View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11557A_low_460 (Length: 207)
Name: NF11557A_low_460
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_460 |
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Alignment Details
Target: chr3 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 51720454 - 51720315
Alignment:
| Q |
55 |
aatatacacacacctataatataatttcttttttaagaggagaacacac----caataatatattcatcatatgtaggatcattatcaaatacacaccta |
150 |
Q |
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| T |
51720454 |
aatatacacacacctataatataatttcttttttaagaggagaacacacacaccaataatatattcatcatatgtaggatcattatcaaatacacaccta |
51720355 |
T |
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| Q |
151 |
taatatatccaagttgttgtgtaaaccatatcatactttt |
190 |
Q |
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| T |
51720354 |
taatatattcaagttgttgtgtaaaccatatcatactttt |
51720315 |
T |
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