View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11561_low_19 (Length: 272)

Name: NF11561_low_19
Description: NF11561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11561_low_19
NF11561_low_19
[»] chr8 (36 HSPs)
chr8 (137-265)||(33304111-33304239)
chr8 (56-142)||(34641654-34641740)
chr8 (56-129)||(1422599-1422672)
chr8 (57-137)||(23709078-23709158)
chr8 (56-129)||(41776276-41776349)
chr8 (57-137)||(25430748-25430828)
chr8 (57-129)||(42651022-42651094)
chr8 (67-129)||(13924121-13924183)
chr8 (56-129)||(22203112-22203185)
chr8 (56-129)||(37471744-37471817)
chr8 (57-129)||(34247876-34247948)
chr8 (86-137)||(28713224-28713275)
chr8 (86-137)||(28720571-28720622)
chr8 (86-137)||(28728213-28728264)
chr8 (59-137)||(28156307-28156385)
chr8 (56-129)||(8233393-8233466)
chr8 (64-129)||(21649067-21649132)
chr8 (56-129)||(22836036-22836109)
chr8 (57-134)||(34838162-34838239)
chr8 (89-137)||(4148544-4148592)
chr8 (64-108)||(10344437-10344481)
chr8 (57-137)||(21273600-21273679)
chr8 (57-108)||(9305915-9305966)
chr8 (86-129)||(18550110-18550153)
chr8 (57-108)||(32234370-32234421)
chr8 (67-137)||(30608600-30608669)
chr8 (76-138)||(34883285-34883347)
chr8 (57-127)||(35701742-35701812)
chr8 (56-125)||(14233545-14233614)
chr8 (57-134)||(27300448-27300525)
chr8 (57-137)||(295648-295727)
chr8 (56-108)||(2597078-2597130)
chr8 (56-108)||(22767231-22767283)
chr8 (57-97)||(24616447-24616487)
chr8 (56-108)||(30927849-30927901)
chr8 (57-137)||(45405724-45405804)
[»] chr3 (37 HSPs)
chr3 (56-137)||(2935400-2935481)
chr3 (56-137)||(49361726-49361807)
chr3 (56-137)||(48205146-48205227)
chr3 (56-137)||(48490402-48490483)
chr3 (56-129)||(51385337-51385410)
chr3 (56-129)||(48117437-48117510)
chr3 (57-137)||(14838934-14839014)
chr3 (86-137)||(29555730-29555781)
chr3 (56-126)||(9158936-9159006)
chr3 (56-129)||(9027714-9027787)
chr3 (56-129)||(33971984-33972057)
chr3 (56-129)||(43149240-43149313)
chr3 (57-137)||(16295566-16295646)
chr3 (57-137)||(44689905-44689985)
chr3 (159-239)||(45818034-45818113)
chr3 (56-137)||(29706004-29706084)
chr3 (56-129)||(29846788-29846861)
chr3 (64-137)||(43220031-43220104)
chr3 (86-129)||(40821757-40821800)
chr3 (137-207)||(20525556-20525626)
chr3 (67-129)||(29057760-29057822)
chr3 (57-115)||(29533863-29533921)
chr3 (56-137)||(7231896-7231976)
chr3 (56-109)||(11173551-11173604)
chr3 (56-137)||(20380779-20380859)
chr3 (56-137)||(28269907-28269987)
chr3 (59-136)||(33074977-33075054)
chr3 (56-129)||(44827054-44827127)
chr3 (56-129)||(50745650-50745723)
chr3 (56-108)||(13159762-13159814)
chr3 (56-108)||(32931836-32931888)
chr3 (57-129)||(35368713-35368785)
chr3 (56-108)||(36819057-36819109)
chr3 (56-108)||(37215149-37215201)
chr3 (57-137)||(37303485-37303564)
chr3 (57-129)||(43894882-43894954)
chr3 (56-108)||(54233419-54233471)
[»] chr1 (29 HSPs)
chr1 (57-137)||(1100319-1100399)
chr1 (61-137)||(835977-836053)
chr1 (61-137)||(50796108-50796183)
chr1 (56-129)||(37947117-37947190)
chr1 (56-129)||(40240008-40240081)
chr1 (56-129)||(8577399-8577472)
chr1 (56-129)||(31244632-31244705)
chr1 (86-142)||(12990369-12990425)
chr1 (57-137)||(27954330-27954410)
chr1 (57-137)||(41564769-41564849)
chr1 (56-138)||(26760663-26760745)
chr1 (64-129)||(11897283-11897348)
chr1 (64-129)||(30596823-30596888)
chr1 (56-137)||(39010915-39010995)
chr1 (64-137)||(40053015-40053088)
chr1 (64-136)||(21263132-21263204)
chr1 (57-137)||(23399878-23399958)
chr1 (56-108)||(29489277-29489329)
chr1 (57-137)||(46903572-46903652)
chr1 (57-129)||(48962088-48962160)
chr1 (67-129)||(11121592-11121654)
chr1 (56-129)||(32966368-32966441)
chr1 (56-108)||(13813659-13813711)
chr1 (56-108)||(16836032-16836084)
chr1 (56-108)||(25130804-25130856)
chr1 (56-136)||(28457237-28457317)
chr1 (89-129)||(29094645-29094685)
chr1 (93-137)||(29638853-29638897)
chr1 (57-137)||(43757688-43757768)
[»] chr7 (30 HSPs)
chr7 (56-134)||(25272692-25272770)
chr7 (56-137)||(49142406-49142487)
chr7 (56-134)||(33464930-33465007)
chr7 (56-132)||(40108225-40108300)
chr7 (64-137)||(45335972-45336045)
chr7 (57-137)||(12141986-12142065)
chr7 (57-137)||(23034202-23034282)
chr7 (56-137)||(22331100-22331181)
chr7 (56-129)||(38197762-38197835)
chr7 (57-134)||(44185278-44185355)
chr7 (57-137)||(24380610-24380690)
chr7 (86-137)||(29923802-29923852)
chr7 (86-137)||(47945114-47945165)
chr7 (86-137)||(47950544-47950595)
chr7 (86-137)||(48639274-48639325)
chr7 (137-239)||(28109211-28109313)
chr7 (56-129)||(37848517-37848590)
chr7 (57-137)||(1709386-1709466)
chr7 (57-129)||(7295569-7295641)
chr7 (57-129)||(32315928-32316000)
chr7 (57-137)||(37970035-37970115)
chr7 (57-137)||(41538582-41538662)
chr7 (57-137)||(41910074-41910154)
chr7 (56-137)||(2790278-2790359)
chr7 (164-234)||(42078110-42078180)
chr7 (56-137)||(2600423-2600504)
chr7 (57-134)||(27704537-27704614)
chr7 (56-137)||(48866820-48866900)
chr7 (56-108)||(116732-116784)
chr7 (56-108)||(42431824-42431876)
[»] chr5 (40 HSPs)
chr5 (56-137)||(4173013-4173094)
chr5 (56-137)||(9957090-9957171)
chr5 (56-129)||(40201018-40201090)
chr5 (56-129)||(17574121-17574194)
chr5 (56-137)||(20985419-20985499)
chr5 (56-138)||(12612905-12612987)
chr5 (64-138)||(38919955-38920029)
chr5 (57-129)||(18729174-18729246)
chr5 (67-129)||(12203257-12203319)
chr5 (64-137)||(21771362-21771435)
chr5 (56-129)||(33893687-33893760)
chr5 (57-137)||(35616690-35616770)
chr5 (57-137)||(37821030-37821110)
chr5 (164-234)||(26449046-26449116)
chr5 (56-129)||(35595883-35595956)
chr5 (56-129)||(43152957-43153030)
chr5 (164-231)||(9198004-9198069)
chr5 (56-108)||(11464041-11464093)
chr5 (56-132)||(14522858-14522934)
chr5 (56-108)||(28811529-28811581)
chr5 (57-137)||(39032493-39032573)
chr5 (57-129)||(42364531-42364603)
chr5 (64-114)||(2863658-2863708)
chr5 (57-115)||(5005215-5005273)
chr5 (56-137)||(2117530-2117610)
chr5 (56-137)||(3518284-3518365)
chr5 (56-129)||(6458868-6458941)
chr5 (88-137)||(14126547-14126596)
chr5 (56-137)||(27392592-27392672)
chr5 (56-137)||(39458742-39458822)
chr5 (56-109)||(39595375-39595428)
chr5 (57-137)||(125194-125273)
chr5 (69-137)||(3849612-3849680)
chr5 (56-108)||(8959261-8959313)
chr5 (57-129)||(9940156-9940228)
chr5 (57-137)||(11306798-11306877)
chr5 (56-108)||(15622145-15622197)
chr5 (57-129)||(19437359-19437430)
chr5 (56-108)||(28501718-28501770)
chr5 (56-108)||(33823612-33823664)
[»] chr2 (61 HSPs)
chr2 (56-137)||(3366132-3366213)
chr2 (56-137)||(37076754-37076835)
chr2 (56-137)||(9384476-9384557)
chr2 (56-137)||(12208543-12208624)
chr2 (58-137)||(28264631-28264710)
chr2 (64-137)||(23141463-23141536)
chr2 (64-137)||(23553253-23553326)
chr2 (64-137)||(30340103-30340176)
chr2 (57-137)||(1277833-1277913)
chr2 (71-139)||(3681479-3681547)
chr2 (56-129)||(27538829-27538902)
chr2 (81-134)||(33569694-33569747)
chr2 (64-129)||(35007998-35008063)
chr2 (56-137)||(43205194-43205275)
chr2 (150-234)||(29463198-29463282)
chr2 (56-129)||(8757645-8757718)
chr2 (56-129)||(11828717-11828790)
chr2 (56-137)||(13711162-13711242)
chr2 (56-129)||(27529628-27529701)
chr2 (56-129)||(35705814-35705887)
chr2 (56-129)||(45202029-45202102)
chr2 (57-137)||(12257003-12257083)
chr2 (57-137)||(38598239-38598318)
chr2 (86-137)||(5852589-5852640)
chr2 (86-137)||(26387720-26387771)
chr2 (86-129)||(28679258-28679301)
chr2 (58-137)||(38533087-38533166)
chr2 (56-137)||(3091842-3091922)
chr2 (56-129)||(6885377-6885450)
chr2 (56-129)||(35203646-35203719)
chr2 (56-137)||(35798310-35798391)
chr2 (56-137)||(36133075-36133155)
chr2 (64-129)||(37064167-37064232)
chr2 (56-129)||(40115616-40115689)
chr2 (64-129)||(44897735-44897800)
chr2 (57-137)||(1151631-1151711)
chr2 (56-128)||(13881196-13881268)
chr2 (56-128)||(14021321-14021393)
chr2 (57-129)||(16463394-16463466)
chr2 (56-128)||(17999845-17999917)
chr2 (57-137)||(34141545-34141625)
chr2 (57-129)||(35518377-35518449)
chr2 (57-137)||(38027504-38027584)
chr2 (56-135)||(12600149-12600227)
chr2 (61-115)||(4114343-4114397)
chr2 (143-221)||(6452961-6453039)
chr2 (59-137)||(43076401-43076478)
chr2 (67-129)||(43515003-43515065)
chr2 (56-129)||(11164274-11164346)
chr2 (56-137)||(13104580-13104660)
chr2 (64-129)||(22296026-22296091)
chr2 (167-224)||(31514392-31514449)
chr2 (56-137)||(32750099-32750179)
chr2 (56-137)||(38724206-38724287)
chr2 (57-129)||(43791688-43791760)
chr2 (56-108)||(12358414-12358466)
chr2 (57-129)||(18949108-18949179)
chr2 (56-108)||(23048001-23048053)
chr2 (56-108)||(29795537-29795589)
chr2 (56-108)||(36383563-36383615)
chr2 (56-108)||(37966457-37966509)
[»] chr4 (46 HSPs)
chr4 (142-239)||(14518531-14518628)
chr4 (61-135)||(37775318-37775392)
chr4 (57-137)||(46355180-46355260)
chr4 (57-137)||(50291384-50291464)
chr4 (61-135)||(54801378-54801452)
chr4 (56-129)||(4878068-4878141)
chr4 (56-129)||(45678364-45678437)
chr4 (56-129)||(29577333-29577406)
chr4 (56-129)||(33776995-33777068)
chr4 (56-109)||(53781754-53781807)
chr4 (57-137)||(8614284-8614364)
chr4 (89-137)||(18944419-18944467)
chr4 (57-108)||(3475970-3476021)
chr4 (57-108)||(41170874-41170925)
chr4 (56-137)||(4896390-4896470)
chr4 (56-129)||(22893969-22894042)
chr4 (56-129)||(22945637-22945710)
chr4 (64-129)||(31413683-31413748)
chr4 (64-137)||(43759070-43759142)
chr4 (56-137)||(47998695-47998774)
chr4 (86-134)||(21766678-21766726)
chr4 (57-137)||(32574379-32574459)
chr4 (57-137)||(42915109-42915188)
chr4 (57-136)||(1727979-1728058)
chr4 (86-129)||(1868790-1868833)
chr4 (56-115)||(1987624-1987683)
chr4 (86-137)||(32294641-32294692)
chr4 (86-137)||(36110265-36110316)
chr4 (67-129)||(4577676-4577737)
chr4 (57-115)||(4949145-4949203)
chr4 (56-110)||(28676070-28676124)
chr4 (56-137)||(5234361-5234441)
chr4 (64-129)||(8487744-8487809)
chr4 (56-109)||(9032881-9032934)
chr4 (56-129)||(9096038-9096110)
chr4 (56-137)||(31275247-31275327)
chr4 (56-129)||(43982998-43983071)
chr4 (57-134)||(46791883-46791960)
chr4 (64-129)||(53763708-53763773)
chr4 (56-108)||(5208245-5208297)
chr4 (86-134)||(19807310-19807358)
chr4 (56-108)||(27001327-27001379)
chr4 (89-137)||(39699356-39699404)
chr4 (57-137)||(46309012-46309092)
chr4 (56-108)||(47106012-47106064)
chr4 (56-108)||(51377211-51377263)
[»] scaffold0119 (1 HSPs)
scaffold0119 (57-137)||(23178-23258)
[»] chr6 (17 HSPs)
chr6 (56-129)||(608558-608631)
chr6 (57-134)||(7303997-7304074)
chr6 (56-129)||(19713095-19713168)
chr6 (57-137)||(34792108-34792188)
chr6 (56-137)||(1897787-1897867)
chr6 (56-109)||(2165217-2165270)
chr6 (56-109)||(2176850-2176903)
chr6 (64-129)||(6997447-6997512)
chr6 (56-129)||(9395234-9395307)
chr6 (56-129)||(10557510-10557583)
chr6 (56-108)||(3660271-3660323)
chr6 (89-137)||(17442956-17443004)
chr6 (57-129)||(32135334-32135406)
chr6 (164-233)||(16599323-16599392)
chr6 (56-129)||(22422251-22422324)
chr6 (56-108)||(1803970-1804022)
chr6 (56-108)||(2582763-2582815)
[»] scaffold0014 (1 HSPs)
scaffold0014 (57-137)||(145149-145229)
[»] scaffold0514 (1 HSPs)
scaffold0514 (84-137)||(1736-1789)
[»] scaffold0286 (1 HSPs)
scaffold0286 (56-109)||(17139-17192)
[»] scaffold0058 (1 HSPs)
scaffold0058 (56-129)||(3044-3117)
[»] scaffold0592 (1 HSPs)
scaffold0592 (58-122)||(1013-1077)
[»] scaffold0076 (1 HSPs)
scaffold0076 (56-108)||(11293-11345)
[»] scaffold0115 (1 HSPs)
scaffold0115 (56-137)||(15079-15158)
[»] scaffold0036 (1 HSPs)
scaffold0036 (56-137)||(18105-18184)
[»] scaffold0002 (1 HSPs)
scaffold0002 (56-108)||(147174-147226)


Alignment Details
Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 33304111 - 33304239
Alignment:
Q  137 ttattatattatgtgtttgatgtacagatgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttattaacatgataaca 236  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  33304111 ttattatattatgtgtttgatgtacacatgataagaaagatgataatattgttttatcttattatatatttgatgcacacttgttattaacatgataaca 33304210  T
Q  237 aatttacaatgtcgtaatatattcatctc 265  Q
    |||| ||||||  | || |||||||||||    
T  33304211 aattaacaatgctgcaacatattcatctc 33304239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 34641654 - 34641740
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactacttatta 142  Q
    ||||||||||||||||||  |||||||||||||||| |||||| |||| ||||||||||| ||||||| ||||||||||||| ||||    
T  34641654 cattgttattgaccaatgggaagaaagaataacaagattgtcataaaaattgtactaaaaaagttgtttaaataacactactcatta 34641740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 1422672 - 1422599
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||| | ||||||||||||||||| |||||||||||  |||| |||||||||||||    
T  1422672 cattgtttttgaccaatgaaaaaatagaataacaaggttgtcccaaaagttgtatcaaaatagttgttcaaata 1422599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 23709078 - 23709158
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| |||||||||||||||| || |||||||||||||| ||||| |||||  |||| |||||||||||||||| ||||    
T  23709078 attgttcttgaccaatgaaaagagagcataacaaggttgtcccaaaaattgtagcaaaaaagttgttcaaataacattact 23709158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 41776276 - 41776349
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||||||||| |||||||||||  |||| |||||||||||||    
T  41776276 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaata 41776349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 25430748 - 25430828
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  25430748 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactact 25430828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 42651022 - 42651094
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| || |||||||| |||| |||| |||||||||||| |||||||||||| |||| |||||||||||||    
T  42651022 attgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaagttgtaccaaaatagttgttcaaata 42651094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 13924121 - 13924183
Alignment:
Q  67 accaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||| |||| || | |||||| |||||||||||||||||| ||||||||||||||||||    
T  13924121 accaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaagagttgttcaaata 13924183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 22203185 - 22203112
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| |||||| || | |||||||||||| |||||||||||  |||| |||||||||||||    
T  22203185 cattgtttttgaccaatcaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaata 22203112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 37471744 - 37471817
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||| ||||| |||||||||||  |||| |||||||||||||    
T  37471744 cattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaata 37471817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 34247876 - 34247948
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| |||||||||||||||| |||| |||||||||||| ||||||||||   ||||| ||||| ||||||    
T  34247876 attgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaagttgtctcaaaagggttgtacaaata 34247948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 28713224 - 28713275
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| ||||| |||||| |||||||||||||||||| |||||||    
T  28713224 aacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactact 28713275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 28720571 - 28720622
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| ||||| |||||| |||||||||||||||||| |||||||    
T  28720571 aacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactact 28720622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 28728213 - 28728264
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| ||||| |||||| |||||||||||||||||| |||||||    
T  28728213 aacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactact 28728264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 28156307 - 28156385
Alignment:
Q  59 tgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||| ||||||||||| |||| |||| ||||| |||||| |||| |||||||||||| ||||||  ||||| |||||||    
T  28156307 tgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatcactact 28156385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 8233466 - 8233393
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||| |||| |||| ||||||||| ||  ||||||||||| |||| || ||||||||||    
T  8233466 cattgtttttgaccaatgagaagagagaacaacaaggttatccaaaaagttgtacaaaaatagatgttcaaata 8233393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 21649132 - 21649067
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||| |||||| || | |||||||||||| |||||||||||  |||| |||||||||||||    
T  21649132 ttgaccaataaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaata 21649067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 22836109 - 22836036
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | ||||||||| || ||||| |||||  |||| |||||||||||||    
T  22836109 cattgtttttgaccaatgaaaagagagcacaacaaggttatcccaaaaattgtagcaaaaaagttgttcaaata 22836036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 34838239 - 34838162
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||| ||||||||| | |||| |  | ||||||||||||  ||||||||||| |||||||||||||||||| ||||    
T  34838239 attgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatcact 34838162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 4148592 - 4148544
Alignment:
Q  89 aaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||| |||||||||||| |||||||| ||||||||| |||||||    
T  4148592 aaggttgtcccaaaagttgtaccaaaagagtcgttcaaatatcactact 4148544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 10344437 - 10344481
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||    
T  10344437 ttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgt 10344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 21273679 - 21273600
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| || ||||||||||||| |||| |  || |||||||||||||||||| | ||| ||||||||||||| |||||||    
T  21273679 attgtttttaaccaatgaaaagagagaaaagaaaagttgtcacaaaagttgta-tgaaatagttgttcaaatatcactact 21273600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 9305966 - 9305915
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    |||||| |||| ||||||||||| |||||| |||||||||| ||||||||||    
T  9305966 attgtttttgatcaatgaaaagagagaatatcaaggttgtctcaaaagttgt 9305915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 18550110 - 18550153
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||||||| |||||||||||| |||| |||||||||||||    
T  18550110 aacaaggttgtcccaaaagttgtaccaaaatagttgttcaaata 18550153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 32234421 - 32234370
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    |||||||||||||||||| |||| ||||||| |||||||||  |||||||||    
T  32234421 attgttattgaccaatgagaagagagaataaaaaggttgtcctaaaagttgt 32234370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 30608669 - 30608600
Alignment:
Q  67 accaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| |||||| |||| ||||| ||||||| ||| ||||||| ||||||||||| |||||| |||||||    
T  30608669 accaatcaaaagatagaaaaacaaagttgtcataaaggttgtac-aaaagagttgtacaaatatcactact 30608600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 34883285 - 34883347
Alignment:
Q  76 aagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactactt 138  Q
    |||| |||| |||||||||||  ||||||||||||||||| ||||||| ||||| || |||||    
T  34883285 aagagagaacaacaaggttgtatcaaaagttgtactaaaatagttgtttaaatatcattactt 34883347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 35701812 - 35701742
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaa 127  Q
    |||||| ||||||||| | |||| |  |||||||| ||||| |||||||||||| |||||| |||||||||    
T  35701812 attgtttttgaccaataagaagagaacataacaagattgtcccaaaagttgtaccaaaagaattgttcaaa 35701742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 14233614 - 14233545
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttca 125  Q
    ||||||| || |||||||| |||| |||| ||||| ||||||||||||||| ||| |||| | |||||||    
T  14233614 cattgttttttaccaatgagaagagagaacaacaaagttgtcacaaaagttataccaaaataattgttca 14233545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 27300448 - 27300525
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||| ||||||||| | |||| |  | |||||| ||||| ||||||||||||  ||||||||||||||||| ||||    
T  27300448 attgtttttgaccaataagaagagaatacaacaagattgtcccaaaagttgtaccgaaagagttgttcaaatatcact 27300525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 295648 - 295727
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| |||||||||||||| | |||| ||  |  |||||||||||||| | || ||| |||||||||||||||||||||    
T  295648 attgtttttgaccaatgaaaatagagaaaaaataaattgtcacaaaagttat-ctcaaatagttgttcaaataacactact 295727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 2597130 - 2597078
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  2597130 cattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 2597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 22767231 - 22767283
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| |||||||||||||||| |||| ||  | |||||||||||||||||    
T  22767231 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 22767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 24616447 - 24616487
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtc 97  Q
    |||||| ||||||||||||| ||||||||| ||||||||||    
T  24616447 attgtttttgaccaatgaaatgaaagaatagcaaggttgtc 24616487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 30927901 - 30927849
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  30927901 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 30927849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 45405804 - 45405724
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||||| |||| |||| || || |||||| |||| ||||||| ||||  |||||| ||||| |||||||    
T  45405804 attgtttttgaccaatgagaagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 45405724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 2935481 - 2935400
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2935481 cattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 2935400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 49361807 - 49361726
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49361807 cattgttattgaccaatgagaagaaagaataacaaagttgtcacaaaagttgtactaaaagagttgttcaaataacactact 49361726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 48205146 - 48205227
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48205146 cattgttattgatcaatgagaagaaaaaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 48205227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 48490483 - 48490402
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  48490483 cattgttattgaccaatgagaagaaaaaataacaagattgtcacaaaagttgtattaaaagagttgttcaaataacactact 48490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 51385410 - 51385337
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| |||| |||| ||||||| ||||||||||||||||| |||||||||||||    
T  51385410 cattgtttttgaccaatgaaaagagagaacaacatggttgtcccaaaagttgtactaaaatagttgttcaaata 51385337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 48117437 - 48117510
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||||||||| |||||||||||  |||| |||||||||||||    
T  48117437 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaata 48117510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 14839014 - 14838934
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| |||||| |  | |||||||||||| ||||| |||||| |||||||||||||||||| |||||||    
T  14839014 attgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactact 14838934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 29555781 - 29555730
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  29555781 aacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactact 29555730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 9159006 - 9158936
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaa 126  Q
    ||||||| |||||||||||||||| || | |||||||||||| |||||||||||  |||| ||||||||||    
T  9159006 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaa 9158936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 9027714 - 9027787
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| | |||| |||| |||||||||||  |||||||||||| |||| |||||||||||||    
T  9027714 cattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaata 9027787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 33971984 - 33972057
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| || |||||||| |||| |||| |||||||||||| ||||| |||||| |||| |||||||||||||    
T  33971984 cattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaata 33972057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 43149313 - 43149240
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| | |||| |||| |||||||||||  |||||||||||| |||| |||||||||||||    
T  43149313 cattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaata 43149240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 16295566 - 16295646
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| |||||| |||| ||||| |||||| |||||||||||| |||| ||||||  ||||| |||||||    
T  16295566 attgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaagttgtaccaaaatagttgtcaaaatatcactact 16295646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 44689905 - 44689985
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| |||||| |  | |||||||||||| |||||||||| | |||||| ||||||||||| |||||||    
T  44689905 attgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgttccaaaagaattgttcaaatatcactact 44689985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 45818034 - 45818113
Alignment:
Q  159 tacagatgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttattaacatgataacaaat 239  Q
    |||| ||||||||||||| ||||| ||| ||||||| ||| |||||||||||||||| |||||||| || |||||| ||||    
T  45818034 tacacatgataagaaaga-gataacattattttatcctatcatatgtttggtgcacatttgttattgacgtgataagaaat 45818113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 29706004 - 29706084
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| || ||||||||||||| |||| ||  | |||||||||||||||||| | ||| ||||||||||||| |||||||    
T  29706004 cattgttttttaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta-tcaaatagttgttcaaatatcactact 29706084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 29846861 - 29846788
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| || ||||| ||||||| || | |||||||||||| |||||||||||  |||| |||||||||||||    
T  29846861 cattgttttttaccaacgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaata 29846788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 43220104 - 43220031
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||| || | |||| |||||  ||||| |||||||| |||||||| ||||||||||||| |||||||    
T  43220104 ttgaccaatgagaatagagaacaacaaaattgtcccaaaagttatactaaaaaagttgttcaaatatcactact 43220031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 40821800 - 40821757
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||    
T  40821800 aacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaata 40821757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 20525626 - 20525556
Alignment:
Q  137 ttattatattatgtgtttgatgtacagatgataagaaagatgataatattgttttatcttattatatgttt 207  Q
    |||| |||| ||||||||| || | | |||||||||||||||||| |||| ||||||| ||| ||||||||    
T  20525626 ttatcatatcatgtgtttggtgcagatatgataagaaagatgatattattattttatcatatcatatgttt 20525556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 29057760 - 29057822
Alignment:
Q  67 accaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||||||| || | |||||||||||| |||||||||||  |||| | |||||||||||    
T  29057760 accaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaata 29057822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 29533863 - 29533921
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaa 115  Q
    |||||| ||||||||||| |||| |||| ||||| |||||| |||||||||||| ||||    
T  29533863 attgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaa 29533921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 7231976 - 7231896
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||| ||  |  ||||||||||||||||| | |||  |||||||||||| |||||||    
T  7231976 cattgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgta-tcaaatggttgttcaaatatcactact 7231896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 11173551 - 11173604
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgta 109  Q
    ||||||| |||||||||||||||| |||| ||  | ||||||||||||||||||    
T  11173551 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta 11173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 20380859 - 20380779
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||  |||| ||  | |||||||||||||||||  |||||  |||||||||||| |||||||    
T  20380859 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagttgt-ttaaaatggttgttcaaatatcactact 20380779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 28269907 - 28269987
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||| ||  | |||||| |||||||||| || | |  ||||||||||||||||||||    
T  28269907 cattgtttttgaccaatgaaaagatagaaaaaagaagttgtcgcaaaagttgt-ctcatatggttgttcaaataacactact 28269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 33074977 - 33075054
Alignment:
Q  59 tgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactac 136  Q
    |||| ||||||||| |||| | |||| ||||| |||||| |||| |||||||||||| ||||||  ||||| ||||||    
T  33074977 tgtttttgaccaataaaaaaagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatcactac 33075054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 44827054 - 44827127
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||| | |||||||||| || | ||||||||||||  ||||||||||  |||| |||||||||||||    
T  44827054 cattgtttttggctaatgaaaagacagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaata 44827127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 50745650 - 50745723
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||||||||| ||||| || ||  |||| | |||||||||||    
T  50745650 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaaattatagcaaaaaaattgttcaaata 50745723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 13159762 - 13159814
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  13159762 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 13159814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 32931888 - 32931836
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  32931888 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 32931836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 35368713 - 35368785
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| || ||||||||||||| || | |||||| ||||| |||||||||||  |||  |||||||||||||    
T  35368713 attgttttttaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaacaagttgttcaaata 35368785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 36819057 - 36819109
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  36819057 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36819109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 37215201 - 37215149
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| |||||||||||||||| |||| ||  | |||||||||||||||||    
T  37215201 cattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 37215149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 37303485 - 37303564
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| |||| ||||||||||| |||| ||  |  |||||||||||||||| || | | |||||||||||||||||||||    
T  37303485 attgtttttgatcaatgaaaagagagaaaaaataaattgtcacaaaagttgt-ctcatatagttgttcaaataacactact 37303564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 43894954 - 43894882
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| |||||||||||||||| || | ||||| |||||| ||||| || ||  |||| |||||||||||||    
T  43894954 attgtttttgaccaatgaaaagagagcacaacaaagttgtcccaaaaattatagcaaaaaagttgttcaaata 43894882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 54233471 - 54233419
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  54233471 cattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 54233419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 1100319 - 1100399
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1100319 attgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 1100399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 835977 - 836053
Alignment:
Q  61 ttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||||| |||| | ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  835977 ttattgaccaatgagaagagaaaataacaagattgtcccaaaagttgtaccaaaagagttgttcaaataacactact 836053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 50796108 - 50796183
Alignment:
Q  61 ttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||| | |||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  50796108 ttattgaccaatgaaaa-agagaatatcaaggttgtcccaaatgttgtacaaaaagagttgttcaaataacactact 50796183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 37947190 - 37947117
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||| |||| |||| |||||||||||| |||||||||||  |||| |||||||||||||    
T  37947190 cattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaata 37947117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 40240081 - 40240008
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||||||||| |||||||||||  |||| |||||||||||||    
T  40240081 cattgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaata 40240008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 8577472 - 8577399
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||| || | |||| |||||||||||| |||||||| ||| |||| |||||||||||||    
T  8577472 cattgtttttgaccaatgagaatagagaacaacaaggttgtcccaaaagttataccaaaatagttgttcaaata 8577399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 31244705 - 31244632
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||| |||| |||| |||| ||||||| |||| ||||||| |||| |||||||||||||    
T  31244705 cattgtttttgaccaatgagaagagagaacaacatggttgtcccaaatgttgtaccaaaatagttgttcaaata 31244632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 12990425 - 12990369
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactacttatta 142  Q
    |||||||||||| |||||||||||  |||||||||||||||||| ||||||| ||||    
T  12990425 aacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactcatta 12990369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 27954330 - 27954410
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||||| |||| |||| ||||| |||||  ||||| |||| |||||||| ||||||||||| |||||||    
T  27954330 attgtttttgaccaatgagaagagagaacaacaaagttgttccaaaaattgtgctaaaagaattgttcaaatatcactact 27954410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 41564849 - 41564769
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||| ||||| |||||| |||||||||||||||||| |||||||    
T  41564849 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactact 41564769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 26760663 - 26760745
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactactt 138  Q
    ||||||| ||||||||| |||||| || | |||||||||||| |||||||| ||  |||| ||||||| |||||||| |||||    
T  26760663 cattgtttttgaccaataaaaagagagcacaacaaggttgtctcaaaagttataacaaaaaagttgtttaaataacattactt 26760745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 11897283 - 11897348
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||| | |||  |||||| |||||||||||||||| |||||  ||||||||||||||||||    
T  11897283 ttgaccaataagaagggagaatatcaaggttgtcacaaaaattgtaacaaaagagttgttcaaata 11897348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 30596823 - 30596888
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||||||||||||||| || || |||||| |||| ||||||| |||| || ||||||||||    
T  30596823 ttgaccaatgaaaagaaagaacaataaagttgtctcaaaggttgtaccaaaatagctgttcaaata 30596888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 39010915 - 39010995
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||| ||  | ||||||||||||||||| || | |  ||||||||||||||||||||    
T  39010915 cattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt-ctcatatggttgttcaaataacactact 39010995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 40053015 - 40053088
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||||||| |||| ||||| |||||| ||||  |||||| |||| ||||||| ||||| |||||||    
T  40053015 ttgaccaatgaaaagagagaacaacaaagttgtctcaaagattgtaccaaaatagttgttaaaatatcactact 40053088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 21263132 - 21263204
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactac 136  Q
    ||||||||  |||| | |||| |||||||||||| ||||| |||||| |||| ||||||||||||| ||||||    
T  21263132 ttgaccaacaaaaacatagaacaacaaggttgtctcaaaaattgtacaaaaatagttgttcaaatatcactac 21263204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 23399958 - 23399878
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||| ||||| |||||| |||||||||||| ||||| |||||||    
T  23399958 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgtttaaatatcactact 23399878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 29489329 - 29489277
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | ||||||||| |||||||||||||| ||||||||    
T  29489329 cattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgt 29489277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 46903572 - 46903652
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||||| |||| |||| ||||| |||||| |||| ||||||| ||||  |||||| ||||| |||||||    
T  46903572 attgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactact 46903652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 48962088 - 48962160
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| ||||||||| | |||| |  | |||||||||||| ||||| |||||| ||||||||||||||||||    
T  48962088 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaata 48962160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 11121592 - 11121654
Alignment:
Q  67 accaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||| |||| | || |||||| |||||||||||||| ||| |||| |||||||||||||    
T  11121592 accaatgagaagagacaacaacaagattgtcacaaaagttataccaaaatagttgttcaaata 11121654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 32966368 - 32966441
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| |||||| |||| ||  |||||||||||||||||||    ||| |||||||||||||    
T  32966368 cattgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgttagtaaatagttgttcaaata 32966441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 13813659 - 13813711
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  13813659 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 13813711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 16836084 - 16836032
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||||||||| ||||| ||  | |||||||||||||||||    
T  16836084 cattgtttttgaccaatgaaaagtaagaaaaaagaagttgtcacaaaagttgt 16836032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 25130804 - 25130856
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  25130804 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 25130856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 28457317 - 28457237
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactac 136  Q
    ||||||| |||||||||||||| | |||| || || |||||| |||| ||||||| ||||  |||||| ||||| ||||||    
T  28457317 cattgtttttgaccaatgaaaatagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactac 28457237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 29094685 - 29094645
Alignment:
Q  89 aaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  29094685 aaggttgtcccaaaagttgtatcaaaagagttgttcaaata 29094645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 29638853 - 29638897
Alignment:
Q  93 ttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||| ||||| |||||| |||||||||||||||||| |||||||    
T  29638853 ttgtcccaaaaattgtaccaaaagagttgttcaaatatcactact 29638897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 43757688 - 43757768
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| || ||||||||||||| |||| ||||| |||||| ||||| || ||| |||| ||||||  ||||| |||||||    
T  43757688 attgtttttaaccaatgaaaagagagaacaacaaagttgtctcaaaaattataccaaaatagttgtcaaaatatcactact 43757768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 25272692 - 25272770
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25272692 cattgttattgaccaataagaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 25272770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 49142487 - 49142406
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49142487 cattgttattgaccaatgagaagaaaaaataacaaggttgtcacaaaagttgtaataaaagagttgttcaaataacactact 49142406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 33465007 - 33464930
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  33465007 cattgttattgatcaatgaaaagaaaaaataacaaggttgtcacaaaagttgtactaagaga-ttgttcaaataacact 33464930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 40108225 - 40108300
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataaca 132  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  40108225 cattattattgaccaatgagaagaaagaataacaaggttgtcac-aaagttgtactaaaagagttgtttaaataaca 40108300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 45335972 - 45336045
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||| |||||| |||| |||||||||||| ||||| |||||| |||||||| ||||||||| |||||||    
T  45335972 ttgaccaataaaaagagagaacaacaaggttgtcccaaaatttgtaccaaaagagtagttcaaatatcactact 45336045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 12141986 - 12142065
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||||||||||||||| || || |||||||||||||||||| | |||  |||||||||||| |||||||    
T  12141986 attgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgta-tcaaatggttgttcaaatatcactact 12142065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 23034282 - 23034202
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | || | || | |||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  23034282 attgtttttgaccaataagaaaagagcacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactact 23034202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 22331181 - 22331100
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| || ||||||||||||| || |||||||||||||| ||||| |||||  |||| | |||||||||||||| ||||    
T  22331181 cattgttttttaccaatgaaaagagagcataacaaggttgtcccaaaaattgtagcaaaaaaattgttcaaataacattact 22331100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 38197762 - 38197835
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||| ||||| |||||||||||  |||| |||||||||||||    
T  38197762 cattgtttttgaccaatgaaaagatagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaata 38197835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 44185278 - 44185355
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||| ||||||||||| |||| |||| ||  |||||||| |||||||||||  |||||||||||||||||| ||||    
T  44185278 attgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatcact 44185355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 24380690 - 24380610
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||  |||||||||||| |||||||||||||||||| |||||||    
T  24380690 attgtttttgaccaataagaagagaacacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcactact 24380610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 29923802 - 29923852
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  29923802 aacaaggttgtc-caaaagttgtaccaaaagagttgttcaaatatcactact 29923852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 47945114 - 47945165
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| |||||||||||  |||||||||||||||||| |||||||    
T  47945114 aacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactact 47945165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 47950544 - 47950595
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| |||||||||||  |||||||||||||||||| |||||||    
T  47950544 aacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactact 47950595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 48639325 - 48639274
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||  |||||||||||| |||||||||||||||||| |||||||    
T  48639325 aacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcactact 48639274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 28109313 - 28109211
Alignment:
Q  137 ttattatattatgtgtttgatgtacagatgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttattaacatgataaca 236  Q
    |||| ||||||||| |||| |||| | |||||||||||  |||||  ||| ||||||| |||  ||||||||||||||||||| |||| | ||||||| |    
T  28109313 ttatcatattatgtatttggtgtatacatgataagaaatgtgatagaattattttatcatatcgtatgtttggtgcacacttgctattgatatgataaga 28109214  T
Q  237 aat 239  Q
    |||    
T  28109213 aat 28109211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 37848590 - 37848517
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | ||||||||| ||  ||||||||||  |||| |||||||||||||    
T  37848590 cattgtttttgaccaatgaaaagagagcacaacaaggttatcctaaaagttgtagcaaaaaagttgttcaaata 37848517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 1709386 - 1709466
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| |||||| |  | |||||| ||||| ||||| || ||| |||||||||||||||||| |||||||    
T  1709386 attgtttttgaccaataaaaagagaacacaacaagattgtcccaaaaattataccaaaagagttgttcaaatatcactact 1709466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 7295569 - 7295641
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| ||||||||||| |||| ||||||||||||||||  ||||||||||   |||| |||||| ||||||    
T  7295569 attgtttttgaccaatgagaagagagaataacaaggttgttccaaaagttgtctcaaaaaagttgtacaaata 7295641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 32315928 - 32316000
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| ||||||||| | |||| |||| ||||| |||||||||||||||||  | ||| |||||||||||||    
T  32315928 attgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaata 32316000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 37970035 - 37970115
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||||| |||| |||| ||||| |||||| |||| ||||||| ||||  |||||| ||||| |||||||    
T  37970035 attgtttttgaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatggttgttaaaatatcactact 37970115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 41538582 - 41538662
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||| |||||||||||  |||||| ||||||||||| |||||||    
T  41538582 attgtttttgaccaataagaagataacacaacaaggttgtcccaaaagttgtatcaaaagaattgttcaaatatcactact 41538662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 41910154 - 41910074
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | ||||||||||||  ||||||||||| |||||| ||||||||||| |||||||    
T  41910154 attgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaagaattgttcaaatatcactact 41910074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 2790278 - 2790359
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaa-gagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||  ||  | ||||||||| ||||||| |||||| |||||||||||||| |||||||    
T  2790278 cattgtttttgaccaatgaaaagagagagaaaagaagttgtcacataagttgt-ctaaaatgagttgttcaaatatcactact 2790359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 42078180 - 42078110
Alignment:
Q  164 atgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttattaacatgataa 234  Q
    ||||||||||| ||||||| ||| ||||||| ||| |||| |||| |||||| ||| |||| |||||||||    
T  42078180 atgataagaaatatgataacattattttatcatatcatatttttgatgcacatttgctattgacatgataa 42078110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 2600504 - 2600423
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| ||||||||||| |||| |||| ||||| |||||| |||| ||||||| ||||  |||||  ||||| |||||||    
T  2600504 cattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactact 2600423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 27704537 - 27704614
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||| ||||||||| | |||| |  | ||||| |||||| |||||||||||  |||||||||||||||||| ||||    
T  27704537 attgtttttgaccaataagaagagaacacaacaaagttgtcccaaaagttgtaacaaaagagttgttcaaatatcact 27704614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 48866900 - 48866820
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| ||||| |||||||||| |||| ||  |||||||||||||||||||  | ||| || |||||||||| |||||||    
T  48866900 cattgtttttgactaatgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcactact 48866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 116732 - 116784
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||| ||| ||||||||||| |||||| ||||||| ||||||||    
T  116732 cattgtttttgacgaataaaaagaaagaaaaacaagattgtcactaaagttgt 116784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 42431824 - 42431876
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  42431824 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 42431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 4173094 - 4173013
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  4173094 cattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaggttgtactaaaagagttgttcaaataactctact 4173013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 9957171 - 9957090
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  9957171 cattgttattgaccaattagaagaaagaataataaggttgtcacaaaaattgtactaaaagagttgttcaaataatactact 9957090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 40201090 - 40201018
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  40201090 cattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtac-aaaaaaattgttcaaata 40201018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 17574194 - 17574121
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||| ||| ||||||||| |||||||||||| |||||||||||| |||| |||||||||||||    
T  17574194 cattgtttttgaccagtgagaagaaagaacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaata 17574121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 20985499 - 20985419
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||| |||||||||||||| |||||| ||||||||| || ||| |||||||||||||||| | |||||||||||||||||||    
T  20985499 cattattattgaccaatgagaagaaaaaataacaagattatcataaaagttgtactaaaa-aattgttcaaataacactact 20985419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 12612987 - 12612905
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactactt 138  Q
    ||||||| ||||||||||| |||| |||| |||||||||||| |||||||||||| ||||  |||||||||||| || |||||    
T  12612987 cattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcattactt 12612905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 38919955 - 38920029
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactactt 138  Q
    ||||||||||| |||| |||| ||||||||||||  ||||||||||| |||||||||||||||||| | ||||||    
T  38919955 ttgaccaatgagaagagagaacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatctctactt 38920029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 18729246 - 18729174
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| ||||||||| |||||| |  | |||||||||||| |||||||||||| ||||||||||||||||||    
T  18729246 attgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaata 18729174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 12203257 - 12203319
Alignment:
Q  67 accaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||| |||| || | |||||| |||||||||||||||||| ||||||||||||||||||    
T  12203257 accaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaagagttgttcaaata 12203319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 21771435 - 21771362
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||| |||||| |  | |||||||||||| |||||||| ||| |||||||||||||||||| |||||||    
T  21771435 ttgaccaataaaaagataacacaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatcactact 21771362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 33893687 - 33893760
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||| |||||||||| || | |||||||||||| ||||||||||| ||||| | |||||||||||    
T  33893687 cattgtttttgacaaatgaaaagatagcacaacaaggttgtcccaaaagttgtagtaaaaaaattgttcaaata 33893760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 35616770 - 35616690
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |||| |||||||||||| ||||| || ||| |||| ||||||||||||| |||||||    
T  35616770 attgtttttgaccaataagaagagagaacaacaaggttgtcccaaaatttataccaaaatagttgttcaaatatcactact 35616690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 37821110 - 37821030
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||| |||||||||||| |||| ||||||||||||| |||||||    
T  37821110 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcactact 37821030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 26449116 - 26449046
Alignment:
Q  164 atgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttattaacatgataa 234  Q
    ||||||||||||||||||  ||| ||||||| ||| || |||||| |||||| |||||||| |||||||||    
T  26449116 atgataagaaagatgatatcattattttatcctatcatgtgtttgttgcacatttgttattgacatgataa 26449046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 35595956 - 35595883
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||| | || | |||||| ||||| ||||| ||||| ||||| |||||||||||||    
T  35595956 cattgtttttgaccaatgaaaaaagagcacaacaagattgtcccaaaaattgtaataaaaaagttgttcaaata 35595883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 43153030 - 43152957
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||| |||| |||| ||||| ||||||  || |||||||| |||| |||||||||||||    
T  43153030 cattgtttttgaccaatgagaagagagaacaacaaagttgtcctaagagttgtaccaaaatagttgttcaaata 43152957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 9198069 - 9198004
Alignment:
Q  164 atgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttattaacatga 231  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||| ||  ||| ||||||||||||||    
T  9198069 atgataaaaaagatgataatattattttatcatattatgtgtttgatg--cacgtgttattaacatga 9198004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 11464093 - 11464041
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| |||||| |||| |||||||||||||| ||||||||    
T  11464093 cattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgt 11464041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 14522934 - 14522858
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataaca 132  Q
    ||||||| ||||||||| |||||| || | || ||| ||||| |||||||||||  |||| ||||||||||||||||    
T  14522934 cattgtttttgaccaataaaaagatagcacaataagattgtcccaaaagttgtagcaaaaaagttgttcaaataaca 14522858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 28811529 - 28811581
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| |||||||||||||||| |||| ||  |||||||||||||||||||    
T  28811529 cattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt 28811581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 39032573 - 39032493
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||| ||||| |||||  |||||||||||||||||| |||||||    
T  39032573 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactact 39032493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 42364531 - 42364603
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| |||||||||||||||| |  | |||||||||||| ||||||||||   |||| |||||||||||||    
T  42364531 attgtttttgaccaatgaaaagataacacaacaaggttgtcccaaaagttgttggaaaaaagttgttcaaata 42364603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 2863658 - 2863708
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaa 114  Q
    |||||||||||||||| | || |||||||||||| ||||| ||||||||||    
T  2863658 ttgaccaatgaaaagagataacaacaaggttgtcccaaaaattgtactaaa 2863708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 5005215 - 5005273
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaa 115  Q
    |||||| ||||||||||| |||| |||| ||||| |||||| |||||||||||| ||||    
T  5005215 attgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaa 5005273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 2117610 - 2117530
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| || ||||||||||| | |||| ||  | |||||||||||||||||| | ||| ||||||||||||| |||||||    
T  2117610 cattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaagttgta-tcaaatagttgttcaaatatcactact 2117530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 3518284 - 3518365
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| ||||||||||| |||| |||| ||||| |||||| |||| ||||||| ||||  |||||  ||||| |||||||    
T  3518284 cattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactact 3518365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 6458868 - 6458941
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| |||||| || | |||||||||||| ||||| || ||  |||| |||||||||||||    
T  6458868 cattgtttttgaccaattaaaagagagcacaacaaggttgtcccaaaaattatagcaaaaaagttgttcaaata 6458941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 14126547 - 14126596
Alignment:
Q  88 caaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||| |||||| | ||| |||||||||||||||||| |||||||    
T  14126547 caaggttgtcccaaaagctctaccaaaagagttgttcaaatatcactact 14126596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 27392672 - 27392592
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| | || ||  | ||||||||||||||||| || | |  ||||||||||||||||||||    
T  27392672 cattgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttgt-ctcatatggttgttcaaataacactact 27392592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 39458742 - 39458822
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| | || || || |||||||||||| ||||| ||| |  |||||| |||||||||||||    
T  39458742 cattgtttttgaccaatgaaaagagataaaaaaaaagttgtcacaaaaattgta-taatatggttgtttaaataacactact 39458822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 39595375 - 39595428
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgta 109  Q
    ||||||| |||||||||||||||| |||| ||  | ||||||||||||||||||    
T  39595375 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta 39595428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 125194 - 125273
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| |||||||||||||||| |||| ||  | |||||| ||||||||||| | |||  |||||||||||| |||||||    
T  125194 attgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgta-tcaaatggttgttcaaatatcactact 125273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 3849612 - 3849680
Alignment:
Q  69 caatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||| || | |||||||||||| |||||||||||  |||| || |||||| ||| |||||||    
T  3849612 caatgaaaagatagcacaacaaggttgtctcaaaagttgtagcaaaaaagatgttcatatatcactact 3849680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 8959261 - 8959313
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| |||||| |||| |||||||||||| | ||||||||    
T  8959261 cattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgt 8959313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 9940156 - 9940228
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| |||||||||||||||| |||| ||||| ||||||  |||| |||||  |||| |||| ||||||||    
T  9940156 attgtttttgaccaatgaaaagagagaacaacaaagttgtcctaaaaattgtatcaaaatagttattcaaata 9940228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 11306798 - 11306877
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| || ||||||||||||| |||| ||  | |||||| ||||||||||| | ||| ||||||||||||| |||||||    
T  11306798 attgtttttaaccaatgaaaagagagaaaaaagaagttgtctcaaaagttgta-tcaaatagttgttcaaatatcactact 11306877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 15622145 - 15622197
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  15622145 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 15622197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 19437359 - 19437430
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| ||||||||| |||||| |||| |  |||||||||| ||| |||||||| ||| |||||||||||||    
T  19437359 attgtttttgaccaatcaaaagagagaaaagaaaggttgtcaaaaatgttgtact-aaatagttgttcaaata 19437430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 28501718 - 28501770
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  28501718 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 28501770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 33823664 - 33823612
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  33823664 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 33823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 3366132 - 3366213
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3366132 cattgttattgaccaatgagaagaaagaataataaggttgtcacaaaagttatactaaaagagttgttcaaataacactact 3366213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 37076754 - 37076835
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  37076754 cattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaaattgtactaaaagagttgttcaaataacattact 37076835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 9384476 - 9384557
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  9384476 cattgttattgaccaatgcgaagaaagaataacaagattgtcacaaaagttgtattaaaagagttgttcaaataacactact 9384557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 12208543 - 12208624
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  12208543 cattgttattgaccaatgaaaaaaaagaataacaaaattgttacaaaagttgtactaaaagagttgttcaaataacactact 12208624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 28264631 - 28264710
Alignment:
Q  58 ttgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||| |||||| |||| | |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  28264631 ttgttattgaacaatgagaagagataataacaaggttgtcttaaaagttgtactaaaagagttgttcaaataacactact 28264710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 23141463 - 23141536
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||| |||| |||| |||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  23141463 ttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactact 23141536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 23553253 - 23553326
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||| |||| |||| |||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  23553253 ttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactact 23553326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 30340103 - 30340176
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||||| |||| |||| |||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  30340103 ttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactact 30340176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 1277833 - 1277913
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||||||||| |||| |||||| |||| |||||  ||||||| ||| ||||||||||||||||||| ||||||    
T  1277833 attgttattgaccaatgagaagagagaatatcaagattgtcctaaaagttatacaaaaagagttgttcaaataatactact 1277913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 3681479 - 3681547
Alignment:
Q  71 atgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactactta 139  Q
    |||| |||| |||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  3681479 atgagaagagagaatatcaaggttgtcccaaaaattgtacaaaaagagttgttcaaataacactactta 3681547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 27538902 - 27538829
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||||||||||| | |||||||||||| | |||||||||  |||| |||||||||||||    
T  27538902 cattgtttttgaccaatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaaaaagttgttcaaata 27538829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 33569694 - 33569747
Alignment:
Q  81 agaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||||||||    
T  33569694 agaataacaaagttgtctcaaaagttgtaccaaaagagttgttcaaataacact 33569747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 35008063 - 35007998
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||||||||||| || | |||||||||||| ||||||||||| ||||| |||||||||||||    
T  35008063 ttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaata 35007998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 43205194 - 43205275
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| || | ||||| |||||| |||||||||||  |||| |||||||||||||||| ||||    
T  43205194 cattgtttttgaccaatgaaaagagagcacaacaaagttgtcccaaaagttgtagcaaaaaagttgttcaaataacattact 43205275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 29463282 - 29463198
Alignment:
Q  150 tgtttgatgtacagatgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttattaacatgataa 234  Q
    |||||| |||||| ||||||||||||||||||  ||| ||||||| ||| ||||||||| | ||||||||||||| || ||||||    
T  29463282 tgtttggtgtacatatgataagaaagatgatagcattattttatcatatcatatgtttgatacacacttgttattgacgtgataa 29463198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 8757645 - 8757718
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| | |||| |||| |||||||||||  |||||||||||| |||| |||||||||||||    
T  8757645 cattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaata 8757718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 11828790 - 11828717
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | ||||||||||||  ||||||||||  |||| |||||||||||||    
T  11828790 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaata 11828717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 13711162 - 13711242
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| || ||||||||||||| |||| ||  | ||||||||||||||||||| |||| ||||||||||||| |||||||    
T  13711162 cattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtac-aaaatagttgttcaaatatcactact 13711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 27529628 - 27529701
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||||||||||| | |||||||||||| | |||||||||  |||  |||||||||||||    
T  27529628 cattgtttttgaccaatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaagaagttgttcaaata 27529701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 35705887 - 35705814
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||| ||||| |||||||||||  |||| |||||||||||||    
T  35705887 cattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaata 35705814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 45202102 - 45202029
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||| ||||||||||| || | |||||||||||| |||||||||||  |||| |||||||||||||    
T  45202102 cattgtttttgatcaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaata 45202029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 12257003 - 12257083
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | ||||||  | |||||||||||| ||||| |||||| |||| ||||||||||||| |||||||    
T  12257003 attgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgtaccaaaaaagttgttcaaatatcactact 12257083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 38598318 - 38598239
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | ||||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  38598318 attgtttttgaccaataagaagagaacacaacaaggttgtcacaaaagttatactaaaa-agttgttcaaatatcactact 38598239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 5852589 - 5852640
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| |||||||| ||| |||||||||||||||||| |||||||    
T  5852589 aacaaggttgtcccaaaagttttaccaaaagagttgttcaaatatcactact 5852640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 26387771 - 26387720
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| |||||||||||  |||||||||||||||||| |||||||    
T  26387771 aacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactact 26387720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 28679258 - 28679301
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  28679258 aacaaggttgtcccaaaagttgtaccaaaagagttgttcaaata 28679301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 38533166 - 38533087
Alignment:
Q  58 ttgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||| ||||||||||| || | |||| |||||||||||| ||||| |||||| |||||| || |||||||| |||||||    
T  38533166 ttgtttttgaccaatgacaatagagaacaacaaggttgtcccaaaaattgtaccaaaagaattattcaaatatcactact 38533087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 3091842 - 3091922
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||| ||  | |||||||||||||||||| | ||| | ||||||||||| |||||||    
T  3091842 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta-tcaaataattgttcaaatatcactact 3091922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 6885450 - 6885377
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||| ||||||||||| || ||||||| ||||||  |||| ||||| ||||| |||||||||||||    
T  6885450 cattgtttttgatcaatgaaaagagagcataacaaagttgtcctaaaaattgtattaaaaaagttgttcaaata 6885377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 35203719 - 35203646
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||||||||| ||||| |||||  |||| | |||||||||||    
T  35203719 cattgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaaattgtagcaaaaaaattgttcaaata 35203646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 35798310 - 35798391
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| || |||||| ||||||||| | |||||||||||| ||||| || ||  |||| |||||||||||||||| ||||    
T  35798310 cattgtttttaaccaataaaaagaaagcacaacaaggttgtcccaaaaattataacaaaaaagttgttcaaataacattact 35798391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 36133075 - 36133155
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| || ||||||||||||| |||| ||  | |||||||||||||||||| | ||| ||||||||||||| |||||||    
T  36133075 cattgttcttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta-tgaaatagttgttcaaatatcactact 36133155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 37064167 - 37064232
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||||| |||| | || ||||||||| || |||||||||||| |||||||||| |||||||    
T  37064167 ttgaccaatgagaagagaaaacaacaaggttatcccaaaagttgtaccaaaagagttgatcaaata 37064232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 40115616 - 40115689
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||  |||||||||| || | |||||||||||| ||||| ||||| ||||| |||||||||||||    
T  40115616 cattgtttttgatgaatgaaaagagagcacaacaaggttgtcccaaaaattgtagtaaaaaagttgttcaaata 40115689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 44897735 - 44897800
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||| |||||| |  | |||||||||||| |||||||||||  ||||||||||||||||||    
T  44897735 ttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaata 44897800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 1151631 - 1151711
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| |||||||||||||| | |||| ||||| |||||| |||| ||||||| |||| ||||||  ||||| |||||||    
T  1151631 attgtttttgaccaatgaaaaaagagaacaacaaagttgtctcaaaggttgtaccaaaatagttgtcaaaatatcactact 1151711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 13881196 - 13881268
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaat 128  Q
    ||||||| |||||||||||||||| || | || || ||||||||||||||||||  |||| |||| |||||||    
T  13881196 cattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaaaagtttttcaaat 13881268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 14021321 - 14021393
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaat 128  Q
    ||||||| |||||||||||||||| || | || || ||||||||||||||||||  |||| |||| |||||||    
T  14021321 cattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaaaagtttttcaaat 14021393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 16463394 - 16463466
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| ||||||||| | |||| || | |||||| ||||| |||||||||||| | ||||||||||||||||    
T  16463394 attgtttttgaccaataagaagagagcacaacaagattgtcccaaaagttgtaccataagagttgttcaaata 16463466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 17999845 - 17999917
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaat 128  Q
    ||||||| |||||||||||||||| |  | |||||||||||| |||||||| ||  |||| ||||||||||||    
T  17999845 cattgtttttgaccaatgaaaagatatcacaacaaggttgtcccaaaagttatagcaaaaaagttgttcaaat 17999917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 34141545 - 34141625
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | ||||| |||||  |||||||||||| |||||||||||||||||| |||||||    
T  34141545 attgtttttgaccaataagaagagaacacaacaaagttgttccaaaagttgtaccaaaagagttgttcaaatatcactact 34141625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 35518377 - 35518449
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| ||||||||| | |||| |||| ||||| |||||| |||||||||||  |||| |||||||||||||    
T  35518377 attgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttcaaata 35518449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 38027584 - 38027504
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||  |||||||| |||||||||||||||| ||||| |||||||    
T  38027584 attgtttttgaccaataagaagagaacacaacaaggttgtttcaaaagttatactaaaagagttgtttaaatatcactact 38027504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 12600149 - 12600227
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacacta 135  Q
    ||||||| || ||||||||||||| |||| ||  | |||||||||||||||||| | ||| ||||||||||||| |||||    
T  12600149 cattgttcttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta-tgaaatagttgttcaaatatcacta 12600227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 4114397 - 4114343
Alignment:
Q  61 ttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaa 115  Q
    ||||||||||||||||| | ||||||| ||||||||| |||||||| ||| ||||    
T  4114397 ttattgaccaatgaaaaaagagaataataaggttgtctcaaaagttttaccaaaa 4114343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 6453039 - 6452961
Alignment:
Q  143 tattatgtgtttgatgtacagatgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgtt 221  Q
    ||||||||||||| || ||| ||||||  ||||||||| | ||  ||||||| ||| |||||||||||| |||||||||    
T  6453039 tattatgtgtttggtgcacatatgatataaaagatgatgacatgattttatcatatcatatgtttggtgtacacttgtt 6452961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 43076401 - 43076478
Alignment:
Q  59 tgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||| ||||||||| |||||  |||| |||||||| || ||||||||| ||  |||||||||||||||||| |||||||    
T  43076401 tgtttttgaccaataaaaagtgagaacaacaaggtcgt-acaaaagttatatcaaaagagttgttcaaatatcactact 43076478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 43515003 - 43515065
Alignment:
Q  67 accaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| |||||| |||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  43515003 accaataaaaagagagaacattaaggttgtcccaaaagttgtaacaaaagagttgttcaaata 43515065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 11164346 - 11164274
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| || ||||||||||||| |||| ||  | |||||||||||||||||| | ||| |||||||||||||    
T  11164346 cattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta-tcaaatagttgttcaaata 11164274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 13104580 - 13104660
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||| ||  | |||||||||||| |||| || | |  ||||||||||||||||||||    
T  13104580 cattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgt-ctcatatggttgttcaaataacactact 13104660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 22296091 - 22296026
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||||||||| | || | |||||||||||| ||||| |||||  |||| |||||||||||||    
T  22296091 ttgaccaatgaaaaaagagcacaacaaggttgtcccaaaaattgtagaaaaaaagttgttcaaata 22296026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 31514449 - 31514392
Alignment:
Q  167 ataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttatt 224  Q
    |||||||| ||||||| ||| |||||||  ||||||||||||||||||| ||| ||||    
T  31514449 ataagaaatatgataacattattttatcggattatatgtttggtgcacatttgatatt 31514392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 32750099 - 32750179
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||| ||  | |||||||||||| |||| || | |  ||||||||||||||||||||    
T  32750099 cattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgt-ctcatatggttgttcaaataacactact 32750179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 38724287 - 38724206
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||| ||| |||| ||||| |||||| |||| ||||||| ||||  |||||  ||||| |||||||    
T  38724287 cattgtttttgaccaatgaatagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactact 38724206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 43791760 - 43791688
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt-actaaaagagttgttcaaata 129  Q
    |||||| ||||||||| |||||| |||| |   ||||||||||||||||||| |||||||| ||||||||||||    
T  43791760 attgtttttgaccaataaaaagagagaaaaggtaggttgtcacaaaagttgtcactaaaag-gttgttcaaata 43791688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 12358414 - 12358466
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| |||||| |||| | |||||||||||| ||||||||    
T  12358414 cattgtttttgaccaataaaaagatagaaaagcaaggttgtcaccaaagttgt 12358466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 18949108 - 18949179
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| ||||||||| ||||||||||| || || |||||||||||||||||  | ||| |||||| ||||||    
T  18949108 attgtttttgaccaataaaaagaaagaaaaagaa-gttgtcacaaaagttgttatgaaatagttgtacaaata 18949179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 23048053 - 23048001
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  23048053 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 23048001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 29795537 - 29795589
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| |||||||||||||||| |||| ||   ||||||||||||||||||    
T  29795537 cattgtttttgaccaatgaaaagagagaaaaaagtggttgtcacaaaagttgt 29795589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 36383563 - 36383615
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  36383563 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 37966457 - 37966509
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  37966457 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 37966509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 14518628 - 14518531
Alignment:
Q  142 atattatgtgtttgatgtacagatgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttattaacatgataacaaat 239  Q
    |||| ||||||||||||  || | ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| ||||||||| ||||    
T  14518628 atatcatgtgtttgatgcgcacaagataagaaagatgataatattattttatcatatcatatgtttggtgcacacttgttattcacatgataaaaaat 14518531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 37775392 - 37775318
Alignment:
Q  61 ttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacacta 135  Q
    |||||||||||||| || | ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  37775392 ttattgaccaatgataatagagaataacaaggttgtctcaaaagttgtacgaaaagagttgttcaaataacacta 37775318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 46355260 - 46355180
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||||||||| || | |||||| ||| |||||| |||||||||||| |||||||||||||||| |||||||||    
T  46355260 attgttattgaccaatgagaaaagagaataccaaagttgtcccaaaagttgtacaaaaagagttgttcaaacaacactact 46355180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 50291384 - 50291464
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  50291384 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaataacactact 50291464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 54801452 - 54801378
Alignment:
Q  61 ttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacacta 135  Q
    |||||||||||||| |||| |||||||||| |||||| ||||| || ||  ||||||||||||||||||||||||    
T  54801452 ttattgaccaatgagaagagagaataacaaagttgtctcaaaaattatatcaaaagagttgttcaaataacacta 54801378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 4878068 - 4878141
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||||||||| |||||||||||  |||| |||||||||||||    
T  4878068 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaata 4878141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 45678364 - 45678437
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| |||||| |||| |||||||||||  |||||||||||| |||| |||||||||||||    
T  45678364 cattgtttttgaccaataaaaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaata 45678437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 29577406 - 29577333
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| |||| |||||||||||| ||||| |||||| |||  || ||||||||||    
T  29577406 cattgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaaattgtacaaaagtagatgttcaaata 29577333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 33776995 - 33777068
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| |||||| |||| ||||||||| || ||||| |||||| |||| |||||||||||||    
T  33776995 cattgtttttgaccaataaaaagagagaacaacaaggttatcccaaaaattgtaccaaaatagttgttcaaata 33777068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 53781807 - 53781754
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgta 109  Q
    ||||||| |||||||||||||||| || |||||||||||||| |||||||||||    
T  53781807 cattgtttttgaccaatgaaaagagagcataacaaggttgtcccaaaagttgta 53781754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 8614284 - 8614364
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | ||||||  | |||||||||||| ||||| |||||| |||| ||||||||||||| |||||||    
T  8614284 attgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgtacaaaaaaagttgttcaaatatcactact 8614364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 18944419 - 18944467
Alignment:
Q  89 aaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  18944419 aaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactact 18944467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 3475970 - 3476021
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    |||||| ||||||||||||||||||||| || |||||||||||||| |||||    
T  3475970 attgtttttgaccaatgaaaagaaagaaaaataaggttgtcacaaatgttgt 3476021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 41170874 - 41170925
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    |||||| ||||||||||||| ||||||||| |||||||||| ||||||||||    
T  41170874 attgtttttgaccaatgaaatgaaagaatagcaaggttgtcccaaaagttgt 41170925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 4896470 - 4896390
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||| ||  |||||||||||||||||||  | ||| || |||||||||| |||||||    
T  4896470 cattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcactact 4896390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 22893969 - 22894042
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| |||||| || | |||||| ||||| |||||||||||  |||| |||||||||||||    
T  22893969 cattgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaata 22894042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 22945637 - 22945710
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| |||||| || | |||||| ||||| |||||||||||  |||| |||||||||||||    
T  22945637 cattgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaata 22945710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 31413748 - 31413683
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||| |||||| || | |||||||||||||||||| |||||  |||| |||||||||||||    
T  31413748 ttgaccaataaaaagagagcacaacaaggttgtcacaaaacttgtagcaaaaaagttgttcaaata 31413683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 43759142 - 43759070
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||| ||| |||||| |||| ||||||||||||| ||| ||||||| ||||||||||| |||||| |||||||    
T  43759142 ttgacaaatcaaaagatagaaaaacaaggttgtcataaaggttgtac-aaaagagttgtacaaatatcactact 43759070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 47998695 - 47998774
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| ||||||||||||||||||||| || || ||| ||||||||||||||  ||| || ||||||||||| |||||||    
T  47998695 cattgtttttgaccaatgaaaagaaagaa-aaaaaagttatcacaaaagttgtatcaaatga-ttgttcaaatatcactact 47998774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 21766678 - 21766726
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||||||||| |||||||| ||| |||||||||||||||||| ||||    
T  21766678 aacaaggttgtcccaaaagttataccaaaagagttgttcaaatatcact 21766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 32574379 - 32574459
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||||||||| |||| | |||| ||| ||||||  ||||||| ||| |||| | |||||||||||||| ||||    
T  32574379 attgttattgaccaatgagaagagataataccaaagttgtcttaaaagttatacaaaaaaaattgttcaaataacattact 32574459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 42915188 - 42915109
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| || ||||||||||||| |||| ||  | |||||||||||||||||| | ||| ||||||||||||| |||||||    
T  42915188 attgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta-tcaaatagttgttcaaatatcactact 42915109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 136
Target Start/End: Complemental strand, 1728058 - 1727979
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactac 136  Q
    |||||| ||||||||| | ||||||  | |||||||||||| ||||| ||||||||||| | || |||||||| ||||||    
T  1728058 attgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgtactaaaaaaattattcaaatatcactac 1727979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 1868833 - 1868790
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||    
T  1868833 aacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaata 1868790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 1987683 - 1987624
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaa 115  Q
    ||||||| |||||||||||||||| |||| ||||| |||||| |||| ||||||| ||||    
T  1987683 cattgtttttgaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaa 1987624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 32294692 - 32294641
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| ||||| || ||| |||||||||||||||||| |||||||    
T  32294692 aacaaggttgtcccaaaaattataccaaaagagttgttcaaatatcactact 32294641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 36110265 - 36110316
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||| ||||| |||||  |||||||||||||||||| |||||||    
T  36110265 aacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactact 36110316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 4577676 - 4577737
Alignment:
Q  67 accaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||||||| || | |||||||||||| |||||||||||  |||| |||||||||||||    
T  4577676 accaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa-agttgttcaaata 4577737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 4949203 - 4949145
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaa 115  Q
    |||||| || |||||||| ||||||||| ||||| |||||| |||||||||||| ||||    
T  4949203 attgtttttaaccaatgagaagaaagaacaacaaagttgtctcaaaagttgtaccaaaa 4949145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 28676124 - 28676070
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtac 110  Q
    ||||||| |||||||||||||||| |||| || |||||||||| ||| |||||||    
T  28676124 cattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaaaaggttgtac 28676070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 5234441 - 5234361
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| ||||||||| |||||| |||| || ||  ||||||||||||||||| | |||  |||||||||||| |||||||    
T  5234441 cattgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgta-tcaaatggttgttcaaatatcactact 5234361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 8487744 - 8487809
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||| |||||| || | |||||||||||| |||||||||||  |||| | |||||||||||    
T  8487744 ttgaccaataaaaagagagcacaacaaggttgtctcaaaagttgtagcaaaaaaattgttcaaata 8487809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 9032881 - 9032934
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgta 109  Q
    ||||||| ||||||||| |||| | |||| |||||||||||||| |||||||||    
T  9032881 cattgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgta 9032934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 9096038 - 9096110
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||| |||| |||||| |||||||||||  |||||||||||  |||| | |||||||||||    
T  9096038 cattgtttttgaccaataaaaa-aaagaacaacaaggttgtaccaaaagttgtatcaaaataattgttcaaata 9096110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 31275247 - 31275327
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||| ||  |  ||||||||||||||||| | |||  |||||||||||| |||||||    
T  31275247 cattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgta-tcaaatggttgttcaaatatcactact 31275327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 43982998 - 43983071
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||| |||| |||| ||| || |||||  ||||||||||| ||||  ||||||||||||    
T  43982998 cattgtttttgaccaatgagaagagagaacaactagattgtcctaaaagttgtaccaaaatggttgttcaaata 43983071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 46791960 - 46791883
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||| |||| ||||||  ||| |||| ||  |||||||| |||||||||||  |||||||||||||||||| ||||    
T  46791960 attgtttttgatcaatgagtagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatcact 46791883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 53763773 - 53763708
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||||||| || ||||||||| ||||||||| ||||||||||   ||||| ||||| ||||||    
T  53763773 ttgaccaatgagaaaaaagaataataaggttgtcccaaaagttgtttaaaaagggttgtacaaata 53763708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 5208297 - 5208245
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  5208297 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 5208245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 19807358 - 19807310
Alignment:
Q  86 aacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||||||||| ||||| |||||| |||| ||||||||||||| ||||    
T  19807358 aacaaggttgtcccaaaaattgtacaaaaaaagttgttcaaatatcact 19807310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 27001379 - 27001327
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  27001379 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 27001327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 39699404 - 39699356
Alignment:
Q  89 aaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||  |||||||||||  |||||||||||||||||| |||||||    
T  39699404 aaggttgttccaaaagttgtatcaaaagagttgttcaaatatcactact 39699356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 46309092 - 46309012
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| |||||||||||||||| ||||  |||| |||||| |||| ||||||| ||||  |||||  ||||| |||||||    
T  46309092 attgtttttgaccaatgaaaagagagaactacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactact 46309012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 47106012 - 47106064
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  47106012 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 47106064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 51377263 - 51377211
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  51377263 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 51377211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 23258 - 23178
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||||||||||||| |||| |||||| |||| |||||  ||||||| ||| ||||||||||||||||||| ||||||    
T  23258 attgttattgaccaatgagaagagagaatatcaagattgtcctaaaagttatacaaaaagagttgttcaaataatactact 23178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 608631 - 608558
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||| |||| |||| |||||||||||| ||| |||||||| |||| |||||||||||||    
T  608631 cattgtttttgaccaatgagaagagagaacaacaaggttgtcccaacagttgtaccaaaatagttgttcaaata 608558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 7304074 - 7303997
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacact 134  Q
    |||||| ||||||||||| |||| |||| ||  |||||||| |||||||||||  |||||||||||||||||| ||||    
T  7304074 attgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatcact 7303997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 19713095 - 19713168
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| || ||||||||||||| || | |||||||||||| ||||||||||  ||||| |||||||||||||    
T  19713095 cattgttttttaccaatgaaaagagagcacaacaaggttgtcccaaaagttgttgtaaaaaagttgttcaaata 19713168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 34792108 - 34792188
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| |||| | |  | |||||||||||| |||||||| ||| |||||||||||||||||| |||||||    
T  34792108 attgtttttgaccaataaaaaaagaacacaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatcactact 34792188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 1897787 - 1897867
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| |||||||||||||||| |||| ||  |||||||||||||||||||  | ||| || |||||||||| |||||||    
T  1897787 cattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcactact 1897867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 2165270 - 2165217
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgta 109  Q
    ||||||| |||||||||||||||| || | | ||||||||||||||||||||||    
T  2165270 cattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgta 2165217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 2176903 - 2176850
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgta 109  Q
    ||||||| |||||||||||||||| || | | ||||||||||||||||||||||    
T  2176903 cattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgta 2176850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 6997512 - 6997447
Alignment:
Q  64 ttgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||||||||||||| || | |||||||||||| |||||||||||  |||| | |||||||||||    
T  6997512 ttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaata 6997447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 9395307 - 9395234
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||||||||| |||| || | |||||| ||||| |||||||||||  |||| |||||||||||||    
T  9395307 cattgtttttgaccaatgataagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaata 9395234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 10557510 - 10557583
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | |||||| ||||  |||||||||||  |||| |||||||||||||    
T  10557510 cattgtttttgaccaatgaaaagagagtacaacaagattgttccaaaagttgtagcaaaaaagttgttcaaata 10557583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 3660323 - 3660271
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| |||||| |||| |||||||||||||| ||||||||    
T  3660323 cattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgt 3660271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 17442956 - 17443004
Alignment:
Q  89 aaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||||| |||||||||||| |||||||||||||||| | |||||||    
T  17442956 aaggttgtcccaaaagttgtaccaaaagagttgttcaaaaatcactact 17443004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 32135406 - 32135334
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    |||||| |||||||||||||||| || | |||||| |||||  ||||||||||  |||| |||||||||||||    
T  32135406 attgtttttgaccaatgaaaagagagcacaacaagattgtcctaaaagttgtagcaaaaaagttgttcaaata 32135334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 16599392 - 16599323
Alignment:
Q  164 atgataagaaagatgataatattgttttatcttattatatgtttggtgcacacttgttattaacatgata 233  Q
    ||||||||||||||||||  ||| ||| ||  ||| || ||||||||||||||||| |||| ||||||||    
T  16599392 atgataagaaagatgatagcattatttaattctatcatgtgtttggtgcacacttgatattgacatgata 16599323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 22422251 - 22422324
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| ||||| ||||| |||| |||| ||||| |||||  |||||||||||| |||| | |||||||||||    
T  22422251 cattgtttttgactaatgagaagagagaacaacaaagttgtaccaaaagttgtaccaaaataattgttcaaata 22422324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 1803970 - 1804022
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  1803970 cattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 1804022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 2582763 - 2582815
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| |||| ||||||||||| |||| ||  |||||||||||||||||||    
T  2582763 cattgtttttgatcaatgaaaagagagaaaaaagaggttgtcacaaaagttgt 2582815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 145149 - 145229
Alignment:
Q  57 attgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||| ||||||||| | |||| |  | |||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  145149 attgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactact 145229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 1789 - 1736
Alignment:
Q  84 ataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    |||||||| ||||| |||||||||||| |||||||||||||||||| |||||||    
T  1789 ataacaagattgtcccaaaagttgtaccaaaagagttgttcaaatatcactact 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 17139 - 17192
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgta 109  Q
    ||||||| |||||||||||||||| || | | ||||||||||||||||||||||    
T  17139 cattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgta 17192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 3044 - 3117
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaata 129  Q
    ||||||| |||||||||||||||| || | || || |||||| |||||||||||  |||| |||||||||||||    
T  3044 cattgtttttgaccaatgaaaagagagcacaataaagttgtcccaaaagttgtagcaaaaaagttgttcaaata 3117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 1013 - 1077
Alignment:
Q  58 ttgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgt 122  Q
    ||||| |||||||||||||||| |||| ||||| ||| || |||||||||||| |||| ||||||    
T  1013 ttgtttttgaccaatgaaaagagagaacaacaaagttatctcaaaagttgtaccaaaatagttgt 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 11293 - 11345
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| |||||||||||||||| |||| ||  |||||||||||||||||||    
T  11293 cattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt 11345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 15158 - 15079
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| || ||||||||||| | |||| || ||| ||||||||||||||||||  ||| ||||||||||||| |||||||    
T  15158 cattgtttttaaccaatgaaaaaagagaaaaagaag-ttgtcacaaaagttgtac-caaatagttgttcaaatatcactact 15079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 18105 - 18184
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactact 137  Q
    ||||||| || ||||||||||||| |||| || || ||||||| |||||||||| | ||| ||||||||||||| |||||||    
T  18105 cattgtttttaaccaatgaaaagagagaa-aaaaaagttgtcataaaagttgta-tcaaatagttgttcaaatatcactact 18184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 147226 - 147174
Alignment:
Q  56 cattgttattgaccaatgaaaagaaagaataacaaggttgtcacaaaagttgt 108  Q
    ||||||| ||||||||| | |||| |||| |||||||||||||| ||||||||    
T  147226 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 147174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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