
chr1 (29-153)||(17333283-17333405)
chr1 (31-152)||(41730373-41730494)
chr1 (29-158)||(6770400-6770525)
chr1 (29-152)||(30657671-30657788)
chr1 (29-125)||(36446352-36446448)
chr1 (29-153)||(50128171-50128295)
chr1 (29-153)||(43286785-43286911)
chr1 (29-127)||(51368810-51368908)
chr1 (29-126)||(12306980-12307077)
chr1 (29-153)||(8472913-8473037)
chr1 (29-129)||(35985644-35985744)
chr1 (29-153)||(45431341-45431465)
chr1 (29-126)||(48071545-48071642)
chr1 (29-152)||(30217825-30217946)
chr1 (29-146)||(52431644-52431761)
chr1 (29-125)||(29683259-29683355)
chr1 (29-161)||(47532662-47532793)
chr1 (28-152)||(23473464-23473588)
chr1 (61-152)||(19010687-19010778)
chr1 (29-155)||(29210476-29210583)
chr1 (31-114)||(38335234-38335317)
chr1 (29-120)||(37315300-37315390)
chr1 (80-152)||(28725905-28725977)
chr1 (29-146)||(3838783-3838900)
chr1 (101-155)||(21112678-21112732)
chr1 (101-155)||(21117420-21117474)
chr1 (29-153)||(26228256-26228365)
chr1 (80-146)||(30664173-30664239)
chr1 (50-95)||(14881036-14881081)
chr1 (29-146)||(39081864-39081980)
chr1 (80-152)||(38595752-38595824)
chr1 (29-121)||(52749665-52749757)
chr1 (80-155)||(10679629-10679704)
chr1 (80-158)||(23822517-23822593)
chr1 (29-114)||(37503277-37503361)
chr1 (29-89)||(39497370-39497430)
chr1 (29-153)||(15282518-15282637)
chr1 (72-153)||(11796970-11797050)
chr1 (95-154)||(28481973-28482030)
chr1 (94-146)||(28726034-28726086)
chr1 (80-158)||(27456943-27457022)
chr1 (115-146)||(29657777-29657808)
chr1 (115-146)||(38595902-38595933)
chr1 (115-153)||(19940547-19940585)
chr1 (116-146)||(29683201-29683231)
chr1 (116-146)||(42770140-42770170)
chr1 (115-153)||(48282858-48282896)
chr1 (42-99)||(16590269-16590325)
chr1 (29-62)||(19011057-19011090)
chr1 (123-160)||(19068052-19068089)
chr1 (123-160)||(19115942-19115979)
chr1 (91-152)||(39497728-39497789)
chr1 (115-164)||(45225183-45225232)
chr1 (115-143)||(19940685-19940713)
chr1 (115-159)||(29210406-29210450)
[»] chr4 (69 HSPs)
chr4 (29-162)||(16536111-16536244)
chr4 (29-152)||(4268822-4268945)
chr4 (29-158)||(4089205-4089334)
chr4 (29-153)||(29591252-29591376)
chr4 (29-152)||(789530-789653)
chr4 (29-152)||(43944570-43944692)
chr4 (29-153)||(7769001-7769125)
chr4 (29-153)||(36395162-36395286)
chr4 (29-152)||(12356307-12356430)
chr4 (31-154)||(16820917-16821040)
chr4 (31-162)||(43202374-43202504)
chr4 (29-155)||(33108670-33108796)
chr4 (29-153)||(18067878-18068002)
chr4 (29-153)||(50619149-50619272)
chr4 (29-152)||(6164156-6164279)
chr4 (29-152)||(54897371-54897494)
chr4 (29-153)||(32217108-32217231)
chr4 (29-152)||(15186306-15186423)
chr4 (31-153)||(55882748-55882869)
chr4 (29-150)||(19503107-19503228)
chr4 (30-152)||(39877247-39877371)
chr4 (29-150)||(39843970-39844086)
chr4 (29-143)||(47231881-47231995)
chr4 (29-153)||(3783497-3783624)
chr4 (29-154)||(30387132-30387257)
chr4 (29-153)||(37987998-37988122)
chr4 (29-160)||(32202473-32202603)
chr4 (31-153)||(50603292-50603415)
chr4 (29-153)||(4220258-4220381)
chr4 (29-152)||(30154163-30154286)
chr4 (42-152)||(5091612-5091720)
chr4 (29-139)||(42898757-42898869)
chr4 (29-150)||(54655879-54655999)
chr4 (28-152)||(54945780-54945902)
chr4 (31-138)||(46149004-46149111)
chr4 (29-159)||(28755683-28755811)
chr4 (29-131)||(31680484-31680586)
chr4 (29-143)||(53655887-53656001)
chr4 (29-121)||(52533816-52533908)
chr4 (29-124)||(24679671-24679765)
chr4 (29-153)||(31517228-31517352)
chr4 (48-153)||(53003955-53004060)
chr4 (29-93)||(46688264-46688328)
chr4 (29-128)||(41265522-41265620)
chr4 (96-158)||(54054659-54054721)
chr4 (80-161)||(28119897-28119978)
chr4 (29-93)||(42815172-42815237)
chr4 (31-108)||(49915224-49915301)
chr4 (80-154)||(37402757-37402830)
chr4 (29-122)||(53268783-53268875)
chr4 (29-93)||(54054611-54054675)
chr4 (80-143)||(28120058-28120121)
chr4 (48-122)||(8133789-8133862)
chr4 (84-151)||(16572488-16572555)
chr4 (80-146)||(292229-292295)
chr4 (101-147)||(46688229-46688275)
chr4 (29-125)||(52697115-52697210)
chr4 (29-132)||(17344679-17344781)
chr4 (83-152)||(5518886-5518954)
chr4 (115-152)||(10426066-10426103)
chr4 (110-162)||(11893391-11893442)
chr4 (115-146)||(4268971-4269002)
chr4 (115-146)||(15186249-15186280)
chr4 (115-146)||(18068028-18068059)
chr4 (115-146)||(54897314-54897345)
chr4 (51-146)||(1432554-1432650)
chr4 (29-62)||(50167652-50167685)
chr4 (42-153)||(8749795-8749908)
chr4 (83-111)||(39877370-39877398)
[»] chr3 (60 HSPs)
chr3 (29-153)||(52520744-52520868)
chr3 (29-160)||(43786934-43787065)
chr3 (29-153)||(39074482-39074605)
chr3 (29-152)||(6842682-6842805)
chr3 (29-152)||(272283-272406)
chr3 (29-152)||(10617284-10617407)
chr3 (29-152)||(49893394-49893517)
chr3 (29-154)||(858652-858777)
chr3 (29-152)||(46352697-46352820)
chr3 (31-153)||(48725336-48725458)
chr3 (29-153)||(4168246-4168370)
chr3 (29-154)||(43269737-43269862)
chr3 (29-153)||(40362579-40362703)
chr3 (29-151)||(49529269-49529389)
chr3 (29-154)||(2938038-2938163)
chr3 (29-154)||(11308209-11308333)
chr3 (29-146)||(42548158-42548274)
chr3 (29-153)||(18014735-18014859)
chr3 (29-153)||(42964248-42964372)
chr3 (29-153)||(53489823-53489947)
chr3 (29-140)||(2505412-2505523)
chr3 (31-147)||(41304070-41304184)
chr3 (29-152)||(41553940-41554063)
chr3 (29-151)||(33140948-33141070)
chr3 (29-152)||(7468474-7468595)
chr3 (29-149)||(20924055-20924173)
chr3 (29-153)||(41993619-41993742)
chr3 (29-126)||(28139372-28139469)
chr3 (31-132)||(38852282-38852383)
chr3 (29-157)||(50359181-50359309)
chr3 (29-151)||(24488429-24488551)
chr3 (29-119)||(29241700-29241790)
chr3 (29-124)||(50298973-50299068)
chr3 (29-122)||(22248949-22249042)
chr3 (29-153)||(50395562-50395685)
chr3 (30-152)||(52246646-52246768)
chr3 (29-124)||(13159960-13160055)
chr3 (41-152)||(52552549-52552658)
chr3 (29-114)||(2119494-2119577)
chr3 (29-124)||(31514854-31514948)
chr3 (29-93)||(2362894-2362958)
chr3 (111-154)||(53163911-53163954)
chr3 (102-159)||(2362948-2363005)
chr3 (29-65)||(6842606-6842642)
chr3 (115-146)||(272226-272257)
chr3 (115-146)||(23516590-23516621)
chr3 (115-146)||(39074425-39074456)
chr3 (115-146)||(46352640-46352671)
chr3 (115-146)||(49893337-49893368)
chr3 (115-146)||(52520687-52520718)
chr3 (42-124)||(17752762-17752842)
chr3 (42-124)||(19054082-19054162)
chr3 (42-124)||(25743887-25743967)
chr3 (84-157)||(51665710-51665783)
chr3 (115-152)||(18715142-18715179)
chr3 (37-106)||(21010066-21010133)
chr3 (113-162)||(23160570-23160618)
chr3 (116-153)||(36545127-36545164)
chr3 (116-153)||(36563150-36563187)
chr3 (31-128)||(53054869-53054965)
[»] chr2 (55 HSPs)
chr2 (29-153)||(27856395-27856519)
chr2 (31-158)||(20552996-20553123)
chr2 (29-152)||(6580252-6580372)
chr2 (29-158)||(31438709-31438838)
chr2 (29-153)||(4381858-4381982)
chr2 (29-152)||(30486273-30486396)
chr2 (29-152)||(31390075-31390198)
chr2 (29-152)||(32360869-32360992)
chr2 (29-153)||(3668112-3668236)
chr2 (34-154)||(22068318-22068438)
chr2 (29-153)||(34442532-34442655)
chr2 (29-152)||(22887813-22887936)
chr2 (29-152)||(44587965-44588088)
chr2 (29-155)||(26387061-26387187)
chr2 (29-161)||(35851741-35851874)
chr2 (29-146)||(1859225-1859342)
chr2 (29-153)||(8969406-8969530)
chr2 (29-153)||(22567665-22567789)
chr2 (29-151)||(4022480-4022602)
chr2 (29-150)||(561520-561641)
chr2 (31-153)||(32860167-32860288)
chr2 (29-157)||(2898134-2898262)
chr2 (29-145)||(25782840-25782956)
chr2 (34-153)||(28601034-28601153)
chr2 (29-153)||(5093539-5093662)
chr2 (31-128)||(13574053-13574150)
chr2 (29-144)||(38590883-38590997)
chr2 (29-146)||(43637227-43637343)
chr2 (29-115)||(11021259-11021345)
chr2 (29-151)||(27584801-27584922)
chr2 (34-119)||(5881289-5881374)
chr2 (31-124)||(25772176-25772269)
chr2 (29-93)||(26891722-26891786)
chr2 (30-122)||(29102313-29102405)
chr2 (31-99)||(38296242-38296310)
chr2 (29-152)||(39531887-39532008)
chr2 (29-120)||(34123057-34123147)
chr2 (29-99)||(15079012-15079081)
chr2 (84-152)||(31782565-31782633)
chr2 (80-152)||(45262024-45262096)
chr2 (29-124)||(15146695-15146789)
chr2 (29-114)||(10820547-10820630)
chr2 (115-161)||(19036956-19037002)
chr2 (83-152)||(20431555-20431624)
chr2 (80-152)||(26270098-26270170)
chr2 (115-146)||(561667-561698)
chr2 (101-152)||(26891683-26891733)
chr2 (115-146)||(32361018-32361049)
chr2 (115-146)||(35851918-35851949)
chr2 (115-153)||(8373303-8373341)
chr2 (78-143)||(16807234-16807299)
chr2 (78-143)||(16846515-16846580)
chr2 (115-143)||(27856545-27856573)
chr2 (94-146)||(29771422-29771474)
chr2 (35-146)||(44331841-44331952)
[»] scaffold0425 (1 HSPs)
scaffold0425 (29-152)||(10773-10896)
[»] scaffold0188 (1 HSPs)
scaffold0188 (29-153)||(6109-6233)
[»] scaffold0190 (1 HSPs)
scaffold0190 (29-152)||(14959-15082)
[»] scaffold0003 (2 HSPs)
scaffold0003 (29-153)||(53684-53808)
scaffold0003 (115-146)||(53834-53865)
[»] scaffold0113 (1 HSPs)
scaffold0113 (29-152)||(40982-41105)
[»] scaffold0264 (1 HSPs)
scaffold0264 (31-155)||(23026-23150)
[»] scaffold0021 (1 HSPs)
scaffold0021 (29-153)||(116267-116391)
[»] scaffold0007 (1 HSPs)
scaffold0007 (31-152)||(233918-234039)
[»] scaffold0524 (1 HSPs)
scaffold0524 (29-145)||(888-1004)
[»] scaffold0034 (1 HSPs)
scaffold0034 (31-155)||(95582-95705)
[»] scaffold0014 (1 HSPs)
scaffold0014 (29-152)||(68290-68413)
[»] scaffold0038 (1 HSPs)
scaffold0038 (31-153)||(25783-25905)
[»] scaffold0050 (2 HSPs)
scaffold0050 (29-153)||(69289-69412)
scaffold0050 (29-125)||(33709-33804)
[»] scaffold1152 (1 HSPs)
scaffold1152 (29-152)||(741-863)
[»] scaffold0263 (1 HSPs)
scaffold0263 (31-152)||(19585-19706)
[»] scaffold1266 (1 HSPs)
scaffold1266 (29-124)||(355-450)
[»] scaffold0325 (1 HSPs)
scaffold0325 (32-121)||(17502-17590)
[»] scaffold0045 (2 HSPs)
scaffold0045 (29-137)||(50611-50719)
scaffold0045 (29-151)||(53358-53469)
[»] scaffold0002 (1 HSPs)
scaffold0002 (29-124)||(146933-147028)
[»] scaffold0674 (2 HSPs)
scaffold0674 (29-93)||(7956-8020)
scaffold0674 (101-154)||(7914-7967)
[»] scaffold0549 (2 HSPs)
scaffold0549 (29-93)||(7351-7415)
scaffold0549 (101-154)||(7404-7457)
[»] scaffold0206 (2 HSPs)
scaffold0206 (29-93)||(11029-11093)
scaffold0206 (103-152)||(10990-11038)
[»] scaffold0001 (1 HSPs)
scaffold0001 (83-153)||(508986-509058)
[»] scaffold0068 (1 HSPs)
scaffold0068 (115-159)||(52452-52496)


Alignment Details
Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 34650956 - 34650827
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34650956 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 34650857  T
Q  129 cgggggcaccggttagcaggaccctaattt 158  Q
    ||||||||||||||||||||||||||||||    
T  34650856 cgggggcaccggttagcaggaccctaattt 34650827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 8787402 - 8787526
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  8787402 agttaatgcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttttatgataataattccattttatggtatgcttaacctgtgccc 8787501  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  8787502 cgggggcaccggttagcaggaccct 8787526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 11958090 - 11957966
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11958090 agttaatgcaatgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggcatgcttaaccagtgccc 11957991  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | |||||||||||||||||||||||    
T  11957990 caggggcaccggttagcaggaccct 11957966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 13661871 - 13661996
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  13661871 agttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggtaataattctcttttatggtatgcttaacccgtgccc 13661970  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    ||| ||||||||||||||||||||||    
T  13661971 cggaggcaccggttagcaggacccta 13661996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 35504363 - 35504240
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||  |    
T  35504363 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttcccttttatggcaataattcccttttatggtatgcttaacccgtg-tc 35504265  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  35504264 cgggggcaccggttagcaggaccct 35504240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 10054473 - 10054353
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  10054473 ttaatgcattgaaattgtgtaattaatttataataatgtcaaaa-cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccg 10054375  T
Q  131 ggggcaccggttagcaggaccc 152  Q
    |||| |||||||||||||||||    
T  10054374 ggggtaccggttagcaggaccc 10054353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 35132585 - 35132708
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||||||| |||||    
T  35132585 agttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttt-atggtaataattctcttttatggtatgcttaaccaatgccc 35132683  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  35132684 cgggggcaccggttagcaggaccct 35132708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 12506359 - 12506459
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||    
T  12506359 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatagtaataattctcttttatggaatgcttaaccagtgccc 12506458  T
Q  129 c 129  Q
    |    
T  12506459 c 12506459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 40564527 - 40564403
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||||||||||||| ||||||||||||||||||||| | |||    
T  40564527 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttttttttatggtaataattctcttttatggtatgcttaaccaataccc 40564428  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |  ||||||||||||||||||||||    
T  40564427 caagggcaccggttagcaggaccct 40564403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 6283627 - 6283742
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||  ||||||||||||||||||||||||||      
T  6283627 ttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcatttttatggtatgcttaaccagtgcccta 6283726  T
Q  131 ggggcaccggttagca 146  Q
    ||||||||||||||||    
T  6283727 ggggcaccggttagca 6283742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 21547517 - 21547394
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| | ||||||||| | ||||||||||||||||||||| |||    
T  21547517 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttaagttaataattctcatttatggtatgcttaaccagtaccc 21547418  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| | ||||||||||||||||||    
T  21547417 cggagacaccggttagcaggaccc 21547394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 29 - 155
Target Start/End: Original strand, 11846135 - 11846261
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  11846135 agttaatacattgaaattgtgtaattaatttataataaagtcaaaagtagtttccttttatggtaataaatcccttttatagtatgcttaaccagtgccc 11846234  T
Q  129 cgggggcaccggttagcaggaccctaa 155  Q
    |  |||||  |||||||||||||||||    
T  11846235 ctagggcatgggttagcaggaccctaa 11846261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 10956015 - 10956138
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | |||||||||||||| || |||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||    
T  10956015 agttaatgcattgaaattgt-taattaatttataacaaagtcaaaaacaatttccttttatggtaataatttccttttatgatatgcttaaccagtaccc 10956113  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||   | ||||||||||| ||||||    
T  10956114 cgaatgtaccggttagcaagaccct 10956138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 20175290 - 20175387
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgc 126  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||| |||||||||||||||||  |||||||||| |||||    
T  20175290 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatgataataattcccttttataatatgcttaactagtgc 20175387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 4268625 - 4268748
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| |||||||||||||||| ||  | |||||||||||||||||||||||||||||  ||||| |||||||||||||| ||| ||    
T  4268625 agttaatgcattaaaattgtgtaattaatttataaaaaa-taaaaaacagtttccttttatggtaataattttcttttttggtatgcttaacccgtgtcc 4268723  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
     ||||||||||||||| | ||||||    
T  4268724 agggggcaccggttagtatgaccct 4268748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 9721728 - 9721640
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 119  Q
    |||||||||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  9721728 ttaatgcattgaaattgtttaattaatttataataaagtcaaaaacagttttcttttatgataataattcccttttatggtatgtttaa 9721640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 39067058 - 39066973
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatg 114  Q
    |||||||  ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| |||||||| ||||    
T  39067058 agttaatatattgaaattatgtaattaatttataataaagtcaaaaacaatatccttttatggtaataattctcttttatgttatg 39066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 40057370 - 40057493
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||| |||||||||||  | |||||||||||||||||  |||||| |||||| ||||||| |||||| |||||||||||| | || |||||||||| ||    
T  40057370 agttagtgcattgaaatagtataattaatttataataaaatcaaaagcagttttcttttatagtaatatttcccttttatgatgtgtttaaccagtgacc 40057469  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
      | ||||||||||||||||||||    
T  40057470 tcgaggcaccggttagcaggaccc 40057493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 13470218 - 13470283
Alignment:
Q  33 aatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataat 98  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13470218 aatgcattgaaattgtataattaatttataataaagtcaaaaacagtttccttttatggtaataat 13470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 31909694 - 31909784
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||     || ||||||||  |||||||||||||||||||||||    
T  31909694 agttaatgcattgaaattgtgtaattgatttataataaagtcaaaaacagtttcc-----tgataataattttcttttatggtatgcttaaccagt 31909784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 19647781 - 19647717
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| | ||||||||| ||||||| |||| |||||||||||||||||||||    
T  19647781 agttaatgcattgaaattgtataattaattgataataaagtcataaacagtttccttttatggta 19647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 31467834 - 31467906
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||| |||| |||||| | |||||||||||||||||||| ||| |||||||||||| |||||    
T  31467834 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccagggacaccggttagcaagaccc 31467906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 19647728 - 19647677
Alignment:
Q  101 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  19647728 ccttttatggtatgcttaacccgtgccccgggggcaccggttagccggaccc 19647677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 14214121 - 14214055
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||| |||| |||||| | |||||||||||| ||| ||||||||||||||||||||    
T  14214121 ttccttttatggtaagaatttcctttttttgtatgcttaaccggtgtcccgggggcaccggttagca 14214055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 39069443 - 39069527
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataat-gtcaaaaacagtttccttttatggtaataattcccttttatggtatgc 115  Q
    |||||||||||| ||||| ||||||||   ||||||||| || ||||||| |||||||||||||||||||||| |||||||| |||||    
T  39069443 agttaatgcattaaaattgtgtaatta---tataataattgtgaaaaacaatttccttttatggtaataattctcttttatgatatgc 39069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 10070032 - 10070095
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| ||||||||||  ||||||| ||||||||||||||| ||||||||||    
T  10070032 agttaatgcattgaaattgtgtaattaatg-ataataaagtcaaaaacagtttctttttatggta 10070095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 10956009 - 10955957
Alignment:
Q  94 ataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  10956009 ataattcccttttatggtatgcttaaccagtgccccggaggcaacagttagca 10955957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 19436958 - 19436865
Alignment:
Q  30 gttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg 125  Q
    ||||| ||||||||||| | ||||||||||||| ||| || ||||| |||||  ||||||||||||||||| ||||||||||||| || |||||||    
T  19436958 gttaaagcattgaaattgtataattaatttata-taaagttaaaaatagtttt-ttttatggtaataattctcttttatggtatgtttcaccagtg 19436865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 4837322 - 4837369
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacag 78  Q
    |||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  4837322 ttaatgcattgaaattgtgtaattaatttataataaagtcaaatacag 4837369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 8927593 - 8927555
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8927593 cttaaccagtgccccaggggcaccggttagcaggaccct 8927555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 10070086 - 10070136
Alignment:
Q  103 ttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||| || ||| || ||||||||||||||||||||    
T  10070086 ttttatggtatgcttaaccaatgtcccaggagcaccggttagcaggaccct 10070136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 30889502 - 30889436
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||| ||| |||| |||||| | ||||||||||||||| |||||| ||||||| ||||||    
T  30889502 ttccttttatgataaaaatttcctttttttgtatgcttaaccagtaccccggaggcaccgattagca 30889436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 1919622 - 1919653
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  1919622 cttaaccagtgccccgggggcaccggttagca 1919653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 10054501 - 10054532
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  10054501 cttaaccagtgccccgggggcaccggttagca 10054532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 10070006 - 10069975
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  10070006 cttaaccagtgccccgggggcaccggttagca 10069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 1383346 - 1383272
Alignment:
Q  80 ttccttttatggtaataattcccttttatg-gtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||| |||| |||||| |  |||||||||||| ||| ||| | |||||||||||||| ||||||    
T  1383346 ttccttttatggtaagaatttccttttttttgtatgcttaacccgtgtcccagaggcaccggttagcatgaccct 1383272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 2619680 - 2619643
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataa 66  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  2619680 agttaatgtattgaaattgtgtaattaatttataataa 2619643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 20983557 - 20983517
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccctaa 155  Q
    |||| |||||||||||||||||||||||||||  |||||||    
T  20983557 cttatccagtgccccgggggcaccggttagcattaccctaa 20983517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 24438540 - 24438663
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24438540 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 24438639  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||||    
T  24438640 cgggggcaccggttagcaggaccc 24438663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 24798526 - 24798403
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24798526 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatagtatgcttaaccagtgccc 24798427  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    |||||||||| |||||||||||||    
T  24798426 cgggggcaccagttagcaggaccc 24798403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 5239348 - 5239471
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||    
T  5239348 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgcttaacttgtgccc 5239447  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | ||||||| ||||||||||||||    
T  5239448 ccggggcactggttagcaggaccc 5239471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 34333349 - 34333470
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  34333349 ttaatgcattgaaattgtgtaattaatttataataatgtcaaaa-cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccg 34333447  T
Q  131 ggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||    
T  34333448 ggggcaccggttagcaggaccct 34333470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 34606326 - 34606454
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| || |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  34606326 ttaatgcattgaaattgtgaaattaatttataataaagtcaaaagcagtttccttttatggtaataattaccttttatggtatgcttaacccgtgccccg 34606425  T
Q  131 ggggcaccggttagcaggaccctaatttt 159  Q
    || ||||||||||||||||||||| ||||    
T  34606426 ggagcaccggttagcaggaccctattttt 34606454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 29993610 - 29993487
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29993610 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttccttttatggtaataattcccttttatggtatgcttaaccagtgtcc 29993511  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| |||| |||||||||||||||    
T  29993510 cggaggcatcggttagcaggaccc 29993487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 42044416 - 42044291
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  42044416 agttaatagattgaaattgtgtaattaatttataataatgtcaaaaacagttttcttttatggtaataattcccttttatggtatgtttaaccagtgccc 42044317  T
Q  129 cgggggcaccggttagcaggaccctaa 155  Q
    | |||||||||||||||| ||||||||    
T  42044316 c-ggggcaccggttagcatgaccctaa 42044291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 45045835 - 45045935
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45045835 ttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccg 45045934  T
Q  131 g 131  Q
    |    
T  45045935 g 45045935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 4628629 - 4628752
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| | ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  4628629 agttaatacattgaaattgtttaattaatttataataaagtcagaaacagtttacttttatggtaataattcccttttatggtatgcttaaccagtgcct 4628728  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
      ||||||||||||||||||||||    
T  4628729 taggggcaccggttagcaggaccc 4628752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 12218559 - 12218427
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||  | ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  12218559 agttaatgcattgaaattgtgtaattaatttataataaaataaaaaatagtttccttttatggtaataattctcttttatggtatgtttaaccagtgccc 12218460  T
Q  129 cgggggcaccggttagcaggaccctaattttaat 162  Q
    | ||| ||||||||||||||||||| | ||||||    
T  12218459 c-gggacaccggttagcaggacccttaatttaat 12218427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 202 - 517
Target Start/End: Original strand, 21335020 - 21335350
Alignment:
Q  202 agataaccaatgaaaaataaactttgacatgtttcccttgtacaagaaaagaaaaacacgtcaaagtttattttacattagctatatcatatgtc---aa 298  Q
    ||||||||||||||||| ||||||| |||| |||  ||| ||    ||||| |||||||||||||   | |||| || | | ||| |||||||||   ||    
T  21335020 agataaccaatgaaaaacaaactttaacatatttttcttttatcgtaaaaggaaaacacgtcaaaacatgtttttcaatggttatctcatatgtcgtcaa 21335119  T
Q  299 aacagataaatatgttaaaggttgtttctcattggttacatcgtatccaatactcattaaaataatcgaagtgatcttcatcattgattattgccttgcc 398  Q
    |  ||| ||||||||||| || |||| |||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  21335120 agtagaaaaatatgttaa-ggatgttcctcatttgttacatcatatccaatactcattaaaatagtccaagtgatcttcatcattgattattgtcttgcc 21335218  T
Q  399 tttttctttatttgcggtgtcgtaattgattgaactattctttcattt-------------caatgctatcattctcttccaaagatataattcggttac 485  Q
    |||||||||||||| |||||  |||||  ||||| | |||||||||||              ||||||| |||||| ||||||||| | | ||||| |||    
T  21335219 tttttctttatttgtggtgttataatttgttgaatttttctttcatttgaatgctaatgcctaatgctaacattctattccaaagaaacagttcggctac 21335318  T
Q  486 tcgttttcctctatgtgatctcctcttcatct 517  Q
    ||||||||||||||||||| ||||||||||||    
T  21335319 tcgttttcctctatgtgatttcctcttcatct 21335350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 30810718 - 30810842
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||| ||||||| |||||    
T  30810718 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattttcttttatggtatgtttaaccaatgccc 30810817  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | |||| ||||||||| ||||||||    
T  30810818 caggggtaccggttagtaggaccct 30810842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 13064998 - 13064875
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaa-cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcccc 129  Q
    |||||| |||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  13064998 ttaatgtattgaatttgtgtaattaatttataataaagtcaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctct 13064899  T
Q  130 gggggcaccggttagcaggaccct 153  Q
     ||||||||||||||||| |||||    
T  13064898 aggggcaccggttagcagaaccct 13064875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 47839555 - 47839657
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  47839555 agttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgaataaccagtgccc 47839654  T
Q  129 cgg 131  Q
    |||    
T  47839655 cgg 47839657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 23363290 - 23363165
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  23363290 agttaatgcattgaaattgtgtaattaatttataataaagttaaaaacagtttccttttatggtaatatttctcttttatggtatgtttaaccagtgccc 23363191  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    ||    ||||| ||||||||||||||    
T  23363190 cgaaaacaccgattagcaggacccta 23363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 18486026 - 18486157
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||| ||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  18486026 ttaatgtattgaaattgtgtaattaatttataataaagttaaaaacagtttccttttatggtaataatttcattttatggtatgcttaacccgtgccccg 18486125  T
Q  131 ggggcaccggttagcaggaccctaattttaat 162  Q
      | |||||||||||||| ||||  |||||||    
T  18486126 aagacaccggttagcagggccctgtttttaat 18486157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 7689321 - 7689224
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  7689321 ttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatacttaaccagtgccc 7689224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 525198 - 525076
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||| ||||||||| | |    
T  525198 agttaatgcattgaaattgtataattaatttataataaaatcaaaaacagtttccttttatggtaataattctcttttatgatatgtttaaccagtactc 525099  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | || |||||||||||||||||||    
T  525098 c-ggagcaccggttagcaggaccc 525076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 8754708 - 8754606
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||||||||||||||||| ||| |||    
T  8754708 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttgttttatggtaataatttccttttatggtatgcttaactagtaccc 8754609  T
Q  129 cgg 131  Q
    |||    
T  8754608 cgg 8754606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 28587976 - 28588093
Alignment:
Q  33 aatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggg 132  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| | |||||||    
T  28587976 aatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgtttaaccaataccccggg 28588075  T
Q  133 ggcaccggttagcaggac 150  Q
      || |||||||||||||    
T  28588076 aacatcggttagcaggac 28588093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 47083118 - 47083242
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |    
T  47083118 agttaatgtattgaaattgtgtaattaattgataataaagttaaaaacagtttccttttatggtaataattcccttttatgatatgtttaaccaatgctc 47083217  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    | |||||||||||||| || ||||||    
T  47083218 c-ggggcaccggttagtagaacccta 47083242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 43594159 - 43594063
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg 125  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  43594159 agttaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttcctcttatgataataattctcttttatggtatgcttaaccagtg 43594063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 5729409 - 5729531
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| |||||||| |||||||||||| ||||||| |||||||| | ||| ||||||| |||||||||| ||||||||| ||||||||||||||||     
T  5729409 agttaatgtattgaaataatgtaattaattgataataaagtcaaaaataattttcttttatagtaataattctcttttatggcatgcttaaccagtgcct 5729508  T
Q  129 cgggggcaccggttagcaggacc 151  Q
    ||| ||||| |||||||||||||    
T  5729509 cggaggcacaggttagcaggacc 5729531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 46716703 - 46716825
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||| |||||| |||| |||    
T  46716703 ttaatgcactgaaattatgtaattaatttataataaagtcaaaaatattttccttttatgataataattcccttttatggtatgtttaaccggtgctccg 46716802  T
Q  131 ggggcaccggttagcaggaccct 153  Q
      |   |||||||||||||||||    
T  46716803 aagatcccggttagcaggaccct 46716825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 11686447 - 11686324
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacag--tttccttttatggtaataattcccttttatggtatgcttaaccagtgc 126  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||  |||  ||||||||||||||||| |||||||| ||||||||||| ||      
T  11686447 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttttatggtaataattctcttttatgatatgcttaacctgt-a 11686349  T
Q  127 cccgggggcaccggttagcaggacc 151  Q
    ||||| |||||||||||||||||||    
T  11686348 cccggaggcaccggttagcaggacc 11686324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 37674227 - 37674105
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||  | ||   ||||||||||||||||||||||| ||    
T  37674227 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgatataattttttttttatggtatgcttaaccagtgtcc 37674128  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
      |||||||||||||||||||||||    
T  37674127 --ggggcaccggttagcaggaccct 37674105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 18117206 - 18117329
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||||||||  |||||| ||||||||| | ||||||||||||||||||||||| ||    
T  18117206 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttatagtaataatttcattttatggtatgcttaaccagtg-cc 18117304  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | || ||||| ||||| ||||||||    
T  18117305 ctggagcaccagttagtaggaccct 18117329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 1737043 - 1737160
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||  ||||||||||| ||||||| || ||||||| ||||| |||||| |||||||| | ||||||||||||||||||||||||||    
T  1737043 agttaatgcattgaaatagtgtaattaattgataataaagttaaaaacattttccatttatgataataatt-cattttatggtatgcttaaccagtgccc 1737141  T
Q  129 cgggggcaccggttagcag 147  Q
    |||  ||||||||||||||    
T  1737142 cggaagcaccggttagcag 1737160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 28262098 - 28262207
Alignment:
Q  38 attgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcac 137  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||  |||||||||||||||||||| ||||| ||  ||||    
T  28262098 attgaaattatgtaattaattgataataaaatcaaaaacagtttccttttatagtaataattcttttttatggtatgcttaaccaatgccctggaagcac 28262197  T
Q  138 cggttagcag 147  Q
    |||| |||||    
T  28262198 cggtcagcag 28262207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 47657045 - 47657139
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    |||||||||||||||| ||||||||||||||||||| || |||| ||||||  |||||||||||||||||||||||||||||||||||| |||||||    
T  47657045 ttaatgcattgaaattgtgtaattaatttataataaagttaaaagcagttt--ttttatggtaataattcccttttatggtatgcttaatcagtgcc 47657139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 33636517 - 33636613
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    ||||| |||||||||| ||||||||||||||||||| || ||||| |||||  |||||||||||||||||  |||||||||||||||||||||||||    
T  33636517 ttaattcattgaaattgtgtaattaatttataataaagtaaaaaatagtttatttttatggtaataattctattttatggtatgcttaaccagtgcc 33636613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 23357812 - 23357711
Alignment:
Q  50 taattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 149  Q
    |||||||||||||| || |||||||||||||||| |||||| ||||||||| ||| |||| ||||||||||||||||||||| | ||||| |||||| ||    
T  23357812 taattaatttataaaaaagtcaaaaacagtttccatttatgataataattctcttctatgatatgcttaaccagtgccccggagacaccgattagcaaga 23357713  T
Q  150 cc 151  Q
    ||    
T  23357712 cc 23357711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 27456236 - 27456175
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatg 90  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  27456236 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatg 27456175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 38128406 - 38128479
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||| |||| |||||| | |||||||||||||||||||||| |||||||||||||| ||||||    
T  38128406 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggaggcaccggttagcatgaccct 38128479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 22739886 - 22740010
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatg-tcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    |||||||||||||||||| |||||||||||||||| ||   | ||||||||||| |||||||||||||||||   |||| | ||||||||| | ||||||    
T  22739886 agttaatgcattgaaattgtgtaattaatttataaaaaaaattaaaaacagttttcttttatggtaataattttatttttttgtatgcttagctagtgcc 22739985  T
Q  128 ccgggggcaccggttagcaggaccc 152  Q
     | |||| ||||||||||| |||||    
T  22739986 tccggggtaccggttagcatgaccc 22740010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 34546437 - 34546373
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||    
T  34546437 agttaatgcattgaaattgtgtaattaatttatagtaaagtcaaaaacagtttacttttatggta 34546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 37631663 - 37631604
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatg 90  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  37631663 ttaatgcattaaaattatgtaattaatttataataaaatcaaaaacagtttccttttatg 37631604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 18220791 - 18220691
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||| || |||||| |||||||||||||||| |||| |||||| ||||| ||||||||||||||| | |||||| |||||| ||||| | ||||||||    
T  18220791 ttaatgtatagaaattgtgtaattaatttataa-aatggcaaaaatagttttcttttatggtaataaattccttttttggtatccttaatcggtgccccg 18220693  T
Q  131 gg 132  Q
    ||    
T  18220692 gg 18220691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 34556959 - 34556877
Alignment:
Q  83 cttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaattttaatgagga 167  Q
    |||||| ||||| |||| |||||| | |||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||    
T  34556959 cttttagggtaagaatttcctttttttgtatgcttaaccagtgccc--ggggcaccggttagcatgaccctaattttaattagga 34556877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 29835827 - 29835704
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttcctttt-atggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    |||||||| ||| |||||  ||||||||||| |||||| || |||||||||||  |||| |||||||||||||  ||||||||||||||||| | |||||    
T  29835827 agttaatgtattaaaattgcgtaattaatttgtaataaagttaaaaacagttttttttttatggtaataattctattttatggtatgcttaa-ctgtgcc 29835729  T
Q  128 ccgggggcaccggttagcaggaccc 152  Q
     ||||  ||||||||||| ||||||    
T  29835728 tcgggaacaccggttagcgggaccc 29835704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 47118100 - 47118041
Alignment:
Q  41 gaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattc 100  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  47118100 gaaattgtgtaattaatttataataaagtcaagagcagtttccttttatggtaataattc 47118041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 13556479 - 13556553
Alignment:
Q  33 aatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttat 108  Q
    |||||||||||||| |||||||||||||||| || ||||| |||| | || |||||||||||||||| ||||||||    
T  13556479 aatgcattgaaattgtgtaattaatttataa-aaagtcaataacaatatctttttatggtaataatttccttttat 13556553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18470063 - 18469993
Alignment:
Q  28 cagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatt 99  Q
    |||||||| |||||||||| |||||||||||||| | || ||||||||||||| | ||||||||||||||||    
T  18470063 cagttaatacattgaaattgtgtaattaatttatga-aaagtcaaaaacagttacattttatggtaataatt 18469993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 19434608 - 19434680
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||| ||||  ||||| | |||||||||||||||| ||||||||||||||| |||| ||||||    
T  19434608 ttccttttatggtaagaattttctttttttgtatgcttaaccagtg-cccgggggcaccggtcagcatgaccct 19434680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 6097451 - 6097523
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||| |||| |||||| |  ||||||||||| ||||||||| ||||| |||||||| |||||    
T  6097451 ttccttttatggtaagaatttcctttttttatatgcttaacccgtgccccggaggcactggttagcatgaccc 6097523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 159
Target Start/End: Original strand, 36437443 - 36437568
Alignment:
Q  32 taatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgg 131  Q
    |||| |||||||||| | |||||||||||||| || |||||||| ||||| |||||||| |||||| | | |||| | |||| |||||||  || |||      
T  36437443 taattcattgaaattgtttaattaatttataa-aaagtcaaaaatagttttcttttatgataataacttctttttttagtatccttaacc-ctgtcccat 36437540  T
Q  132 gggcaccggttagcaggaccctaatttt 159  Q
    ||||||||||||||| ||||||| ||||    
T  36437541 gggcaccggttagcatgaccctattttt 36437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 36786057 - 36786095
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  36786057 cttaaccagtgccccgggggcaccggttagcagcaccct 36786095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 4087686 - 4087781
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaat-aattcccttttatggtatgcttaaccagtg 125  Q
    |||||||||||||||||  ||| |||||||||||| | | ||||||||||||| ||||||||||||| || | |||||| ||||||| ||||| ||||    
T  4087686 agttaatgcattgaaatagtgtgattaatttataa-agtttcaaaaacagttt-cttttatggtaataaaattccttttttggtatgtttaactagtg 4087781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 30924062 - 30923987
Alignment:
Q  80 ttccttttatggtaataattcccttttatg--gtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||| |||| |||||| |   ||||||||||| ||||||||| ||||||| ||||||| ||||||    
T  30924062 ttccttttatggtaagaatttcctttttttttgtatgcttaacgagtgccccgagggcaccagttagcatgaccct 30923987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 6820026 - 6820100
Alignment:
Q  78 gtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||| |||||||||||||||| |||||| | | || ||||||||||| |||  ||||||||||||||| ||||||    
T  6820026 gtttcattttatggtaataattaccttttttagcatccttaaccagtg-ccctagggcaccggttagcatgaccct 6820100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 18485998 - 18485967
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  18485998 cttaaccagtgccccgggggcaccggttagca 18485967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 20116955 - 20117029
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattccctttt 106  Q
    |||||||||||||||| |||| | ||||| ||| || | |||||||||||| |||||||| |||||||| ||||||    
T  20116955 ttaatgcattgaaattgtgtagtaaatttttaa-aaggccaaaaacagttttcttttatgataataatttcctttt 20117029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 31320383 - 31320414
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  31320383 cttaaccagtgccccgggggcaccggttagca 31320414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 34333321 - 34333290
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  34333321 cttaaccagtgccccgggggcaccggttagca 34333290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 34546383 - 34546336
Alignment:
Q  102 cttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 149  Q
    |||||||||||| ||||| ||||||||| | |||||||||||||||||    
T  34546383 cttttatggtatacttaatcagtgccccagaggcaccggttagcagga 34546336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 35791653 - 35791684
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  35791653 cttaaccagtgccccgggggcaccggttagca 35791684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 4100645 - 4100557
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaac 120  Q
    |||||| ||| ||||||||| ||||||||||||| |  |||||||||||||   |||||| |||||||||  |||||| |||||| ||||    
T  4100645 ttaatgtattaaaattatgttattaatttataatcaaatcaaaaacagttt-tatttatgataataattcatttttatagtatgcctaac 4100557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 143
Target Start/End: Complemental strand, 30703726 - 30703698
Alignment:
Q  115 cttaaccagtgccccgggggcaccggtta 143  Q
    |||||||||||||||||||||||||||||    
T  30703726 cttaaccagtgccccgggggcaccggtta 30703698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 32805653 - 32805701
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||| |||| |||||| | |||||||||||| ||||||    
T  32805653 ttccttttatggtaagaatttcctttttttgtatgcttaaccggtgccc 32805701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 392159 - 392283
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  392159 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgccc 392258  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  392259 cgggggcaccggttagcaggaccct 392283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 32929629 - 32929507
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32929629 ttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 32929530  T
Q  131 ggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||    
T  32929529 ggggcaccggttagcaggaccct 32929507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 4215758 - 4215882
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4215758 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccc 4215857  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||| ||||||||||||||||    
T  4215858 cgggggcatcggttagcaggaccct 4215882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 3515829 - 3515952
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  3515829 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgtttaacctgtgccc 3515928  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | ||||||||||||||||||||||    
T  3515929 caggggcaccggttagcaggaccc 3515952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 32985316 - 32985191
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32985316 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccc 32985217  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||||| ||||||    
T  32985216 cgggggcaccggttagcagaacccta 32985191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 2581015 - 2581146
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| | |||    
T  2581015 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaataatttccttttatggtaataattcccttttatggtatgcttaaccaataccc 2581114  T
Q  129 cgggggcaccggttagcaggaccctaatttta 160  Q
    |||| |||||||||||||||||||||| ||||    
T  2581115 cgggagcaccggttagcaggaccctaaattta 2581146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 23402203 - 23402325
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  23402203 ttaatgcattgaaattgtgaaattaatttataataaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaacccgtgccccg 23402302  T
Q  131 ggggcaccggttagcaggaccct 153  Q
    | |||||||||||||||||||||    
T  23402303 gaggcaccggttagcaggaccct 23402325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 26467247 - 26467123
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  26467247 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgtctaaccagtgccc 26467148  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||| |||||||||||||| ||||||    
T  26467147 cggaggcaccggttagcatgaccct 26467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 12145240 - 12145117
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |    
T  12145240 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataatttccttttatagtatgcttaaccagtgctc 12145141  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| ||||||||||||||||||||    
T  12145140 cggaggcaccggttagcaggaccc 12145117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 18276738 - 18276612
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatgg---tatgcttaaccagtg 125  Q
    ||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||    
T  18276738 agttaatgcattgaatttgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataatttccttttatggtattatgcttaaccagtg 18276639  T
Q  126 ccccgggggcaccggttagcaggaccc 152  Q
    |||| ||||||||||||||||||||||    
T  18276638 cccctggggcaccggttagcaggaccc 18276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 27433555 - 27433679
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| || |||    
T  27433555 agttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacccgttccc 27433654  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||| ||||||    
T  27433655 cgggggcaccggttagcaagaccct 27433679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 12525782 - 12525911
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||| | |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  12525782 agttaatacattgaaaatgtgtaattaatttataataatgtcaaacacagtttcattttatggtaataattcccttttatgatatgcttaactagtgccc 12525881  T
Q  129 cgggggcaccggttagcaggaccctaattt 158  Q
    | |||  |||||||||||||||||||||||    
T  12525882 cagggataccggttagcaggaccctaattt 12525911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 3026132 - 3026013
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||| ||||| ||    
T  3026132 agttaatgcattgaaattgtataattaatttataataatgtcaaaaacagttttcttttatcgtaataattctcttttatggtatgcttaatcagtgtcc 3026033  T
Q  129 cgggggcaccggttagcagg 148  Q
    || |||||||||||||||||    
T  3026032 cgagggcaccggttagcagg 3026013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 2350715 - 2350832
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  2350715 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataattcccttttatgatatgcttaaccagtaccc 2350814  T
Q  129 cgggggcaccggttagca 146  Q
    ||| | ||||||||||||    
T  2350815 cggagacaccggttagca 2350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 1391301 - 1391178
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||  |    
T  1391301 agttaatgcattgaaattgtataattaatttataataaagtcaaaaacagttttcttttatgataataattcccttttatggtatgcttaaccagtgttc 1391202  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | ||  ||||||||||||||||||    
T  1391201 caggaacaccggttagcaggaccc 1391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 7851280 - 7851165
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||      
T  7851280 ttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaactcgtgcccta 7851181  T
Q  131 ggggcaccggttagca 146  Q
    | | ||||||||||||    
T  7851180 gagacaccggttagca 7851165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 35043953 - 35044074
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| |||| |||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  35043953 agttaattcattgaaattgtgta-ttaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccc 35044051  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | ||||||||||||| || |||||    
T  35044052 c-ggggcaccggttaacatgaccc 35044074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 5323465 - 5323573
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||| ||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| |    
T  5323465 ttaaagcattaaaattatgtaattaatttataataaagtcaaaaacaatttccttttatggtaataattcccttttatggtatgcgtaaccggtgccctg 5323564  T
Q  131 ggggcaccg 139  Q
    | |||||||    
T  5323565 gaggcaccg 5323573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 25165536 - 25165412
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||  ||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||| | |||||||||||| |||||    
T  25165536 agttaatatattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataataattctcttttacgatatgcttaaccaatgccc 25165437  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
     ||| ||||||||||||||||||||    
T  25165436 tgggagcaccggttagcaggaccct 25165412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 29451238 - 29451138
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  29451238 agttaatgcattgaaattgtgtaattaaattataataaagtcaaacacagtttccttttatgataataattcccttttatggtatgcttaacccgtgccc 29451139  T
Q  129 c 129  Q
    |    
T  29451138 c 29451138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 21878470 - 21878350
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||      ||||| |||||||||||||    
T  21878470 agttaatgcattgaaattatttaattaatttataataaagtcaaaaacagtttctttttatggtaataattccct------gtatgtttaaccagtgccc 21878377  T
Q  129 cgggggcaccggttagcaggaccctaa 155  Q
    | ||  |||||||||||||||||||||    
T  21878376 caggaacaccggttagcaggaccctaa 21878350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 28225285 - 28225407
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  28225285 ttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatccttaaacagtgacccg 28225384  T
Q  131 ggggcaccggttagcaggaccct 153  Q
      ||||| |||||| ||||||||    
T  28225385 aaggcacaggttagtaggaccct 28225407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 13417085 - 13416959
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataat---gtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg 125  Q
    |||||||| ||||||||| ||||||||||||||||||||   |||||||||||||| |||||||||||||||||| |||||||  |||||||||||||||    
T  13417085 agttaatgtattgaaattgtgtaattaatttataataataaagtcaaaaacagttttcttttatggtaataattctcttttataatatgcttaaccagtg 13416986  T
Q  126 ccccgggggcaccggttagcaggaccct 153  Q
     ||||| ||||||||||||| |||||||    
T  13416985 -cccggaggcaccggttagctggaccct 13416959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 31280384 - 31280501
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| ||||||||||     ||||||||||||||| |||| ||    
T  31280384 agttaatgcattgaaattgtataattaatttataataatgtcaaaaacggtttccttttatagtaataattc-----tatggtatgcttaacgagtg-cc 31280477  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| ||||||||||||||||||||    
T  31280478 cggaggcaccggttagcaggaccc 31280501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 29978297 - 29978418
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||| ||||||||||||||||  ||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| | |||     
T  29978297 ttaatgtattgaaattatgtaatatatttataataaagtcaaaaacagtttaattttatggtaataattcccttttatgatatgcttaaccagcg-ccct 29978395  T
Q  131 ggggcaccggttagcaggaccct 153  Q
    ||  |||||||||||||||||||    
T  29978396 ggaacaccggttagcaggaccct 29978418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 11115218 - 11115117
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  11115218 agttaatacattgaaattgtgtaattaatttataataat--caaaaatagttttcttttatggtaataattcccttttatgatatgtttaaccagtgccc 11115121  T
Q  129 cggg 132  Q
    ||||    
T  11115120 cggg 11115117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 34851972 - 34851849
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||| | ||||||||||| |||||||||| |||||||  |||||||||||||||  |    
T  34851972 agttaatgcattgaaattgtgtaattgatttataataaagtcaaaaataatttccttttatagtaataattctcttttataatatgcttaaccagtgttc 34851873  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| | ||||| ||||||||||||    
T  34851872 cggtgacaccgattagcaggaccc 34851849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 1840368 - 1840246
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||| ||| ||||| ||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||      
T  1840368 ttaatgtattaaaattgtgtaattaatttataataaagttaaaaacagtttcctttcatggtaataattcccttttatgatatgtttaaccagtgcccta 1840269  T
Q  131 ggggcaccggttagcaggaccct 153  Q
    |   |||||||||||| ||||||    
T  1840268 gaaacaccggttagcaagaccct 1840246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 961072 - 961164
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacc 121  Q
    |||||||||||| ||||| ||||||||||| ||||||| |||| ||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  961072 agttaatgcattaaaattgtgtaattaattgataataaagtcagaaacaatttccttttatgataataattctcttttatggtatgcttaacc 961164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 34706835 - 34706910
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaa 155  Q
    ||||||||||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  34706835 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagcaagaccctaa 34706910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 9661049 - 9661149
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||| ||||| || |||| |||||||||||||||||||||||||| ||||||  |||| |||| |||| |||    
T  9661049 agttaatgcattgaaattgtataattaatttaaaataaagttaaaagcagtttccttttatggtaataattccattttataatatgtttaatcagtaccc 9661148  T
Q  129 c 129  Q
    |    
T  9661149 c 9661149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 20898011 - 20898075
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||    
T  20898011 agttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 20898075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 23629699 - 23629607
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacc 121  Q
    |||||||| ||||||||| |||||||| |||||||||| |||||||||| ||||||||||||  |||||||  |||||||| ||| |||||||    
T  23629699 agttaatgtattgaaattgtgtaattactttataataaagtcaaaaacaatttccttttatgacaataattttcttttatgttatacttaacc 23629607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 34477673 - 34477609
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||    
T  34477673 agttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 34477609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 34396650 - 34396596
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttcc 83  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  34396650 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcc 34396596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 22417303 - 22417360
Alignment:
Q  76 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggg 133  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  22417303 cagtttccttttatgctaataattctcttttatggtatgcttaatcagtgccccgggg 22417360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 34712197 - 34712131
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||| |||| || ||| | ||||||||||| |||||||||||||||||||||||||    
T  34712197 ttccttttatggtaagaatttccattttttgtatgcttaactagtgccccgggggcaccggttagca 34712131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 34477620 - 34477567
Alignment:
Q  101 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||||||||    
T  34477620 ccttttatggtatgcttaacccgtgccccggaggtaccggttagcaggacccta 34477567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 28564322 - 28564388
Alignment:
Q  52 attaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 119  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| | |||||| |||||| |||||    
T  28564322 attaatttataa-aatctcaaaaacagtttccttttatggtaataaattccttttttggtatccttaa 28564388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 1127934 - 1127994
Alignment:
Q  84 ttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttag 144  Q
    ||||||||||| ||||  ||||| | ||||||||||||||||||||| |||||||||||||    
T  1127934 ttttatggtaagaattttctttttttgtatgcttaaccagtgccccgagggcaccggttag 1127994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 34494276 - 34494340
Alignment:
Q  90 ggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccta 154  Q
    ||||||||||| ||||| | ||||||||||||| | |||||| ||||||||||||||| ||||||    
T  34494276 ggtaataattctcttttgttgtatgcttaaccaataccccggaggcaccggttagcagaacccta 34494340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 8701343 - 8701382
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  8701343 cttaaccagtgccccgggggcaccggttagcagcacccta 8701382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 152
Target Start/End: Original strand, 20898064 - 20898114
Alignment:
Q  101 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  20898064 ccttttatggtatgcttaacctgtgcccc-ggggcaccggttagccggaccc 20898114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 34 - 152
Target Start/End: Complemental strand, 24227506 - 24227389
Alignment:
Q  34 atgcattgaaattatgtaattaatttataataatgtc-aaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggg 132  Q
    |||||||||| ||||||||||||||||||| || ||| ||||| ||||| |||||||| |||||| | |||||| |||||  ||||| ||||||| |       
T  24227506 atgcattgaatttatgtaattaatttataa-aaagtcaaaaaaaagttttcttttatgataataacttccttttttggtacccttaaacagtgccgc-tt 24227409  T
Q  133 ggcaccggttagcaggaccc 152  Q
    |||||||||||||| |||||    
T  24227408 ggcaccggttagcatgaccc 24227389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 13529518 - 13529554
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataata 65  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13529518 agttaatgcattgaaattgtgtaattaatttataata 13529554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 392133 - 392102
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  392133 cttaaccagtgccccgggggcaccggttagca 392102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 1604034 - 1604003
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  1604034 cttaaccagtgccccgggggcaccggttagca 1604003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 27433529 - 27433498
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  27433529 cttaaccagtgccccgggggcaccggttagca 27433498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 143
Target Start/End: Complemental strand, 4215732 - 4215704
Alignment:
Q  115 cttaaccagtgccccgggggcaccggtta 143  Q
    |||||||||||||||||||||||||||||    
T  4215732 cttaaccagtgccccgggggcaccggtta 4215704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 22021733 - 22021844
Alignment:
Q  35 tgcattgaaa-ttatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggg 133  Q
    |||||||||| || ||||||||||| ||||  | ||||| || | ||||||||||||| ||||| | |||||| | ||||| ||||| ||||||| || |    
T  22021733 tgcattgaaacttgtgtaattaattcataaataagtcaacaaaa-tttccttttatggaaataaattcctttttttgtatgattaactagtgccctggag 22021831  T
Q  134 gcaccggttagca 146  Q
    ||||| |||||||    
T  22021832 gcaccagttagca 22021844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 9e-59; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 168529 - 168656
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  168529 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccaatgccc 168628  T
Q  129 cgggggcaccggttagcaggaccctaat 156  Q
    ||||||||||||||||||||||||||||    
T  168629 cgggggcaccggttagcaggaccctaat 168656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 27988622 - 27988498
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  27988622 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg-cc 27988524  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||||||||||||    
T  27988523 cgggggcaccggttagcaggacccta 27988498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 28045924 - 28045800
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28045924 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg-cc 28045826  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||||||||||||    
T  28045825 cgggggcaccggttagcaggacccta 28045800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 34228747 - 34228868
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34228747 ttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 34228846  T
Q  131 ggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||    
T  34228847 ggggcaccggttagcaggaccc 34228868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 30675695 - 30675565
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30675695 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatt-ccttttatggtatgcttaaccagtgccc 30675597  T
Q  129 cgggggcaccggttagcaggaccctaatttta 160  Q
    ||||| ||||||||||||||||| | ||||||    
T  30675596 cggggacaccggttagcaggacctttatttta 30675565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 4537867 - 4537743
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4537867 agttaatgcattgaaattatgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacctgtgccc 4537768  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | | |||||||||||||||||||||    
T  4537767 cagaggcaccggttagcaggaccct 4537743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 16888667 - 16888544
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  16888667 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattctcttttgtggtatgcttaaccaatgccc 16888568  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||||    
T  16888567 cgggggcaccggttagcaggaccc 16888544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 16394184 - 16394061
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  16394184 agttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttccttttatgctaataattctcttttatggtatgcttaaccaatgccc 16394085  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||||    
T  16394084 cgggggcaccggttagcaggaccc 16394061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 2805383 - 2805258
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||  |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2805383 agttaatgcattgaaattgtgtaattaacctataataaagtcaaaagcagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 2805284  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    ||| ||||||||||||| ||||||||    
T  2805283 cggaggcaccggttagccggacccta 2805258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 7304641 - 7304518
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||| |    
T  7304641 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgaaaataattctcttttatggtatgcttaaccagtgctc 7304542  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    |||||||||||||||| |||||||    
T  7304541 cgggggcaccggttagtaggaccc 7304518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 16890603 - 16890482
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||     
T  16890603 agttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcctttttatggtatgcttaaccggtgcct 16890504  T
Q  129 cgggggcaccggttagcaggac 150  Q
    | ||||||||||||||||||||    
T  16890503 ccggggcaccggttagcaggac 16890482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 21595909 - 21596025
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  21595909 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtattaattcccttttatggtatgcttaaccagtgtcc 21596008  T
Q  129 cgggggcaccggttagc 145  Q
    ||| | ||| |||||||    
T  21596009 cggagacactggttagc 21596025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 11112702 - 11112825
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||||||||||||| ||||||    
T  11112702 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataataattcacttttatggtatgcttaacctgtgccc 11112801  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
     |||||||| ||||||||||||||    
T  11112802 tgggggcactggttagcaggaccc 11112825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 12203917 - 12204031
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||    
T  12203917 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattcccttttatggtatgctgaaccagtgtcc 12204016  T
Q  129 cgggggcaccggtta 143  Q
    ||||| || ||||||    
T  12204017 cggggacatcggtta 12204031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 12448345 - 12448459
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||    
T  12448345 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattcccttttatggtatgctgaaccagtgtcc 12448444  T
Q  129 cgggggcaccggtta 143  Q
    ||||| || ||||||    
T  12448445 cggggacatcggtta 12448459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 13643075 - 13643203
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  13643075 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaaaaatt-ccttttatggtaataattctcttttatggtatgcttaaccagtgccc 13643173  T
Q  129 cgggggcaccggttagcaggaccctaattt 158  Q
      || |||||||||||||||||||| ||||    
T  13643174 taggagcaccggttagcaggacccttattt 13643203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 13743500 - 13743628
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  13743500 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaaaaatt-ccttttatggtaataattctcttttatggtatgcttaaccagtgccc 13743598  T
Q  129 cgggggcaccggttagcaggaccctaattt 158  Q
      || |||||||||||||||||||| ||||    
T  13743599 taggagcaccggttagcaggacccttattt 13743628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 29444263 - 29444139
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||    
T  29444263 agttaacgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgtttaaccagtgtcc 29444164  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||| ||||||| ||| |||||||||    
T  29444163 cggaggcaccgattaacaggaccct 29444139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 33357252 - 33357148
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  33357252 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaactagtgccc 33357153  T
Q  129 cgggg 133  Q
    |||||    
T  33357152 cgggg 33357148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 36730507 - 36730640
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  36730507 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattctcttttatagtatgcttaacctgtgccc 36730606  T
Q  129 cgggggcaccggttagcaggaccctaattttaatg 163  Q
    | | |||||||||||||  ||||||  ||||||||    
T  36730607 c-gtggcaccggttagccagaccctttttttaatg 36730640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 9063175 - 9063051
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||  || |||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  9063175 agttaatgcattgaaatcgtgcaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttgtgatatgcttaaccagtgccc 9063076  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||  ||||||||||||||||||||    
T  9063075 cggaagcaccggttagcaggaccct 9063051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 20831676 - 20831553
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||  | ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |    
T  20831676 agttaatgcattgaaatagtataattaatttataataaagtcaaaagcagtttccttttatggtaataattctcttttatggtatgcttaatcagtgctc 20831577  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | ||| ||||||||||||||||||    
T  20831576 ccgggacaccggttagcaggaccc 20831553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 39406904 - 39407024
Alignment:
Q  28 cagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    |||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  39406904 cagttaatgcgttaaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaactagtgcc 39407003  T
Q  128 ccgggggcaccggttagcaggac 150  Q
    ||  |||||||||||||||||||    
T  39407004 cc--gggcaccggttagcaggac 39407024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 43119280 - 43119402
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||| || ||    
T  43119280 agttaatgcattgaaattgtataattaatttataataaagtcaaaaacagttttcttttatggtgataattctcttttatggtatgcttaaccaatggcc 43119379  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | ||||||||||||||||||||||    
T  43119380 c-ggggcaccggttagcaggaccc 43119402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 4648257 - 4648381
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  |     
T  4648257 agttaatacattgaaattgtgtaattaatttataataatgtcaaaaacagtttcttttgatggtaataattcccttttatgatatgcttaaccagtatct 4648356  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
     ||| ||||||||||||| ||||||    
T  4648357 tgggagcaccggttagcatgaccct 4648381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 42035104 - 42034980
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||    
T  42035104 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgcttaacacgtgccc 42035005  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | | | ||||||||||| |||||||    
T  42035004 cagagacaccggttagcgggaccct 42034980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 9254024 - 9253907
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||    
T  9254024 agttaatgcattgaaattgtgtaattaatg-ataataaagtcaaaaacagtttccttttatagtaataattctcttttatggtatgcttaaccaatgtcc 9253926  T
Q  129 cgggggcaccggttagcag 147  Q
    | |||||||||||||||||    
T  9253925 caggggcaccggttagcag 9253907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 3930356 - 3930232
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||| || ||||||||||| ||||||| |||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||    
T  3930356 agttaatgcattgaagttgtgtaattaattgataataaagtcaaaaacagtttccttttttgataataatttccttttatgatatgcttaaccagtgccc 3930257  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | || ||| || |||||||||||||    
T  3930256 caggagcatcgattagcaggaccct 3930232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 28626831 - 28626950
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||  |    
T  28626831 agttaatgtattgaaattgtgtgattaatttataataaagtcaaaaacagtttctttttatgataataattcccttttatggtatgcttaatcagtg-tc 28626929  T
Q  129 cgggggcaccggttagcagga 149  Q
    |||| ||||||||||||||||    
T  28626930 cgggagcaccggttagcagga 28626950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 32113971 - 32114103
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttcc-ttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    |||||||||||||||||| | ||||||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||     
T  32113971 agttaatgcattgaaattgtttaattaatttataataaagtaaaaaacagtttcccttttatgataataattcccttttatagtatgtttaaccagtgct 32114070  T
Q  128 ccgggggcaccggttagcaggaccctaatttta 160  Q
    || | | ||||||||||||||||||| ||||||    
T  32114071 ccagagccaccggttagcaggacccttatttta 32114103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 9537947 - 9537824
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| |||||||||||||||||||  ||||||  |||||| |||||| ||||||||| ||||||||||||||||||||||||| ||    
T  9537947 agttaatgcattaaaattgtgtaattaatttataataaattcaaaaggagtttctttttatagtaataatttccttttatggtatgcttaaccagtgtcc 9537848  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| | ||||||||||||||||||    
T  9537847 cggagacaccggttagcaggaccc 9537824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 37373268 - 37373370
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||    
T  37373268 agttaatgcattgaaattgtgtaattaattgataataaagtcgaaaacagttttcttttatggtaataattccctttcatggtatgcttaacccgtgtcc 37373367  T
Q  129 cgg 131  Q
    |||    
T  37373368 cgg 37373370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 16785148 - 16785253
Alignment:
Q  28 cagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||| |||||| |||||    
T  16785148 cagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttataataataattctcttttatggtatgattaacccgtgcc 16785247  T
Q  128 ccgggg 133  Q
    | ||||    
T  16785248 cagggg 16785253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 22956768 - 22956893
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattccc--ttttatggtatgcttaaccagtgc 126  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||||  ||||     
T  22956768 agttaatacattaaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaaaaattcccttttttatggtatgtttaataagtg- 22956866  T
Q  127 cccgggggcaccggttagcaggaccct 153  Q
    ||||  | ||||||||| |||||||||    
T  22956867 cccgaagacaccggttaacaggaccct 22956893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 42433666 - 42433550
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||||||||||||| |||||| |||||| ||| |   ||||||    
T  42433666 agttaatgcattgaaattgtgtaattaatttataaaaa-gtcaaaaacagttttcttttatggtaataatttccttttttggtatacttcatttgtgccc 42433568  T
Q  129 cgggggcaccggttagca 146  Q
    ||| ||||||||||||||    
T  42433567 cggaggcaccggttagca 42433550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 10870415 - 10870495
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatg 109  Q
    ||||||| |||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10870415 agttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattcccttttatg 10870495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 29235298 - 29235421
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| || || |||||||||||||||||||  ||||||| || ||||||||||| |||||||| |||||||| | |||||||||||||| ||    
T  29235298 agttaatgcattaaatttgtgtaattaatttataataaaatcaaaaataggttccttttatgataataatttccttttataggatgcttaaccagtgtcc 29235397  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||  |||||||||||| |||||    
T  29235398 cgggaacaccggttagcatgaccc 29235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 40831340 - 40831463
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||| ||| |||||||||||||||||  ||||||| |||||| ||| | || |||    
T  40831340 agttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattttcttttatggtaataattttcttttatagtatgcataatctgtaccc 40831439  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
     || | ||||||||||||||||||    
T  40831440 tggagacaccggttagcaggaccc 40831463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 24843393 - 24843280
Alignment:
Q  38 attgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcac 137  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||||||||||||  |||||||| |||||||||||||||||| ||||    |||| ||||    
T  24843393 attgaaattgtgtaattaatttataataaagtcaaaatcagtttccttttatgacaataattctcttttatggtatgcttaatcagt-attcgggagcac 24843295  T
Q  138 cggttagcaggaccc 152  Q
    |||||||||||||||    
T  24843294 cggttagcaggaccc 24843280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 22451846 - 22451922
Alignment:
Q  28 cagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttt 105  Q
    ||||||||||||||||||| |||||||||||||||| || |||||||| || |||||||||||||||||||| |||||    
T  22451846 cagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaatagcttccttttatggtaataatttccttt 22451922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 2490225 - 2490147
Alignment:
Q  84 ttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaattttaat 162  Q
    ||||||||||| |||| |||||| | |||||||||||| ||||| |||||||||||||||||| |||||| ||||||||    
T  2490225 ttttatggtaaaaatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgacccttattttaat 2490147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 10618125 - 10618185
Alignment:
Q  93 aataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||| ||||||||||||||||||||| ||| | | |||||||||||||||||||||||    
T  10618125 aataattaccttttatggtatgcttaacccgtgtctccggggcaccggttagcaggaccct 10618185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 34192838 - 34192902
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| | |||  ||||||||||    
T  34192838 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaataattttattttatggta 34192902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 39751543 - 39751485
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcacc 138  Q
    ||||||||||||||| |||| |||||| | |||||||||||||||||| ||||||||||    
T  39751543 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgcctcgggggcacc 39751485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 17467668 - 17467725
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttcctttta 88  Q
    |||||||||||||||| ||||||||||| |||||||  ||||||||| ||||||||||    
T  17467668 ttaatgcattgaaattgtgtaattaattgataataaaatcaaaaacaatttcctttta 17467725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 43714260 - 43714187
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||| ||||   |||| | |||||||||||||||||||| ||| |||||||||||| ||||||    
T  43714260 ttccttttatggtaaaaatttattttttttgtatgcttaaccagtgcccccgggacaccggttagcatgaccct 43714187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 9934557 - 9934612
Alignment:
Q  110 gtatgcttaaccagtgccccgggggcaccggttagcaggaccctaattttaatgag 165  Q
    ||||| |||||| |||||||||||||||||||||||||||||| | ||| ||||||    
T  9934557 gtatgtttaacccgtgccccgggggcaccggttagcaggacccaactttaaatgag 9934612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 9278275 - 9278317
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtca 71  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  9278275 agttaatgcattgaaattgtgtaattaatttataataaagtca 9278317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 45185052 - 45185090
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  45185052 cttaaccagtgccccgggggcaccggttagcagcaccct 45185090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 39206263 - 39206363
Alignment:
Q  42 aaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggt 141  Q
    ||||||| ||||||||| ||||  | ||||| || | |||| ||||||| ||| |||| |||||| | |||||||||||| ||||||| |||||||||||    
T  39206263 aaattatttaattaattcataaataagtcaacaaaactttc-ttttatgataaaaatttcctttttttgtatgcttaaccggtgcccccggggcaccggt 39206361  T
Q  142 ta 143  Q
    ||    
T  39206362 ta 39206363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 13643054 - 13643018
Alignment:
Q  110 gtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    |||| ||||||||||||||||||||||||||||||||    
T  13643054 gtatccttaaccagtgccccgggggcaccggttagca 13643018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 13743479 - 13743443
Alignment:
Q  110 gtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    |||| ||||||||||||||||||||||||||||||||    
T  13743479 gtatccttaaccagtgccccgggggcaccggttagca 13743443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 14191103 - 14191035
Alignment:
Q  59 tataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    ||||||||  |||||||||||||  ||||||| ||||||||| ||||||| ||||  ||||||||||||    
T  14191103 tataataaaatcaaaaacagttttattttatgataataattctcttttatagtatttttaaccagtgcc 14191035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 16394210 - 16394241
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  16394210 cttaaccagtgccccgggggcaccggttagca 16394241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 18955840 - 18955883
Alignment:
Q  110 gtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||    
T  18955840 gtatgcttaacccatgccccgggggcaccggttagcatgaccct 18955883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 30675721 - 30675752
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  30675721 cttaaccagtgccccgggggcaccggttagca 30675752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 30933442 - 30933376
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataat 98  Q
    |||||||||||||||| |||||||||||||||| || || ||||||| ||| |||||| | |||||||    
T  30933442 ttaatgcattgaaattgtgtaattaatttataa-aaagttaaaaacatttttcttttacgataataat 30933376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 39751621 - 39751652
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  39751621 cttaaccagtgccccgggggcaccggttagca 39751652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 43723772 - 43723733
Alignment:
Q  113 tgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  43723772 tgcttaacccgtgccccgggggcaccggttagcagcaccc 43723733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 2270639 - 2270720
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaattttaa 161  Q
    |||||||||| |||| ||||  ||||| |  |||||||||| ||||| |||| |||||||||||| | |||||| |||||||    
T  2270639 ttccttttattgtaagaattttctttttttatatgcttaacgagtgctccggaggcaccggttagtatgacccttattttaa 2270720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 15451218 - 15451255
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  15451218 cttaaccagtgccccggaggcaccggttagcagcaccc 15451255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 40268036 - 40268109
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||| |||||||| |||||| | ||||| |||||| ||||||| || ||||| |||| || ||||||    
T  40268036 ttccttttatgataataatttcctttttttgtatgtttaacccgtgccccaggagcaccagttaacatgaccct 40268109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 146
Target Start/End: Original strand, 9254069 - 9254097
Alignment:
Q  118 aaccagtgccccgggggcaccggttagca 146  Q
    |||||||||||||||||||||||||||||    
T  9254069 aaccagtgccccgggggcaccggttagca 9254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 143
Target Start/End: Complemental strand, 23722285 - 23722257
Alignment:
Q  115 cttaaccagtgccccgggggcaccggtta 143  Q
    |||||||||||||||||||||||||||||    
T  23722285 cttaaccagtgccccgggggcaccggtta 23722257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 29566819 - 29566887
Alignment:
Q  84 ttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||| ||| |||| |||||| | ||||||||||||| ||||||| | |||||| |||||| |||||    
T  29566819 ttttatgataagaatttcctttttttgtatgcttaaccactgccccgagagcaccgattagcatgaccc 29566887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 43714339 - 43714367
Alignment:
Q  117 taaccagtgccccgggggcaccggttagc 145  Q
    |||||||||||||||||||||||||||||    
T  43714339 taaccagtgccccgggggcaccggttagc 43714367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 4e-58; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 38162913 - 38163035
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38162913 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccc 38163012  T
Q  129 cgggggcaccggttagcaggacc 151  Q
    |||||||||||||||||||||||    
T  38163013 cgggggcaccggttagcaggacc 38163035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 5694384 - 5694515
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5694384 agttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctc 5694483  T
Q  129 cgggggcaccggttagcaggaccctaatttta 160  Q
    ||||||||||||||||||||||||| ||||||    
T  5694484 cgggggcaccggttagcaggacccttatttta 5694515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 18043225 - 18043349
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  18043225 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttttcttttatggtaataattctattttatggtatgcttaaccagtgccc 18043324  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  18043325 cgggggcaccggttagcaggaccct 18043349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 51065871 - 51065747
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51065871 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 51065772  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | |||||||||||||||||||||||    
T  51065771 caggggcaccggttagcaggaccct 51065747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 42770113 - 42769980
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  42770113 agttaatgcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccc 42770014  T
Q  129 cgggggcaccggttagcaggaccctaattttaat 162  Q
    ||||||||||||||||||| ||||| | ||||||    
T  42770013 cgggggcaccggttagcagaacccttaatttaat 42769980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 30294504 - 30294381
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |    
T  30294504 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgcttaacctgtgctc 30294405  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||| ||||||||||||||||||    
T  30294404 cggggacaccggttagcaggaccc 30294381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 15227804 - 15227926
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15227804 ttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 15227903  T
Q  131 ggggcaccggttagcaggaccct 153  Q
    | |||||||||||||| ||||||    
T  15227904 gaggcaccggttagcaagaccct 15227926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 12072185 - 12072060
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  12072185 agttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataattcctttttatggtatgcttaaccagtgccc 12072086  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||||| ||||||    
T  12072085 cgggggcaccggttagcagcacccta 12072060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 29657834 - 29657958
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29657834 agttaatgcattgaaattgtataattaattgataataaagtcaaaaacagtttccttttttggtaataattcccttttatggtatgcttaaccagtgccc 29657933  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
     ||||||||||||||||||||||||    
T  29657934 tgggggcaccggttagcaggaccct 29657958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 38702056 - 38701936
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||||||    
T  38702056 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagttttcttttatggtaataattc----ttatggtatgcttaaccagtgccc 38701961  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    || ||||||||||||||||||||||    
T  38701960 cgagggcaccggttagcaggaccct 38701936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 47010056 - 47010180
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  47010056 agttaatgtattgaaattgtgtaattaatttataataaattcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgctc 47010155  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | |||||||||||||||||||||||    
T  47010156 caggggcaccggttagcaggaccct 47010180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 24178586 - 24178463
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  24178586 agttaatgcattgaaattgtgtaattaatctataataaagtcaaaagcagtttccttttatggtaataatttcattttatggtatgcttaaccagtgccc 24178487  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||| ||||||    
T  24178486 cgggggcaccggttagccggaccc 24178463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 14350400 - 14350269
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  14350400 agttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacaatttccttttatggtaataattccc-ttaatggtatgcttaaccagtgccc 14350302  T
Q  129 cgggggcaccggttagcaggaccctaattttaat 162  Q
    | |||||||||||||||||||||||  |||||||    
T  14350301 c-ggggcaccggttagcaggaccctttttttaat 14350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 48383234 - 48383111
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  48383234 agttaatgtattgaaataatgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccaatgcct 48383135  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | ||||||| ||||||||||||||    
T  48383134 caggggcactggttagcaggaccc 48383111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 3097722 - 3097843
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||        
T  3097722 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaataatttccttttatggtatgcttaaccagt---a 3097818  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||||| |||||||||||||||||||    
T  3097819 cggggacaccggttagcaggaccct 3097843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 29 - 159
Target Start/End: Complemental strand, 3784836 - 3784706
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| ||    
T  3784836 agttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacaattttcttttatggtaataatttccttttatggtatgcttaacccgtgtcc 3784737  T
Q  129 cgggggcaccggttagcaggaccctaatttt 159  Q
    ||||||||||||||||| |||||||| ||||    
T  3784736 cgggggcaccggttagccggaccctattttt 3784706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 45449367 - 45449239
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||  ||||||||| ||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  45449367 agttaatgcattaaaatagtgtaattaaattataataaagtcaaaagcagtttccttttatggtaataattgccttttatggtatgtttaaccagtgccc 45449268  T
Q  129 cgggggcaccggttagcaggaccctaatt 157  Q
    | |||||| ||||||||||||||||||||    
T  45449267 caggggcatcggttagcaggaccctaatt 45449239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 13961274 - 13961396
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||| |    
T  13961274 agttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttcattttatggtaataattttcttttatggtatgcttaaccagtgctc 13961373  T
Q  129 cgggggcaccggttagcaggacc 151  Q
    |  ||||||||||||||||||||    
T  13961374 caagggcaccggttagcaggacc 13961396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 37 - 159
Target Start/End: Complemental strand, 19031930 - 19031808
Alignment:
Q  37 cattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggca 136  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||| | ||    
T  19031930 cattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataatttccttttatgatatgcttaacccgtaccccggagaca 19031831  T
Q  137 ccggttagcaggaccctaatttt 159  Q
    |||||||||||||||||| ||||    
T  19031830 ccggttagcaggaccctactttt 19031808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 9266849 - 9266728
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||     
T  9266849 ttaatgcattgaaattgtgtaattaattcataataaagtcaaaaacagtttccttttatggtaataattcgcttttatggtatacttaaccagtgctcca 9266750  T
Q  131 ggggcaccggttagcaggaccc 152  Q
    |  |||||||||||||||||||    
T  9266749 gaagcaccggttagcaggaccc 9266728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 17333405 - 17333283
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||  |||||||| |||||    
T  17333405 agttaatgcattgaaattgtgtaattaattcataataaagtcaaaaacagtttccttttatgataatacttcccttttatggta--cttaaccaatgccc 17333308  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||| |||||||||||||||||||||    
T  17333307 cggaggcaccggttagcaggaccct 17333283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 41730373 - 41730494
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||     
T  41730373 ttaatgcattgaaattgtttaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaacaagtgcccca 41730472  T
Q  131 ggggcaccggttagcaggaccc 152  Q
    |  |||| ||||||||||||||    
T  41730473 gaagcactggttagcaggaccc 41730494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 6770400 - 6770525
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||  ||    
T  6770400 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatgataataattcccttttatgatatgcttaaccagtatcc 6770499  T
Q  129 cgggggcaccggttagcaggaccctaattt 158  Q
    |    |||||||||||||||||||||||||    
T  6770500 c----gcaccggttagcaggaccctaattt 6770525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 30657671 - 30657788
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||      ||| ||||||||||||||||||||||||||||||||| |||    
T  30657671 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttt------atgataataattcccttttatggtatgcttaaccagtaccc 30657764  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| ||||||| ||||||||||||    
T  30657765 cggaggcaccgattagcaggaccc 30657788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 36446448 - 36446352
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg 125  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  36446448 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatagtaataattcccttttatggtatgtttaaccagtg 36446352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 50128295 - 50128171
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| || |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||    
T  50128295 agttaatgcattgaaattgtgtaattaatttataataaagttaaaagcagtttcattttatggtaataattctcttttatggtatgcttaaccagtgtcc 50128196  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | |   |||||||||||||||||||    
T  50128195 cagaaacaccggttagcaggaccct 50128171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 43286785 - 43286911
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacca--gtgc 126  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||  ||||    
T  43286785 agttaatgttttgaaattatgtaattaatttataataaagtcaaaaatagtttccttttatagtaataattctcttttatggtatgcttaaccagtgtgc 43286884  T
Q  127 cccgggggcaccggttagcaggaccct 153  Q
      |||||||| ||||||||||||||||    
T  43286885 ttcgggggcatcggttagcaggaccct 43286911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 51368908 - 51368810
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  51368908 agttaatgcattgaaattgtgtagttaatttataataatgtcaaaaatagtttccttttatagtaataattccattttatggtatgcttaaccagtgcc 51368810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 12306980 - 12307077
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgc 126  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  12306980 agttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagattccttttatggtaataattctcttttatggtatgcttaaccagtgc 12307077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 8473037 - 8472913
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||  ||||||||| |||||||||||| ||||||||||| ||    
T  8473037 agttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacagtttcattttataataataattctcttttatggtatacttaaccagtgtcc 8472938  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    || ||  ||||||||||||||||||    
T  8472937 cgaggataccggttagcaggaccct 8472913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 35985744 - 35985644
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  35985744 agttaatgcattgaaattgtgtaattaatttataataaagtgaaaaacagtttccttttatggtaataattcccatttatagtatacttaaccagtgccc 35985645  T
Q  129 c 129  Q
    |    
T  35985644 c 35985644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 45431341 - 45431465
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  45431341 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataattctcttttatgatatacttaaccagtgccc 45431440  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | | | | ||||||| |||||||||    
T  45431441 cagagactccggttatcaggaccct 45431465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 48071545 - 48071642
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgc 126  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||| ||||    
T  48071545 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattatcttttatagtatgcttaaccggtgc 48071642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 30217825 - 30217946
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||||||||||| ||||||||    
T  30217825 agttaatgcatttaaattatttaattaatttataataaagtcaaaaatagttttcttttatggtaataatttctttttatggtatgcttaa-cagtgccc 30217923  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | | |||||| |||||||||||||    
T  30217924 c-gaggcacctgttagcaggaccc 30217946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 52431644 - 52431761
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttat-ggtatgcttaaccagtgcc 127  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| || ||| ||||||||||||||||| |||||| | |||||||||||||||||||    
T  52431644 agttaatgcattgaaattgtgtaattaatttataa-aatgtcaaaagcaattttcttttatggtaataatttcctttttttggtatgcttaaccagtgcc 52431742  T
Q  128 ccgggggcaccggttagca 146  Q
    || ||| ||||||||||||    
T  52431743 ccagggacaccggttagca 52431761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 29683259 - 29683355
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg 125  Q
    |||||||||||||||||  | ||||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  29683259 agttaatgcattgaaatcgtataattaatttataataaagtcaaaaacagtttcattttatagtaataattcacttttatggtatgcttaaccagtg 29683355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 47532793 - 47532662
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||  ||||||| |||||||| | |||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  47532793 agttaatgcattgaaattgtgtaattaatg-ataataaagtcaaaaataatttccttttataataataattcccttttatggtatgcttaaccaatgccc 47532695  T
Q  129 cgggggcaccggttagcaggaccctaattttaa 161  Q
    ||  | |||||||||||| ||||| ||| ||||    
T  47532694 cgaagacaccggttagcaagacccaaatattaa 47532662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 23473588 - 23473464
Alignment:
Q  28 cagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    ||||||||| ||||||||| | ||||||||||||||||| ||  ||| |||||||||||||||||||||||| | ||||||  ||||||||||| ||||     
T  23473588 cagttaatgtattgaaattgtataattaatttataataaagtttaaagcagtttccttttatggtaataatttctttttataatatgcttaacctgtgct 23473489  T
Q  128 ccgggggcaccggttagcaggaccc 152  Q
    ||| ||| |||||||||||||||||    
T  23473488 ccgagggtaccggttagcaggaccc 23473464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 19010778 - 19010687
Alignment:
Q  61 taataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||| |||||||    
T  19010778 taataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgattaaccagtgccccaggaacaccggttagtaggaccc 19010687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 29 - 155
Target Start/End: Original strand, 29210476 - 29210583
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||                   ||||||||||||||||||||||||    
T  29210476 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctt-------------------ttatggtatgcttaaccagtgccc 29210556  T
Q  129 cgggggcaccggttagcaggaccctaa 155  Q
    |||||||||||||||||||||||||||    
T  29210557 cgggggcaccggttagcaggaccctaa 29210583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 38335234 - 38335317
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatg 114  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||||||    
T  38335234 ttaatgcattgtaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataataattcacttttatggtatg 38335317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 37315390 - 37315300
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaac 120  Q
    ||||||||||||||||||||||||||||||||||| || |||||| ||||||| |||||||| |||||||| | |||| |||||||||||||    
T  37315390 agttaatgcattgaaattatgtaattaatttataa-aaagtcaaagacagttttcttttatgctaataatttctttttttggtatgcttaac 37315300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 28725977 - 28725905
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||| |||| |||||| | |||||||||||||||||||||||| |||||||||||| |||||    
T  28725977 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccggggacaccggttagcaagaccc 28725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 3838900 - 3838783
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataa-ttcccttttatggtatgcttaaccagtgcc 127  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||| || |||  |||||||| ||||| |||| |||| | |||||||||| |||| ||    
T  3838900 agttaatgcattaaaattgtgtaattaatttataa-aatgtcaaaagcaatttttttttatggcaataatttcctttttttagtatgcttaatcagtacc 3838802  T
Q  128 ccgggggcaccggttagca 146  Q
    ||| ||||||| |||||||    
T  3838801 ccgagggcaccagttagca 3838783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 21112732 - 21112678
Alignment:
Q  101 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaa 155  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  21112732 ccttttatggtatgcttaactagtgccccgagggcaccggttagcaggaccctaa 21112678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 21117474 - 21117420
Alignment:
Q  101 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaa 155  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  21117474 ccttttatggtatgcttaacttgtgccccgagggcaccggttagcaggaccctaa 21117420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 26228256 - 26228365
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||||||||||||||||||||||||  |||||               ||||||||||||||||||||||||||||||||  || | |    
T  26228256 agttaatgcattgaaattatgtaattaatttataataaaatcaaa---------------tggtaataattcccttttatggtatgcttaactggtactc 26228340  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||||| |||||||||||| ||||||    
T  26228341 cggggacaccggttagcatgaccct 26228365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 30664239 - 30664173
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||| |||| | |||| | ||||||||||||||||||||| |||||||||||||||    
T  30664239 ttccttttatggtaagaatttcttttttttgtatgcttaaccagtgccccgtgggcaccggttagca 30664173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 14881081 - 14881036
Alignment:
Q  50 taattaatttataataatgtcaaaaacagtttccttttatggtaat 95  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  14881081 taattaatttataataaagtcaaaaacagtttccttttatggtaat 14881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 39081864 - 39081980
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| | |||||||||||||| ||| | |||| ||||||| ||||||| ||||||||  ||||| |  ||||||||| |||| ||     
T  39081864 agttaatgtattgaaattttataattaatttataa-aatattaaaagcagtttcattttatgataataattttcttttttaatatgcttaatcagtacct 39081962  T
Q  129 cgggggcaccggttagca 146  Q
    |||||| |||||||||||    
T  39081963 cgggggtaccggttagca 39081980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 38595824 - 38595752
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||| ||||  ||||| | | |||||||||||||||||||| |||||||||||||| |||||    
T  38595824 ttccttttatggtaagaattttctttttttgcatgcttaaccagtgccccggaggcaccggttagcatgaccc 38595752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 52749665 - 52749757
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacc 121  Q
    |||||||| ||||||||| | || | |||||| ||||| || ||||||| |||  |||||||||||||||||| |||||||||||| ||||||    
T  52749665 agttaatgtattgaaattgtatactaaatttacaataaagttaaaaacaatttttttttatggtaataattcctttttatggtatgtttaacc 52749757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 10679629 - 10679704
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaa 155  Q
    ||||||||||||||| |||| | |||| | |||||||||||  ||| |||||||||||||||||||| ||||||||    
T  10679629 ttccttttatggtaaaaatttcttttttttgtatgcttaacaggtgtcccgggggcaccggttagcatgaccctaa 10679704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 23822593 - 23822517
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaattt 158  Q
    ||||||||||||||| ||||   |||| | ||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  23822593 ttccttttatggtaagaattt--tttttttgtatgcttaaccaatgccccgggggcaccggttagcatgacccaaattt 23822517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 37503277 - 37503361
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatg 114  Q
    ||||||| |||||||||| |||||||||||||||| ||  ||||||| | |||||||||||||||| ||||  ||||| |||||||    
T  37503277 agttaatacattgaaattgtgtaattaatttataa-aaaatcaaaaatattttccttttatggtaacaattgtcttttttggtatg 37503361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 39497370 - 39497430
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttat 89  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||| | ||| |||||||    
T  39497370 agttaatgcattaaaattatataattaatttataataaagtcaaaaataattttcttttat 39497430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 15282637 - 15282518
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||  ||||||||| ||||||||||||||||||| |||||||| |       |||||| |||||||||||| |||| |||||||||| ||||||||    
T  15282637 agttaatatattgaaattgtgtaattaatttataataaagtcaaaaaaa----taatttatgataataattccctattattgtatgcttaa-cagtgccc 15282543  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
     ||   ||||||||||||| |||||    
T  15282542 tggaaacaccggttagcagaaccct 15282518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 11797050 - 11796970
Alignment:
Q  72 aaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    |||| |||||| |||||||||||||| | |||||| |||||| |||||| ||||||||  || |||||||||||| ||||||    
T  11797050 aaaaaagtttcgttttatggtaataacttccttttttggtatccttaactagtgcccc-aggacaccggttagcatgaccct 11796970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 28481973 - 28482030
Alignment:
Q  95 taattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccta 154  Q
    ||||||| ||||||||||||||||||| || |||  |||||||||||||| |||||||||    
T  28481973 taattcctttttatggtatgcttaacccgtaccc--ggggcaccggttagtaggacccta 28482030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 28726034 - 28726086
Alignment:
Q  94 ataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    |||||| |||||| |  ||| ||||||||||||||||||||||||||||||||    
T  28726034 ataatttccttttttattatccttaaccagtgccccgggggcaccggttagca 28726086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 27457022 - 27456943
Alignment:
Q  80 ttccttttatggtaataattcccttttatg-gtatgcttaaccagtgccccgggggcaccggttagcaggaccctaattt 158  Q
    ||||||||||||||| ||||  ||||| |  ||||||||||| |||||| |||||||||| ||||||| ||| |||||||    
T  27457022 ttccttttatggtaaaaattttcttttttttgtatgcttaacgagtgcctcgggggcaccagttagcatgactctaattt 27456943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 29657808 - 29657777
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  29657808 cttaaccagtgccccgggggcaccggttagca 29657777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 38595902 - 38595933
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  38595902 cttaaccagtgccccgggggcaccggttagca 38595933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 19940585 - 19940547
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  19940585 cttaaccagtgccccgggggcaccggttaacatgaccct 19940547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 146
Target Start/End: Complemental strand, 29683231 - 29683201
Alignment:
Q  116 ttaaccagtgccccgggggcaccggttagca 146  Q
    |||||||||||||||||||||||||||||||    
T  29683231 ttaaccagtgccccgggggcaccggttagca 29683201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 146
Target Start/End: Original strand, 42770140 - 42770170
Alignment:
Q  116 ttaaccagtgccccgggggcaccggttagca 146  Q
    |||||||||||||||||||||||||||||||    
T  42770140 ttaaccagtgccccgggggcaccggttagca 42770170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 48282896 - 48282858
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  48282896 cttaaccagtgccccgggggcaccggttaacaagaccct 48282858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 16590325 - 16590269
Alignment:
Q  42 aaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatt 99  Q
    ||||| |||||||||||||||| ||||||| ||||| ||| |||||||| ||||||||    
T  16590325 aaattgtgtaattaatttataa-aatgtcagaaacaattttcttttatgataataatt 16590269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 19011090 - 19011057
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttata 62  Q
    |||||||||||||||||| |||||||||||||||    
T  19011090 agttaatgcattgaaattgtgtaattaatttata 19011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 19068089 - 19068052
Alignment:
Q  123 gtgccccgggggcaccggttagcaggaccctaatttta 160  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  19068089 gtgctccgggggcaccggttaacaggaccctaatttta 19068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 19115979 - 19115942
Alignment:
Q  123 gtgccccgggggcaccggttagcaggaccctaatttta 160  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  19115979 gtgctccgggggcaccggttaacaggaccctaatttta 19115942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 39497728 - 39497789
Alignment:
Q  91 gtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||| |||||||| ||||||||||||| |||||| | | | |||||||||| |||||    
T  39497728 gtaataatttccttttattgtatgcttaaccaatgccccagagactccggttagcaagaccc 39497789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 45225232 - 45225183
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccctaattttaatga 164  Q
    ||||||||||| ||||  ||||||||||||||| ||||| ||||||||||    
T  45225232 cttaaccagtgtcccgaaggcaccggttagcagcacccttattttaatga 45225183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 19940685 - 19940713
Alignment:
Q  115 cttaaccagtgccccgggggcaccggtta 143  Q
    |||||||||||||||||||||||||||||    
T  19940685 cttaaccagtgccccgggggcaccggtta 19940713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 29210450 - 29210406
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccctaatttt 159  Q
    ||||||||||||||||| ||||||||||||||   ||||||||||    
T  29210450 cttaaccagtgccccggaggcaccggttagcatttccctaatttt 29210406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 16536111 - 16536244
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  16536111 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattctattttatggtattcttaaccagtgccc 16536210  T
Q  129 cgggggcaccggttagcaggaccctaattttaat 162  Q
    ||||||||||||||||||||||||| ||||||||    
T  16536211 cgggggcaccggttagcaggacccttattttaat 16536244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 4268945 - 4268822
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  4268945 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgattaaccagtgccc 4268846  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    || |||||||||||||||||||||    
T  4268845 cgagggcaccggttagcaggaccc 4268822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 4089205 - 4089334
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  4089205 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattctcttttatggtatgtttaaccagtgccc 4089304  T
Q  129 cgggggcaccggttagcaggaccctaattt 158  Q
    | |||||||| |||||||||||||| ||||    
T  4089305 caggggcaccagttagcaggacccttattt 4089334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 29591252 - 29591376
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  29591252 agttaatgcattgaaattgtgtacttaatttataataaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaactagtgccc 29591351  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  29591352 cgggggcaccggttagcaggaccct 29591376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 789653 - 789530
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  789653 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtagcc 789554  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | | ||||||||||||| ||||||    
T  789553 cagaggcaccggttagcgggaccc 789530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 43944570 - 43944692
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  43944570 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttgtatggtatgcttaaccagtg-cc 43944668  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    || ||||||||||||||| |||||    
T  43944669 cgagggcaccggttagcaagaccc 43944692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 7769001 - 7769125
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||    
T  7769001 agttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttccttttatggtaataattctcttttatggcatacttaacccgtgccc 7769100  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  7769101 cgggggcaccggttagcaggaccct 7769125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 36395162 - 36395286
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  36395162 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagttttcttttatgataataattcccttttatggtatgcttaaccagtgccc 36395261  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
     ||||||||| ||||||||||||||    
T  36395262 tgggggcaccagttagcaggaccct 36395286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 12356307 - 12356430
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |    
T  12356307 agttaatacattgaaattatataattaatttataataaagtcaaaaacagtttccttttatgataataattctcttttatggtatgcttaaccagtgttc 12356406  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||||    
T  12356407 cgggggcaccggttagcaggaccc 12356430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 31 - 154
Target Start/End: Original strand, 16820917 - 16821040
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||| ||||||||| |||| |  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16820917 ttaatgcattgaaattctgtaattaacttataataaagtcatacgcagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccg 16821016  T
Q  131 ggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||||||||||    
T  16821017 ggggcaccggttagcaggacccta 16821040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 43202504 - 43202374
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  43202504 ttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacagttttcttttatggtaataattctcttttatggtaagcttaaccagtg-cccg 43202406  T
Q  131 ggggcaccggttagcaggaccctaattttaat 162  Q
    |||||||||||||||||||||||  |||||||    
T  43202405 ggggcaccggttagcaggaccctttttttaat 43202374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 33108796 - 33108670
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||  | ||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  33108796 agttaatgcattgaaatagtataattaattgataataaagtcaaaaacagtttccttttatggtaataattcctttttatggtatgcttaacccgtgccc 33108697  T
Q  129 cgggggcaccggttagcaggaccctaa 155  Q
    ||| |||||||||||||||||||||||    
T  33108696 cggaggcaccggttagcaggaccctaa 33108670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 18068002 - 18067878
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| || |||    
T  18068002 agttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacccgttccc 18067903  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||| ||||||    
T  18067902 cgggggcaccggttagcaagaccct 18067878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 50619149 - 50619272
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  50619149 agttaatgcattgaaattgtgtacttaatttataataaagtaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg-cc 50619247  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | ||||||||||||||| |||||||    
T  50619248 caggggcaccggttagcgggaccct 50619272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 6164156 - 6164279
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  6164156 agttaatgcattgaaattgtgtaattaatttataataaagcaaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtaccc 6164255  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    || || ||||||||||||||||||    
T  6164256 cgaggacaccggttagcaggaccc 6164279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 54897371 - 54897494
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| ||    
T  54897371 agttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttccttttatggtaataatttccttttatggtatgtttaaccagtgtcc 54897470  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| ||||||||||||||||||||    
T  54897471 cggaggcaccggttagcaggaccc 54897494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 32217108 - 32217231
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||    
T  32217108 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttt-ttttatgataataattcccttttatggtatgcttaacctgtgccc 32217206  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||| ||||||||||| |||||||||    
T  32217207 cggaggcaccggttaacaggaccct 32217231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 15186306 - 15186423
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||      ||||||||||||    
T  15186306 agttaatccattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattccattttatgg------taaccagtgccc 15186399  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||| ||||||||    
T  15186400 cgggggcaccggttaacaggaccc 15186423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 55882748 - 55882869
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| ||||| |||||||||||| ||||||| ||||| ||    
T  55882748 ttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaa-aattcacttttatggtatacttaacccgtgcctcg 55882846  T
Q  131 ggggcaccggttagcaggaccct 153  Q
    |||||||||||||| ||||||||    
T  55882847 ggggcaccggttagtaggaccct 55882869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 19503228 - 19503107
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||     
T  19503228 agttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttattgtaataattcccttttatggtatgcttaactagtacct 19503129  T
Q  129 cgggggcaccggttagcaggac 150  Q
     ||||||| |||||||| ||||    
T  19503128 tgggggcatcggttagcgggac 19503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 39877371 - 39877247
Alignment:
Q  30 gttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatgg--tatgcttaaccagtgcc 127  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||  |||||||||||||||||    
T  39877371 gttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatagtaataattctcttttatggtatatgcttaaccagtgcc 39877272  T
Q  128 ccgggggcaccggttagcaggaccc 152  Q
    |||| ||||| ||||||||||||||    
T  39877271 ccggaggcacgggttagcaggaccc 39877247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 39843970 - 39844086
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||    |||||    
T  39843970 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcctttttagggtatgcttaa----tgccc 39844065  T
Q  129 cgggggcaccggttagcaggac 150  Q
    | |||||| |||||||||||||    
T  39844066 c-ggggcatcggttagcaggac 39844086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 47231995 - 47231881
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | |||    
T  47231995 agttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaaccaataccc 47231896  T
Q  129 cgggggcaccggtta 143  Q
    |||  ||||||||||    
T  47231895 cggaagcaccggtta 47231881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 3783624 - 3783497
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgctta---accagtg 125  Q
    |||||||||||| ||||| | ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||   || ||||    
T  3783624 agttaatgcattaaaattgtttaattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaagtactagtg 3783525  T
Q  126 ccccgggggcaccggttagcaggaccct 153  Q
    ||||||| |||||||||| |||||||||    
T  3783524 ccccgggagcaccggttaacaggaccct 3783497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 30387257 - 30387132
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| || | |||    
T  30387257 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcctttttatgatatgcttaatcaataccc 30387158  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
     ||   ||||||||||||| ||||||    
T  30387157 tggaaacaccggttagcagaacccta 30387132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 37987998 - 37988122
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||| | |||    
T  37987998 agttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttccttttattgtaataattctcttttatagtatgcttaaccaatcccc 37988097  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||   ||||||||||| ||||||||    
T  37988098 cgaaagcaccggttagtaggaccct 37988122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 32202603 - 32202473
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||| || || ||    
T  32202603 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataatt-ccttttatgatatgcttaatcaatgtcc 32202505  T
Q  129 cgggggcaccggttagcaggaccctaatttta 160  Q
    | | |||||| |||| ||||||||| ||||||    
T  32202504 cagaggcaccagttaacaggacccttatttta 32202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 50603292 - 50603415
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacag-tttccttttatggtaataattcccttttatggtatgcttaaccagtgcccc 129  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  50603292 ttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttttttttttatgataataattctcttttatggtatgcttaaccagtacccc 50603391  T
Q  130 gggggcaccggttagcaggaccct 153  Q
    | |  |||| ||||||||||||||    
T  50603392 gagaacaccagttagcaggaccct 50603415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 4220258 - 4220381
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||  |||| |    
T  4220258 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttat-gtaataattcccttttatggtatgcttaacatgtgctc 4220356  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||  |||||||||||||| ||||||    
T  4220357 cgtaggcaccggttagcatgaccct 4220381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 30154286 - 30154163
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  30154286 agttaatgtattgaaattatgtaattaatttataataaaatcaaaaacaatttccttatatgataataattctcttttatggtgtgcttaaccagtgccc 30154187  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||    || |||||||||||||||    
T  30154186 cgaaaacatcggttagcaggaccc 30154163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 5091720 - 5091612
Alignment:
Q  42 aaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggt 141  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  5091720 aaattgtgtaattaatttataataaagtcataaacagtttccttttatagtaataattcccttttat-gtatgcttaaccagtg-tccgggagcaccggt 5091623  T
Q  142 tagcaggaccc 152  Q
    |||||||||||    
T  5091622 tagcaggaccc 5091612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 42898869 - 42898757
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttcctttta--tggtaataattcccttttatggtatgcttaaccagtgc 126  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| |||||| |||||  |||||||||||| ||||||||||||||||||||| ||     
T  42898869 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttctttttatgtggtaataattctcttttatggtatgcttaaccaatgt 42898770  T
Q  127 cccgggggcaccg 139  Q
    ||||||| |||||    
T  42898769 cccggggacaccg 42898757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 54655999 - 54655879
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||| ||| |||||| | ||||||||| || ||||| ||||||||||||||| ||    
T  54655999 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttaggataataattctctcttatgatatgcttaaccagtgtcc 54655900  T
Q  129 cgggggcaccggttagcaggac 150  Q
    | ||||||||||||||||||||    
T  54655899 c-ggggcaccggttagcaggac 54655879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 54945902 - 54945780
Alignment:
Q  28 cagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||| |||||||| ||||||||||| ||||||||||||     
T  54945902 cagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaatttcgttttatggt-ataattcctttttatggtatacttaaccagtgct 54945804  T
Q  128 ccgggggcaccggttagcaggaccc 152  Q
    || ||  ||||||||||||||||||    
T  54945803 cc-ggaacaccggttagcaggaccc 54945780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 31 - 138
Target Start/End: Original strand, 46149004 - 46149111
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||||| ||||||||||||| |||||||||| | ||    
T  46149004 ttaatacattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaataattctcttttatggtatgtttaaccagtgtctcg 46149103  T
Q  131 ggggcacc 138  Q
     |||||||    
T  46149104 agggcacc 46149111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 28755683 - 28755811
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| || | |||||||||||||||||| ||||| || |||||||| ||||||||||||  |||||    
T  28755683 agttaatgcattgaaattgtgtaattaattgataataaagttagaaacagtttccttttatgataatactt-ccttttatagtatgcttaacccatgccc 28755781  T
Q  129 cgggggcaccggttagcaggaccctaatttt 159  Q
    | | | ||||||||||||||||| |||||||    
T  28755782 c-gagacaccggttagcaggaccttaatttt 28755811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 31680586 - 31680484
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||| |||| |||||| ||| ||    
T  31680586 agttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttccttttatggtaataattcatttttatgatatgtttaacccgtgtcc 31680487  T
Q  129 cgg 131  Q
    |||    
T  31680486 cgg 31680484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 53656001 - 53655887
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| || ||||| | |||  |||||||||||||||| | ||||||||||||||||| |||||||     
T  53656001 agttaatgtattgaaattgtgtaattaatttataataaagttaaaaataattttattttatggtaataatttcattttatggtatgcttaatcagtgcct 53655902  T
Q  129 cgggggcaccggtta 143  Q
    ||| |||||||||||    
T  53655901 cggaggcaccggtta 53655887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 52533908 - 52533816
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacc 121  Q
    |||||||||| |||||||   ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52533908 agttaatgcactgaaattgaataattaattgataataaagtcgaaaacagtttccttttatggtaataattcccttttatggtatgtttaacc 52533816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 24679765 - 24679671
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    |||||||| ||||||||| ||||||||||||||||||| || ||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||    
T  24679765 agttaatgtattgaaattgtgtaattaatttataataaagttaaaaacaatttcc-tttatggtaataattctcttttatggtatgcttaatcagt 24679671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 31517228 - 31517352
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagt-ttccttttatggtaataattcccttttatggtatgcttaaccagtgcc 127  Q
    |||||||||||||||||  ||||||||||| ||||||| |||||||| | | ||  ||||||||||||||||| ||| |||||||||||||||||||| |    
T  31517228 agttaatgcattgaaatagtgtaattaattgataataaagtcaaaaataatgttttttttatggtaataattctcttatatggtatgcttaaccagtg-c 31517326  T
Q  128 ccgggggcaccggttagcaggaccct 153  Q
    | |||||||||| |||| ||||||||    
T  31517327 ctgggggcaccgattagaaggaccct 31517352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 53004060 - 53003955
Alignment:
Q  48 tgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcag 147  Q
    |||||||||| |||||||| |||||||| | ||||||||||   ||||||||| |||||||| ||||||||| ||||| ||| ||| |||||||||||||    
T  53004060 tgtaattaatgtataataaagtcaaaaataatttccttttaaaataataattctcttttatgatatgcttaatcagtgtccccgggacaccggttagcag 53003961  T
Q  148 gaccct 153  Q
    ||||||    
T  53003960 gaccct 53003955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 46688328 - 46688264
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  46688328 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatggta 46688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 41265522 - 41265620
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||| ||||||| |||||||||||||||| ||  ||||||||||||| ||||||| |||||||||  ||||| ||||||| |||||||||||||    
T  41265522 agttaatgcagtgaaattgtgtaattaatttataaaaaa-tcaaaaacagttttcttttattgtaataattttcttttttggtatgtttaaccagtgccc 41265620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 54054659 - 54054721
Alignment:
Q  96 aattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaattt 158  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  54054659 aatttccttttatggtatgcttaaccagtgccccgggggcaccggttggcaggacccttattt 54054721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 28119978 - 28119897
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaattttaa 161  Q
    ||||||||||||||| |||| |||||| | |||||||||||||||||||||| | |||||||||||| |||||||| |||||    
T  28119978 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggagacaccggttagcatgaccctaactttaa 28119897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 42815172 - 42815237
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttc-cttttatggta 93  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  42815172 agttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttctcttttatggta 42815237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 49915224 - 49915301
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttat 108  Q
    |||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||  |||||||| ||||||||    
T  49915224 ttaatgtattgaaattgtgtaattaatttataataaagtaaaaaacagtttccttttataataataatttccttttat 49915301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 37402830 - 37402757
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||| |||| |||||| || |||||||||||||||||||| ||||||||||||||| |||||||    
T  37402830 ttccttttatggtaagaatttccttttttg-tatgcttaaccagtgccccgagggcaccggttagcatgacccta 37402757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 53268783 - 53268875
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacca 122  Q
    |||||||||||| ||||| |||||||||||||||| || |||||||||| ||| |||||||  ||||||||  ||||| |||||||||||||||    
T  53268783 agttaatgcattaaaattgtgtaattaatttataa-aaagtcaaaaacaattttcttttataataataattttcttttttggtatgcttaacca 53268875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 54054611 - 54054675
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||  ||||||||||| ||||||| |||||||||| |||||||||||||||    
T  54054611 agttaatgcattgaaatagtgtaattaattgataataaagtcaaaaacaatttccttttatggta 54054675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 28120121 - 28120058
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggtta 143  Q
    ||||||||||||||| |||| |||||| | |||||||||||| |||||||||||||||||||||    
T  28120121 ttccttttatggtaagaatttcctttttttgtatgcttaacctgtgccccgggggcaccggtta 28120058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 8133789 - 8133862
Alignment:
Q  48 tgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacca 122  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||||||||  ||||||| ||||| |||||||    
T  8133789 tgtaattaatttataataaagtcaaaaatagttttcttttatggtaataattatcttttat-gtatgtttaacca 8133862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 16572555 - 16572488
Alignment:
Q  84 ttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacc 151  Q
    ||||||||||| |||| |||||| | |||| ||||| |||||||||||||||||||||||||| ||||    
T  16572555 ttttatggtaagaatttcctttttttgtatacttaatcagtgccccgggggcaccggttagcatgacc 16572488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 292229 - 292295
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||| |||| |||||| | | |||||||||| ||||||||| ||||||||||||||    
T  292229 ttccttttatggtaaaaatttcctttttttgcatgcttaacccgtgccccggaggcaccggttagca 292295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 46688275 - 46688229
Alignment:
Q  101 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcag 147  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||    
T  46688275 ccttttatggtatgcttaaccagtgctctgggggcaccggttagcag 46688229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 52697115 - 52697210
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg 125  Q
    ||||||| |||| ||||||| |||| |||||||||||| |||||||| | ||| | ||||| |||||||||| |||||||| |||| ||||| ||||    
T  52697115 agttaatacattaaaattatataat-aatttataataaagtcaaaaataattttcctttattgtaataattctcttttatgatatgtttaacgagtg 52697210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 17344781 - 17344679
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||||| ||||||| |||||| ||| | ||||| |||||| |||||||||||||| |  ||||| | |||| ||||| ||||| ||    
T  17344781 agttaatgcatttaaattatataattaaattataaaaat-ttaaaaaaagtttctttttatggtaataactttcttttcttgtatccttaaacagtgtcc 17344683  T
Q  129 cggg 132  Q
    ||||    
T  17344682 cggg 17344679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 5518954 - 5518886
Alignment:
Q  83 cttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    |||||||||||||||||  ||||| ||| || ||||||| ||||||||||||||| |||||||| |||||    
T  5518954 cttttatggtaataattttctttt-tggcatccttaacctgtgccccgggggcactggttagcatgaccc 5518886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 10426066 - 10426103
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  10426066 cttaaccagtgccccgggggcaccggttagcagcaccc 10426103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 11893442 - 11893391
Alignment:
Q  110 gtatgcttaaccagtgccccgggggcaccggttagcaggaccctaattttaat 162  Q
    |||||||||||||||||||| || ||||||||||||| |||||||| ||||||    
T  11893442 gtatgcttaaccagtgcccc-ggagcaccggttagcatgaccctaaatttaat 11893391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 4268971 - 4269002
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  4268971 cttaaccagtgccccgggggcaccggttagca 4269002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 15186280 - 15186249
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  15186280 cttaaccagtgccccgggggcaccggttagca 15186249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 18068028 - 18068059
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  18068028 cttaaccagtgccccgggggcaccggttagca 18068059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 54897345 - 54897314
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  54897345 cttaaccagtgccccgggggcaccggttagca 54897314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 146
Target Start/End: Complemental strand, 1432650 - 1432554
Alignment:
Q  51 aattaatttataataatgtcaaaaacagtttccttttatggtaat--aattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||  | ||||||||||| |||||||| ||||  ||||| |||||||  |||||||||||||| || | |  |||||||||||||    
T  1432650 aattaatttataataaaataaaaaacagttt-cttttatgataataaaattctcttttataatatgcttaaccagtacctcagaagcaccggttagca 1432554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 50167652 - 50167685
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttata 62  Q
    |||||||||||||||||| |||||||||||||||    
T  50167652 agttaatgcattgaaattgtgtaattaatttata 50167685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 8749908 - 8749795
Alignment:
Q  42 aaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatg---gtatgcttaaccagtgccccgggggcacc 138  Q
    ||||| |||||||||| |||||  | ||||| || ||||| || |||||||||||| | |||||| |    |||||||||||| |||||||  |||||||    
T  8749908 aaattgtgtaattaatctataaataagtcaacaa-agttttctattatggtaataaattccttttttttttgtatgcttaacccgtgccccaagggcacc 8749810  T
Q  139 ggttagcaggaccct 153  Q
    |||||||| ||||||    
T  8749809 ggttagcatgaccct 8749795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 39877398 - 39877370
Alignment:
Q  83 cttttatggtaataattcccttttatggt 111  Q
    |||||||||||||||||||||||||||||    
T  39877398 cttttatggtaataattcccttttatggt 39877370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 52520744 - 52520868
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  52520744 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccc 52520843  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  52520844 cgggggcaccggttagcaggaccct 52520868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 160
Target Start/End: Original strand, 43786934 - 43787065
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  43786934 agttaatgcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccc 43787033  T
Q  129 cgggggcaccggttagcaggaccctaatttta 160  Q
    ||||||||||||||||||||||||| ||||||    
T  43787034 cgggggcaccggttagcaggacccttatttta 43787065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 39074482 - 39074605
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39074482 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaa-cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 39074580  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | |||||||||||||||||||||||    
T  39074581 caggggcaccggttagcaggaccct 39074605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 6842682 - 6842805
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6842682 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaaccagtgccc 6842781  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    |||||||| |||||||||||||||    
T  6842782 cgggggcagcggttagcaggaccc 6842805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 272283 - 272406
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  272283 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgcttaatcggtgccc 272382  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||||    
T  272383 cgggggcaccggttagcaggaccc 272406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 10617407 - 10617284
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10617407 agttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacaatttccttttatggtaataattcccttttatggtatgcttaacccgtgccc 10617308  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||||    
T  10617307 cgggggcaccggttagcaggaccc 10617284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 49893394 - 49893517
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49893394 agttaatgcattgaaattgtgtaattaatctataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaatcagtgccc 49893493  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||| ||||||    
T  49893494 cgggggcaccggttagccggaccc 49893517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 858652 - 858777
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  858652 agttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaacccgtgccc 858751  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||| ||||||||    
T  858752 cgggggcaccggttagccggacccta 858777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 46352697 - 46352820
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46352697 agttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccc 46352796  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| ||||||||||||||||||||    
T  46352797 cggaggcaccggttagcaggaccc 46352820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 48725336 - 48725458
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48725336 ttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 48725435  T
Q  131 ggggcaccggttagcaggaccct 153  Q
    ||  ||| |||||||||||||||    
T  48725436 ggaccacgggttagcaggaccct 48725458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 4168246 - 4168370
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||| || |||    
T  4168246 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaacccgtaccc 4168345  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  4168346 cgggggcaccggttagcaggaccct 4168370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 43269862 - 43269737
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||  | |||||||||||||||||||||||||    
T  43269862 agttaatgcattgaaattatgtaattaatttataataaaatcaaacacagtttccttttatagtaataattatcctttatggtatgcttaaccagtgccc 43269763  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    ||| ||||||||||||||||||||||    
T  43269762 cggaggcaccggttagcaggacccta 43269737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 40362703 - 40362579
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  40362703 agttaatgcattaaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccc 40362604  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||| |||| |||||||||||||    
T  40362603 cgggggtaccgattagcaggaccct 40362579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 49529389 - 49529269
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||  |    
T  49529389 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaacattttccttttatggtaataatttccttttatggtatgtttaaccagtg--c 49529292  T
Q  129 cgggggcaccggttagcaggacc 151  Q
    |||||||||||||||||| ||||    
T  49529291 cgggggcaccggttagcaagacc 49529269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 2938163 - 2938038
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||| ||||||| ||| ||||||||||||||| |||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||| |||    
T  2938163 agttaatgcactgaaattgtgtgattaatttataataaagtcaaaaacaatttcattttatggtaataattcacttttatggtatgcttaacgagtaccc 2938064  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    || |||||||||||||||||||||||    
T  2938063 cgagggcaccggttagcaggacccta 2938038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 11308333 - 11308209
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||| |||||||||||| |||||||  ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11308333 agttaatgcattgaaataatgtaattaattgataataaaatcaaaaatagtttccttttatggtaataatt-ccttttatggtatgcttaaccaatgccc 11308235  T
Q  129 cgggggcaccggttagcaggacccta 154  Q
    | ||||||||| ||||||||||||||    
T  11308234 caggggcaccgattagcaggacccta 11308209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 42548158 - 42548274
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  42548158 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaataatttcattttatggtaataattcccttttatggtatgcttaaccagtgctc 42548257  T
Q  129 cgggggcaccggttagca 146  Q
    | ||| ||||||||||||    
T  42548258 c-gggacaccggttagca 42548274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 18014735 - 18014859
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||  |||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  18014735 agttaatgcattgaaattgtgtaattaaactataataaagttaaaaacagtttccttttatgataataatttccttttatggtatgcttaatcagtgccc 18014834  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||| ||||||| ||||||    
T  18014835 cgggggcaccagttagcaagaccct 18014859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 42964372 - 42964248
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||| ||||||||||||||| |     
T  42964372 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatagtaataattcacttttatgatatgcttaaccagtgtct 42964273  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | ||| |||||||||||||||||||    
T  42964272 cagggacaccggttagcaggaccct 42964248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 53489947 - 53489823
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||    
T  53489947 agttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattctattttatggtatgcttaaccaatgccc 53489848  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||| |||||| |||| | |||||||    
T  53489847 cggtggcaccagttaaccggaccct 53489823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 2505412 - 2505523
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||| |||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2505412 agttagtgcattgaaattgtgtaattaattcataataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaaccagtgccc 2505511  T
Q  129 cgggggcaccgg 140  Q
     |||||||||||    
T  2505512 tgggggcaccgg 2505523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 41304070 - 41304184
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    ||||||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  41304070 ttaatgcattgaaatt--gtaattaattgataataaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccaatgccccg 41304167  T
Q  131 ggggcaccggttagcag 147  Q
    | | |||||||||||||    
T  41304168 gagacaccggttagcag 41304184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 41554063 - 41553940
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||    
T  41554063 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattattttttatggtatgcttaacaagtgccc 41553964  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
     |||  ||||| |||| |||||||    
T  41553963 tgggaacaccgattagtaggaccc 41553940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 33140948 - 33141070
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| ||||||||| |||| |||    
T  33140948 agttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatggtaataattcccttttatgatatgcttaatcagtaccc 33141047  T
Q  129 cgggggcaccggttagcaggacc 151  Q
    |||  ||||||||||||| ||||    
T  33141048 cggaagcaccggttagcaagacc 33141070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 7468474 - 7468595
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||| |||||| |||||||| |||||| ||||||||||||||||||||| ||||||||    
T  7468474 agttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatgataataa-tcccttttatggtatgcttaatcagtgccc 7468572  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | || |||||||||||||||||||    
T  7468573 c-ggagcaccggttagcaggaccc 7468595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 20924055 - 20924173
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||    
T  20924055 agttaattcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttttaaggtaataattctcttttatggtatacttaaccagtgtcc 20924154  T
Q  129 cgggggcaccggttagcagga 149  Q
       | ||||||||||||||||    
T  20924155 --tgagcaccggttagcagga 20924173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 41993742 - 41993619
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||  ||||||||| ||||||||||||||||||| ||| |||    
T  41993742 agttaatgcattgaaattatgtaattaatttataataaagttaaaaacagtttccttttat-ataataattctcttttatggtatgcttaactagtaccc 41993644  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
        ||||||||||||||| |||||    
T  41993643 taaaggcaccggttagcagaaccct 41993619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 28139372 - 28139469
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgc 126  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  28139372 agttaatgcattgaaattgtataattaatttataataaagtcaaaagcagattccttttatggtaataattcccttttatggtatacttaaacagtgc 28139469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 38852282 - 38852383
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||| |||||| ||||||||    
T  38852282 ttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttattttatgataataattcacttttatggtatgtttaacccgtgccccg 38852381  T
Q  131 gg 132  Q
    ||    
T  38852382 gg 38852383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 50359309 - 50359181
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||||  ||||||||| |||||||| |||||||||||||| ||||| |||||||||||  ||| |||||||||||||||||||| ||    
T  50359309 agttaatgcattgaaattgggtaattaatatataataaagtcaaaaacagttttcttttgtggtaataattatcttctatggtatgcttaaccagtgtcc 50359210  T
Q  129 cgggggcaccggttagcaggaccctaatt 157  Q
    |||  |||||||||| | |||||| ||||    
T  50359209 cggaagcaccggttaaccggacccaaatt 50359181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 24488429 - 24488551
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||| |||||  ||||||||||| |||||||  |||||||||||||| ||||||||||||||||| |||||||| |||||| ||| ||||| |    
T  24488429 agttaatgcatggaaatagtgtaattaattgataataaaatcaaaaacagtttctttttatggtaataattctcttttatgatatgctgaactagtgctc 24488528  T
Q  129 cgggggcaccggttagcaggacc 151  Q
    |||| |||||||||| |||||||    
T  24488529 cgggagcaccggttaacaggacc 24488551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 29241700 - 29241790
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||| |||||| ||||||||||    
T  29241700 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagattctttttatgataataattccgttttatagtatgcttaa 29241790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 50299068 - 50298973
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||    
T  50299068 agttaatgcactgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatgataataattcactcttatggtatacttaaccagt 50298973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 22248949 - 22249042
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacca 122  Q
    ||||| || ||||||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  22248949 agttattgtattgaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttttatagtatgcttgacca 22249042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 50395685 - 50395562
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||| |||||| ||||||||||| ||||||| ||||||| || |||||||||||||||||||||| |||||||| |||| |||| |||| | |    
T  50395685 agttaatgcatagaaattgtgtaattaattgataataaagtcaaaa-caatttccttttatggtaataattctcttttatgatatgattaatcagtacac 50395587  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    ||| | ||||| |||||||||||||    
T  50395586 cggagacaccgattagcaggaccct 50395562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 52246646 - 52246768
Alignment:
Q  30 gttaatgcattgaaattatgtaattaatttataataatgtcaaaaac-agtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||| | |||  |||||| ||||||||| |||||||||||||||||||| |||| ||    
T  52246646 gttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattttttttttatagtaataatttccttttatggtatgcttaactagtg-cc 52246744  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    || | ||||| |||||||||||||    
T  52246745 cgagagcaccagttagcaggaccc 52246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 13159960 - 13160055
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    ||||||| |||||||||| ||||||||||| ||||||| |||||||||||||| || ||| |||||||||| | ||||||||||||||||| ||||    
T  13159960 agttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataatttctttttatggtatgcttaatcagt 13160055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 52552549 - 52552658
Alignment:
Q  41 gaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccgg 140  Q
    |||||| ||||||||||||||||||| |||||||||||| | |||||||||||||||||| ||||||||||||  ||||||||||  |||||| || |||    
T  52552549 gaaattgtgtaattaatttataataaagtcaaaaacagtat-cttttatggtaataattctcttttatggtatatttaaccagtg-tccggggacatcgg 52552646  T
Q  141 ttagcaggaccc 152  Q
    |||||| |||||    
T  52552647 ttagcatgaccc 52552658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 2119494 - 2119577
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatg 114  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  2119494 agttaatgcattgaaattgagtaattaatttataataaagtcaaaaacaatttccttttat-gtaataatt-ccttttatggtatg 2119577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 31514854 - 31514948
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    |||||||| ||| ||||| |||||||||||||||||||  ||||||||| |||  |||||| ||||||||| |||||||| |||| ||||||||||    
T  31514854 agttaatgtattaaaattgtgtaattaatttataataaaatcaaaaacaattt-tttttatagtaataatttccttttatagtatacttaaccagt 31514948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 2362894 - 2362958
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||  ||||||||||| |||||||  ||||||||||||| |||||||||||    
T  2362894 agttaatgcattgaaatagtgtaattaattgataataaaatcaaaaacagttttcttttatggta 2362958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 53163911 - 53163954
Alignment:
Q  111 tatgcttaaccagtgccccgggggcaccggttagcaggacccta 154  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  53163911 tatgcttaacctgtgccccggaggcaccggttagcaggacccta 53163954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 2362948 - 2363005
Alignment:
Q  102 cttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaatttt 159  Q
    |||||||||||||||||| |||||||||||   || |||||||||||||||| |||||    
T  2362948 cttttatggtatgcttaatcagtgccccggaaacatcggttagcaggacccttatttt 2363005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 6842606 - 6842642
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataata 65  Q
    |||||||||||||||||| ||||||||||||||||||    
T  6842606 agttaatgcattgaaattgtgtaattaatttataata 6842642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 272257 - 272226
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  272257 cttaaccagtgccccgggggcaccggttagca 272226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 23516590 - 23516621
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  23516590 cttaaccagtgccccgggggcaccggttagca 23516621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 39074456 - 39074425
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  39074456 cttaaccagtgccccgggggcaccggttagca 39074425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 46352671 - 46352640
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  46352671 cttaaccagtgccccgggggcaccggttagca 46352640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 49893368 - 49893337
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  49893368 cttaaccagtgccccgggggcaccggttagca 49893337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 52520718 - 52520687
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  52520718 cttaaccagtgccccgggggcaccggttagca 52520687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 17752762 - 17752842
Alignment:
Q  42 aaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    ||||| |||||||||||||||| ||||||| ||  ||||| ||||||   ||||||||||||||| |||||||||||| ||||    
T  17752762 aaattgtgtaattaatttataa-aatgtcataat-agttttcttttacaataataattcccttttttggtatgcttaatcagt 17752842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 19054082 - 19054162
Alignment:
Q  42 aaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    ||||| |||||||||||||||| ||||||| ||  ||||| ||||||   ||||||||||||||| |||||||||||| ||||    
T  19054082 aaattgtgtaattaatttataa-aatgtcataat-agttttcttttacaataataattcccttttttggtatgcttaatcagt 19054162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 25743887 - 25743967
Alignment:
Q  42 aaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    ||||| ||||||||||| |||| || ||||||| | ||||| |||| | ||||||||| |||||| |||||||||||||||||    
T  25743887 aaattgtgtaattaattcataaaaa-gtcaaaatc-gtttcattttttagtaataatttccttttttggtatgcttaaccagt 25743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 51665783 - 51665710
Alignment:
Q  84 ttttatggtaataattcccttttatg-gtatgcttaaccagtgccccgggggcaccggttagcaggaccctaatt 157  Q
    ||||||||||| |||| |||||| |  |||||||||||| ||||||||||  |||||||||||| ||||||||||    
T  51665783 ttttatggtaagaatttccttttttctgtatgcttaacccgtgccccggga-caccggttagcatgaccctaatt 51665710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 18715179 - 18715142
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  18715179 cttaaccagtgccccggaggcaccggttagcagcaccc 18715142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 21010066 - 21010133
Alignment:
Q  37 cattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattccctttt 106  Q
    |||||||||| | |||||||||||||| || |||||||| |||||| |||||||||||||| | ||||||    
T  21010066 cattgaaattgtataattaatttataa-aaagtcaaaaa-agtttctttttatggtaataacttcctttt 21010133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 23160618 - 23160570
Alignment:
Q  113 tgcttaaccagtgccccgggggcaccggttagcaggaccctaattttaat 162  Q
    ||||||||| ||||||||||| ||||||||| || |||||||||||||||    
T  23160618 tgcttaaccggtgccccgggg-caccggttaacatgaccctaattttaat 23160570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 36545164 - 36545127
Alignment:
Q  116 ttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||||| || ||||||    
T  36545164 ttaaccagtgccccgggggcaccggttaacaagaccct 36545127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 36563150 - 36563187
Alignment:
Q  116 ttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||||| || ||||||    
T  36563150 ttaaccagtgccccgggggcaccggttaacaagaccct 36563187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 53054869 - 53054965
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||| ||||||| || |||||||| | |||||| || ||| |||||   ||||||||| ||||||| ||||| ||||||| |||||    
T  53054869 ttaatgcattgagattgtgtaatttatctataataaagccaaaaatag-ttcattttacaataataattctcttttatagtatgtttaaccaatgccc 53054965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 27856519 - 27856395
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27856519 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccc 27856420  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||| ||||||||||||||||    
T  27856419 cgggggcatcggttagcaggaccct 27856395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 20552996 - 20553123
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20552996 ttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 20553095  T
Q  131 ggggcaccggttagcaggaccctaattt 158  Q
    ||||||||||||||||||||||| ||||    
T  20553096 ggggcaccggttagcaggacccttattt 20553123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 6580252 - 6580372
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6580252 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 6580351  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||   |||||||||||||||    
T  6580352 cggggg---cggttagcaggaccc 6580372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 31438709 - 31438838
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31438709 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccc 31438808  T
Q  129 cgggggcaccggttagcaggaccctaattt 158  Q
    ||||| ||||||||||||||||||| ||||    
T  31438809 cggggacaccggttagcaggacccttattt 31438838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 4381858 - 4381982
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4381858 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgccc 4381957  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||| |||| |||||||||||||||    
T  4381958 cgggagcactggttagcaggaccct 4381982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 30486273 - 30486396
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| |||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30486273 agttaatgtattgaaattgtgtaattaaactataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 30486372  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||||    
T  30486373 cgggggcaccggttagcaggaccc 30486396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 31390075 - 31390198
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  31390075 agttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacccgtgctc 31390174  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||| ||||||||||||    
T  31390175 cgggggcaccgattagcaggaccc 31390198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 32360992 - 32360869
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32360992 agttaatgcattgaaataatataattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccaatgccc 32360893  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||||    
T  32360892 cgggggcaccggttagcaggaccc 32360869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 3668236 - 3668112
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  3668236 agttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatagtatgtttaaccagtgccc 3668137  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    || ||||||||||||||| ||||||    
T  3668136 cgagggcaccggttagcaagaccct 3668112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 34 - 154
Target Start/End: Complemental strand, 22068438 - 22068318
Alignment:
Q  34 atgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggg 133  Q
    ||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22068438 atgcattgaaattgtataattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggg 22068339  T
Q  134 gcaccggttagcaggacccta 154  Q
    |||||| ||||||||||||||    
T  22068338 gcaccgattagcaggacccta 22068318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 34442655 - 34442532
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  34442655 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaaccagtg-cc 34442557  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||| ||||||||||||||||    
T  34442556 cgggggcatcggttagcaggaccct 34442532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 22887813 - 22887936
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  22887813 agttaatgcattgaaattatgtaattaatttataataaagttaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgctc 22887912  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||||||||||| |||||| |||||    
T  22887913 cgggggcaccgattagcatgaccc 22887936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 44587965 - 44588088
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44587965 agttaatacattgaaattgtgtaattaatttataataaagtaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacaagtgccc 44588064  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    |||||| |||||||||||||||||    
T  44588065 cgggggtaccggttagcaggaccc 44588088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 26387187 - 26387061
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||     
T  26387187 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgcttaaccagtgcct 26387088  T
Q  129 cgggggcaccggttagcaggaccctaa 155  Q
     |||||||||||||| |||||||||||    
T  26387087 tgggggcaccggttaacaggaccctaa 26387061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 35851874 - 35851741
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcc- 127  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||     
T  35851874 agttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttcattttatggtaataattctcttttatggtatgcttaaccaatgcct 35851775  T
Q  128 ccgggggcaccggttagcaggaccctaattttaa 161  Q
    | |||||||||||||||||||||||| |||||||    
T  35851774 cggggggcaccggttagcaggaccctgattttaa 35851741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 1859225 - 1859342
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  1859225 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccc 1859324  T
Q  129 cgggggcaccggttagca 146  Q
      ||  ||||||||||||    
T  1859325 taggaacaccggttagca 1859342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 8969530 - 8969406
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  8969530 agttaatgcattgaaatagtgtaattaatttataataaagtcaaaagcagtttccttttatggtaataatttccttttatagtatgcttaactagtgccc 8969431  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | ||||||||||||||||| |||||    
T  8969430 ctggggcaccggttagcagtaccct 8969406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 22567665 - 22567789
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||||| |||| |    
T  22567665 agttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttccttttatggtaataattctcttttatggtatgcttaacccgtgctc 22567764  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | |||||||||||||||||||||||    
T  22567765 caggggcaccggttagcaggaccct 22567789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 4022602 - 4022480
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||||||| |||| |||||||||| ||    
T  4022602 agttaatgtattgaaattctgtaattaatttataataaagtcagaaacagtttccttttatgataataatttccttttatgatatgtttaaccagtgtcc 4022503  T
Q  129 cgggggcaccggttagcaggacc 151  Q
    |||||||||||||||||||||||    
T  4022502 cgggggcaccggttagcaggacc 4022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 561641 - 561520
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||  ||||||||| |||||||||||||||||| |||| |||    
T  561641 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcagtttccttttataataataattctcttttatggtatgcttaatcagtaccc 561542  T
Q  129 cgggggcaccggttagcaggac 150  Q
    ||| ||||||||||||||||||    
T  561541 cggaggcaccggttagcaggac 561520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 32860167 - 32860288
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  32860167 ttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttat-gtaataattctcttttatggtatgcttaaccagtgtcccg 32860265  T
Q  131 ggggcaccggttagcaggaccct 153  Q
    ||| || | |||| |||||||||    
T  32860266 gggacagctgttaacaggaccct 32860288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 2898134 - 2898262
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| |||  ||||||||| ||||||||||||| |||| ||||| ||    
T  2898134 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttctatcataataattctcttttatggtatgtttaatcagtgtcc 2898233  T
Q  129 cgggggcaccggttagcaggaccctaatt 157  Q
    ||| ||||||||||||||||||| |||||    
T  2898234 cggaggcaccggttagcaggaccataatt 2898262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 25782956 - 25782840
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||    
T  25782956 agttaatgcattgaaattgtgtaattattttataataaagtcaaaaacaattttcttttatgataataattcccttttatggtatgcttaaccagtgtcc 25782857  T
Q  129 cgggggcaccggttagc 145  Q
    ||||| || ||||||||    
T  25782856 cggggacatcggttagc 25782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 28601034 - 28601153
Alignment:
Q  34 atgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggg 133  Q
    ||||||||||||| | ||||||||| ||||||| || |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||     
T  28601034 atgcattgaaattgtataattaattgataataaagttaaaaacagtttctttttatggtaataattctcttttatggtatgcttaaccagtgcactggga 28601133  T
Q  134 gcaccggttagcaggaccct 153  Q
    ||||||||||||||||||||    
T  28601134 gcaccggttagcaggaccct 28601153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 5093662 - 5093539
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||||| || |||||||||||| |||||||| |||||||||||||| ||||| |||||||    
T  5093662 agttaatgcattaaaattgtgtaattaatttataataaagtcaaaagcaatttccttttatgataataatttccttttatggtatgtttaactagtgccc 5093563  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | ||||||||||||| |||||||||    
T  5093562 c-ggggcaccggttaacaggaccct 5093539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 13574150 - 13574053
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  13574150 ttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatggtaataatttccttttatggtatgcttaacccgtgccc 13574053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 38590997 - 38590883
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||| ||| ||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||    
T  38590997 agttaatgtattaaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaaccaataccc 38590898  T
Q  129 cgggggcaccggttag 144  Q
    | | ||||||||||||    
T  38590897 c-gaggcaccggttag 38590883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 43637227 - 43637343
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||  ||||| |||||| |||| |    
T  43637227 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaataatttccttttacagtatgtttaacccgtgctc 43637326  T
Q  129 cgggggcaccggttagca 146  Q
    | ||||||||||||||||    
T  43637327 c-ggggcaccggttagca 43637343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 11021345 - 11021259
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgc 115  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  11021345 agttaatgcattgaaattgtgtaattaatatataataaagtcaaaaacagttttcttttgtggtaataattcccttttatggtatgc 11021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 27584801 - 27584922
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||| ||||||||||| |||||||||||||||||||  |||||| ||||||||||||||||||||||||| | || ||||||| ||||||||||| ||    
T  27584801 agttaaagcattgaaattgtgtaattaatttataataaaatcaaaagcagtttccttttatggtaataattctcattcatggtatacttaaccagtg-cc 27584899  T
Q  129 cgggggcaccggttagcaggacc 151  Q
    |||  ||| ||||||||||||||    
T  27584900 cggaagcagcggttagcaggacc 27584922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 5881289 - 5881374
Alignment:
Q  34 atgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 119  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||| ||||||||  ||||||||||||||||||    
T  5881289 atgcattgaaattgtgtaattaattgataataaagtcaaaaagagtttccttttatgataataattatcttttatggtatgcttaa 5881374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 25772176 - 25772269
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||| | ||||| |||||| |||||||||||||||||||||| ||||| ||||    
T  25772176 ttaatgcaatgaaattgtgtaattaatttataataaagtcaaaaataatttccctttatgataataattcccttttatggtatacttaatcagt 25772269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 26891786 - 26891722
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  26891786 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggta 26891722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 29102405 - 29102313
Alignment:
Q  30 gttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacca 122  Q
    |||||| |||||||||| | ||||||||||||||||| |||||||||||||| ||||||| |||||||||  |||||||| |||| |||||||    
T  29102405 gttaatacattgaaattttataattaatttataataaagtcaaaaacagttttcttttatagtaataattatcttttatgatatgtttaacca 29102313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 38296242 - 38296310
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatt 99  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  38296242 ttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatggtaataatt 38296310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 39531887 - 39532008
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| |||||||||||||||| |  ||||||| |||||| ||||||||||||| |||  |||||  | ||||||||||||||| |     
T  39531887 agttaatgcattgaaattgtgtaattaatttataa-agagtcaaaaccagttttcttttatggtaat-attttctttttcgatatgcttaaccagtgtct 39531984  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | | |||||||||||||| |||||    
T  39531985 cagaggcaccggttagcatgaccc 39532008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 34123147 - 34123057
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaac 120  Q
    ||||||||| ||||| || |||||||||||||||| || ||||||||||||||||||||||||| ||||||  ||||| |  ||||||||||    
T  34123147 agttaatgctttgaatttgtgtaattaatttataaaaa-gtcaaaaacagtttccttttatggtcataattttcttttttaatatgcttaac 34123057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 15079081 - 15079012
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatt 99  Q
    |||||||| ||||||||| |||||||||||||||| || |||||||||| |||||||||||| ||||||||    
T  15079081 agttaatgtattgaaattgtgtaattaatttataa-aaagtcaaaaacaatttccttttatgataataatt 15079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 31782633 - 31782565
Alignment:
Q  84 ttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||| |||| |||||| | |||||||||||| ||||| |||||||||||||||||| |||||    
T  31782633 ttttatggtaaaaatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgaccc 31782565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 45262024 - 45262096
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    |||||||||||||||||||| | |||| | ||||||||||||  || |||||||||||||||||||| |||||    
T  45262024 ttccttttatggtaataatttcttttttttgtatgcttaacctttgtcccgggggcaccggttagcatgaccc 45262096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 15146695 - 15146789
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    ||||||| |||||||||| | |||||||||||||| || |||||||| | |||||||||||| ||||||||  | ||| ||||||| |||||||||    
T  15146695 agttaatacattgaaattgtataattaatttataaaaa-gtcaaaaataatttccttttatgataataattttcctttttggtatgtttaaccagt 15146789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 10820547 - 10820630
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatg 114  Q
    ||||||| |||||| ||| | |||||||||||||| || || |||||||||||||||||||||||||||||  ||||| |||||||    
T  10820547 agttaatacattgagattgt-taattaatttataaaaa-gttaaaaacagtttccttttatggtaataattttcttttttggtatg 10820630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 19037002 - 19036956
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccctaattttaa 161  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  19037002 cttaacccgtgccccgggggcaccggttagcagcacccttattttaa 19036956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 20431555 - 20431624
Alignment:
Q  83 cttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    |||||||| |||||||| |||||| ||| || ||||||||||||||||| | |||||||| ||| |||||    
T  20431555 cttttatgataataatttccttttttggcatacttaaccagtgccccggagacaccggtttgcatgaccc 20431624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 26270098 - 26270170
Alignment:
Q  80 ttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||| |||| | |||| |  ||||||||||  ||||||||| |||||||||||||| |||||    
T  26270098 ttccttttatggtaaaaatttcttttttttatatgcttaacaggtgccccggaggcaccggttagcatgaccc 26270170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 561667 - 561698
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  561667 cttaaccagtgccccgggggcaccggttagca 561698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 26891733 - 26891683
Alignment:
Q  101 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    |||||||||||||||||||| |||| |  |||||||||||||||||||||||    
T  26891733 ccttttatggtatgcttaactagtgtct-gggggcaccggttagcaggaccc 26891683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 32361018 - 32361049
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  32361018 cttaaccagtgccccgggggcaccggttagca 32361049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 35851918 - 35851949
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  35851918 cttaaccagtgccccgggggcaccggttagca 35851949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 8373303 - 8373341
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  8373303 cttaaccagtgccccgggagcaccggttagcagtaccct 8373341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 16807299 - 16807234
Alignment:
Q  78 gtttccttttatggtaataatt--cccttttatggtatgcttaaccagtgccccgggggcaccggtta 143  Q
    ||||||||||||| ||||||||  ||||||| ||| || |||||| ||||||||||||||||||||||    
T  16807299 gtttccttttatgctaataattttccctttt-tgg-atccttaacgagtgccccgggggcaccggtta 16807234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 16846580 - 16846515
Alignment:
Q  78 gtttccttttatggtaataatt--cccttttatggtatgcttaaccagtgccccgggggcaccggtta 143  Q
    ||||||||||||| ||||||||  ||||||| ||| || |||||| ||||||||||||||||||||||    
T  16846580 gtttccttttatgctaataattttccctttt-tgg-atccttaacgagtgccccgggggcaccggtta 16846515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 27856545 - 27856573
Alignment:
Q  115 cttaaccagtgccccgggggcaccggtta 143  Q
    |||||||||||||||||||||||||||||    
T  27856545 cttaaccagtgccccgggggcaccggtta 27856573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 29771474 - 29771422
Alignment:
Q  94 ataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 146  Q
    |||||| |||||| |  ||| |||||||||||||||||||||| |||||||||    
T  29771474 ataatttccttttttattatccttaaccagtgccccgggggcatcggttagca 29771422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 44331841 - 44331952
Alignment:
Q  35 tgcattgaaa-ttatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggg 133  Q
    |||||||||| || ||||||||||| ||||  | ||||| || | ||||||||||||| ||||| | |||||| | ||||| ||||| ||||||| || |    
T  44331841 tgcattgaaacttgtgtaattaattcataaataagtcaacaaaa-tttccttttatggaaataaattcctttttttgtatgattaactagtgccctggag 44331939  T
Q  134 gcaccggttagca 146  Q
    ||||| |||||||    
T  44331940 gcaccagttagca 44331952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 10773 - 10896
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  10773 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaaccagtgcct 10872  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    |||||||| |||||||||||||||    
T  10873 cgggggcagcggttagcaggaccc 10896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 6233 - 6109
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  6233 agttaatgcattggaattgtgtaattaaattataataaagtcaaaaacagtttccttttatggtaataatccccttttatggtatgtttaacccgtgccc 6134  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||||||||||    
T  6133 cgggggcaccggttagcaggaccct 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 14959 - 15082
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||| ||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14959 agttaatgcactgaaattgtgtagttaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 15058  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| ||||| ||||| ||||||||    
T  15059 cggaggcactggttaacaggaccc 15082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 53808 - 53684
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| || |||    
T  53808 agttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacccgttccc 53709  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||||||||||||||||| ||||||    
T  53708 cgggggcaccggttagcaagaccct 53684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 53834 - 53865
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagca 146  Q
    ||||||||||||||||||||||||||||||||    
T  53834 cttaaccagtgccccgggggcaccggttagca 53865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 40982 - 41105
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| ||    
T  40982 agttaatgcattgaaattatgtaattaatttataatgaagtcaaaaacagtttccttttatgataataatttccttttatgatatgcttaaccagtgtcc 41081  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||| | |||||||| |||||||||    
T  41082 cggagacaccggttggcaggaccc 41105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 23026 - 23150
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||     
T  23026 ttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgttaataattctcttttatggtatgtttaaccagtgcccca 23125  T
Q  131 ggggcaccggttagcaggaccctaa 155  Q
     || |||||||||||| ||||||||    
T  23126 aggacaccggttagcaagaccctaa 23150  T

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Target: scaffold0021 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 116267 - 116391
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  116267 agttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatgataataattcccttttatggtatgtttaacccgtgccc 116366  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    | |||  |||||||||||| |||||    
T  116367 cagggataccggttagcagtaccct 116391  T

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Target: scaffold0007 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 233918 - 234039
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||| |||||||||||||||  ||||||| |||||||||||||| |||||| || | |||    
T  233918 ttaattcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatgaaaataatttccttttatggtatgtttaaccggtactccg 234017  T
Q  131 ggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||||||    
T  234018 ggggcaccggttagcaggaccc 234039  T

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Target: scaffold0524 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 888 - 1004
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  888 agttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttccttttatagtaataattctcttttatggtatgcttaaccagtgccc 987  T
Q  129 cgggggcaccggttagc 145  Q
       || |||||||||||    
T  988 taaggacaccggttagc 1004  T

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Target: scaffold0034 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 95705 - 95582
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||  |||     
T  95705 ttaatgaattgaaattatgtaattaatttataataaagtcaaaa-cagttttcttttatggtaataattcccttttatggtatgtttaaccggtatccca 95607  T
Q  131 ggggcaccggttagcaggaccctaa 155  Q
    ||||| |||||||| ||||||||||    
T  95606 ggggctccggttaggaggaccctaa 95582  T

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Target: scaffold0014 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 68413 - 68290
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||| ||||| ||||| ||| ||||||||| || |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  68413 agttaatgcattaaaattgtgtaaataaattataataaagttaaaatcagtttccttttaaggtaataattcccttttatggtatgcttaaccagtaccc 68314  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    ||  |||| |||||||||||||||    
T  68313 cgaaggcatcggttagcaggaccc 68290  T

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Target: scaffold0038 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 25783 - 25905
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  25783 ttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatccttaaacagtgacccg 25882  T
Q  131 ggggcaccggttagcaggaccct 153  Q
      ||||| |||||| ||||||||    
T  25883 aaggcacaggttagtaggaccct 25905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 69289 - 69412
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||  ||||| ||||||||||  ||||||||||||||||||||||||||     
T  69289 agttaatacattaaaattatgtaattaatttataataaagtcaaaagcagtttttttttaaggtaataatt-tcttttatggtatgcttaaccagtgcct 69387  T
Q  129 cgggggcaccggttagcaggaccct 153  Q
    |||| ||||||||||| ||||||||    
T  69388 cgggagcaccggttagaaggaccct 69412  T

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Target: scaffold0050; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 33804 - 33709
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg 125  Q
    ||||||| |||||||||| |||||||||||||||| ||  | ||||| ||||| |||||||| ||||||||  || || || |||||||||| ||||    
T  33804 agttaatacattgaaattgtgtaattaatttataa-aagataaaaaatagttttcttttatgctaataattttctcttttgatatgcttaactagtg 33709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 741 - 863
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||| |||| |||||||||| ||||||| ||||||||||||||||||| | |  ||    
T  741 agttaatccattgaaattgtgtaattaatttataataaagtcaaaaactgttttcttttatggtgataattctcttttatggtatgcttaactaatagcc 840  T
Q  129 cgggggcaccggttagcaggaccc 152  Q
    | |||||||||||||| |||||||    
T  841 c-ggggcaccggttagtaggaccc 863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 19706 - 19585
Alignment:
Q  31 ttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccg 130  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| | ||||| ||| |||||||| |||| |||| ||||| ||||    
T  19706 ttaatgcattgaaattgtgtaatgaatttataataaagtcaaaaacagtttccttttacgataatagttctcttttatgatatgattaatcagtgtcccg 19607  T
Q  131 ggggcaccggttagcaggaccc 152  Q
    |   | ||||||||||||||||    
T  19606 gaaactccggttagcaggaccc 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 355 - 450
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| || ||||||||||| |||||||| |||| |||| ||||    
T  355 agttaatgcattgaaattgtgtaataaatttataataaagtcaaaaacagtttccttctacggtaataattctcttttatgatatgattaatcagt 450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 17590 - 17502
Alignment:
Q  32 taatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacc 121  Q
    ||||||||||||||| || |||||||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||| ||||||    
T  17590 taatgcattgaaattgtg-aattaatttataataaagtcaaaaacagttttcttttatgataataattcctttttatggtatgtttaacc 17502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 50611 - 50719
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    ||||||||  |||||||| | ||||||||||||||||| ||||||| || ||| |||||||| ||||||||| ||||||| ||||| ||||||||||| |    
T  50611 agttaatgttttgaaattgtataattaatttataataaagtcaaaatcaattttcttttatgataataattctcttttatagtatgtttaaccagtgctc 50710  T
Q  129 cgggggcac 137  Q
    |||||||||    
T  50711 cgggggcac 50719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 53469 - 53358
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccc 128  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||| |||           |||||||| ||||||||||||||||||| |||||||    
T  53469 agttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattt-----------aataattctcttttatggtatgcttaactagtgccc 53381  T
Q  129 cgggggcaccggttagcaggacc 151  Q
    ||| |||||||||||||||||||    
T  53380 cggaggcaccggttagcaggacc 53358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 147028 - 146933
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagt 124  Q
    ||||||| |||||||||| ||||||||||| ||||||| |||||||||||||| || ||| |||||||||| | ||||||||||||||||| ||||    
T  147028 agttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataatttctttttatggtatgcttaatcagt 146933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 8020 - 7956
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||    
T  8020 agttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 7967 - 7914
Alignment:
Q  101 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||||||||    
T  7967 ccttttatggtatgcttaacccgtgccccggaggtaccggttagcaggacccta 7914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 7351 - 7415
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||    
T  7351 agttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 7415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 7404 - 7457
Alignment:
Q  101 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccta 154  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||||||||    
T  7404 ccttttatggtatgcttaacccgtgccccggaggtaccggttagcaggacccta 7457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 11093 - 11029
Alignment:
Q  29 agttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggta 93  Q
    |||||||||||||||||| |||||||||  |||||||| ||||||||||||||| ||||||||||    
T  11093 agttaatgcattgaaattgtgtaattaaactataataaagtcaaaaacagtttcattttatggta 11029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 11038 - 10990
Alignment:
Q  103 ttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 152  Q
    ||||||||||||||||||  |||||| ||||||||| |||||||||||||    
T  11038 ttttatggtatgcttaactggtgccc-gggggcaccagttagcaggaccc 10990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 509058 - 508986
Alignment:
Q  83 cttttatggtaataattcccttttatg--gtatgcttaaccagtgccccgggggcaccggttagcaggaccct 153  Q
    |||||||||||| |||| |||||| |   |||||||||| | ||||||||| |||||||||||||| ||||||    
T  509058 cttttatggtaaaaatttcctttttttttgtatgcttaaacggtgccccggaggcaccggttagcatgaccct 508986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 52496 - 52452
Alignment:
Q  115 cttaaccagtgccccgggggcaccggttagcaggaccctaatttt 159  Q
    ||||||| ||||||| | ||||||||||| |||||||||||||||    
T  52496 cttaaccggtgcccccgaggcaccggttaacaggaccctaatttt 52452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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