View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1154_low_9 (Length: 393)
Name: NF1154_low_9
Description: NF1154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1154_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 33 - 385
Target Start/End: Complemental strand, 33766085 - 33765733
Alignment:
| Q |
33 |
gatacattcgaataataaatacttaacaagacagctcaaatacagtgatgtagttatctcataattagtctctaatctctgttgaatagtctaatgaaca |
132 |
Q |
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| T |
33766085 |
gatacattcgaataataaatacttaacaagacagctcaaaaacagtgatgtagttatctcataattagtctctaatctctattgaatagtctaatgaaca |
33765986 |
T |
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| Q |
133 |
aatacaaggagttgaatacttgtttttactgtgtaatttgccgacctaaaatgaaagtttaatcttattggtgagtgaggctacaattgtacaattaaaa |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33765985 |
aatacaaggagttgaatacttgtttttactgtgtaatttgccgacctacagtgaaagtttaatcttattggtgagtgaggctacaattgtacaattaaaa |
33765886 |
T |
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| Q |
233 |
attgagtacaagaaaataacccctattataatatcactgagaagggaaatggaacttaagatagaaacaaaaacccaaacaaatttgttgcaggcttcgc |
332 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
33765885 |
attgagtacaagaaaataacccctattataatatcactgagaggggaaatggaacttaagatagaaacaaaaatccaaacaaatttgttgcaggcttcgc |
33765786 |
T |
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| Q |
333 |
ctagatataacaattcgagcggattctacaatgcaacatttggtattcatctc |
385 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33765785 |
ctagatataacaattcgagcggattctacaatgcaacatttggtattcatctc |
33765733 |
T |
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