View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11558_high_30 (Length: 246)
Name: NF11558_high_30
Description: NF11558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11558_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 14161864 - 14162081
Alignment:
| Q |
18 |
aaaccagaatacagctactattttgtcaaaaagcttgtctcaatgtcaatggacagacacgacaaagaaaaagaaatggctgcaattctcttatctgcac |
117 |
Q |
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| T |
14161864 |
aaaccagaatacagctactattttgtcaaaaagcttgtctcaatgtcaatggacagacacgacaaagaaaaagaaatggctgcaattctcttatctgcac |
14161963 |
T |
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| Q |
118 |
tttatgctgacataattcatccttcacaagtttacaaaggattcaccaaattagtcgaatcggctgatgatttgattgtagatataccggacacggttga |
217 |
Q |
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| T |
14161964 |
tttatgctgacataattcatccttcacaagtttacaaaggattcaccaaattagtcgaatcggctgatgatttgattgtagatataccggacacggttga |
14162063 |
T |
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| Q |
218 |
tattctagcacttttcat |
235 |
Q |
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|||||||||||||||||| |
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| T |
14162064 |
tattctagcacttttcat |
14162081 |
T |
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