View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11558_low_28 (Length: 253)
Name: NF11558_low_28
Description: NF11558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11558_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 31224865 - 31224640
Alignment:
| Q |
18 |
ttatggaaccataatctgaatgaggatggattcctaaggtgagtcctggttcaggacatgtagggtagcagttcactgctactacttgtgaccctccatt |
117 |
Q |
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| T |
31224865 |
ttatggaaccataatctgaatgaggatggattcctaaggtgagtcctggttcaggacatgtagggtagcagttcactgctactacttgtgaccctccatt |
31224766 |
T |
|
| Q |
118 |
tatttcttcatgcaagtaactttggtttaatcctaggctttcaaatattatttccattaatttgttttgtaaaacttgtgctgccactgcatactttccc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31224765 |
tatttcttcatgcaagtaactttggtttaatcctaggctttcaaatattatttccattaatttgttttgtaaaacttgtgctgccactgcatactttccc |
31224666 |
T |
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| Q |
218 |
atcttctccctatcaaaaacattcat |
243 |
Q |
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|||||||||||||||||||||||||| |
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| T |
31224665 |
atcttctccctatcaaaaacattcat |
31224640 |
T |
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