View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11557A_low_245 (Length: 251)
Name: NF11557A_low_245
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_245 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 43030922 - 43031157
Alignment:
| Q |
1 |
ttatttgtggtactttggctgcaagtacttctaagcacacaaatattccttcatcatctccatgatgatagctactgttttatttagtggtagtagtgac |
100 |
Q |
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| T |
43030922 |
ttatttgtggtactttggctgcaagtacttctaagtacacaaatattccttcatcatctccatgatgatagctactgttttatttagtggtagtagtgac |
43031021 |
T |
|
| Q |
101 |
atttttatagattatattagttaatgctaccaatttaatccatatagcctgttaagtttactttattctttaaatttttgttacacatattatattagtg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
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| T |
43031022 |
atttttatagattatattagttaatgctaccaatttaatccatatagcctgttaagtttactttatttttttaatttttgttacacatattatattagtg |
43031121 |
T |
|
| Q |
201 |
agctatacttggttcacggatatgatctgccttgat |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43031122 |
agctatacttggttcacggatatgatctgccttgat |
43031157 |
T |
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