View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1155_high_13 (Length: 307)
Name: NF1155_high_13
Description: NF1155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1155_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 42984663 - 42984911
Alignment:
| Q |
1 |
ttagtgagtaaatggtatattatgcacatgtagtcaaaaccattttcccttcttagaagataaatggattctttcgtgacatagttggtgacttatacgt |
100 |
Q |
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| T |
42984663 |
ttagtgagtaaatggtatattatgcacatgtagtcaaaaccattttcccttcttagaagataaatggattctttcgtgacatagttggtgacttatacgt |
42984762 |
T |
|
| Q |
101 |
gtatgtttgtatctgtaaaataacagaatcacccaataaaaaagcaactaaattatattccattctccttttttgccacatataactcatgttctgtcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42984763 |
gtatgtttgtatctgtaaaataacagaatcacccaataaaaaagcaactaaattatattccattctccttttttgccacatataactcatgttctgtcat |
42984862 |
T |
|
| Q |
201 |
ccaataagcaagccaggaataaccaaatgctatagtattatgttgattt |
249 |
Q |
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| T |
42984863 |
ccaataagcaagccaggaataaccaaatgctatagtattatgttgattt |
42984911 |
T |
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