View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11557A_low_101 (Length: 338)
Name: NF11557A_low_101
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_101 |
 |  |
|
| [»] scaffold0506 (1 HSPs) |
 |  |  |
|
| [»] scaffold0160 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 25 - 285
Target Start/End: Original strand, 32656059 - 32656320
Alignment:
| Q |
25 |
taattttatctcatgacatatagtttgtttcaatgtatcnnnnnnnncaatgcagaaggtgaatgttcaatccataaaa-gcaatcagatagatttcaaa |
123 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
32656059 |
taattttatctcatgacatatactttgtttcaatgtatcttttttttcaatgcagaaggtgaatgttcaatccataaaaagcaattagatagatttcaaa |
32656158 |
T |
 |
| Q |
124 |
acattcactagaaattgattgtcatgatagttgcttcttcttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaaccctatt |
223 |
Q |
| |
|
||||||||||||| ||||| ||||||| |||| ||||| |||||||||||||||||| |||||||||| ||||| ||||||||||||||||| | |||| |
|
|
| T |
32656159 |
acattcactagaatgtgattttcatgatcgttgtttcttattatctataaaagttaactcgaaagttaaattttaccctaattttaacctaaatcatatt |
32656258 |
T |
 |
| Q |
224 |
gattaaatttannnnnnnaaccctaatgcttaattccgatttgtttaagtctattaatccta |
285 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
32656259 |
gattaaatttactgttttaaccctaatgcttaattccgatttgtttaaccctattaatccta |
32656320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 32661098 - 32661219
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaaccctattgattaaatttannnnnnnaaccctaatgcttaattccgat |
263 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
32661098 |
ttatctataaaagttaacccgaaagcttatttttgccctaattttaacctaaaccctattgattaaatttactgttttaaccctaatgcttaattctgat |
32661197 |
T |
 |
| Q |
264 |
ttgtttaagtctattaatccta |
285 |
Q |
| |
|
|||||||| ||||||||||||| |
|
|
| T |
32661198 |
ttgtttaactctattaatccta |
32661219 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 32662600 - 32662716
Alignment:
| Q |
42 |
atatagtttgtttcaatgtatcnnnnnnnncaatgcagaaggtgaatgttcaatccataaaagcaatcagatagatttcaaaacattcactagaaattga |
141 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
32662600 |
atatactttgtttcaatgtatcttttttttcaatgcagaaggtgaatgttcaatccgtaaaagcaattagatagatttcaaaacattcactagaaggtga |
32662699 |
T |
 |
| Q |
142 |
ttgtcatgatagttgct |
158 |
Q |
| |
|
|||||||||| |||||| |
|
|
| T |
32662700 |
ttgtcatgatcgttgct |
32662716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 51654891 - 51654990
Alignment:
| Q |
159 |
tcttcttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaaccctattgattaaatttannnnnnnaaccctaatgcttaatt |
258 |
Q |
| |
|
||||||||| ||| |||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
51654891 |
tcttcttatatattaaagttaacccgaaagcttatttttgccctaattttaacctaaaccctattgattaaatttactgttttaaccctaatgcttaatt |
51654990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 51654828 - 51654891
Alignment:
| Q |
159 |
tcttcttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaaccctat |
222 |
Q |
| |
|
||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||| |
|
|
| T |
51654828 |
tcttcttatatattaaagttaacccgaaaacttatttttgccctaattttaacctaaaccctat |
51654891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 29619748 - 29619698
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||| ||| ||||||||||||| ||||||||||||||| |
|
|
| T |
29619748 |
ttatatataaaagttaatccgtaagttaatttttaacctaattttaaccta |
29619698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 35184363 - 35184415
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaa |
216 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||||| |
|
|
| T |
35184363 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaacctaaa |
35184415 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 13454613 - 13454563
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
13454613 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
13454563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 49808470 - 49808420
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||| ||| |||| |||||||| ||||||||||||||| |
|
|
| T |
49808470 |
ttatatataaaagttaatccgtaagtcaatttttaacctaattttaaccta |
49808420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 13458982 - 13458930
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaa |
216 |
Q |
| |
|
|||| ||||||||||||| || ||| |||||||| ||||||||||||||||| |
|
|
| T |
13458982 |
ttatatataaaagttaactcgtaagccaatttttaacctaattttaacctaaa |
13458930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 37288955 - 37289066
Alignment:
| Q |
159 |
tcttcttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaaccctattgattaaatttannnnnnnaaccctaatgcttaatt |
258 |
Q |
| |
|
||||||||||||||||| |||| || |||||| |||||| |||||||||||| |||| | ||||||||||||||| ||||||||||||||||| |
|
|
| T |
37288955 |
tcttcttatctataaaa-ttaatccaaaagtttatttttgccctaattttaacataaatcatattgattaaatttattgttttaaccctaatgcttaatt |
37289053 |
T |
 |
| Q |
259 |
ccgatttgtttaa |
271 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
37289054 |
ctgatttgtttaa |
37289066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 45400629 - 45400577
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaa |
216 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
45400629 |
ttatatataaaagttaacccgtaagttaatttttaacctaattttaacctaaa |
45400577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 34109013 - 34108963
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| |||| |||||||| ||||||||||||||| |
|
|
| T |
34109013 |
ttatatataaaagttaacccgtaagtcaatttttaacctaattttaaccta |
34108963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 35364110 - 35364063
Alignment:
| Q |
77 |
cagaaggtgaatgttcaatccataaaagcaatcagatagatttcaaaa |
124 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||| |||||||||| |
|
|
| T |
35364110 |
cagaaggtgaatgttcaatacataaaagcaattagagggatttcaaaa |
35364063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 19767110 - 19767060
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
19767110 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
19767060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 29307756 - 29307806
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
29307756 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
29307806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 34109438 - 34109388
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
34109438 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
34109388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 40236699 - 40236649
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
40236699 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
40236649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 25872847 - 25872926
Alignment:
| Q |
200 |
cctaattttaacctaaaccctattgattaaatttannnnnnnaaccctaatgcttaattccgatttgtttaagtctattaat |
281 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
25872847 |
cctaattttaacctaaatcctattgcataaatttactgtattaaccctaatgcttaattcc--tttgtttaaccctattaat |
25872926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 25874114 - 25874193
Alignment:
| Q |
200 |
cctaattttaacctaaaccctattgattaaatttannnnnnnaaccctaatgcttaattccgatttgtttaagtctattaat |
281 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
25874114 |
cctaattttaacctaaatcctattgcataaatttactgtattaaccctaatgcttaattcc--tttgtttaaccctattaat |
25874193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 22275662 - 22275727
Alignment:
| Q |
159 |
tcttcttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaaccctattg |
224 |
Q |
| |
|
||||||||| ||| |||||||||||||||| ||||| | ||||||||||| ||||||||||||| |
|
|
| T |
22275662 |
tcttcttatatattaaagttaacccgaaagcatattttaaccctaattttaagctaaaccctattg |
22275727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 22275338 - 22275403
Alignment:
| Q |
159 |
tcttcttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaaccctattg |
224 |
Q |
| |
|
||||||||| ||| |||||||||||||||| ||||| ||||||||||||| ||||| |||||| |
|
|
| T |
22275338 |
tcttcttatatattaaagttaacccgaaagcatattttagtcctaattttaacttaaactctattg |
22275403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 25000209 - 25000261
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaa |
216 |
Q |
| |
|
|||| ||| |||||||||||||| ||||||| || ||||||||||||||||| |
|
|
| T |
25000209 |
ttatttattaaagttaacccgaaggttaattgttgccctaattttaacctaaa |
25000261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.000000007; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 45061144 - 45061089
Alignment:
| Q |
159 |
tcttcttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
45061144 |
tctttttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
45061089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 25647880 - 25647930
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
25647880 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
25647930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 41354601 - 41354651
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||| | |||| |||||||| ||||||||||||||| |
|
|
| T |
41354601 |
ttatatataaaagttaacctgtaagtcaatttttaacctaattttaaccta |
41354651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 45060979 - 45060929
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
45060979 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
45060929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 45158832 - 45158782
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
45158832 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
45158782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 30409865 - 30409813
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaacctaaa |
216 |
Q |
| |
|
|||| |||||||||||||||| || | |||||||| ||||||||||| ||||| |
|
|
| T |
30409865 |
ttatatataaaagttaacccgtaaatcaatttttaacctaattttaatctaaa |
30409813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0506 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0506
Description:
Target: scaffold0506; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 951 - 901
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
951 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
901 |
T |
 |
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Target: scaffold0160 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0160
Description:
Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 35568 - 35618
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
35568 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
35618 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 2396951 - 2396901
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
2396951 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
2396901 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 39871325 - 39871375
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
39871325 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
39871375 |
T |
 |
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Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 10257675 - 10257625
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
10257675 |
ttatatataaaagttaacccgtaagccaatttttaacctaattttaaccta |
10257625 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 40912443 - 40912393
Alignment:
| Q |
164 |
ttatctataaaagttaacccgaaagttaatttttatcctaattttaaccta |
214 |
Q |
| |
|
|||| |||||||||||||||| || |||||||||| |||||||||||||| |
|
|
| T |
40912443 |
ttatatataaaagttaacccgtaaattaatttttaatctaattttaaccta |
40912393 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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