View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11557A_low_439 (Length: 213)
Name: NF11557A_low_439
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_439 |
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Alignment Details
Target: chr7 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 25633524 - 25633365
Alignment:
| Q |
44 |
gcagcctaagcaactacatctaacagatcttagctacactatagcatatgatagcttaattaatgtacacaaacatatgtctatatatacttgctgtaac |
143 |
Q |
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|||||||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25633524 |
gcagcctaagcaactagatctaagagtacttagctacactatagtatatgatagcttaattaatgtacacaaacatatgtctatatatacttgctgtaac |
25633425 |
T |
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| Q |
144 |
agat--acttcattaatgagaataatacttttccatacatttttctggtttcctaatatt |
201 |
Q |
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|||| ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |
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| T |
25633424 |
agatacacttcatcaatgagaataatacttctccattcatttttctggtttcctaatatt |
25633365 |
T |
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