View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11552_low_8 (Length: 245)
Name: NF11552_low_8
Description: NF11552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11552_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 46921591 - 46921803
Alignment:
| Q |
13 |
agaccactacaattacaaccttttaacagattctgaagcaaactttgactacaccaatttcaaccttcaaaatgaagaacaaggttttgtttctactttt |
112 |
Q |
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| T |
46921591 |
agaccactacaattacaaccttttaacagattctgaagcaaactttgactacaccaatttcaaccttcaaaatgaagaacaaggttttgtttctactttt |
46921690 |
T |
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| Q |
113 |
ctcaagaaccaacaaacagagaattatccttatgaaaattggagtaacaattgtccatctttagatagttcaatttcaactcgttctcgttctcgttcca |
212 |
Q |
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| T |
46921691 |
ctcaagaaccaacaaacagagaattatccttatgaaaattggagtaacaattgtccatctttagatagttcaatttcaa------ctcgttctcgttcca |
46921784 |
T |
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| Q |
213 |
agaaacgcagagtcaaaac |
231 |
Q |
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||||||||||||||||||| |
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| T |
46921785 |
agaaacgcagagtcaaaac |
46921803 |
T |
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