View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11557A_low_412 (Length: 223)
Name: NF11557A_low_412
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_412 |
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Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 47102270 - 47102068
Alignment:
| Q |
1 |
atataagaaagtaaaaatacaaacagttatatcataaaaggaagaaaaactagctagttccaacgactgcgcaacaaagttaagcacaacatttatttga |
100 |
Q |
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| T |
47102270 |
atataagaaagtaaaaatacaaacagttatatcataaaaggaagaaaaactagctagttccaacgactgcgcaacaaagttaagcacaacatttatttga |
47102171 |
T |
|
| Q |
101 |
tagggtacttgtttaggtgaaaacgtttaatagtttgttgtactggctaaactttgagttaatcttttagttcgatcgccgacagtgtacgtacacttaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47102170 |
tagggtacttgtttaggtgaaaacgtttaatagtttgttgtactggctaaactttgagttaatcttttagttcgatcgccgacagtgtacgtacacttaa |
47102071 |
T |
|
| Q |
201 |
tca |
203 |
Q |
| |
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||| |
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| T |
47102070 |
tca |
47102068 |
T |
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