View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11557A_low_185 (Length: 274)
Name: NF11557A_low_185
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_185 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 268
Target Start/End: Original strand, 27036334 - 27036599
Alignment:
| Q |
8 |
aaacagagaccacatgtgttgttaaattccggaatagttagcacaactagtttgagttaaagaataaaaactccgaggttgcgagtttcaatcccttaat |
107 |
Q |
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| T |
27036334 |
aaacaaagaccacatgtgttgttcaaatccggaatagttagcccaactagtttgagttaaagaataaaaactccgaggttgcaagtttcaatcctttaat |
27036433 |
T |
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| Q |
108 |
ctaacaatttgcgatttagnnnnnnnnnnnnnnnttt-----gtttctttttacaaaatatattcaattaatatacctcactcttcaaatgtgattgcat |
202 |
Q |
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| T |
27036434 |
ctaacaatttgcgatttagaaaaaaaaagaaagatattttccgtttctttttaaaaaatatattcaattaatatacctcactcttcaaatgtgattgcat |
27036533 |
T |
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| Q |
203 |
tgtgttgctgctattgtgaacatttctatttttgcaatgcatgatgaattcgaagcggcataaatt |
268 |
Q |
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| T |
27036534 |
tgtgttgctgctattgtgaacatttctatttttgcaatgcatgatgaattcgaagcggcataaatt |
27036599 |
T |
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