View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11550_low_12 (Length: 271)
Name: NF11550_low_12
Description: NF11550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11550_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 36972151 - 36971881
Alignment:
| Q |
1 |
ccaccatccattttcagacacgggcatttgagaaacctataaaaattagtagcaattgtgccatcatctgttctttgacagcattaactactaaagctag |
100 |
Q |
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| T |
36972151 |
ccaccatccattttcagacacgggcatttgagaaacctataaaaattagtagcaattgtgccatcatctgttctttgacagcattaactactaaagctag |
36972052 |
T |
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| Q |
101 |
aattaagtttgtattctagacaatgaggggacaaaacaaaattggtaaaccataataaactcgtgcagaatgtctgtactctgtacatcataaatttgta |
200 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36972051 |
aattgagtttgtattctagacaatgaggggacaaaacaaaattggtaaaccataataaactcgtgcagaatgtctgtactctgtacatcataaatttgta |
36971952 |
T |
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| Q |
201 |
caatagaataatacgataaattcaatcttcaactaatccaccaatttctgcaggtactccactctaaatct |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36971951 |
caatagaataatacgataaattcaatcttcaactaatccaccaatttctgcaggtactccactctaaatct |
36971881 |
T |
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