View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11557A_low_436 (Length: 214)
Name: NF11557A_low_436
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_436 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 6307377 - 6307200
Alignment:
| Q |
21 |
aagtacaggaaaggtaagaagttgatttctttgtctgcaattttataggtatacatgatccaagaacaaaatgagtgaaagatgtgcacgggggtttgaa |
120 |
Q |
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| T |
6307377 |
aagtacaggaaaggtaagaagttgatttctttgtctgcaattttataggtatacatgatccaagaacaaaatgagtgaaagatgtgcacgggggtttgaa |
6307278 |
T |
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| Q |
121 |
aatatgtataactttttatcattacttagccaagttcattgaactctaatgagaaacagttttgtgcggttagatatt |
198 |
Q |
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| T |
6307277 |
agtatgtataactttttatcattacttagccaagttcattgaactctaatgagaaacagttttgtgcagttagatatt |
6307200 |
T |
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