View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11557A_low_49 (Length: 382)
Name: NF11557A_low_49
Description: NF11557A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11557A_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 92 - 244
Target Start/End: Complemental strand, 4885013 - 4884861
Alignment:
| Q |
92 |
gctacgttggttgtgtcttctgatcagtacttgactgagattctgtctgagaaggtttgtagtcagagagatagaagaagaggacgtgttgctgtgtgga |
191 |
Q |
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| T |
4885013 |
gctacgttggttgtttcttctgatcagtacttgactgagattctgtctgagaaggtttgtagtcagagagacagaagaagaggacgtgttgctgtgtgga |
4884914 |
T |
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| Q |
192 |
gacctcatttggagagtatttctgagtcaccaacaaatcatctataacggttg |
244 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4884913 |
gacctcatttggagagtatttctgagtcaccaacaaatcatctataacggttg |
4884861 |
T |
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