View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11557A_low_119 (Length: 325)
Name: NF11557A_low_119
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_119 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 44999135 - 44999350
Alignment:
| Q |
5 |
agtatcatagagaggcacacaaaccaagctatgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatat |
104 |
Q |
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| T |
44999135 |
agtatcatagagaggcacacaaaccaagctatgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatat |
44999234 |
T |
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| Q |
105 |
agaaggaaggaaaaaataaataaataaagaaatgtgagaacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataa |
204 |
Q |
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| T |
44999235 |
agaaggaaggaaaaaataaataaat----aaatgtgagaacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataa |
44999330 |
T |
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| Q |
205 |
actccaattcgtgagcccta |
224 |
Q |
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|||||||||||||||||||| |
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| T |
44999331 |
actccaattcgtgagcccta |
44999350 |
T |
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