View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1155_low_24 (Length: 305)
Name: NF1155_low_24
Description: NF1155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1155_low_24 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 79 - 251
Target Start/End: Original strand, 7102620 - 7102792
Alignment:
| Q |
79 |
tgtgactgtattttccggtgagttagcttcattttgtgaaaatctctcaccactgagttcatcttccttgattcataatctctatcttgttgttgatttc |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7102620 |
tgtgactgtattttccggtgagttagcttcattttgtgaaaatctctcaccactgagttcatcttccttgattcataatctctatcttgttgttgatttc |
7102719 |
T |
|
| Q |
179 |
agcgacaaaatgggtatcattgaaaagatcaaagaaatcgaagccgagatggctcgaactcagaaaaacaaag |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7102720 |
agcgacaaaatgggtatcattgaaaagatcaaagaaatcgaagccgagatggctcggactcagaaaaacaaag |
7102792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University