View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11561_high_19 (Length: 242)
Name: NF11561_high_19
Description: NF11561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11561_high_19 |
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Alignment Details
Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 41096836 - 41097030
Alignment:
| Q |
12 |
tgcaataccaatttgtcatccactaattgtaaatctcaggccaccacttatttgacatttaactctgcacagcattcacaacaacaacatccttagtagc |
111 |
Q |
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| T |
41096836 |
tgcaataccaatttgtcatccactaattgtaaatctcaggccaccacttatttgacatttaactctgcacagcatt-----------------tagtagc |
41096918 |
T |
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| Q |
112 |
tttgggaccaggtatcggagtatacttccagataaaccaagagtttttaagcctgaatgtgtactttcagagtcatgtgtgatttttaaaaatgtgaggt |
211 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41096919 |
tttgagaccaggtatcggagtatacttccagataaaccaagagtttttaagcctgaatgtgtactttcagagtcatgtgtgatttttaaaaatgtgaggt |
41097018 |
T |
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