View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11559_low_16 (Length: 220)

Name: NF11559_low_16
Description: NF11559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11559_low_16
NF11559_low_16
[»] chr7 (10 HSPs)
chr7 (15-203)||(11277254-11277442)
chr7 (15-203)||(29967925-29968113)
chr7 (15-203)||(47876933-47877121)
chr7 (15-203)||(37919494-37919682)
chr7 (15-203)||(235439-235629)
chr7 (15-196)||(4938130-4938311)
chr7 (15-197)||(17720591-17720773)
chr7 (46-128)||(18532653-18532735)
chr7 (46-102)||(25619510-25619566)
chr7 (46-128)||(37254783-37254865)
[»] chr5 (21 HSPs)
chr5 (16-203)||(23238334-23238521)
chr5 (29-203)||(8227976-8228150)
chr5 (15-197)||(28535677-28535859)
chr5 (15-196)||(30732316-30732497)
chr5 (15-196)||(12825156-12825337)
chr5 (15-197)||(35983793-35983975)
chr5 (15-197)||(27117163-27117345)
chr5 (15-196)||(42513677-42513858)
chr5 (15-203)||(42928081-42928269)
chr5 (46-203)||(19255155-19255313)
chr5 (15-152)||(31641513-31641649)
chr5 (15-128)||(33385376-33385489)
chr5 (46-142)||(25857457-25857553)
chr5 (15-142)||(8300184-8300311)
chr5 (15-128)||(27767067-27767180)
chr5 (99-196)||(12820035-12820132)
chr5 (47-128)||(10776789-10776870)
chr5 (50-128)||(18089798-18089876)
chr5 (15-128)||(18359094-18359207)
chr5 (48-170)||(27795466-27795588)
chr5 (17-93)||(27165956-27166032)
[»] chr8 (17 HSPs)
chr8 (19-203)||(32266514-32266698)
chr8 (15-203)||(13396338-13396526)
chr8 (15-203)||(41665371-41665559)
chr8 (15-196)||(7924343-7924524)
chr8 (15-196)||(8299760-8299941)
chr8 (15-197)||(9922557-9922739)
chr8 (15-194)||(172062-172241)
chr8 (15-142)||(20824307-20824434)
chr8 (15-128)||(2170367-2170480)
chr8 (15-128)||(37434157-37434270)
chr8 (15-195)||(13200081-13200261)
chr8 (46-128)||(17699507-17699589)
chr8 (61-195)||(34137011-34137145)
chr8 (46-142)||(43270461-43270557)
chr8 (15-170)||(13879489-13879644)
chr8 (81-183)||(2529856-2529958)
chr8 (46-86)||(5181737-5181777)
[»] scaffold0472 (1 HSPs)
scaffold0472 (15-203)||(3202-3390)
[»] chr6 (13 HSPs)
chr6 (15-203)||(2553587-2553775)
chr6 (15-203)||(18651236-18651424)
chr6 (15-203)||(24767426-24767614)
chr6 (37-197)||(12734081-12734241)
chr6 (15-157)||(21168194-21168337)
chr6 (48-185)||(14373026-14373163)
chr6 (46-142)||(17579114-17579210)
chr6 (15-182)||(15958815-15958982)
chr6 (46-142)||(17573688-17573784)
chr6 (46-128)||(17606367-17606449)
chr6 (15-128)||(10577251-10577364)
chr6 (15-128)||(21630109-21630222)
chr6 (15-128)||(20883035-20883148)
[»] chr3 (17 HSPs)
chr3 (15-203)||(34332817-34333005)
chr3 (15-200)||(40930530-40930715)
chr3 (15-196)||(2364234-2364415)
chr3 (15-196)||(7312733-7312914)
chr3 (15-197)||(19920231-19920413)
chr3 (15-156)||(10323573-10323714)
chr3 (46-200)||(26771022-26771176)
chr3 (15-128)||(29523747-29523860)
chr3 (15-128)||(11203844-11203957)
chr3 (45-182)||(7032289-7032426)
chr3 (15-128)||(12342228-12342340)
chr3 (47-128)||(33496572-33496653)
chr3 (51-142)||(7031055-7031146)
chr3 (52-92)||(16179009-16179049)
chr3 (46-102)||(35214404-35214460)
chr3 (50-107)||(15312629-15312686)
chr3 (46-98)||(19890733-19890785)
[»] chr4 (17 HSPs)
chr4 (15-203)||(1828542-1828730)
chr4 (15-197)||(15740177-15740359)
chr4 (15-197)||(47685897-47686079)
chr4 (15-203)||(19755214-19755405)
chr4 (15-203)||(19784401-19784592)
chr4 (15-203)||(7403863-7404051)
chr4 (15-196)||(13270893-13271074)
chr4 (15-196)||(23642593-23642774)
chr4 (15-156)||(47418801-47418942)
chr4 (46-128)||(45472742-45472824)
chr4 (48-149)||(11587233-11587334)
chr4 (15-128)||(12697838-12697951)
chr4 (46-156)||(20002722-20002832)
chr4 (46-128)||(55725719-55725801)
chr4 (17-107)||(8361146-8361236)
chr4 (15-128)||(2822039-2822152)
chr4 (52-92)||(5790131-5790171)
[»] chr1 (10 HSPs)
chr1 (15-196)||(51052437-51052618)
chr1 (15-196)||(11909107-11909288)
chr1 (15-196)||(6050560-6050741)
chr1 (15-156)||(35541046-35541187)
chr1 (15-180)||(47623079-47623244)
chr1 (46-142)||(16917842-16917938)
chr1 (46-128)||(43388392-43388474)
chr1 (46-128)||(37191243-37191325)
chr1 (46-91)||(28351776-28351821)
chr1 (55-107)||(22191823-22191875)
[»] scaffold0369 (1 HSPs)
scaffold0369 (15-197)||(11207-11389)
[»] chr2 (10 HSPs)
chr2 (15-196)||(4552126-4552307)
chr2 (46-203)||(41206966-41207123)
chr2 (48-194)||(28252679-28252825)
chr2 (46-182)||(17764995-17765131)
chr2 (46-195)||(15917612-15917761)
chr2 (46-128)||(12645561-12645643)
chr2 (15-128)||(40176693-40176806)
chr2 (48-128)||(14439777-14439857)
chr2 (46-128)||(38604407-38604489)
chr2 (46-102)||(10999984-11000040)
[»] scaffold0034 (1 HSPs)
scaffold0034 (15-196)||(105845-106026)


Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 11277254 - 11277442
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  11277254 gacatcacaggagcaaccccagttacaccataatatggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgacttttgaga 11277353  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11277354 gatcggttacctacgaaaaataatttggcaaaccgtggcattttacctttggaggcgcggttgtgtgtttctggatgtgggaacgttga 11277442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 29968113 - 29967925
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  29968113 gacatcacaggagcaaccccagttacaccatagtatggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttgaggacttttgaga 29968014  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29968013 gatcggttacctacgaaaagtaatttggcaaaccatggcattttacctttggaggcgcggttgtgtgtttctggatgtgggaacgttga 29967925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 47877121 - 47876933
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  47877121 gacatcacaggagcagccccagttacatcaaaatagggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgacttctgaga 47877022  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  47877021 gatcagttacctacaaaaaataatttggcaaaccgtggcattttacctttggaggcgcggttgtgtgtttctggatgcgggaacgttga 47876933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 37919682 - 37919494
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||  |||| ||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||  |||||    
T  37919682 gacatcacaggagcagccccaattacatcatcatatgaagttaatttggtataaacaggttcctctcaaagtatctatccttgcttggcgactcctgaga 37919583  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    ||| |||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||| | ||||||||||||||    
T  37919582 gattggttacctacaaaaaataatttggcaaaccgttgcattttacctttggaggcgcggttgtgtgtttctagttgtgggaacgttga 37919494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 235439 - 235629
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||| || ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||| ||||| ||||     
T  235439 gacatcacaggagcagccccagttacatcaaaatatggagttaatttggcataaacaggttcatctcaaagtctctatccttgcttggcgacttctgagg 235538  T
Q  115 gatcggttacctac--gaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    ||||||||||||||   |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||    
T  235539 gatcggttacctacaaaaaaaatcatttggcaaaccgtggcattttacctttggaggcgcggttgtgtgtttctggttgcgagaacgttga 235629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 4938130 - 4938311
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||     
T  4938130 gacatcacaggagcagccccagttacaccataatgtggacttaatttggcataaacaggtccctctcaaagtctctatccttgcttggcgactaatgagg 4938229  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| || ||| ||||||||||||    
T  4938230 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgcgttgctggatgtggga 4938311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 17720773 - 17720591
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| || ||  |||| || ||  |||||||||||||||||| |||||| ||||||||||| ||||||||||| ||| ||||| ||||     
T  17720773 gacatcacaggagcagcctcacttacatcaaaacttggagttaatttggcatacacaggttcctctcaaagtttctatccttgcatggcgacttctgagg 17720674  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
    |||||||||||||| |||  |||||||||||||||||||||||||| | ||||||||||| ||||||||||| | ||||||||    
T  17720673 gatcggttacctacaaaagataatttggcaaaccgtggcattttacctctggaggcgcggatgtgtgtttctagttgtgggaa 17720591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 18532735 - 18532653
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||||| | |||||||||||| ||| | ||||| | ||||||||||||| |||| ||||| ||||| ||||||||    
T  18532735 aatatggagttaatctcgcataaacaggttcctttaaaagtttatatccttgcttggcgactgttgagggatcgtttacctac 18532653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 25619566 - 25619510
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttgg 102  Q
    |||||||||||||| |||||||||||||| ||| | ||||| |||||||||||||||    
T  25619566 aatatggagttaatatggcataaacaggttcctttaaaagtttctatccttgcttgg 25619510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 37254865 - 37254783
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||||| ||||||||||||||  || | ||||| || |||||||||||| |  | ||||| ||||| ||||||||    
T  37254865 aatatggagttaatctggcataaacaggttactttaaaagtttcaatccttgcttggcggttgttgagggatcgtttacctac 37254783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 8e-88; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 23238521 - 23238334
Alignment:
Q  16 acatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagag 115  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||    
T  23238521 acatcacaggagcaaccccagttacaccataatatggagttaatttggcataaataggttcctctcaaagtttctatccttgcttggagacttttgagag 23238422  T
Q  116 atcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  23238421 atcggttacctacgaaaagtaatttggcaaaccgtggcattttagctttggaggcgcggttgtgtgtttctggatgtgggaacgttga 23238334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 29 - 203
Target Start/End: Complemental strand, 8228150 - 8227976
Alignment:
Q  29 aaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8228150 aaccccagttacaccataatatggagttaatttgacataaacaggttcctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 8228051  T
Q  129 gaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  8228050 gaaaagtaatttggcaaaccgtgacattttacctttggaggcgcggttgtgtgtttctggatgtgagaacgttga 8227976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 28535677 - 28535859
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| || ||| |||| || || ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||| ||||| ||||     
T  28535677 gacatcacaggagcagcctcagttacatcaaaacatggagttaatttggcatacacaggttcctctcaaagtttctatccttgcttggcgacttctgagg 28535776  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| | ||||||||||||| ||||||||    
T  28535777 gatcggttacctacaaaaaataatttggcaaaccgtggcattttacctttggaggcgcagatgtgtgtttctggttgtgggaa 28535859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 30732316 - 30732497
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||     
T  30732316 gacatcacaggagcagccccagttacaccataatatggacttaatttggcataaacaggttcctctcaaagtatctatctttgcttggcgacttctgagg 30732415  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| |||||||||||||||||||    
T  30732416 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgtgtttctggatgtggga 30732497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 12825337 - 12825156
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||||||| ||||| ||||     
T  12825337 gacatcacaggagcagccccagttacaccataatatggacttaatttggcataaacaagttcctctcaaagtatgtatccttgcttggcgacttctgagg 12825238  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| |||||||||||||||||||    
T  12825237 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgtgtttctggatgtggga 12825156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 35983793 - 35983975
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| || ||| |||| || || |||||||||||||||| || |||||| ||||||||||||||||||||||||||| ||||| ||||     
T  35983793 gacatcacaggagcagcctcagttacatcaaaacatggagttaatttggcttacacaggttcctctcaaagtatctatccttgcttggcgacttctgagg 35983892  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
     ||||||||||||| |||| |||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||||||||    
T  35983893 aatcggttacctacaaaaaataatttggcaaaccatgacattttacctttggaggcgcggttgtgtgtttttggttgtgggaa 35983975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 27117163 - 27117345
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||||||   |||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||     
T  27117163 gacatcacaggagcagatccagttacaccataatatggacttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgacttctgagg 27117262  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
    || |||||||| || |||  |||||||| ||||||||||||| ||  | |||||| |||||| ||||||||||| ||||||||    
T  27117263 gaccggttacccacaaaacttaatttggtaaaccgtggcattctatctatggaggagcggttatgtgtttctggctgtgggaa 27117345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 42513858 - 42513677
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||     
T  42513858 gacatcacaggagcagccccagttacaccataatgtggacttaatttggcataaacaggtccctctcaaagtctctatccttgcttggcgactaatgagg 42513759  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| |||| |||| ||  | |||||| |||||| || ||| ||||||||||||    
T  42513758 gatcggttacctacaaaacttaatttggcaaatcgtgacattctatctgtggaggagcggttatgcgttgctggatgtggga 42513677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 42928269 - 42928081
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||| ||||| || |||||| |||| |  |||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||| | ||| ||||     
T  42928269 gacatcgcaggaacagccccagttacatccaaatatggagttaatttggtataaacaggttcctctcaaagtctctatccttgtttggcggcttctgagg 42928170  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    ||||||||| |||| |||| ||||||| ||||| ||||||||||||  ||||||| |||||||||||| |||||||| |||||||||||    
T  42928169 gatcggttaactacaaaaaataatttgacaaactgtggcattttacccttggaggtgcggttgtgtgtctctggatgcgggaacgttga 42928081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 19255155 - 19255313
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaa 145  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| |  || |||| |||||||||||||| |||| |||||||||||    
T  19255155 aatatggagttaatttggcataaacagatttctctcaaagtatctatccttgcttggcggtttctgagggatcggttacctacaaaaaataatttggcaa 19255254  T
Q  146 accgtggcattttacttttggag-gcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |  |||||||| | |  |||||| ||||||||||||||  ||||||| ||| |||||||    
T  19255255 attgtggcattattcccttggagcgcgcggttgtgtgtcactggatgcgggcacgttga 19255313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 31641649 - 31641513
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| || ||  |||| || || ||||||||||||||||||| |||||| ||||| ||||| ||||||||||| ||||||||  ||||     
T  31641649 gacatcacaggagcagcctcacttacatcaaaacatggagttaatttggcatacacaggttcctct-aaagtttctatccttgcatggagactactgagg 31641551  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtgg 152  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  31641550 gatcggttacctacaaaaaataatttggcaaaccgtgg 31641513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 33385376 - 33385489
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| || || || || ||||||||||||||||||||||||||||| ||  | ||||| ||||||||||||||| |||| |||||     
T  33385376 gacatcacaggaacaacctcatattcatcaaaatatggagttaatttggcataaacaggttcccttaaaagtttctatccttgcttggcgactgttgagg 33385475  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  33385476 gatcgtttacctac 33385489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 25857457 - 25857553
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttgg 142  Q
    ||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||| |||| ||||| ||||| |||||||| |||  ||||||||    
T  25857457 aatatggagttaatttggcataaacaggttcctttaaaagtttctatccttgcttggcgactgttgagggatcgcttacctactaaatctaatttgg 25857553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 8300184 - 8300311
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || ||||||||||||||||||||||||||||| ||| | ||||| |||||||||| |||| |||| |||||     
T  8300184 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatttggcataaacaggttcctttaaaagtttctatccttgtttggcgactgttgagg 8300283  T
Q  115 gatcggttacctacgaaaagtaatttgg 142  Q
    ||||| |||||||| |||  ||||||||    
T  8300284 gatcgcttacctactaaatctaatttgg 8300311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 27767180 - 27767067
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || ||||||||||||||||||||||||||||| ||| | ||||| | ||||||||||||| |||| |||||     
T  27767180 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatttggcataaacaggttcctttaaaagtttatatccttgcttggcgactgttgagg 27767081  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  27767080 gatcgtttacctac 27767067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 12820035 - 12820132
Alignment:
Q  99 ttggagacttttgagagatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||| ||||| |||| |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| |||||||||||||||||||    
T  12820035 ttggcgacttatgagggatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgtgtttctggatgtggga 12820132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 10776870 - 10776789
Alignment:
Q  47 atatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||||||||||||||||||| ||  | ||||| ||||||||||||||| ||||  |||| ||||| ||||||||    
T  10776870 atatggagttaatttggcataaacaggttcccttaaaagtttctatccttgcttggcgactgctgagggatcgtttacctac 10776789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 18089798 - 18089876
Alignment:
Q  50 tggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||||||| |||||||| ||  | ||||| |||||| |||||||  |||| ||||||||||| ||||||||    
T  18089798 tggagttaatttggcacaaacaggtaccgttgaaagtctctatctttgcttgacgactattgagagatcgtttacctac 18089876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 18359094 - 18359207
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || |||||||||||||| | |||||||||||| ||| | ||||| || |||||||||||| |  | |||||     
T  18359094 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatctagcataaacaggttcctttaaaagtttcaatccttgcttggcggttgttgagg 18359193  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  18359194 gatcgtttacctac 18359207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 27795588 - 27795466
Alignment:
Q  48 tatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaaac 147  Q
    |||||||||| | ||||| |||||||| |||||||||||  |  || |||||||| |  | ||||| ||||| || ||||| |||   |||||||||||     
T  27795588 tatggagttagtctggcacaaacaggtacctctcaaagttacagtctttgcttggcggttgttgagggatcgtttgcctactaaagccaatttggcaaat 27795489  T
Q  148 cgtggcattttacttttggaggc 170  Q
    |||||||||||||  ||||||||    
T  27795488 cgtggcattttaccgttggaggc 27795466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 27165956 - 27166032
Alignment:
Q  17 catcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatc 93  Q
    |||||||||| |||||| |  |||| || |||||||| |||||||||||  ||||||| ||||| ||||| ||||||    
T  27165956 catcacaggaacaacccaatttacatcaaaatatggaattaatttggcaccaacaggtacctctaaaagtctctatc 27166032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 32266698 - 32266514
Alignment:
Q  19 tcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatc 118  Q
    ||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32266698 tcacaagagcaaccacagttacaccataatttggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggagacttttgagagatc 32266599  T
Q  119 ggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32266598 ggttacctacgaaaagtaatttggcaaaccgtggcattttacctttggaggcgcggttgtgtgtttctggatgtgggaacgttga 32266514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 13396526 - 13396338
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||  |||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||  |||||    
T  13396526 gacatcacaggagcagccccaattacatcatcatatggagttaatttggcataaacaagttcctctcaaagtatctatccttgcttggcgactcctgaga 13396427  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13396426 gatcggttacctacaaaaaataatttggcaaaccgtggcattttacctttggaggcgcggttgtgtgtttctggatgtgggaacgttga 13396338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 41665371 - 41665559
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||  |||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |  | |||    
T  41665371 gacatcacaggagcagccccaattacatcatcatatggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgattcctaaga 41665470  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||| ||||||||| |||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41665471 gatcagttacctacaaaaaataatttggcaaaccatgacattttacctttggaggcgcggttgtgtgtttctggatgtgggaacgttga 41665559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 7924524 - 7924343
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||     
T  7924524 gacatcacaggagcagccccagttacaccataatgtggacttaatttggcataaacaggtccctctcaaagtctctatccttgcttggcgactaatgagg 7924425  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| || ||| ||||||||||||    
T  7924424 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgcgttgctggatgtggga 7924343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 8299941 - 8299760
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||| | |||||  ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||     
T  8299941 gacatcacaggagtagccccaattacaccataatttggacttaatttggcataaacaggtccctctcaaagtatctatccttgcttggcgactactgagg 8299842  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| ||| || |||||| ||||||||||||    
T  8299841 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcgattatgtgttgctggatgtggga 8299760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 9922739 - 9922557
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| || ||  |||| || ||  |||||||||||||||||| |||||| ||||||||||| ||||||||||| ||  ||||| ||||     
T  9922739 gacatcacaggagcagcctcacttacatcaaaacttggagttaatttggcatacacaggttcctctcaaagtttctatccttgcatgacgacttctgagg 9922640  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
    |||||||||||||| |||  |||||||||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||    
T  9922639 gatcggttacctacaaaagataatttggcaaaccgtggcattttacctctggaggcgcggatgtgtgtttctggttgtgggaa 9922557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 172241 - 172062
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||||||   |||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||     
T  172241 gacatcacaggagcagaaccagttacaccataaaatggacttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgacttctgagg 172142  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgg 194  Q
    || |||||||| || |||  |||||||| |||||||| |||| ||  | |||||| |||||| ||||||||||| |||||    
T  172141 gaccggttacccacaaaacttaatttggtaaaccgtgacattctatctatggaggagcggttatgtgtttctggctgtgg 172062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 20824434 - 20824307
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || ||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||| |||| |||||     
T  20824434 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatttggcataaacaggttcctttaaaagtttctatccttgcttggcgactgttgagg 20824335  T
Q  115 gatcggttacctacgaaaagtaatttgg 142  Q
    ||||| |||||||| |||  ||||||||    
T  20824334 gatcgcttacctactaaatctaatttgg 20824307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 2170480 - 2170367
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || |||||||||||||| |||||||||||||| ||| | ||||| ||||||||||||||| |||  |||||     
T  2170480 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatctggcataaacaggttcctttaaaagtttctatccttgcttggcgaccgttgagg 2170381  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  2170380 gatcgtttacctac 2170367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 37434270 - 37434157
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || |||||||||||||||||||||||||| || ||| | ||||| ||||| ||||||||| |||| |||||     
T  37434270 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatttggcataaacatgttcctttaaaagtctctattcttgcttggcgactgttgagg 37434171  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  37434170 gatcgtttacctac 37434157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 13200261 - 13200081
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || |||||||||||| |||||||||||||||| ||||| ||||| || ||||||||||||   || |||||     
T  13200261 gacatcacaggaacaacctcatgttcatcaaaatatggagttagtttggcataaacaggttcctctaaaagtttcaatccttgcttggcagctattgagg 13200162  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggg 195  Q
    ||||| |||||||| |||   ||||||||| | ||  | ||| ||| | ||||||| ||||| |||||| |||| ||||||    
T  13200161 gatcgtttacctacaaaatacaatttggcagagcgcagaattctacctatggaggctcggttttgtgttactgggtgtggg 13200081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 17699589 - 17699507
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    ||||||||||||||||||||||||||||| ||  | ||||| ||||||||||||||| ||||  |||| ||||| ||||||||    
T  17699589 aatatggagttaatttggcataaacaggttcccttaaaagtttctatccttgcttggcgactgctgagggatcgtttacctac 17699507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 195
Target Start/End: Original strand, 34137011 - 34137145
Alignment:
Q  61 tggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaaaccgtggcattttac 160  Q
    |||||||||||||| ||||||||||| ||||| ||||||||| | ||| |||  ||||| ||||||||||||   |||||||||||||| || ||  | |    
T  34137011 tggcataaacaggtacctctcaaagtctctattcttgcttggcggcttatgatggatcgtttacctacgaaagaaaatttggcaaaccgcggtatcattc 34137110  T
Q  161 ttttggaggcgcggttgtgtgtttctggatgtggg 195  Q
     | |||||| ||||||||||| | |||| ||||||    
T  34137111 ctgtggaggggcggttgtgtgctactggttgtggg 34137145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 43270557 - 43270461
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttgg 142  Q
    ||||||||||| || |||||||||||||| ||| | ||||| ||||||||| ||||| |||| ||||  ||||| || ||||| ||||  |||||||    
T  43270557 aatatggagttcatctggcataaacaggttcctttaaaagtttctatccttacttggcgactgttgaaggatcgtttgcctactaaaacaaatttgg 43270461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 13879489 - 13879644
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||| || || ||||| ||||| || || | |||||||||| | ||||| ||| |||| |||||||||||  |  || |||||||| |  | |||||     
T  13879489 gacatcgcatgaacaacctcagattcatcaaagtatggagttagtctggcacaaataggtacctctcaaagttacagtctttgcttggcggttgttgagg 13879588  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggc 170  Q
    ||||| |||||||| |||   ||||||||||| |||||||||||||  ||||||||    
T  13879589 gatcgtttacctactaaagccaatttggcaaatcgtggcattttaccgttggaggc 13879644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 2529958 - 2529856
Alignment:
Q  81 caaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgt 180  Q
    |||||| || |||||||||||| | || ||||| ||||| |||||||| |||   ||||||| | | ||||| ||| ||||||||||||| ||||| |||    
T  2529958 caaagtttcaatccttgcttggcggctattgagggatcgcttacctacaaaatacaatttggtagatcgtggaattctacttttggaggctcggttttgt 2529859  T
Q  181 gtt 183  Q
    |||    
T  2529858 gtt 2529856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 5181777 - 5181737
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagt 86  Q
    ||||||||| ||||||||||||||||||| ||||| |||||    
T  5181777 aatatggagataatttggcataaacaggtgcctctaaaagt 5181737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 3390 - 3202
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||    
T  3390 gacatcacaggagcaaccctagttacaccataatatggagttaatttggcataaacaggttcctcttaaagtttctatccttgcttggagacttttgaga 3291  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3290 gatcggttacctacgaaaagcaatttggcaaaccatggcattttacctttggaggcgcggttgtgtgtttctggatgtgggaacgttga 3202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 7e-79; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 2553775 - 2553587
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |    
T  2553775 gacatcacaagagcagccccagttacaccataatatggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgacttttgaaa 2553676  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  2553675 gatcggttacctacaaaaaataatttggcaaaccgtggcattttacctttggaggcgcagttgtgtgtttctggatgtgggaacgttga 2553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 18651236 - 18651424
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| || | || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||     
T  18651236 gacatcacaggagcagccccagttagatcaaaatatggagttaatttggcataaacaggttcctctcaaagtctctatccttgcttggcgacttctgagg 18651335  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||| |||| |||||||| ||||||||| ||||||| |||||| |||||||||||||| |||||||| |||| ||||||    
T  18651336 gatcggttacctacaaaaaataatttggaaaaccgtgggattttacctttggatgcgcggttgtgtgtctctggatgcgggaccgttga 18651424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 24767426 - 24767614
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| ||| || |||| || |||||||||||||||| |||||||||||| ||| ||||||| ||||||||||||||  ||||| | ||     
T  24767426 gacatcacaggagcagccctagttacatcaaaatatggagttaattttgcataaacaggttcctatcaaagtctctatccttgcttgacgacttcttagg 24767525  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| || |||||||||||    
T  24767526 gatcggttacctacaaaaaataatttggcaaatcgtggcattttacctttggaggcgcggttgtgtgtttttggttgcgggaacgttga 24767614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 12734241 - 12734081
Alignment:
Q  37 atacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagta 136  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||||| |||  ||    
T  12734241 atacatcataatatggatttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgacttctgagggatcggttacctacaaaactta 12734142  T
Q  137 atttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
    |||||| || |||||||||| ||  | |||||| |||||| ||||||||| ||||||||||    
T  12734141 atttggtaacccgtggcattctatctctggaggagcggttatgtgtttctagatgtgggaa 12734081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 21168337 - 21168194
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||  |    
T  21168337 gacatcacaggagcagccccagttacaccataatatggagttaatttggcataaataggttcctctcaaagtatctatcctagcttggagacttttgcaa 21168238  T
Q  115 gatcggttacctac-gaaaagtaatttggcaaaccgtggcattt 157  Q
    ||||| ||||||||  ||||  || |||||||||||||||||||    
T  21168237 gatcgattacctacaaaaaaaaaaattggcaaaccgtggcattt 21168194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 14373026 - 14373163
Alignment:
Q  48 tatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcgg-ttacctacgaaaagtaatttggcaaa 146  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||   |||||||| || ||| |||||||||||| | |||||||||||    
T  14373026 tatggatttaatttggcataaacaggtacctctaaaagtatctattcttgcttggcagcttttgag-gaacggcttacctacgaaaggaaatttggcaaa 14373124  T
Q  147 ccgtggcattttacttttggaggcgcggttgtgtgtttc 185  Q
    |||||||||| |   | |||||| |||||||||||||||    
T  14373125 ccgtggcattatttctatggaggggcggttgtgtgtttc 14373163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 17579114 - 17579210
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttgg 142  Q
    ||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||| |||| ||||| ||||| |||||||| |||  ||||||||    
T  17579114 aatatggagttaatttggcataaacaggttcctttaaaagtttctatccttgcttggcgactgttgagggatcgcttacctactaaatctaatttgg 17579210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 15958815 - 15958982
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||  ||| |||| |  |||||| ||||||| |||||||||||||| ||||| ||||| ||||| ||||||||| | ||||||||     
T  15958815 gacatcacaggaacaacttcagttacatccaaatatgaagttaatatggcataaacaggttcctcttaaagtctctattcttgcttggcggcttttgagg 15958914  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgt 182  Q
    ||||  ||||||||||||   ||||||||||||| ||| ||  | | |||||||| || |||||||||    
T  15958915 gatcatttacctacgaaagcaaatttggcaaaccatggtatcattcctttggaggtgcagttgtgtgt 15958982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 17573688 - 17573784
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttgg 142  Q
    ||||||||||||||||||||||||||||| ||| | ||||  ||||||||||||||| |||| ||||| ||||| |||||||| |||  ||||||||    
T  17573688 aatatggagttaatttggcataaacaggttcctttaaaagattctatccttgcttggcgactgttgagggatcgcttacctactaaatctaatttgg 17573784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 17606367 - 17606449
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    ||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||| |||| ||||| ||||  ||||||||    
T  17606367 aatatggagttaatttggcataaacaggttcctttaaaagtttctatccttgcttggcgactgttgagggatcatttacctac 17606449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 10577251 - 10577364
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || ||||| ||||||||||||||||||||||| ||| | ||||| | ||||||||||||| |||| |||||     
T  10577251 gacatcacaggaacaacctcatgttcatcaaaatatagagttaatttggcataaacaggttcctttaaaagtttatatccttgcttggcgactgttgagg 10577350  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  10577351 gatcgtttacctac 10577364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 21630109 - 21630222
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || ||||||||||||||||||||||| ||||| ||| | ||||| |||||||||| |||| |||| |||||     
T  21630109 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatttggcataaccaggttcctttaaaagtttctatccttgtttggcgactattgagg 21630208  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  21630209 gatcgtttacctac 21630222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 20883035 - 20883148
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || |||||||||||||| ||||||||| |||| ||| | ||||| ||||||||||||||| | || |||||     
T  20883035 gacatcacaggaacaaccacatgttcatcaaaatatggagttaatctggcataaataggttcctttaaaagtttctatccttgcttggcggctgttgagg 20883134  T
Q  115 gatcggttacctac 128  Q
    ||| | ||||||||    
T  20883135 gattgtttacctac 20883148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 34332817 - 34333005
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||| |||||    
T  34332817 gacatcacaggagcagccccagttacatcataatatggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcaacttctgaga 34332916  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34332917 gatcgattacctacaaaaaataatttggcaaaccgtggcattttacctttggaggcgcggttgtgtgtttctggatgtgggaacgttga 34333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 40930530 - 40930715
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||||||||| ||| | || || || ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||     
T  40930530 gacatcacaggagcaacctcagttgcatcaaaacatggagttagtttgacataaacaggttcctctcaaagtatctatccttgcttggcgacttttgagg 40930629  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgt 200  Q
    ||| |||||||||| |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||    
T  40930630 gattggttacctacaaaaaataatttggcaaaccgtggccttttacctttggaggcgcggttgtgtgtttctggttgtgggaacgt 40930715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 2364415 - 2364234
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||     
T  2364415 gacatcacaggagcagccccagttacaccataatatggacttaatttggcataaacaggtccctctcaaagtatctatccttgcttggcgactactgagg 2364316  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| || ||| ||||||||||||    
T  2364315 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgcgttgctggatgtggga 2364234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 7312914 - 7312733
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||||     
T  7312914 gacatcacaggagcagccccagttacaccataatatggacttaatttggcataaacaggtacctctcaaagtatctatccttgcttggcgactaatgagg 7312815  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| |   | |||||| |||| | |||||||||||||||||||    
T  7312814 gatcggttacctacaaaacttaatttggcaaatcgtggcattctgtctgtggaggagcggctttgtgtttctggatgtggga 7312733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 19920231 - 19920413
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||| | |||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||     
T  19920231 gacatcacaggagaagccccagttacaccatcatatggacttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgacttctgagg 19920330  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
    |||||||||||||| |||  |||||||| ||| || |||||| ||  | |||||| |||||| ||||||||||||||||||||    
T  19920331 gatcggttacctacaaaacttaatttggtaaatcgaggcattctatctgtggaggagcggttatgtgtttctggatgtgggaa 19920413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 10323573 - 10323714
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||     
T  10323573 gacatcacaggagcagccccagttacaccatagtatggacttaatttggcataaacaggtccctctcaaagtatctatccttgcttggcgactactgagg 10323672  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcatt 156  Q
    |||||||||||||| |||  |||||||||||  |||||||||    
T  10323673 gatcggttacctacaaaacttaatttggcaactcgtggcatt 10323714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 26771022 - 26771176
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaa 145  Q
    |||||||||||||| |||||||||||||  ||||| ||||| ||||| ||| ||||| | |||||||| ||||| ||||||||||||   ||||||||||    
T  26771022 aatatggagttaatgtggcataaacaggctcctcttaaagtctctattcttacttggcggcttttgagggatcgtttacctacgaaagcaaatttggcaa 26771121  T
Q  146 accgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgt 200  Q
    ||||||| ||  | | |||||||| || |||||||||  |||| |||||| ||||    
T  26771122 accgtggtatcattcctttggaggtgcagttgtgtgtcactggttgtgggcacgt 26771176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 29523747 - 29523860
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || ||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||| |||| |||||     
T  29523747 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatttggcataaacaggttcctttaaaagtttctatccttgcttggcgactgttgagg 29523846  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  29523847 gatcgtttacctac 29523860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 11203957 - 11203844
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || ||||||||||||||||||||||||||||| ||| | ||||| ||||| ||||||||| |||| |||||     
T  11203957 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatttggcataaacaggttcctttaaaagtttctatacttgcttggcgactgttgagg 11203858  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  11203857 gatcgtttacctac 11203844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 7032426 - 7032289
Alignment:
Q  45 taatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggca 144  Q
    |||| |||||||  ||||||| |||||||| ||||||||| | ||||||||||| ||| ||||| |||| |||||||||||||| ||||  ||| ||||     
T  7032426 taatttggagttggtttggcacaaacaggttcctctcaaaatttctatccttgcatggcgacttctgagggatcggttacctacaaaaaacaatctggcg 7032327  T
Q  145 aaccgtggcattttacttttggaggcgcggttgtgtgt 182  Q
    ||  ||||  |||||| |||||| ||||||| ||||||    
T  7032326 aattgtggtcttttacctttggatgcgcggtcgtgtgt 7032289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 12342228 - 12342340
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || |||||||||||||||||||||||||||||  || | ||||| ||||||||||||||| |||| |||||     
T  12342228 gacatcacaggaacaacctcatgttcatcaaaatatggagttaatttggcataaacaggt-tctttaaaagtttctatccttgcttggcgactgttgagg 12342326  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  12342327 gatcgtttacctac 12342340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 33496653 - 33496572
Alignment:
Q  47 atatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||||||||||||||||||| ||| | ||||| |||||| |||||||| |||| ||||| ||||| ||||||||    
T  33496653 atatggagttaatttggcataaacaggttcctttaaaagtttctatcattgcttggcgactgttgagggatcgtttacctac 33496572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 7031055 - 7031146
Alignment:
Q  51 ggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttgg 142  Q
    |||||||||||||||||||||||| ||| | ||| | ||||||||||||||| | || ||||| ||||| |||||||| |||  ||||||||    
T  7031055 ggagttaatttggcataaacaggttcctttaaaactttctatccttgcttggcgtctgttgagggatcgcttacctactaaatctaatttgg 7031146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 16179049 - 16179009
Alignment:
Q  52 gagttaatttggcataaacaggtccctctcaaagtatctat 92  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  16179049 gagttaatttggcataaacaggtacctcttaaagtatctat 16179009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 35214404 - 35214460
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttgg 102  Q
    |||||||||||||| |||||||||||||| ||| | ||||| |||||||||| ||||    
T  35214404 aatatggagttaatctggcataaacaggttcctttaaaagtttctatccttgtttgg 35214460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 15312686 - 15312629
Alignment:
Q  50 tggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagact 107  Q
    ||||||||||||||||||||||||| ||||| ||||| | |||  |||||||| ||||    
T  15312686 tggagttaatttggcataaacaggtacctctaaaagtctatatatttgcttggtgact 15312629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 19890785 - 19890733
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgc 98  Q
    |||||||||||||| |||||||||||||| ||| | ||||| || ||||||||    
T  19890785 aatatggagttaatctggcataaacaggttcctttaaaagtttccatccttgc 19890733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 4e-74; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 1828542 - 1828730
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||    
T  1828542 gacatcacaggagcagccccagttacatcataatatggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggagactattgcga 1828641  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    ||| |||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  1828642 gataggttacctacaaaaactaatttggcaaaccgtggcattttacctttggaggcgcggttgtgtgtttctgggtgtgggaatgttga 1828730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 15740359 - 15740177
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  15740359 gacatcataggagcagccccagttacaccataatatggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggagacttttgcga 15740260  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
    |||||||||||||| |||| ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  15740259 gatcggttacctacaaaaaataatttgacaagccgtggcattttacctttggaggcgcggttgtgtgtttctgggtgtgggaa 15740177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 47685897 - 47686079
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||| ||||| ||| || ||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  47685897 gacatcacaagagcagcccaagttacaccataatctggacttaatttgacataaacaggttcctctcaaagtatctatccttgcttggcgacttttgaga 47685996  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
    |||||||||||||| |||  |||||||||||||||||||||||||  | |||||| |||||| ||||||||||||||||||||    
T  47685997 gatcggttacctacaaaacataatttggcaaaccgtggcattttatctgtggaggagcggttatgtgtttctggatgtgggaa 47686079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 19755405 - 19755214
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||| ||||| |||||  | || ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||    
T  19755405 gacatcacaagagcagccccaatttcatcatcatatggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgactcctgaga 19755306  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcatt---ttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||| |||| ||||||||||||||||| ||||   |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  19755305 gatcggttacctacaaaaaataatttggcaaaccgtgacattttattacctttggaggcgcggttgtgtgtttctggatgtgggagcgttga 19755214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 19784401 - 19784592
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||| ||||| |||||  | || ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||    
T  19784401 gacatcacaagagcagccccaatttcatcatcatatggagttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgactcctgaga 19784500  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcatt---ttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||| |||| ||||||||||||||||| ||||   |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  19784501 gatcggttacctacaaaaaataatttggcaaaccgtgacattttattacctttggaggcgcggttgtgtgtttctggatgtgggagcgttga 19784592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 7404051 - 7403863
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||| || |||||| ||||||||||||||||||| || | | ||||||| ||||||||||||||| ||||| ||||     
T  7404051 gacatcacaggagcagccccagttacatcaaaatatgaagttaatttggcataaacaagttcatttcaaagtctctatccttgcttggcgacttctgagg 7403952  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  7403951 gatcggttacctacaaaaaagaatttggcaaaccgtggcattttacgtttggaggcgcggttgtgtgtctctggatgcgggaacgttga 7403863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 13270893 - 13271074
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||     
T  13270893 gacatcacaggagcagccccagttacaccataatgtggacttaatttggcataaacaggtccctctcaaagtctctatccttgcttggcgactaatgagg 13270992  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| || ||| ||||||||||||    
T  13270993 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgagttactggatgtggga 13271074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 23642593 - 23642774
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||     
T  23642593 gacatcacaggagcagccccagttacaccataatgtggacttaatttggcataaacaggtccctctcaaagtctctatccttgcttggcgactaatgagg 23642692  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| || ||| ||||||||||||    
T  23642693 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgcgttgctggatgtggga 23642774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 47418942 - 47418801
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||     
T  47418942 gacatcacaggagcagccccagttacaccatagtatggacttaatttggcataaacaggtccctctcaaagtatctatccttgcttggcgactactgagg 47418843  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcatt 156  Q
    |||||||||||||| |||  |||||||||||  |||||||||    
T  47418842 gatcggttacctacaaaacttaatttggcaactcgtggcatt 47418801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 45472742 - 45472824
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    ||||||||||||||||||||||||||||| ||| | ||||| |||||||||| |||| |||| ||||| ||||| ||||||||    
T  45472742 aatatggagttaatttggcataaacaggttcctttaaaagtttctatccttgtttggcgactgttgagggatcgtttacctac 45472824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 11587233 - 11587334
Alignment:
Q  48 tatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaaac 147  Q
    |||||||||||||||||||||| || | ||| ||||||||||||| ||||||||| | ||| ||||  |||| ||||||||||||   ||||||||||||    
T  11587233 tatggagttaatttggcataaatagatacctatcaaagtatctattcttgcttggcggcttctgaggaatcgtttacctacgaaagaaaatttggcaaac 11587332  T
Q  148 cg 149  Q
    ||    
T  11587333 cg 11587334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 12697951 - 12697838
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| ||  | || || |||||| | |||||||||||||||||||| ||| | ||||| ||||||||||||||| |||| |||||     
T  12697951 gacatcacaggaacaacctcatgttcatcaaaatatgaaattaatttggcataaacaggttcctttaaaagtttctatccttgcttggcgactgttgagg 12697852  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  12697851 gatcgtttacctac 12697838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 20002832 - 20002722
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaa 145  Q
    ||||||||||||||||||||||||||||| | | | ||||| |||||| |||||||| | || ||||| ||||| |||||||| |||   || ||||||     
T  20002832 aatatggagttaatttggcataaacaggttcttttaaaagtttctatcattgcttggcggctgttgagggatcgtttacctactaaatccaacttggcag 20002733  T
Q  146 accgtggcatt 156  Q
    |||||||||||    
T  20002732 accgtggcatt 20002722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 55725719 - 55725801
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||||||||||||||||| || ||||| ||||| || |||||||||||| | || ||||| ||||| ||||||||    
T  55725719 aatatggagttaatttggcataaacaagttcctctaaaagtttcaatccttgcttggcggctattgagggatcgcttacctac 55725801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 8361236 - 8361146
Alignment:
Q  17 catcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagact 107  Q
    |||||||||| ||||| ||  | || || ||||||||||||||||||||||||||||| ||  | ||||| |||||||||| |||| ||||    
T  8361236 catcacaggaacaacctcatgttcatcaaaatatggagttaatttggcataaacaggttcccttaaaagtttctatccttgtttggcgact 8361146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 2822039 - 2822152
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||| |||| ||||| || || || || |||||||||||||| ||||| |||||||| ||||| ||||| ||  ||| ||||||| || | |||||     
T  2822039 gacatcataggaacaacctcatattcatcaaaatatggagttaatctggcacaaacaggtacctctaaaagtttcagtccatgcttggcgattgttgagg 2822138  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  2822139 gatcgcttacctac 2822152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 5790131 - 5790171
Alignment:
Q  52 gagttaatttggcataaacaggtccctctcaaagtatctat 92  Q
    |||||||||||||||||||| || ||||| |||||||||||    
T  5790131 gagttaatttggcataaacaagtacctcttaaagtatctat 5790171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 51052618 - 51052437
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||     
T  51052618 gacatcacaggagcagccccagttacaccataatatggacttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgacttctgagg 51052519  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| |||||||||||||||||||    
T  51052518 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgtgtttctggatgtggga 51052437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 11909107 - 11909288
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||     
T  11909107 gacatcacaggagcagccccagttacaccataatatggacttaatttggcataaacaggttcctctcaaagtatctatcattgcttggcgacttctgagg 11909206  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||| | |||||||||||||||||||    
T  11909207 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggctatgtgtttctggatgtggga 11909288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 6050741 - 6050560
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||     
T  6050741 gacatcacaggagcagccccagttacaccataatgtggacttaatttggcataaacaggtccctctcaaagtctctatccttgcttggcgactaatgagg 6050642  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  ||||||||||||  |||||||| ||  | |||||| |||||| || ||| ||||||||||||    
T  6050641 gatcggttacctacaaaacttaatttggcaaattgtggcattctatctgtggaggagcggttctgcgttgctggatgtggga 6050560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 35541187 - 35541046
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||     
T  35541187 gacatcacaggagcagccccagttacaccataatatggacttaatttggcataaacaggtccctctcaaagtatctatccttgcttggcgactactgagg 35541088  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcatt 156  Q
    ||||||||||| || |||  |||||||||||| |||||||||    
T  35541087 gatcggttacccacaaaacataatttggcaaatcgtggcatt 35541046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 47623079 - 47623244
Alignment:
Q  15 gacatcacaggagcaaccccagatacac-cataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgag 113  Q
    |||||||||||| ||||| ||| ||||  |||| |||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||||    
T  47623079 gacatcacaggaacaacctcagttacattcata-tatggaattaatttggcataaacaggtacctctcaaagtatctattcttgcttggcggcttttgag 47623177  T
Q  114 agatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgt 180  Q
     || || |||||||||||  | |||||||||||||||| |||| | | | |||||| ||||||||||    
T  47623178 ggaccgcttacctacgaagggaaatttggcaaaccgtgacattattcctatggaggggcggttgtgt 47623244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 16917842 - 16917938
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttgg 142  Q
    ||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||| |||| ||||| ||||| |||||||| |||  ||||||||    
T  16917842 aatatggagttaatttggcataaacaggttcctttaaaagtttctatccttgcttggcgactgttgagggatcgcttacctactaaatctaatttgg 16917938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 43388474 - 43388392
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    ||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||| || | ||||| ||||| ||||||||    
T  43388474 aatatggagttaatttggcataaacaggttcctttaaaagtttctatccttgcttggcgattgttgagggatcgtttacctac 43388392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 37191243 - 37191325
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||||| |||||||||| ||| | | | ||||| | ||||||||||||| | || ||||||||||| ||||||||    
T  37191243 aatatggagttaatctggcataaactggttcatttaaaagtttatatccttgcttggcggctgttgagagatcgattacctac 37191325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 28351821 - 28351776
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatcta 91  Q
    ||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  28351821 aatatggagttaatttggcataaaccggtccctctgaaagtctcta 28351776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 22191823 - 22191875
Alignment:
Q  55 ttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagact 107  Q
    |||||||||||||||||||| ||| | || || ||||| ||||||||||||||    
T  22191823 ttaatttggcataaacaggttcctttgaaggtttctattcttgcttggagact 22191875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 11207 - 11389
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||||||  ||||| ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| | ||     
T  11207 gacatcacaggagcagacccagctacaccataatctggacttaatttggcataaacaggttcctctcaaagtatctatccttgcttggcgacttctcagg 11306  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaa 197  Q
    |||||||||||||| |||  |||||||||||||||||||||| ||  | |||||| |||||| ||||||||||||||||||||    
T  11307 gatcggttacctacaaaacttaatttggcaaaccgtggcattctatctgtggaggagcggttatgtgtttctggatgtgggaa 11389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 3e-53; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 4552307 - 4552126
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||| ||||     
T  4552307 gacatcacaggagcagccccagttacaccataatatggacttaatttggcataaataggttcctcttaaagtatctatccttgcttggcgacttctgagg 4552208  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| |||||||||||||||||||    
T  4552207 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgtgtttctggatgtggga 4552126  T

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Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 41207123 - 41206966
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaa 145  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||| |||| |||||||||||||| |||| |||||||||||    
T  41207123 aatatggagttaatttggcataaacaggttcctctcaaagtctctatccttgcttggcggcttctgagggatcggttacctacaaaaaataatttggcaa 41207024  T
Q  146 accgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgggaacgttga 203  Q
    | ||||||||| | |  ||||||||||||||||||||  ||||||| ||| |||||||    
T  41207023 atcgtggcattattcccttggaggcgcggttgtgtgtcactggatgcgggcacgttga 41206966  T

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Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 48 - 194
Target Start/End: Complemental strand, 28252825 - 28252679
Alignment:
Q  48 tatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaaac 147  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||| | |||||||| ||||| |||||||||||  | ||||||||||||    
T  28252825 tatggaattaatttggcataaacaggtacctctaaaagtatctattcttgcttggcggcttttgagggatcgcttacctacgaagggaaatttggcaaac 28252726  T
Q  148 cgtggcattttacttttggaggcgcggttgtgtgtttctggatgtgg 194  Q
    | ||||||| | | | |||||| |||||| |||||||| || |||||    
T  28252725 catggcattattcatatggaggggcggttatgtgtttccggttgtgg 28252679  T

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Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 182
Target Start/End: Original strand, 17764995 - 17765131
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaa 145  Q
    |||||||||||||| |||||||||||||  ||||| ||||| ||||| ||||||||| | || ||||| ||||  ||||||||||||   ||||||||||    
T  17764995 aatatggagttaatatggcataaacaggctcctcttaaagtctctattcttgcttggcggctattgagggatcatttacctacgaaagcaaatttggcaa 17765094  T
Q  146 accgtggcattttacttttggaggcgcggttgtgtgt 182  Q
    ||||||| ||  | | |||||||||||||||||||||    
T  17765095 accgtggtatcattcctttggaggcgcggttgtgtgt 17765131  T

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Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 195
Target Start/End: Complemental strand, 15917761 - 15917612
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctacgaaaagtaatttggcaa 145  Q
    ||||| |||||||||| ||||||| |||| ||||| ||||| | ||||||||||||| ||||  |||| ||||| |||||||| |||  |||||||||||    
T  15917761 aatattgagttaatttcgcataaataggttcctctgaaagtctgtatccttgcttggggactgctgagggatcgtttacctacaaaagttaatttggcaa 15917662  T
Q  146 accgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggg 195  Q
    | ||||| ||| | | |||||| | ||||||||||||  |||| ||||||    
T  15917661 atcgtggtattattcctttggaagtgcggttgtgtgtcactggttgtggg 15917612  T

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Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 12645643 - 12645561
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||||||||||||||||||||  |||| ||||| || |||||||||||| | || ||||| ||||| ||||||||    
T  12645643 aatatggagttaatttggcataaacaggtttctctaaaagtttcaatccttgcttggcggctattgagggatcgcttacctac 12645561  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 40176806 - 40176693
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    |||||||||||| ||||| || || || || |||||||||||| | ||||| |||||||| ||||| ||||| ||  ||||||||||| |  | |||||     
T  40176806 gacatcacaggaacaacctcatattcatcaaaatatggagttagtctggcacaaacaggtacctctaaaagtttcagtccttgcttggcggttgttgagg 40176707  T
Q  115 gatcggttacctac 128  Q
    ||||| ||||||||    
T  40176706 gatcgtttacctac 40176693  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 14439857 - 14439777
Alignment:
Q  48 tatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||| |||||||||||||| ||| | ||||| |||||| | |||||  |||| ||||| ||||| ||||||||    
T  14439857 tatggagttaatctggcataaacaggttcctttaaaagtttctatcttggcttgacgactgttgagggatcgtttacctac 14439777  T

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Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 38604407 - 38604489
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgagagatcggttacctac 128  Q
    |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||   || || |||||||| ||||||||    
T  38604407 aatatggagttaatctggcataaacaagtacctctaaaagtttcaatccttgcatggctgctgttaagagatcgtttacctac 38604489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 10999984 - 11000040
Alignment:
Q  46 aatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttgg 102  Q
    |||||||||||||| || |||||||||||  || | ||||| |||||||||||||||    
T  10999984 aatatggagttaatctgccataaacaggtttctttaaaagtttctatccttgcttgg 11000040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 105845 - 106026
Alignment:
Q  15 gacatcacaggagcaaccccagatacaccataatatggagttaatttggcataaacaggtccctctcaaagtatctatccttgcttggagacttttgaga 114  Q
    ||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||     
T  105845 gacatcacaggagcagccccagttacaccataatgtggacttaatttggcataaacaggtccctctcaaagtctctatccttgcttggcgactaatgagg 105944  T
Q  115 gatcggttacctacgaaaagtaatttggcaaaccgtggcattttacttttggaggcgcggttgtgtgtttctggatgtggga 196  Q
    |||||||||||||| |||  |||||||||||| ||||||||| ||  | |||||| |||||| || ||| ||||||||||||    
T  105945 gatcggttacctacaaaacttaatttggcaaatcgtggcattctatctgtggaggagcggttatgcgttgctggatgtggga 106026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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