View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11557A_low_227 (Length: 255)
Name: NF11557A_low_227
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_227 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 137 - 255
Target Start/End: Original strand, 31626275 - 31626393
Alignment:
| Q |
137 |
aatcattgcatttcttctattcattaataatttttctattaaaccaaatattttgactccattgagagtaattaaccatcaaacgtacaaaattcagcaa |
236 |
Q |
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| T |
31626275 |
aatcagtgcatttcttctattcattaataattcttctatttaaccaaatattttgactccattaagagtaattaaccatcaaacgcacaaaattcagcaa |
31626374 |
T |
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| Q |
237 |
acgacgtcgtacattatta |
255 |
Q |
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||||||||||||||||||| |
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| T |
31626375 |
acgacgtcgtacattatta |
31626393 |
T |
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