View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11563_low_1 (Length: 896)
Name: NF11563_low_1
Description: NF11563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11563_low_1 |
 |  |
|
| [»] scaffold0116 (1 HSPs) |
 |  |  |
|
| [»] scaffold0494 (2 HSPs) |
 |  |  |
|
| [»] scaffold0201 (1 HSPs) |
 |  |  |
|
| [»] scaffold0513 (1 HSPs) |
 |  |  |
|
| [»] scaffold0219 (2 HSPs) |
 |  |  |
|
| [»] scaffold0057 (1 HSPs) |
 |  |  |
|
| [»] scaffold0011 (1 HSPs) |
 |  |  |
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| [»] scaffold0199 (2 HSPs) |
 |  |  |
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| [»] scaffold0169 (2 HSPs) |
 |  |  |
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| [»] scaffold0794 (1 HSPs) |
 |  |  |
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| [»] scaffold0341 (1 HSPs) |
 |  |  |
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| [»] scaffold0184 (1 HSPs) |
 |  |  |
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| [»] scaffold0078 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 367; Significance: 0; HSPs: 66)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 44470070 - 44469575
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||| ||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
44470070 |
aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcagacagtggattctgcataattct |
44469971 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| ||||||||||| || ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
44469970 |
aaacatttccaagccattttttcggtcagtttttacctgtaattgaaccagagcattttcaaaggcaaaataattcatacaagattgaaactcggacata |
44469871 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca |
681 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
44469870 |
atcaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca |
44469771 |
T |
 |
| Q |
682 |
aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata |
781 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44469770 |
aagtgtccataattaaacaactcattacacatcattaaat------taaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata |
44469677 |
T |
 |
| Q |
782 |
atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc |
881 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44469676 |
atatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatc |
44469577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 345 - 883
Target Start/End: Original strand, 50113284 - 50113830
Alignment:
| Q |
345 |
taaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgagga |
444 |
Q |
| |
|
|||||||| ||||||| |||||| |||||| | ||||||||||||| || ||| |||||| |||||| ||||||||||||||||||||| ||| | |
|
|
| T |
50113284 |
taaatgacgtttttgctctcttggcagttaattggtgaggaatttgaatttcggctgtagttaattgccgaggaaaatctcggtagttaactgccgagaa |
50113383 |
T |
 |
| Q |
445 |
agactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaa |
544 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||| |||||||||||||||| ||||| |||| |
|
|
| T |
50113384 |
aaactgattatgcagacagtgggttctgcataattctaaacattttcaatccattttttcggctagtttttaactgtaattaaaccagagcatttccaaa |
50113483 |
T |
 |
| Q |
545 |
ggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaa |
644 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50113484 |
ggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaa |
50113583 |
T |
 |
| Q |
645 |
aattacacaaacgtttgaaattcatcaaaacatt--------------acaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaa |
730 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||| |
|
|
| T |
50113584 |
aattacacaaacgtttgaaattcatcaaaacattacaaagtgtccataacaaagtgtccataattaaacaactcattacacattatt------aaattaa |
50113677 |
T |
 |
| Q |
731 |
atctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatc |
830 |
Q |
| |
|
||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
50113678 |
atccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcgctatc |
50113777 |
T |
 |
| Q |
831 |
gtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50113778 |
gtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
50113830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 319; E-Value: 1e-179
Query Start/End: Original strand, 394 - 883
Target Start/End: Original strand, 9710604 - 9711086
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaa |
493 |
Q |
| |
|
|||| ||||||||||||||||| ||||| |||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9710604 |
tccggctgcagttaactgccgaggaaaacttcgggagttaactgccgaggaaaacgaattatgcagacagtgggttctgcataattctaaacatttccaa |
9710703 |
T |
 |
| Q |
494 |
gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat |
593 |
Q |
| |
|
| ||||||| ||| || ||||||||||||||||||| ||| |||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
9710704 |
gccattttt-cggtcagtttttacctgtaattaaacaagagtatttccaaaggtaaaataattcatacaacattgaaactaggacataaacaagataaat |
9710802 |
T |
 |
| Q |
594 |
acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatga |
693 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
9710803 |
acaatatcttttacaattgtccataattaaatcaaactgacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaaagtgtccataa |
9710902 |
T |
 |
| Q |
694 |
ttaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
793 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9710903 |
ttaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaaagaacatacatatataatatattatctt |
9710996 |
T |
 |
| Q |
794 |
ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9710997 |
tcaccatattccgaaacataaatccgacgtcgctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctc |
9711086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 29352294 - 29352742
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |
|
|
| T |
29352294 |
agttaactgccgaggaaaactgattatgcagacagtggattctacataattctaaacatttccaaaccattttttcggccaatttttacttgtaattaaa |
29352393 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
29352394 |
ccagagcatttgcaaaggcaaaataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaattaa |
29352493 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt |
728 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |
|
|
| T |
29352494 |
accgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaatt |
29352587 |
T |
 |
| Q |
729 |
aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta |
828 |
Q |
| |
|
||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
29352588 |
aaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccg |
29352687 |
T |
 |
| Q |
829 |
tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29352688 |
tcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
29352742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 429 - 883
Target Start/End: Complemental strand, 30910041 - 30909593
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
30910041 |
agttaactgccgaggaaaactgattatgcagacagagggttctgcataattctgaacaattccaagccattttttcggccagtttttacctgtaattaaa |
30909942 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| || |||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30909941 |
ccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaacataagtacaatatcttttacaattgttcataattaaattaa |
30909842 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt |
728 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |
|
|
| T |
30909841 |
accgacgtttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaagtactcattacacatcattaaat------t |
30909748 |
T |
 |
| Q |
729 |
aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta |
828 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30909747 |
aaatccctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccg |
30909648 |
T |
 |
| Q |
829 |
tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30909647 |
tcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctc |
30909593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 401 - 882
Target Start/End: Complemental strand, 20353975 - 20353500
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
20353975 |
gcagttaactgccgaggaaaacttcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
20353876 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||||| ||||||||| ||||||| |||| ||||||||||| |
|
|
| T |
20353875 |
tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagacaaatacaatat |
20353776 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca |
700 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20353775 |
cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaact |
20353676 |
T |
 |
| Q |
701 |
actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat |
800 |
Q |
| |
|
|||||||| |||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
20353675 |
actcattatacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat |
20353582 |
T |
 |
| Q |
801 |
attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct |
882 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20353581 |
attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatct |
20353500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 441 - 883
Target Start/End: Complemental strand, 13633873 - 13633436
Alignment:
| Q |
441 |
aggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccatttt |
540 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||| |||| |
|
|
| T |
13633873 |
aggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccatttttccggccagtttttacctgtaattaaaccagacaatttc |
13633774 |
T |
 |
| Q |
541 |
caaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgaca-tttg |
639 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |
|
|
| T |
13633773 |
caaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatttaaccgacattttg |
13633674 |
T |
 |
| Q |
640 |
gttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctact |
739 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||||| ||||| |
|
|
| T |
13633673 |
gttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcaat------aaattaaatccctact |
13633580 |
T |
 |
| Q |
740 |
tacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaat |
839 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| |
|
|
| T |
13633579 |
tacattcaacgcaattacatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcatcgcgaat |
13633480 |
T |
 |
| Q |
840 |
aagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13633479 |
aagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
13633436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 3944007 - 3944484
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
3944007 |
gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
3944106 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
3944107 |
tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
3944205 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
3944206 |
atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
3944305 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3944306 |
ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
3944399 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3944400 |
atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
3944484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 3993883 - 3993406
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
3993883 |
gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
3993784 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
3993783 |
tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
3993685 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
3993684 |
atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
3993585 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3993584 |
ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
3993491 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3993490 |
atattccgaaacataaatctgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
3993406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 38771662 - 38772140
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
38771662 |
gcagttaactgccgaggaaaacctcgggagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
38771761 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
38771762 |
tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
38771861 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
38771862 |
atcctttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
38771961 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
38771962 |
ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
38772055 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38772056 |
atattccgaaacataaatccgacgtcaccgtcgtcgcggataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
38772140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 483 - 883
Target Start/End: Complemental strand, 37019353 - 37018960
Alignment:
| Q |
483 |
aacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataa |
582 |
Q |
| |
|
||||| |||||| |||||||||| || |||||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| || |||| |
|
|
| T |
37019353 |
aacatctccaagctattttttcggtcaaattttac-tgtaattaaaccagagtattttcaaaggtaaaataattcatacaacattgaaactcggatataa |
37019255 |
T |
 |
| Q |
583 |
acaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaa |
682 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37019254 |
acaagataaatacaatatcttttacaattgtccataattaaattaaaccaacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaa |
37019155 |
T |
 |
| Q |
683 |
agtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataa |
782 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37019154 |
agtgtccataattaaacaactcattacacatcattaaat------taaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataa |
37019061 |
T |
 |
| Q |
783 |
tatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct |
882 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
37019060 |
tatattatcttccaccatattccgaaacataaatcctatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcgtct |
37018961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 8459040 - 8459466
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| ||| ||||||| || ||| ||||||||||||||||||||| | ||||| ||||||||| |
|
|
| T |
8459040 |
attatgcagacagtgggttctgcataattctaaagcatttctaagccattttt-cgaccagtttttacctgtaattaaaccatagcatttccaaaggcaa |
8459138 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| ||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
8459139 |
tataaatcatacaacattgaaacttggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatta |
8459238 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac |
749 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||||| |
|
|
| T |
8459239 |
cacaaacgtttgaaattcatcaaaacgttaaaaagtgtccataattaaacaactcattacacatgatt------aaattaaatccctacttacattcaac |
8459332 |
T |
 |
| Q |
750 |
gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc |
849 |
Q |
| |
|
|||||| ||||| |||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8459333 |
gcaattacatatagaacgaacatacatgtataatatattatcttctaccatattttgaaacataaatccgacgtcgctatcgtcgcgaataagccaagac |
8459432 |
T |
 |
| Q |
850 |
atatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |
|
|
| T |
8459433 |
atatagcttgtcgttttccatgcgtattcatctc |
8459466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 427 - 883
Target Start/End: Original strand, 7966042 - 7966497
Alignment:
| Q |
427 |
gtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaatt |
525 |
Q |
| |
|
||||||||||| |||| || | ||||||||||||||||| |||||||||||||||||| || ||||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
7966042 |
gtagttaactgctgagaaa-attgattatgcagacagtgagttctgcataattctaaagcacttccaagccattttt-cggccagtttttacctgtaatt |
7966139 |
T |
 |
| Q |
526 |
aaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatctttt-acaattgtccataattaaa |
624 |
Q |
| |
|
||||||| ||||| ||||||||| |||| | ||||||| || |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7966140 |
taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatctttttacaattgtccataattaaa |
7966239 |
T |
 |
| Q |
625 |
ttaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacat-cattaaatta |
723 |
Q |
| |
|
| |||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||| | || ||| |
|
|
| T |
7966240 |
tcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattacatttacacatcatt- |
7966338 |
T |
 |
| Q |
724 |
aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgt |
823 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
7966339 |
aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatgtaatatattatcttccaccatattccgaaacataaatctgacgt |
7966438 |
T |
 |
| Q |
824 |
cgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7966439 |
cgctatcgtcgcgaataag-caaggcatatagcttgccgttttccatgcgtattcatctc |
7966497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 429 - 883
Target Start/End: Complemental strand, 51666677 - 51666230
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa |
527 |
Q |
| |
|
||||||||| ||||||| || |||||||| ||||||||||||||||||||||||| |||| |||| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
51666677 |
agttaactgctgaggaaaaca-attatgcacacagtgggttctgcataattctaaagcattctcaagccattttt-cggccaatttttacctgtaattaa |
51666580 |
T |
 |
| Q |
528 |
accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta |
627 |
Q |
| |
|
|||| | ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
51666579 |
accaaagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatattttacaattgtccataattaaatca |
51666480 |
T |
 |
| Q |
628 |
aaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaat |
727 |
Q |
| |
|
||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | || |
|
|
| T |
51666479 |
aaccgacatttggttcaaattacataaaagtttgaaattcatcaaaaagttacaaagtgtccataattaaacaactcattacacatcatt------atat |
51666386 |
T |
 |
| Q |
728 |
taaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgct |
827 |
Q |
| |
|
|||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| |
|
|
| T |
51666385 |
taaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaattcgacgtcgct |
51666286 |
T |
 |
| Q |
828 |
atcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||| |
|
|
| T |
51666285 |
atcgtctttaataagccaaggcatatagcttgtcgtgttccatgtgtattcatctc |
51666230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 399 - 883
Target Start/End: Complemental strand, 1656131 - 1655644
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
||||||||||||| ||| |||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||| | || || || |||| || |
|
|
| T |
1656131 |
ctgcagttaactgtcgagaaaaacctcggtagttaactgccgaggaaaacat-ttatgcagacagtgggttctgcataattgttaagcactttcaagcca |
1656033 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
||||| |||||| ||||||||||||||| || |||| ||||| ||||||||| |||| | ||||||| || ||| | || |||||||||| |||||||| |
|
|
| T |
1656032 |
ttttt-cggccagtttttacctgtaatttaatcagagcatttccaaaggcaatataacttatacaacatttaaatttagtcataaacaagtaaaatacaa |
1655934 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||||||||| ||| |||||||| ||||||||||||||||| | ||||| ||| |||||| ||| |
|
|
| T |
1655933 |
tatcttttacaattgtccataattaaatcaaacggacatttggttcaaaatacacaaaagtttgaaattcatcaaatcgttacatagtatccatgcataa |
1655834 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
793 |
Q |
| |
|
||||| ||||||| |||||| | | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655833 |
acaacacattacaactcattacacatcattaaattaaatcattacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
1655734 |
T |
 |
| Q |
794 |
ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655733 |
ccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgccgttttccatgcgtattcatctc |
1655644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 524 - 883
Target Start/End: Complemental strand, 5082283 - 5081928
Alignment:
| Q |
524 |
ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactc--agacataaacaagataaatacaatatcttttacaattgtccataatt |
621 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
5082283 |
ttaaaccagagcattttcaaaggcaaaataattcatacaagattgaaactctcagacataataaagataagtacaatatcttttacaattgttcataatt |
5082184 |
T |
 |
| Q |
622 |
aaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat |
721 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||| |
|
|
| T |
5082183 |
aaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaagtactccttacacatcattaaat |
5082084 |
T |
 |
| Q |
722 |
taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgac |
821 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5082083 |
------taaatccatatttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgac |
5081990 |
T |
 |
| Q |
822 |
gtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
5081989 |
gtcgccgtcgtcgcgaataagcaaaggcatataccttgtcgttttccatgcgtattcatctc |
5081928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 402 - 883
Target Start/End: Complemental strand, 25040115 - 25039645
Alignment:
| Q |
402 |
cagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattt |
500 |
Q |
| |
|
||||||| || ||| ||||| || |||||||||||||||||||| || |||||||||||||||||||||||||||| | || ||||||| | || |
|
|
| T |
25040115 |
cagttaattgtcgaggaaaaccttggtagttaactgttgaggaaaacat-ttatgcagacagtgggttctgcataattgttaagcatttccca-----tt |
25040022 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| ||||| ||||| ||| |||| | |||||| || |||||||| |||||||||| ||||||||||| |
|
|
| T |
25040021 |
tttcggccagtttttacctgtaatttaaccagaacatttccaaagacaatataacttgtacaacatttaaactcagtcataaacaagtaaaatacaatat |
25039922 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca |
700 |
Q |
| |
|
||||||||||||||||||||||||| |||| || |||||||| ||| |||||||| |||| |||||||||||| | ||||| |||||||||| |||||| |
|
|
| T |
25039921 |
cttttacaattgtccataattaaatcaaactgatatttggttcaaaatacacaaaagtttaaaattcatcaaatcgttacatagtgtccatgcataaaca |
25039822 |
T |
 |
| Q |
701 |
actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat |
800 |
Q |
| |
|
|| |||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
25039821 |
acacattacacatcattaaattaaa------tccctacttacattcaacgcaattgtatatggaacgaacatacacatataatatattatcttccaccat |
25039728 |
T |
 |
| Q |
801 |
attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
25039727 |
attccgaaacataaatccgacgtcgttatcgacgcgaataagccaaggcgtatagcttgccgttttccatgcgtattcatctc |
25039645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 19495122 - 19495562
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
||||||||||||||||||||||||||||| | || |||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||| |||||| || |
|
|
| T |
19495122 |
attatgcagacagtgggttctgcataattgttaagcatttccaagctatttt-tcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa |
19495220 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||||||||||||| || |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| || |
|
|
| T |
19495221 |
tataattcatacaacatttaaactcagtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaata |
19495320 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaa---acattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttac |
742 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| ||||||||| |||||||||| ||||||| |||||| | | |||||||||| |||||||| |
|
|
| T |
19495321 |
cacaaaagtttgaaattcatcaaacgcgtgttacatagtgtccataattaaacaacacattacaagtcattacacatcattaaattaaatccctacttac |
19495420 |
T |
 |
| Q |
743 |
attcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataag |
842 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||| |
|
|
| T |
19495421 |
attcaacgcaattgcatatagaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccaacgtcgctatcgtctcgaataag |
19495520 |
T |
 |
| Q |
843 |
ccaaggcatatagcttgccg-ttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||| |||| ||| |||||||||||| |
|
|
| T |
19495521 |
ccaaggcatatagcttgccgttttttcatacgtattcatctc |
19495562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 399 - 881
Target Start/End: Original strand, 36072400 - 36072879
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| || || |||||||||||||||||||| ||||||||||||||||| ||||| ||| ||| |
|
|
| T |
36072400 |
ctgcagttaactgccgaggaaaacctcggtagttaactgccgaaaaa-actgattatgcagacagtggattctgcataattctaaagcattttcaaatca |
36072498 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
||||| || ||||||||||||| ||||| ||||| ||||||||| |||| | ||||||| | |||||||| |||||||||| |||||||| |
|
|
| T |
36072499 |
ttttt-cgaaatttttttacctgta------ccagaacatttccaaaggcaatataacttatacaacagttaaactcagtcataaacaagtaaaatacaa |
36072591 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
36072592 |
tatcttttacaattgttcataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacattagatagtgtccatgattaa |
36072691 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
793 |
Q |
| |
|
||||| |||||| |||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36072692 |
acaacatattacaactcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
36072791 |
T |
 |
| Q |
794 |
ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc |
881 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
36072792 |
ccaccatattccgaaacataaatccgacgtcgctatcatcttcaattagccaaggcatatagcttgttgttttccatgcgtattcatc |
36072879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 12643291 - 12643714
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
12643291 |
agttaactgctgaggaaaactgattatgcagacagtttgttctgcataattctaaacattttcaagccattttttcggc--------------------- |
12643369 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12643370 |
-cagagcatttccaaaggcaaaataattcatacaagattgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
12643468 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattca---tcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaa |
725 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||| | || | | |||| ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12643469 |
accgacatttggttaaaattaaacaaacgttt--aattaagtgtctata-atta---agtgtccataattaaacaactcattacacatcattaaattaaa |
12643562 |
T |
 |
| Q |
726 |
attaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcg |
825 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
12643563 |
------tccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattctgaaacataaatccgacgtcg |
12643656 |
T |
 |
| Q |
826 |
ctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12643657 |
ccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
12643714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 401 - 725
Target Start/End: Complemental strand, 15051388 - 15051064
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
15051388 |
gcagttaactgccgaggaaaacctcggtagttaactgccggcgaaatctgattatgcagacagtgagttctgcataattctaaacatttccaagccattt |
15051289 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||||| |
|
|
| T |
15051288 |
tttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatat |
15051189 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca |
700 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
15051188 |
cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaact |
15051089 |
T |
 |
| Q |
701 |
actcattacacatcattaaattaaa |
725 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
15051088 |
actcattacacatcattaaattaaa |
15051064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 399 - 883
Target Start/End: Complemental strand, 13178174 - 13177690
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
|||||||||||||| || ||||| |||| ||||||||| ||| || || ||||||| |||||||||||||||||||| |||| || ||||||| || |
|
|
| T |
13178174 |
ctgcagttaactgctgaggaaaacctcgagagttaactgccgagaaaaacat-ttatgca-acagtgggttctgcataattataaagcacttccaagcca |
13178077 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
|||||| | ||| ||||||||||||||| ||||||| ||||| ||||||||| |||| | ||| | || |||||||| |||||||||| ||||| || |
|
|
| T |
13178076 |
tttttt-gaccagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatatta--tttaaactcagtcataaacaagtaaaatataa |
13177980 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||||||||| |||| |
|
|
| T |
13177979 |
tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacatagtgtccatagttaa |
13177880 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaa--tta--aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
793 |
Q |
| |
|
||||| ||||||| |||||| | ||| |||||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
13177879 |
acaacacattacaactcattacacattattaaattaaatccctacttactttcaatgcaattgcatatggaatgaacatacatatataatatattatctt |
13177780 |
T |
 |
| Q |
794 |
ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
13177779 |
ccaccatattccgaaacataaatccgacgtcgctatcgttgcgattaagccaagccatatagcttgccgttttccatgcgtattcatctc |
13177690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 528 - 883
Target Start/End: Original strand, 6558047 - 6558410
Alignment:
| Q |
528 |
accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta |
627 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6558047 |
accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta |
6558146 |
T |
 |
| Q |
628 |
aaccgacatttggttaaaattacacaaacgtttgaaattcatcaaa--------------acattacaaagtgtccatgattaaacaactcattacacat |
713 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
6558147 |
aaccgacatttggttaaaattaaacaaatgtttgaaattcatcaaattaaaccactcaaaacattacaaagtgtccataattaaactactcattacacat |
6558246 |
T |
 |
| Q |
714 |
cattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacata |
813 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
6558247 |
cattaaattaaa------tccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacata |
6558340 |
T |
 |
| Q |
814 |
aatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6558341 |
aatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
6558410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 394 - 691
Target Start/End: Complemental strand, 46886434 - 46886138
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaa |
493 |
Q |
| |
|
|||| ||| |||||| |||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46886434 |
tccggctgtagttaagtgccgaggaaaa-ctcggtagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaaacatttccaa |
46886336 |
T |
 |
| Q |
494 |
gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat |
593 |
Q |
| |
|
| |||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
46886335 |
gccattttttcggctagtttttacctgtaattaaaccagagcctttccaaaggcaaaataattcatacaacattgaaactcggacataaacaagataaat |
46886236 |
T |
 |
| Q |
594 |
acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccat |
691 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
46886235 |
acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcgaaacattacaaagtgtccat |
46886138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 38689962 - 38690417
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
||||||||||||||| | ||||| ||||||||||||||| |||||| || |||||||||||||||| |||| |||||||||||| |||||||||| || |
|
|
| T |
38689962 |
ctgcagttaactgccaaggaaaacctcggtagttaactgccgaggaaaaca-attatgcagacagtggtttctacataattctaaagcatttccaagcca |
38690060 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
||||| |||||| |||||| |||||||||||||||| |||| ||||||||| || ||| |||||| |||| |||||||| |
|
|
| T |
38690061 |
ttttt-cggccagtttttatctgtaattaaaccagaggatttccaaaggcaatat---------------------cagtcataaataagaaaaatacaa |
38690138 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||||||||| || |||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
38690139 |
tatcttttacaattgtccatagttaaatcaaaccgacatttgattcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaa |
38690238 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac |
797 |
Q |
| |
|
||||| ||||||||||||||| |||||| || ||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
38690239 |
acaacacattacacatcattatattaaa------tc-ctacttacattcatcacaattgcatatggaacaaacatacatatataatatattattttccac |
38690331 |
T |
 |
| Q |
798 |
catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38690332 |
catattttgaaacataaatccgacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
38690417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 451 - 882
Target Start/End: Complemental strand, 4518406 - 4517959
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||| ||||| |||| ||||||| |||||| ||||||||||||||||||||| | ||||| ||||||||| |
|
|
| T |
4518406 |
attatggagacagtaggttctgcataattctaaagcattttcaagccattttt-cggccagtttttacctgtaattaaaccaaagcatttccaaaggcaa |
4518308 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
4518307 |
tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatta |
4518208 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattaca--------------aagtgtccatgattaaacaactcattacacatcatt--aaattaaaattaaatc |
733 |
Q |
| |
|
|||||| ||||||||||||||| ||| ||||| |||||||||| |||||||||| ||||||| ||||| | || | || |||| |
|
|
| T |
4518207 |
cacaaaagtttgaaattcatcagaacgttacaaaatgtccataattaagtgtccataattaaacaacacattacaactcattacacatcattatataatc |
4518108 |
T |
 |
| Q |
734 |
tctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtc |
833 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||| ||||| ||| |
|
|
| T |
4518107 |
cctacttacattcatcacaattgcatatggaacgaacatacatatataatatattatttttcaccatattccgaaacataaatccgacgttgctatagtc |
4518008 |
T |
 |
| Q |
834 |
gcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct |
882 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4518007 |
tttaataagccaaggcatatagcttgccattttccatgcgtattcatct |
4517959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 451 - 882
Target Start/End: Complemental strand, 5141851 - 5141435
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
|||||||||||||||||||||||||||||| | || || ||||||| ||| || |||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
5141851 |
attatgcagacagtgggttctgcataattcaa-------cctagccattttt-cggtcagtttttacctgtaattaaagcagaacatttccaaaggcaat |
5141760 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||| ||||||||| || | |||||| ||||||||||| || |||| ||||||||||| |||||||||||||||| ||||||||| |||| |||||| |
|
|
| T |
5141759 |
ataactcatacaacatttatactcaggcataaacaagaaaattaca-tatcttttacagttgtccataattaaatcaaaccgacaaggggttcgaattac |
5141661 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacg |
750 |
Q |
| |
|
| || ||||||||||||| ||||| ||| | |||||| || |||||||||| ||||| | ||| |||||||||| |||||||| |||||| ||| |
|
|
| T |
5141660 |
tcgaatgtttgaaattcattaaaacgttaaatagtgtcaataattaaacaacacattatatatcgttaaattaaa------tctctactgacattctacg |
5141567 |
T |
 |
| Q |
751 |
caattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggca |
850 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
5141566 |
caattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaacatacatctgacgtcgctatcgtcgcgaataagccaacgca |
5141467 |
T |
 |
| Q |
851 |
tatagcttgccgttttccatgcgtattcatct |
882 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
5141466 |
tatagcttgccgttttccatgcgtattcatct |
5141435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 464 - 883
Target Start/End: Complemental strand, 46979235 - 46978798
Alignment:
| Q |
464 |
tgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcataca |
562 |
Q |
| |
|
||||||||||||||||||||| ||||| |||| |||||| ||| || ||||||| |||||||||| |||| ||||| ||||||||| |||| ||||||| |
|
|
| T |
46979235 |
tgggttctgcataattctaaaacattttcaagctattttt-cggtcagtttttacttgtaattaaatcagagcatttccaaaggcaatataaatcataca |
46979137 |
T |
 |
| Q |
563 |
acgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttga |
662 |
Q |
| |
|
|| ||||||||| | ||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||| |||||| |
|
|
| T |
46979136 |
acattgaaactcggtcataaacaagaaaaatagaatatcttttacaattgtccataattaaatcaaacagacatttgattcaaattacacaaaagtttga |
46979037 |
T |
 |
| Q |
663 |
aattcatcaaaacattacaaagtgt--------------ccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacat |
744 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||||| ||||||| |||||| | | | |||||||| |||||||||| |
|
|
| T |
46979036 |
aattcatcaaaacattacaaagtgtccataattaagtgtccataattaaacaacacattacaattcattacacatcattatattaaatccctacttacat |
46978937 |
T |
 |
| Q |
745 |
tcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcc |
844 |
Q |
| |
|
||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
46978936 |
tcatcacaattgcattaggaacgaacatacatatataatatattattttccaccatatttcgaaacataaatccgacgtcgctatcgtctttaataagcc |
46978837 |
T |
 |
| Q |
845 |
aaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
46978836 |
aaggcatatagcttgtcgttttccatgtgtattcatctc |
46978798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 118 - 315
Target Start/End: Original strand, 50113033 - 50113229
Alignment:
| Q |
118 |
actttagagtaaagcaatgtgggagggttatgctttataacttacttttgttgttgtttgtgagtcataggatccattaccttacgcgtgactttggact |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
50113033 |
actttagagtaaagcaatgtgggagggttatgctttataacttacttttgttgttgtttgtgagtcataggatccattaccttacgcgtgactttgg-ct |
50113131 |
T |
 |
| Q |
218 |
taggaggaggatcacgctagtctgttattgtgggccataccatccctgtggtgtgtgtggacccaccttgcatttcactcatttttcttatggttgtt |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
50113132 |
taggaggaggatcacgctagtctgttattgtgggccataccatccctgtggtgtgtgtggacccaccttgcatttcactcatttttgttatggttgtt |
50113229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 571 - 883
Target Start/End: Original strand, 33168106 - 33168422
Alignment:
| Q |
571 |
actcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatc |
670 |
Q |
| |
|
|||||| |||||||||| ||||| | ||||||||||| |||||||||||||||| |||||||||||| ||| ||| ||||| || |||||||| ||||| |
|
|
| T |
33168106 |
actcagtcataaacaaggaaaatatattatcttttacagttgtccataattaaatcaaaccgacatttagttcaaagtacacgaaagtttgaaaatcatc |
33168205 |
T |
 |
| Q |
671 |
aaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaac |
766 |
Q |
| |
|
||||| ||||| ||||||||| |||||||||| ||||||| |||||| || | |||||||||| ||||||||| ||||||||||| |||||||||| |
|
|
| T |
33168206 |
aaaacgttacatagtgtccataattaaacaacacattacaactcattacatatcattaaattaaatccctacttacactcaacgcaattacatatggaac |
33168305 |
T |
 |
| Q |
767 |
gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt |
866 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||| ||||| |
|
|
| T |
33168306 |
gaacatacatatataatatattattttccaccatattccgaaacataaatctgacgtcgctatcgtctaaaataagtcaaggcatatagcttgttgtttt |
33168405 |
T |
 |
| Q |
867 |
ccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
33168406 |
ccatgcgtattcatctc |
33168422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 451 - 671
Target Start/End: Complemental strand, 52805549 - 52805330
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||||||| ||||||| ||| || |||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
52805549 |
attatgcagacagtgggctctgcatgattctaaacatttccaagccattttt-cggtcagcttttacctgtaattaaaccagagtatttccaaaggcaaa |
52805451 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||||||||| ||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
52805450 |
ataattcatataacattgaaactctgacataaataagaaaaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattac |
52805351 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
52805350 |
acaaacgtttgaaattcatca |
52805330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 403 - 671
Target Start/End: Complemental strand, 471108 - 470840
Alignment:
| Q |
403 |
agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatttt |
501 |
Q |
| |
|
||||||||||||| |||| |||||| |||||| |||||| |||||||||||| ||||| | ||||||| |||||||| |||||||| ||| |||| |
|
|
| T |
471108 |
agttaactgccgagaaaaacttcggtatgtaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaggtc-tttt |
471010 |
T |
 |
| Q |
502 |
ttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatc |
601 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
471009 |
ttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataagtacaatatc |
470910 |
T |
 |
| Q |
602 |
ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||| ||||| ||||||| ||| |||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
470909 |
ttttaccattgttcataatttaatcaaaccgacatttggttcaaattatacaaacgtttgaaattcatca |
470840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 448 - 671
Target Start/End: Original strand, 94477 - 94700
Alignment:
| Q |
448 |
ctgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaagg |
546 |
Q |
| |
|
|||||||||||| || || | ||||||| |||||||| |||||||||| | |||||| | ||| |||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
94477 |
ctgattatgcaggcattgagctctgcatcattctaaaacatttccaaggcttttttt-gaccagtttttacctgtaattaaagcagagcatttcgaaagg |
94575 |
T |
 |
| Q |
547 |
caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa |
646 |
Q |
| |
|
||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
94576 |
caaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaa |
94675 |
T |
 |
| Q |
647 |
ttacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
94676 |
ttacacaaacgtttgaaattcatca |
94700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 455 - 671
Target Start/End: Original strand, 31780054 - 31780270
Alignment:
| Q |
455 |
tgcagacagtgggttctgcataattctaaac-atttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaata |
553 |
Q |
| |
|
||||| ||||| | ||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||| | |
|
|
| T |
31780054 |
tgcaggcagtgagctctgcatcattctaaaatatttccaag-cattttttcggccaatttttacctgtaattaagccagagcatttcgaatggcaaaaca |
31780152 |
T |
 |
| Q |
554 |
attcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacaca |
653 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| |
|
|
| T |
31780153 |
attcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacattaggttcaaattacaca |
31780252 |
T |
 |
| Q |
654 |
aacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
31780253 |
aacgtttgaaattcatca |
31780270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 482 - 671
Target Start/End: Complemental strand, 22527653 - 22527465
Alignment:
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| | |||||||||| | ||||||||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||| |||||| |
|
|
| T |
22527653 |
aaacatttccaagcc-ttttttcggctagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacata |
22527555 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
22527554 |
aacaagataaatacaatatgttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca |
22527465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 451 - 672
Target Start/End: Complemental strand, 22346034 - 22345818
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| ||||||| || ||| ||||||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
22346034 |
attatgcagacagtgggttctgcataattctaatgcatttccaagccattttt-cgaccagtttttacctgtaattaagccagagcatttccaaaggcaa |
22345936 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| ||||||||| ||||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
22345935 |
tataaatcatacaacattgaaactcggac-----caagaaaaatacaatatcttttacaattgtccataagtaaatcaaaccgacatttggttcaaatta |
22345841 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaa |
672 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
22345840 |
cacaaacgtttgaaattcatcaa |
22345818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 382 - 573
Target Start/End: Complemental strand, 23359408 - 23359217
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||| |||||||||||| |||| ||||| ||||||||| ||||| |||||| ||||||||| ||||||| ||||||||||||||| |
|
|
| T |
23359408 |
aggaatttgaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgaggaaaactgattatacagacagcaagttctgcataattct |
23359309 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaact |
573 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
23359308 |
aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaact |
23359217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #38
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 482 - 672
Target Start/End: Original strand, 19521711 - 19521900
Alignment:
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| |||||||| || || |||||||||| ||||||| |||| ||||| ||||||||||||||||||||| | ||||||||| |||||| |
|
|
| T |
19521711 |
aaacatttccaagccatttttt-ggtcactttttacctgcaattaaagcagagcatttcgaaaggcaaaataattcatacagcattgaaactcggacata |
19521809 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaa |
672 |
Q |
| |
|
||||||| |||||| |||||||||||||||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
19521810 |
aacaagaaaaatactatatcttttacaattgtctataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattcatcaa |
19521900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #39
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 451 - 667
Target Start/End: Complemental strand, 21144621 - 21144405
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
|||||| |||||||| | |||| || |||||||| |||||||||| ||||||| |||||| |||||| |||||| |||| |||| |||| |||||||| |
|
|
| T |
21144621 |
attatgaagacagtgagctctgtatgattctaaaacatttccaagccattttt-cggccagtttttatctgtaagtaaagcagagaatttcgaaaggcaa |
21144523 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||| ||| |||||||||||| |||||| |
|
|
| T |
21144522 |
aataattcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaattgtctataattaaatcaaatcgacatttggttcaaatta |
21144423 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattc |
667 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
21144422 |
cacaaacgtttgaaattc |
21144405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #40
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 16281828 - 16281999
Alignment:
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
|||||||| || ||||||| |||||||||| |||| ||||| ||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||| |
|
|
| T |
16281828 |
tttttcggtcagtttttac-tgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattaaaactcggacataaacaagaaaaatacaat |
16281926 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
16281927 |
attttttacaattgtccataattaaattaaaccgacatctggttcaaattacacaaacgtttgaaattcatca |
16281999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #41
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 50617333 - 50617503
Alignment:
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat-acaa |
597 |
Q |
| |
|
||||||||||| |||||||||||||||||| || | |||||| ||||||||||||||||||||||| ||||||||| ||||||||||| | ||| |||| |
|
|
| T |
50617333 |
tttttcggccagtttttacctgtaattaaagcacaacattttgaaaggcaaaataattcatacaacattgaaactctgacataaacaaaaaaaaacacaa |
50617432 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca |
668 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
50617433 |
tattttttacaattgtccatatttaaattaaaccgacatttggttcaaattacacaaacgtttgaaattca |
50617503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #42
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 382 - 500
Target Start/End: Original strand, 6557929 - 6558046
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| | || ||||||||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||| |||| ||||||||||||| |
|
|
| T |
6557929 |
aggaatttgaaattcggctgcagttaactgccgaggaaaatctcggtagttaactgccgagaaaaactgattatgcagacaatggg-tctgcataattct |
6558027 |
T |
 |
| Q |
482 |
aaacatttccaagtcattt |
500 |
Q |
| |
|
|||||||| |||| ||||| |
|
|
| T |
6558028 |
aaacattttcaagccattt |
6558046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #43
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 633 - 773
Target Start/End: Original strand, 1179878 - 1180022
Alignment:
| Q |
633 |
acatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaatt |
728 |
Q |
| |
|
|||||| ||||||||||||| || ||||||||||||||||||||||| | |||||||| |||||||||| ||||||| |||||||| | ||||| |
|
|
| T |
1179878 |
acatttcgttaaaattacacgaatgtttgaaattcatcaaaacattaaagagtgtccacaattaaacaacacattacaacacattaaatattgttaaatt |
1179977 |
T |
 |
| Q |
729 |
aaatctctacttacattcaacgcaattgcatatggaacgaacata |
773 |
Q |
| |
|
|||| | | || |||||| ||||| ||||| || ||||||||||| |
|
|
| T |
1179978 |
aaatatttgctgacattctacgcagttgcagatagaacgaacata |
1180022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #44
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 399 - 484
Target Start/End: Original strand, 29261445 - 29261529
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa |
484 |
Q |
| |
|
||||| ||||||||||||||||| ||| |||||||||||| || ||| ||| |||||| |||||| |||||||||||||||||||| |
|
|
| T |
29261445 |
ctgcaattaactgccgaagaaaacctcagtagttaactgtcga-gaaaactaattatggagacagcgggttctgcataattctaaa |
29261529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 354 - 437
Target Start/End: Original strand, 52802116 - 52802199
Alignment:
| Q |
354 |
tttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||| | ||||||| | | ||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
52802116 |
tttttgccctctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactg |
52802199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 499 - 651
Target Start/End: Complemental strand, 47715029 - 47714877
Alignment:
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| | ||||||||| ||||| ||||||| ||||| || | ||| || | || |||||| || | |||||| ||||||||| | ||||||| | |
|
|
| T |
47715029 |
tttttcggctagtttttacctataattcaaccagagcatttccagaaacaatattagtcgtacaacatttatactcagtcataaacaacaaaaatacatt |
47714930 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattaca |
651 |
Q |
| |
|
|||||||| | ||||||||||| ||| || ||||||||| ||||||||||| |
|
|
| T |
47714929 |
atcttttatagctgtccataattgaatcaatccgacatttcattaaaattaca |
47714877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 6562220 - 6562165
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
6562220 |
aggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactg |
6562165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 395 - 438
Target Start/End: Complemental strand, 41804079 - 41804036
Alignment:
| Q |
395 |
ccgactgcagttaactgccgaagaaaatctcggtagttaactgt |
438 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
41804079 |
ccgactgcagttaactgccgaggaaaacctcggtagttaactgt |
41804036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 437
Target Start/End: Original strand, 44336251 - 44336318
Alignment:
| Q |
370 |
agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||| ||| ||||||| ||| | || ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
44336251 |
agttaactgtcgaggaattagaaattcggctgcagttaactgccgaggaaaacctcggtagttaactg |
44336318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 11183212 - 11183261
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgagg |
443 |
Q |
| |
|
|||| ||||||||||||||||| ||||| |||||||||||||||| |||| |
|
|
| T |
11183212 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactgtcgagg |
11183261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 8460155 - 8460101
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||| || | ||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
8460155 |
aggaatttgaaatcgg-ctgcagttaactgccaaggaaaatctcggtagttaactg |
8460101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 13636169 - 13636126
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
13636169 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
13636126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 15047296 - 15047351
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
15047296 |
aggaatttgaaatccggctgcagttaactgccgaggaattcctcggtagttaactg |
15047351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 30910074 - 30910023
Alignment:
| Q |
370 |
agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaa |
421 |
Q |
| |
|
||||||| ||| ||||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
30910074 |
agttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaa |
30910023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 16270067 - 16270029
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
16270067 |
ctgcagttaactgccgaagaaaacctcggcagttaactg |
16270029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 381 - 459
Target Start/End: Original strand, 19521622 - 19521700
Alignment:
| Q |
381 |
aaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcag |
459 |
Q |
| |
|
|||||||| ||| |||| ||||||||| ||||| | || |||||||||||||||||| |||||| || ||||||||| |
|
|
| T |
19521622 |
aaggaattagaaatccggctgcagttacctgccaaggataatctcggtagttaactgccgaggaaaacaaattatgcag |
19521700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 579 - 677
Target Start/End: Complemental strand, 25234106 - 25234008
Alignment:
| Q |
579 |
ataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacat |
677 |
Q |
| |
|
|||||||||| |||||| |||||| ||||||| || ||||||||||| | |||||| |||||||| |||| || |||||||||||| | |||||| |
|
|
| T |
25234106 |
ataaacaagaacaatacataatctttcacaattgatcaaaattaaattaattcaacatttcgttaaaataacacgaatgtttgaaattcaactaaacat |
25234008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 605
Target Start/End: Original strand, 29261531 - 29261601
Alignment:
| Q |
535 |
cattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatctttt |
605 |
Q |
| |
|
|||||||||||| || |||| | ||||||| || ||| |||| |||||||||| |||||||||||||||| |
|
|
| T |
29261531 |
cattttcaaaggtaatataacttatacaacatttaaattcagtcataaacaagtaaaatacaatatctttt |
29261601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 253409 - 253356
Alignment:
| Q |
310 |
gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccc |
362 |
Q |
| |
|
|||||||||||||||| |||| || ||||||| |||||||||||||||||||| |
|
|
| T |
253409 |
gttgttcccacattacgtaaggctgtgccacacgagtaaatgacatttttgccc |
253356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 20114546 - 20114599
Alignment:
| Q |
310 |
gttgttcccacattacataa-gctcggccacaccagtaaatgacatttttgccc |
362 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||||||| ||||||||| |
|
|
| T |
20114546 |
gttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgccc |
20114599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 26633559 - 26633596
Alignment:
| Q |
400 |
tgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
26633559 |
tgcagttaactgccgaggaaaacctcggtagttaactg |
26633596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 26944420 - 26944473
Alignment:
| Q |
310 |
gttgttcccacattacataa-gctcggccacaccagtaaatgacatttttgccc |
362 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||||||| ||||||||| |
|
|
| T |
26944420 |
gttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgccc |
26944473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 32161424 - 32161371
Alignment:
| Q |
310 |
gttgttcccacattacataa-gctcggccacaccagtaaatgacatttttgccc |
362 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||||||| ||||||||| |
|
|
| T |
32161424 |
gttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgccc |
32161371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 422
Target Start/End: Original strand, 41453839 - 41453892
Alignment:
| Q |
369 |
tagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaat |
422 |
Q |
| |
|
|||||||| | | ||||||||||| |||| ||||||||||||||||| |||||| |
|
|
| T |
41453839 |
tagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaat |
41453892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 44596802 - 44596855
Alignment:
| Q |
310 |
gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccc |
362 |
Q |
| |
|
||||||||||||||||||||| || ||||||| |||||||||| ||||||||| |
|
|
| T |
44596802 |
gttgttcccacattacataagactgtgccacacgagtaaatgacgtttttgccc |
44596855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 50117886 - 50117853
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaa |
434 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
50117886 |
gcagttaactgccgaggaaaatctcggtagttaa |
50117853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0116 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: scaffold0116
Description:
Target: scaffold0116; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 16014 - 15519
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16014 |
aggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaacttccgaggaaaactgattatgcagacagtgagttctgcataattct |
15915 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||| ||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
15914 |
aaacatttctaagccatttgttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata |
15815 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca |
681 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
15814 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttagttaaaattaaacaaacgtttgaaattcatcaaaacattaca |
15715 |
T |
 |
| Q |
682 |
aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata |
781 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15714 |
aagtgtccataattaaacaactcattacacatcattaaat------taaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata |
15621 |
T |
 |
| Q |
782 |
atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc |
881 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15620 |
atatattattttccaccatattccgaaacataaatctgacgtccccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatacgtattcatc |
15521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 348; Significance: 0; HSPs: 32)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 429 - 883
Target Start/End: Complemental strand, 47743001 - 47742553
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |
|
|
| T |
47743001 |
agttaactgtcgaggaaaactgattatgcagacagtgggttctgcataattctaaacatttccaagccatttttttggccagtttttacctgtaattaaa |
47742902 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
47742901 |
ccagagcattttcaaaggcaaaataattcatacaacattgaaacatggacaaaaacaagataaatgcaatatcttttacaattgtccataattaaattaa |
47742802 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt |
728 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
47742801 |
accaacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcattaaat------t |
47742708 |
T |
 |
| Q |
729 |
aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta |
828 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
47742707 |
aaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgcca |
47742608 |
T |
 |
| Q |
829 |
tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
47742607 |
tcgtcgcgaataagccaaggcatatagcttgtcgttttccatgcgtattcatctc |
47742553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 424 - 883
Target Start/End: Complemental strand, 15070368 - 15069914
Alignment:
| Q |
424 |
tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa |
523 |
Q |
| |
|
|||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
15070368 |
tcggcagttaactgcngaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttttcggccagtttttacctgtaa |
15070269 |
T |
 |
| Q |
524 |
ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa |
623 |
Q |
| |
|
||||||||| ||||| ||||||| ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15070268 |
ataaaccagagcatttccaaaggctaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaa |
15070169 |
T |
 |
| Q |
624 |
attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt |
722 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
15070168 |
attaaaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt----- |
15070074 |
T |
 |
| Q |
723 |
aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg |
822 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
15070073 |
-aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg |
15069975 |
T |
 |
| Q |
823 |
tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15069974 |
tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
15069914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 603812 - 604288
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| || |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
603812 |
gcagttaactgccgaggaaaaccttggtagtaaactgccaaggaaatctgattatgcagacagtgggttctgcataattctaagtatttccaagccattt |
603911 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||||| |||||| |||||||||||||||| |
|
|
| T |
603912 |
tttcggccagtttttacctgtaattaaaccagaacatttccaaaggtaaaataattcatacaagattgaaactcgaacataatgaagataaatacaatat |
604011 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca |
700 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
604012 |
cttttacaattgttcataattaaattaaatcgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaact |
604111 |
T |
 |
| Q |
701 |
actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat |
800 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
604112 |
actcattacacatcatt------aaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatattatcttccaccat |
604205 |
T |
 |
| Q |
801 |
attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
604206 |
attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
604288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 319; E-Value: 1e-179
Query Start/End: Original strand, 447 - 883
Target Start/End: Complemental strand, 18109788 - 18109357
Alignment:
| Q |
447 |
actgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaagg |
546 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||| |||||| |
|
|
| T |
18109788 |
actgataatgcagacagtgggttctgcataattctaaacatttccaaaccattttttcggccagtttttatctgtaattaaaccagagcatttccaaagg |
18109689 |
T |
 |
| Q |
547 |
caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgaca-tttggttaaa |
645 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
18109688 |
caaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaaaccgacattttggttaaa |
18109589 |
T |
 |
| Q |
646 |
attacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacatt |
745 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
18109588 |
attaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacatt |
18109495 |
T |
 |
| Q |
746 |
caacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcca |
845 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
18109494 |
caacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaa |
18109395 |
T |
 |
| Q |
846 |
aggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18109394 |
aggcatatagcttgccgttttccatgcgtattcatctc |
18109357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 395 - 878
Target Start/End: Original strand, 34622526 - 34623002
Alignment:
| Q |
395 |
ccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaa |
493 |
Q |
| |
|
||||||||||||||||| ||| |||| ||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
34622526 |
ccgactgcagttaactgtcgaggaaatcctcggtagttaacagccaaggaaaaca-attatgcagacagtgggttctgcataattctaaagcatttccaa |
34622624 |
T |
 |
| Q |
494 |
gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat |
593 |
Q |
| |
|
| ||||||| ||| || ||||||| ||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | |||||| |||| |||| |
|
|
| T |
34622625 |
gccattttt-cggtcagtttttacatgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaataagaaaaat |
34622723 |
T |
 |
| Q |
594 |
acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatga |
693 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
34622724 |
acaatatattttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataa |
34622823 |
T |
 |
| Q |
694 |
ttaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
793 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
34622824 |
ttaaacaactcattacacatcattaaattaaact------tctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatctt |
34622917 |
T |
 |
| Q |
794 |
ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc |
878 |
Q |
| |
|
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34622918 |
ccatcatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc |
34623002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 424 - 883
Target Start/End: Complemental strand, 42503856 - 42503402
Alignment:
| Q |
424 |
tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa |
523 |
Q |
| |
|
|||| |||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
42503856 |
tcggcagttaactgtcgaggaaaactgattatgcagacagtgagttctgcataattctagacatttccaagctattttttcggccagtttttacctgtaa |
42503757 |
T |
 |
| Q |
524 |
ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa |
623 |
Q |
| |
|
|||||||||| ||| | ||||||| ||||||||||| ||| ||||||||| | ||||| ||||||||||||||||||||||| |||||| ||| ||||| |
|
|
| T |
42503756 |
ttaaaccagagcatctccaaaggctaaataattcatgcaagattgaaactcggtcataatcaagataaatacaatatcttttataattgttcatgattaa |
42503657 |
T |
 |
| Q |
624 |
attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt |
722 |
Q |
| |
|
|||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
42503656 |
attaaaccaacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt----- |
42503562 |
T |
 |
| Q |
723 |
aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg |
822 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
42503561 |
-aaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg |
42503463 |
T |
 |
| Q |
823 |
tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
42503462 |
tcgccgtcgtcgcgaataagcaaaggcatgtagcttgccgttttccatgcgtattcatctc |
42503402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 30791048 - 30790570
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
|||||||||| |||| ||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
30791048 |
gcagttaactaccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
30790949 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||| ||| |
|
|
| T |
30790948 |
tttcggccattttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatagaat |
30790849 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30790848 |
atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
30790749 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
30790748 |
ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
30790655 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30790654 |
atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctc |
30790570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 45767901 - 45767424
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
45767901 |
gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
45767802 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
45767801 |
tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
45767703 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
45767702 |
atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
45767603 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||||||||||| || |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
45767602 |
ctactcattacacatcattaaattaaa------tccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
45767509 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45767508 |
atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
45767424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 449 - 883
Target Start/End: Original strand, 43619760 - 43620189
Alignment:
| Q |
449 |
tgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggca |
548 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||| | |
|
|
| T |
43619760 |
tgattatgcagacagcaggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcattc-caaaggta |
43619858 |
T |
 |
| Q |
549 |
aaataattcatac--aacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa |
646 |
Q |
| |
|
| |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
43619859 |
atataattcatatgtatgattgaaactcagacataatgaagataaatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaa |
43619958 |
T |
 |
| Q |
647 |
ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc |
746 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
43619959 |
ttaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattc |
43620052 |
T |
 |
| Q |
747 |
aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa |
846 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
43620053 |
aatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa |
43620152 |
T |
 |
| Q |
847 |
ggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43620153 |
ggcatatagcttgccgttttccatgcgtattcatctc |
43620189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 19044308 - 19044815
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| ||||| |||||||||||||| |||||| || |||||||||| |||||||| ||||||||||| |
|
|
| T |
19044308 |
aggaatttgaaa-ccgactgcagttaattgccgaggaaaacttcggtagttaactgccgaggaaaaca-attatgcagatagtgggttttgcataattct |
19044405 |
T |
 |
| Q |
482 |
aaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat |
580 |
Q |
| |
|
|| |||||||||| ||||||| |||| | ||||||||||||||||||||||| |||| ||||||||| |||| ||||||||| |||||| | | ||| |
|
|
| T |
19044406 |
aatgcatttccaagccattttt-cggctagtttttacctgtaattaaaccagagaatttccaaaggcaatataaatcatacaacattgaaattgggtcat |
19044504 |
T |
 |
| Q |
581 |
aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattac |
680 |
Q |
| |
|
|| ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19044505 |
aaccaagaaaaatacaatatcttttacagttgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacattac |
19044604 |
T |
 |
| Q |
681 |
a--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaac |
766 |
Q |
| |
|
| |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19044605 |
aaagtgtccataattaagtgtccataattaaacaaatcattacacatcatt------aaattaaatctctacttacattcaacgcaattgcatatggaac |
19044698 |
T |
 |
| Q |
767 |
gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt |
866 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19044699 |
gaacatacatatataatatattatcttccaccatatttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttgccgtttt |
19044798 |
T |
 |
| Q |
867 |
ccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| ||||| |||| |
|
|
| T |
19044799 |
ccatgcatattcttctc |
19044815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 20710328 - 20709821
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| ||||| |||||||||||||| |||||| || |||||||||| |||||||| ||||||||||| |
|
|
| T |
20710328 |
aggaatttgaaa-ccgactgcagttaattgccgaggaaaacttcggtagttaactgccgaggaaaaca-attatgcagatagtgggttttgcataattct |
20710231 |
T |
 |
| Q |
482 |
aaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat |
580 |
Q |
| |
|
|| |||||||||| ||||||| |||| | ||||||||||||||||||||||| |||| ||||||||| |||| ||||||||| |||||| | | ||| |
|
|
| T |
20710230 |
aatgcatttccaagccattttt-cggctagtttttacctgtaattaaaccagagaatttccaaaggcaatataaatcatacaacattgaaattgggtcat |
20710132 |
T |
 |
| Q |
581 |
aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattac |
680 |
Q |
| |
|
|| ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20710131 |
aaccaagaaaaatacaatatcttttacagttgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacattac |
20710032 |
T |
 |
| Q |
681 |
aaagtgt--------------ccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaac |
766 |
Q |
| |
|
||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20710031 |
aaagtgtccataattaagtgtccataattaaacaaatcattacacatcatt------aaattaaatctctacttacattcaacgcaattgcatatggaac |
20709938 |
T |
 |
| Q |
767 |
gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt |
866 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
20709937 |
gaacatacatatataatatattatcttccaccatatttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttgccgtttt |
20709838 |
T |
 |
| Q |
867 |
ccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| ||||| |||| |
|
|
| T |
20709837 |
ccatgcatattcttctc |
20709821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 399 - 882
Target Start/End: Original strand, 10705279 - 10705765
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
||||||||||||||||| |||| || || ||||||||| ||| || |||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
10705279 |
ctgcagttaactgccgagaaaaaccttgggagttaactgccgagaaa-actgattatgcagacagtgggttctgcataattctaaagcacttccaagtca |
10705377 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
||||| ||| || ||||||| ||||||| ||||| | ||||| |||||||| |||| | ||||||| || |||||||| |||||||||| |||||||| |
|
|
| T |
10705378 |
ttttt-cggtcaatttttacatgtaatttaaccaaagcatttctaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaa |
10705476 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||| |||| ||||||||||||| ||||| ||||||||| ||||| |
|
|
| T |
10705477 |
tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttaaaattcatcaaaatgttacatagtgtccataattaa |
10705576 |
T |
 |
| Q |
698 |
acaactcattacacatcatt--aaatta--aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
793 |
Q |
| |
|
|||| ||||||| ||||| | || | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
10705577 |
acaatacattacaactcattacacatcaataaattaaatctctacttacattcaacgcaattgcatatagaacgaacatacatatataatatatcatctt |
10705676 |
T |
 |
| Q |
794 |
ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct |
882 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10705677 |
ccaccatattctgaaacataaatccgacgtcgctatcgtcttcaattagccaaggcatatagcttgtcgttttccatgcgtattcatct |
10705765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 355 - 666
Target Start/End: Original strand, 29592530 - 29592841
Alignment:
| Q |
355 |
ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgatta |
454 |
Q |
| |
|
|||||||| |||| ||||||| ||| ||||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||| || ||| |||||||| |
|
|
| T |
29592530 |
ttttgcccccttggcagttaactgtcgaggaatttgaaatccgactgcaattaactgccgatgaaaacttcggtagttaactgtcgaagaaaactgatta |
29592629 |
T |
 |
| Q |
455 |
tgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataa |
554 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
29592630 |
tgcagacagtggattctgcataattttaaacatttccaaaccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggaaaaataa |
29592729 |
T |
 |
| Q |
555 |
ttcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaa |
654 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
29592730 |
ttcatacaagattgaaactcggacataaacaagataaatacaatattttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaa |
29592829 |
T |
 |
| Q |
655 |
acgtttgaaatt |
666 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
29592830 |
acttttgaaatt |
29592841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 429 - 679
Target Start/End: Complemental strand, 40928965 - 40928715
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
40928965 |
agttaactgccgaggaaaactgattatgcagacagtgagttctgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaa |
40928866 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
40928865 |
ccagagcatttccaaaggcaaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaa |
40928766 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacatta |
679 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
40928765 |
accgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacatta |
40928715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 451 - 880
Target Start/End: Original strand, 12111283 - 12111729
Alignment:
| Q |
451 |
attatgcagacag-tgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggca |
548 |
Q |
| |
|
|||||||||| || |||||| |||||||||||||| ||||| ||||| |||||| | | || ||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
12111283 |
attatgcagataggtgggttatgcataattctaaagcattttcaagttattttt-cagtcagtttttacttgtaattaaaccagagcattttcaaaggca |
12111381 |
T |
 |
| Q |
549 |
aaataattcatacaa--------------cgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgac |
634 |
Q |
| |
|
| |||| |||||||| | ||||||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
12111382 |
atataaatcatacaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttataattgtccataattaaatcaaaccgac |
12111481 |
T |
 |
| Q |
635 |
atttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaattaa |
730 |
Q |
| |
|
|||||||| ||||||||| || |||| |||||||||||||| ||| ||| ||||||| ||||||||| ||||||| |||||| || | ||||||| |
|
|
| T |
12111482 |
atttggttcaaattacaccaaagtttaaaattcatcaaaacgttataaattgtccataattaaacaatacattacaactcattacatatcattaaattaa |
12111581 |
T |
 |
| Q |
731 |
atctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatc |
830 |
Q |
| |
|
||| ||||||||||||| | ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
12111582 |
atccctacttacattcatcacaattgcatatggaacgaacatacatatata--atattattttccaccatattccgaaatataaatccgacgtcgctatc |
12111679 |
T |
 |
| Q |
831 |
gtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcat |
880 |
Q |
| |
|
|| ||||| ||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
12111680 |
atctttaataaaccaaggcatatagcttgtcgttttccatgtgtattcat |
12111729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 382 - 669
Target Start/End: Complemental strand, 34742454 - 34742168
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||| ||| || ||||||||||||||||||| ||||| ||||| |||||||||| |||||| || ||||||||||||||| ||||||| ||||| |
|
|
| T |
34742454 |
aggaattagaaatctgactgcagttaactgccgaggaaaacctcggaagttaactgtcgaggaaaacaaattatgcagacagtgaactctgcatgattct |
34742355 |
T |
 |
| Q |
482 |
aaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat |
580 |
Q |
| |
|
||| |||||||||| ||||||| ||| || |||||||||||||||||| ||| ||||| |||||||||| |||||||||||| ||||||||| ||||| |
|
|
| T |
34742354 |
aaaacatttccaagccattttt-cggtcagtttttacctgtaattaaagtagagcatttcgaaaggcaaaa-aattcatacaacattgaaactcggacat |
34742257 |
T |
 |
| Q |
581 |
aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat |
669 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
34742256 |
aaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaatcgacatttgattcaaattacacaaacgtttgaaattcat |
34742168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 601 - 883
Target Start/End: Complemental strand, 47065148 - 47064858
Alignment:
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagt--------------g |
686 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| || |||||||||||| |||||||||||||||||| ||||||||| | |
|
|
| T |
47065148 |
cttttacaattgtccataattaaatcaaaccgacatttgatttaaattacacaaaagtttgaaattcatcaaaatgttacaaagtatccataattaaatg |
47065049 |
T |
 |
| Q |
687 |
tccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatata |
786 |
Q |
| |
|
||||| ||||||||||||||||||||| |||| |||||| || ||||||||||||| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
47065048 |
tccataattaaacaactcattacacatgattatattaaa------tccctacttacattcatcacaattgcatatggaacgaacatacatatataatata |
47064955 |
T |
 |
| Q |
787 |
ttatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| |||||||||||| |||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47064954 |
ttattttccaccatatttcgaaacataaatttgacgtcgctatcatctttaataaaccaaggcatatagcttgccgttttccatgcgtattcatctc |
47064858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 455 - 671
Target Start/End: Complemental strand, 17838621 - 17838405
Alignment:
| Q |
455 |
tgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaata |
553 |
Q |
| |
|
||||| ||||| | ||||||| |||||||| |||||||||| | |||||||||||| | ||||| ||||||||||||||| ||||| |||||||||| | |
|
|
| T |
17838621 |
tgcaggcagtgagctctgcatcattctaaaacatttccaagcc-ttttttcggccagtatttacttgtaattaaaccagagcatttcgaaaggcaaaaca |
17838523 |
T |
 |
| Q |
554 |
attcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacaca |
653 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
17838522 |
attcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacaca |
17838423 |
T |
 |
| Q |
654 |
aacgtttgaaattcatca |
671 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
17838422 |
aacgtttaaaattcatca |
17838405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 724 - 883
Target Start/End: Original strand, 29592852 - 29593011
Alignment:
| Q |
724 |
aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgt |
823 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
29592852 |
aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatgtattatcttccaccatattccgaaacataaatctgacgt |
29592951 |
T |
 |
| Q |
824 |
cgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
29592952 |
cgctatcgttgcgaataagccaaggcatataacttgccgttttccatgcgtattcatctc |
29593011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 417 - 671
Target Start/End: Complemental strand, 13323739 - 13323485
Alignment:
| Q |
417 |
gaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccatttttt |
515 |
Q |
| |
|
||||| ||||| ||||||||| |||| || || |||||||||| | || | ||| |||||||||||| |||||||||| ||||||| ||| || ||||| |
|
|
| T |
13323739 |
gaaaacctcgggagttaactgctgagcaaaacaaattatgcagataatgagctcttcataattctaaaacatttccaagccattttt-cgggcagttttt |
13323641 |
T |
 |
| Q |
516 |
acctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtcc |
615 |
Q |
| |
|
||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||| ||| |
|
|
| T |
13323640 |
acctgtaattaaagcagagcatttcgaaaggtaaaataattcatacaacgttgaaactgagacattaacaagaaaaatacaatattttttacaattttcc |
13323541 |
T |
 |
| Q |
616 |
ataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
13323540 |
ataattaaattaaaccggcatttcgttcaaattacacaaacgtttgaaattcatca |
13323485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 429 - 671
Target Start/End: Original strand, 5537907 - 5538147
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa |
527 |
Q |
| |
|
||||||||| |||||| || |||||| |||||||| | ||||||| |||||||| ||||| |||| ||||||| ||| || ||||||| |||||||| |
|
|
| T |
5537907 |
agttaactgccgaggaaaacaaattatgtagacagtgagctctgcatgattctaaaacattttcaagccattttt-cggtcagtttttac--gtaattaa |
5538003 |
T |
 |
| Q |
528 |
accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta |
627 |
Q |
| |
|
| |||| ||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| | |
|
|
| T |
5538004 |
agcagagcatttcgaaagggaaaataattcatacaacattgaaactcggacataaacaagaaaaataaaatatcttatacaattgtccataattaaatca |
5538103 |
T |
 |
| Q |
628 |
aaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
5538104 |
aaccgacatttggttcaaattatacaaacgtttgaaattcatca |
5538147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 590 - 671
Target Start/End: Complemental strand, 10522366 - 10522285
Alignment:
| Q |
590 |
aaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
10522366 |
aaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca |
10522285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 42499423 - 42499478
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
42499423 |
aggaatttgaaatccgactgcagttaactgccgaggaaaacctcggtagttaactg |
42499478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 17840937 - 17840894
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
17840937 |
tccgactgcagttaactgccgaggaaaacctcggtagttaactg |
17840894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 310 - 420
Target Start/End: Complemental strand, 29593460 - 29593349
Alignment:
| Q |
310 |
gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa |
408 |
Q |
| |
|
|||||||||||||| ||||| | | ||||||| |||||| ||| |||| ||| || || ||||||| | | |||||||||||||||| |||||||||| |
|
|
| T |
29593460 |
gttgttcccacatttgataaggttgtgccacactagtaaaatacaattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagttaa |
29593361 |
T |
 |
| Q |
409 |
ctgccgaagaaa |
420 |
Q |
| |
|
||||||| |||| |
|
|
| T |
29593360 |
ctgccgaggaaa |
29593349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 445
Target Start/End: Complemental strand, 15074268 - 15074224
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaa |
445 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
15074268 |
gcagttaactgccgaggaaaacctcggtagttaactgtcgaggaa |
15074224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 9367771 - 9367728
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
9367771 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
9367728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 525
Target Start/End: Complemental strand, 36186490 - 36186416
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaatt |
525 |
Q |
| |
|
||||| || |||||| |||||||||||||||||| ||||| |||| || |||||||| || ||||||||||||||| |
|
|
| T |
36186490 |
attatacatacagtgagttctgcataattctaaagcattttcaagcca-tttttcggtcagtttttacctgtaatt |
36186416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 40587675 - 40587730
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||| ||| |||||||||||||||||| ||| ||||| ||| ||||||||||| |
|
|
| T |
40587675 |
aggaattagaaatccgactgcagttaactgtcgaggaaaacctcagtagttaactg |
40587730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 30355281 - 30355243
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
30355281 |
ctgcagttaactgccgaggaaaacctcggtagttaactg |
30355243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 35606817 - 35606858
Alignment:
| Q |
396 |
cgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
35606817 |
cgacggcagttaactgccgaggaaaacctcggtagttaactg |
35606858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 40323209 - 40323262
Alignment:
| Q |
310 |
gttgttcccacattacataa-gctcggccacaccagtaaatgacatttttgccc |
362 |
Q |
| |
|
|||||||||||||||||||| ||| |||||| |||||||||||||||||||| |
|
|
| T |
40323209 |
gttgttcccacattacataaggctgtgccacatgagtaaatgacatttttgccc |
40323262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 343; Significance: 0; HSPs: 52)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 25890008 - 25890503
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||| ||||| ||||||||| ||||| |||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
25890008 |
aggaatttgaaatccgactgcagttaactaccgaggaaaacctcggtagtaaactgccgaggaaaactgattatgcagacaacaagttctgcataattct |
25890107 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
25890108 |
aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata |
25890207 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca |
681 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
25890208 |
aacaagataaatacaatatcttatacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca |
25890307 |
T |
 |
| Q |
682 |
aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata |
781 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25890308 |
aagtgttcataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata |
25890401 |
T |
 |
| Q |
782 |
atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc |
881 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||| |||||| |||||||| ||||||||||| |
|
|
| T |
25890402 |
atatattattttccaccatattctgaaacataaatccgacgtcgacgtcgtcgcgaataagcaaaggcatatcgcttgctgttttccacgcgtattcatc |
25890501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 34122538 - 34123047
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
34122538 |
aggaatttgaaatccggctgcagttaactgccgaggaaaagctcggtagttaactgccgaggaaaactgattatgcagacagtggattctgcataattct |
34122637 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||| |||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
34122638 |
aaatattttcaagccattttttcggccagtttttacctgtaattaaaccagagcattttcaaaggcaaaataattcatacaacattgaaactcggacata |
34122737 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca |
681 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
34122738 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaaggttaca |
34122837 |
T |
 |
| Q |
682 |
--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacg |
767 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| | | ||||||||||||| |||||||||||||||||| |
|
|
| T |
34122838 |
aggtgttcataattaagtgtccataattaaacaactcattacacatcattaaattaaattca------tacttacattcaatgcaattgcatatggaacg |
34122931 |
T |
 |
| Q |
768 |
aacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttc |
867 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
34122932 |
aacatatatatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttaccgttttc |
34123031 |
T |
 |
| Q |
868 |
catgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
34123032 |
catgcgtattcatctc |
34123047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 27863464 - 27863912
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
27863464 |
agttaactgccgaggaaaactgattatgcagatagtgggttctgcataattctaaacattttcaagccattttttcggccagtttttacctgtaattaaa |
27863563 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| ||||| |||||||||||||||||| |||| ||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
27863564 |
ccagaacatttccaaaggcaaaataattcacacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaattaa |
27863663 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt |
728 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
27863664 |
accgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattacacatcatt------aaatt |
27863757 |
T |
 |
| Q |
729 |
aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta |
828 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27863758 |
aaatccctacttacattcaacgcaattgcaaatggaacgaacatacatatataatatattatcttccaccatattccaaaacataaatccgacgtcgctg |
27863857 |
T |
 |
| Q |
829 |
tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27863858 |
tcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctc |
27863912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 13563702 - 13564150
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||||||||||||| |
|
|
| T |
13563702 |
agttaactgccgaggagaactgattatgcagacagtgggttctgcataattataaacatttccaagccattttttcggctagtttttacctgtaattaaa |
13563801 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13563802 |
ccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaa |
13563901 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt |
728 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
13563902 |
accgacatttggttaaaattaaacaaacgtttgaaattcattaaaacattacaaagtgtccataattaaacaactcattacacatcatt------aaatt |
13563995 |
T |
 |
| Q |
729 |
aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta |
828 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
13563996 |
aaatccctacttacattcaacgcaattgcatatggatcgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgcta |
13564095 |
T |
 |
| Q |
829 |
tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13564096 |
tcatcgcaaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
13564150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 37814615 - 37815091
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| || |||||||||||| || ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
37814615 |
gcagttaactgccgaggaaaaccttggtagttaactgccgaagaaatctgataatgcagacagtgggttctgcatagttctaaacatttccaagccattt |
37814714 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||||| |
|
|
| T |
37814715 |
ttccggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatat |
37814814 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca |
700 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
37814815 |
cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaact |
37814914 |
T |
 |
| Q |
701 |
actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat |
800 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37814915 |
actcattacacatcatt------aaattaaatccctacttactttcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccat |
37815008 |
T |
 |
| Q |
801 |
attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37815009 |
attccgaaacataaatccgacgtcgccgtcgtcgtgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
37815091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 424 - 883
Target Start/End: Original strand, 38855771 - 38856224
Alignment:
| Q |
424 |
tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa |
523 |
Q |
| |
|
|||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| || ||||||||||||| |
|
|
| T |
38855771 |
tcggcagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttt-cggtcagtttttacctgtaa |
38855869 |
T |
 |
| Q |
524 |
ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa |
623 |
Q |
| |
|
||||||||||| |||| ||||||| ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
38855870 |
ttaaaccagacaatttccaaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcgtaattaa |
38855969 |
T |
 |
| Q |
624 |
attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt |
722 |
Q |
| |
|
|||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
38855970 |
attaaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt----- |
38856064 |
T |
 |
| Q |
723 |
aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg |
822 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
38856065 |
-aaattcaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg |
38856163 |
T |
 |
| Q |
823 |
tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38856164 |
tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
38856224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 423 - 825
Target Start/End: Complemental strand, 34080149 - 34079753
Alignment:
| Q |
423 |
ctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgta |
522 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
34080149 |
ctcggcagttaactgcagaggaaaactgattatgcagacagtgggttctgcataattctaaacatttccaagccattttttcggccagtttttacctgta |
34080050 |
T |
 |
| Q |
523 |
attaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataatta |
622 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
34080049 |
attaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataatta |
34079950 |
T |
 |
| Q |
623 |
aattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt |
722 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
34079949 |
aattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattacacatcattaaat- |
34079851 |
T |
 |
| Q |
723 |
aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg |
822 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
34079850 |
-----taaatccttacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacataaatccgccg |
34079756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 299; E-Value: 1e-167
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 7017526 - 7018007
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||| |||||||||||| | | ||||| ||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
7017526 |
aggaatttgaaatccggctgcagttaactctcaaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattct |
7017624 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
|||||||| |||| |||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
7017625 |
aaacattttcaagccattttttcggccagtttttatctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata |
7017724 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca |
681 |
Q |
| |
|
| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7017725 |
atgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca |
7017824 |
T |
 |
| Q |
682 |
aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata |
781 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7017825 |
aagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata |
7017918 |
T |
 |
| Q |
782 |
atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc |
881 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
7017919 |
atatattatcttccaccatattct-------------gacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccattttccatgtgtattcatc |
7018005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 424 - 883
Target Start/End: Original strand, 11029064 - 11029516
Alignment:
| Q |
424 |
tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa |
523 |
Q |
| |
|
|||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
11029064 |
tcggcagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttttcgaccagtttttacctgtaa |
11029163 |
T |
 |
| Q |
524 |
ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa |
623 |
Q |
| |
|
||||||||||| |||| ||||||| ||||||||||||||| ||||||||| | ||||| |||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
11029164 |
ttaaaccagacaatttccaaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatgcaatatcttttacaattgttcataattaa |
11029263 |
T |
 |
| Q |
624 |
attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt |
722 |
Q |
| |
|
|||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||| |
|
|
| T |
11029264 |
attaaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaa--gtccataattaaactactcatcacacatcatt----- |
11029356 |
T |
 |
| Q |
723 |
aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg |
822 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
11029357 |
-aaattaaatccctacttacattcaacgcaattacatatgaaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg |
11029455 |
T |
 |
| Q |
823 |
tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11029456 |
tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
11029516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 499 - 883
Target Start/End: Original strand, 7796708 - 7797086
Alignment:
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | |||||||||| ||||||||| |
|
|
| T |
7796708 |
tttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggttataaacaagaaaaatacaat |
7796807 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
7796808 |
atcttttataattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaa |
7796907 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7796908 |
caactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
7797001 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7797002 |
atattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctc |
7797086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 440 - 883
Target Start/End: Original strand, 28882066 - 28882497
Alignment:
| Q |
440 |
gaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattt |
539 |
Q |
| |
|
|||||| ||| ||||||||| |||| |||||| ||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
28882066 |
gaggaaaactaattatgcagccagtaggttctacataattctaagcatttccaagccattttttcggccagtttttacctgtaattaaaccagagcattt |
28882165 |
T |
 |
| Q |
540 |
tcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg |
639 |
Q |
| |
|
|||||||||| ||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28882166 |
acaaaggcaaa------catacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaaaccgacatttc |
28882259 |
T |
 |
| Q |
640 |
gttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctact |
739 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| | ||| |
|
|
| T |
28882260 |
gttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccccact |
28882353 |
T |
 |
| Q |
740 |
tacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaat |
839 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| |
|
|
| T |
28882354 |
tacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcaaat |
28882453 |
T |
 |
| Q |
840 |
aagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
28882454 |
aagcaaatgcatatagcttgccgttttccatgcgtattcatctc |
28882497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 423 - 883
Target Start/End: Complemental strand, 1039823 - 1039356
Alignment:
| Q |
423 |
ctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgta |
522 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||| |||||||| || || |||||||||||| |
|
|
| T |
1039823 |
ctcggcagttaactgccgaggaaaactgattatgcagacagtgagttctgcataatcctaaatatttccaagccattttttgggtcagtttttacctgta |
1039724 |
T |
 |
| Q |
523 |
attaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataatta |
622 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
1039723 |
attaaaccagagcattttcaaaggcaaaataattcatacaagattgaaactcggacataaacacgataaatacaatatcttttacaattgtccataatta |
1039624 |
T |
 |
| Q |
623 |
aattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgatta--------------aacaactcatta |
708 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| |
|
|
| T |
1039623 |
aattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtctataattaagtgtcaataatttaacaactcatta |
1039524 |
T |
 |
| Q |
709 |
cacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaa |
808 |
Q |
| |
|
|| |||||| |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
1039523 |
catatcatt------aaattaaatccctacttacattcaacgcaactgcatatggtacgaacatacatatataacatattattttccaccatattc-caa |
1039431 |
T |
 |
| Q |
809 |
acataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1039430 |
acataaatccgatgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
1039356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 400 - 883
Target Start/End: Complemental strand, 33995189 - 33994713
Alignment:
| Q |
400 |
tgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcat |
498 |
Q |
| |
|
|||| ||||||||||| ||||| ||||| ||||||||| |||||| || |||||||||||||||||| ||||||||| | || |||||||||| ||| |
|
|
| T |
33995189 |
tgcaattaactgccgaggaaaacctcgggagttaactgccgaggaaaacat-ttatgcagacagtgggttatgcataattgttaagcatttccaagccat |
33995091 |
T |
 |
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
|||| |||||| ||||||| ||||||| ||||||| ||||| ||||||||| |||| | ||||||| || |||||||| |||||||||| ||||||||| |
|
|
| T |
33995090 |
tttt-cggccagtttttacatgtaatttaaccagaacatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaat |
33994992 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||| ||||||||||| ||||| | ||||| |||||||||| |||| |
|
|
| T |
33994991 |
atcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacaaaaaagtttgaaattcttcaaatcgttacatagtgtccatgcataaa |
33994892 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
|||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33994891 |
caacacattacacatcattaaat------taaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
33994798 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
33994797 |
atattaagaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagtttgccgttgtccatgcgtattcatctc |
33994713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 452 - 883
Target Start/End: Original strand, 24053237 - 24053672
Alignment:
| Q |
452 |
ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
|||||||||||||| ||||||||||||| | || ||||| |||| |||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
24053237 |
ttatgcagacagtgagttctgcataattgtcaagcattttcaagccatttt-tcggccagtttttacctgtaatttaaccagagcattttcaaaggcaat |
24053335 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||| | ||||||| || |||||||| |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| ||| |
|
|
| T |
24053336 |
ataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattacatcaaaccgacatttggttcaaaatac |
24053435 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattc |
746 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||||| |||||||||| |||||| |||||| | | |||||| ||| ||| |||||||| |
|
|
| T |
24053436 |
acaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacatattacaactcattacacatcattaaattatatccctaattacattc |
24053535 |
T |
 |
| Q |
747 |
aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa |
846 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
24053536 |
aacgcaattgcatatagaaagaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgtcgctatcgtcttcaattcgccaa |
24053635 |
T |
 |
| Q |
847 |
ggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
24053636 |
ggcatatagcttgtcgttttccatgcgtattcatctc |
24053672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 452 - 883
Target Start/End: Original strand, 24050110 - 24050547
Alignment:
| Q |
452 |
ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
||||||||| |||| ||||||||||||| | || |||||||||| |||||| ||||||| |||| || ||||||| ||||||| |||| |||||| || |
|
|
| T |
24050110 |
ttatgcagatagtgagttctgcataattgttaagcatttccaagccatttt-tcggccagttttcacatgtaatttaaccagagcattaccaaaggaaat |
24050208 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||| | ||||||| || ||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| |
|
|
| T |
24050209 |
ataacttatacaacatttaaattcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatac |
24050308 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattc |
746 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||| ||||| |||||||||| ||||||| |||||| | | |||||| ||| |||||||||||| |
|
|
| T |
24050309 |
acaaaagtttgaaattcatcaaaacgttacatagtatccataattaaacaacacattacaactcattacacatcattaaattatatccctacttacattc |
24050408 |
T |
 |
| Q |
747 |
aacgcaattgcatatggaacgaacatacatatata--atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcc |
844 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
24050409 |
aacgcaattgcatatagaacgaacatacatatataatatatattatcttccaccatattctgaaacataaatccgacgtcgctatcgtcttcaattcgcc |
24050508 |
T |
 |
| Q |
845 |
aaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24050509 |
aaggcatatagcttgccgttttccatgcgtattcatctc |
24050547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 399 - 833
Target Start/End: Original strand, 25877652 - 25878089
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
||||| ||||||||||| ||||| |||||||||||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
25877652 |
ctgcaattaactgccgaggaaaacttcggtagttaactgccgaggaaaacat-ttatgcagacagtgggttctgcataattctaaagcatttccaagcca |
25877750 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| |||||||||| |||| |||| ||||||||| |||||||| | ||||||||||| |||||||| |
|
|
| T |
25877751 |
tttt-tcggccagtttttacctgtaattaaaccagagcattttcaaaagcaatataaatcatacaacattgaaacttggtcataaacaagaaaaatacaa |
25877849 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca--------------aa |
683 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| || |
|
|
| T |
25877850 |
tatcttttacaattgtccataattaaat--aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaa |
25877947 |
T |
 |
| Q |
684 |
gtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataat |
783 |
Q |
| |
|
|||||||| ||||||||||||||||||| | ||| | |||||||| ||||||||| || | |||||||||||||||| |||||||||||||||| |
|
|
| T |
25877948 |
gtgtccataattaaacaactcattacacgtgatt------atattaaatccctacttaca--catcacaattgcatatggaacaaacatacatatataat |
25878039 |
T |
 |
| Q |
784 |
atattatcttccaccatattctaaaacataaatccgacgtcgctatcgtc |
833 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
25878040 |
atattattttccaccatattccgaaacataaatccgacgtcgctatcgtc |
25878089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 382 - 653
Target Start/End: Complemental strand, 28388578 - 28388307
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
28388578 |
aggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaactgccgaagaaaactgattatgcagacagtgggttctgcataatttt |
28388479 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| || |||||| |
|
|
| T |
28388478 |
aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaattcggacata |
28388379 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacaca |
653 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
28388378 |
aacaaaataaatacaatattttttacaattgtccataattaaattaaaccgacatttggttcaaattacaca |
28388307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 655 - 883
Target Start/End: Complemental strand, 14280764 - 14280542
Alignment:
| Q |
655 |
acgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaat |
754 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| || |||||||||||||| ||||| |
|
|
| T |
14280764 |
acgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcattaaattaaa------tccctacttacattcaatgcaat |
14280671 |
T |
 |
| Q |
755 |
tgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatata |
854 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
14280670 |
tacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatata |
14280571 |
T |
 |
| Q |
855 |
gcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
14280570 |
gcttgccgttttccatgcgtattcatctc |
14280542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 400 - 671
Target Start/End: Complemental strand, 7762285 - 7762013
Alignment:
| Q |
400 |
tgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcat |
498 |
Q |
| |
|
|||||||||||| ||| ||||| ||| | ||||||||| |||||| | ||||||||||| ||||| | ||||||| |||||||| ||||| |||| | | |
|
|
| T |
7762285 |
tgcagttaactgtcgaggaaaacctcaggagttaactgccgaggaaaattgattatgcaggcagtgagctctgcatcattctaaaacattttcaagcctt |
7762186 |
T |
 |
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| | |||||| |||||||||| |||||||||||| ||||||||| |||||||||||||| ||||||| |
|
|
| T |
7762185 |
tttttcggccagtttttacctgtaattaaaccaaagcattttgaaaggcaaaacaattcatacaacattgaaactcgaacataaacaagatagatacaat |
7762086 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
7762085 |
atcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca |
7762013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 30352510 - 30352939
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
||||||||||||||| || ||||||||| | || ||||| |||| ||||||| || || |||||| |||||| |||| |||| ||||| |||| |||| |
|
|
| T |
30352510 |
attatgcagacagtgaattttgcataattgttaagcattttcaagccattttt-cgatcagtttttatctgtaaataaatcagagcatttccaaatgcaa |
30352608 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| |||||||| || |||||||| |||||| ||| |||||||||||||||| ||||||||||||||| ||||| ||||||||| ||| || |
|
|
| T |
30352609 |
tataagccatacaacatttaaactcagtcataaa--agaaaaatacaatatctttt-----tgtccataattaaatcaaaccagcatttggttcaaaata |
30352701 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatta----aaattaaatctctacttacatt |
745 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| ||||||||| |||||||| | ||||||| |||||| || ||||||||||| |||||||||| |
|
|
| T |
30352702 |
cacaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaacagcacattacaactcattacatatcaataaattaaatctttacttacatt |
30352801 |
T |
 |
| Q |
746 |
caacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcca |
845 |
Q |
| |
|
||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||| || |||||| |
|
|
| T |
30352802 |
caatgcaattgcatatggaaaaaacatacatatataatatattattttccacaatattccgaaacataaatacgacgtcgctatcgtctttaacaagcca |
30352901 |
T |
 |
| Q |
846 |
aggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||| ||||||||||| ||||| |||||||||| |
|
|
| T |
30352902 |
aggcatataacttgccgtttttcatgcatattcatctc |
30352939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 413 - 671
Target Start/End: Original strand, 38407192 - 38407449
Alignment:
| Q |
413 |
cgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccatt |
511 |
Q |
| |
|
||||||||| |||||||||||||| || ||| || |||||| |||||||| | ||||||| |||||||| |||||||||| |||||| |||||| | |
|
|
| T |
38407192 |
cgaagaaaacatcggtagttaactgccgaagaaaacaaattatgtagacagtgagctctgcatgattctaaaacatttccaagccatttt--cggccagt |
38407289 |
T |
 |
| Q |
512 |
ttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaatt |
611 |
Q |
| |
|
||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
38407290 |
ttttacctgtaattaaagcagaacatttcgaaaggcaaaataattcatacaacattgaaactcagacataaacaagaaaaatacaatatcttttagaatt |
38407389 |
T |
 |
| Q |
612 |
gtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38407390 |
gtccataattaaatcaaaccggcatttggttcaaattacacaaacgtttgaaattcatca |
38407449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 399 - 671
Target Start/End: Complemental strand, 41799809 - 41799539
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct-----aaacatttccaa |
493 |
Q |
| |
|
||||||||||||||||| ||||| |||| ||||||||| ||||||| || | |||||||||| | ||||||| ||||| |||||||| ||| |
|
|
| T |
41799809 |
ctgcagttaactgccgatgaaaacttcggaagttaactgctgaggaaaac-----aagcagacagtgagctctgcatgattctttctaaaacattttcaa |
41799715 |
T |
 |
| Q |
494 |
gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat |
593 |
Q |
| |
|
| ||||||| |||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||| |||| |
|
|
| T |
41799714 |
gccattttt-cggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaacttggacataaacaagaaaaat |
41799616 |
T |
 |
| Q |
594 |
acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
41799615 |
acaat-ttttttacaattgtccataattaaattaaaccgacatttgattcaaattacacaaacgtttgaaattcatca |
41799539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 644 - 883
Target Start/End: Original strand, 4196792 - 4197023
Alignment:
| Q |
644 |
aaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttaca |
743 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| || |||| |||||| || ||||||||| |
|
|
| T |
4196792 |
aaattacacaaacgtttggtattcatcaaaacgttacaaagtgtccataattaaacaactcattacatatgattatattaaa------tccctacttaca |
4196885 |
T |
 |
| Q |
744 |
ttcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagc |
843 |
Q |
| |
|
|||| | ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
4196886 |
ttcatcacaattgcatatggaacgaa--tacatatataatatattattttcgaccatattccgaaacataaatctgacgtcgctatcgtctttaataagc |
4196983 |
T |
 |
| Q |
844 |
caaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
4196984 |
caaggcatgtagcttgtcgttttccatgcatattcatctc |
4197023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 506 - 834
Target Start/End: Original strand, 6267612 - 6267933
Alignment:
| Q |
506 |
gccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatctttt |
605 |
Q |
| |
|
|||||||||||||| ||||| | ||||| ||||| ||||||||| | | || |||||| || | ||||| ||||||||||| ||||||| |||||||| |
|
|
| T |
6267612 |
gccattttttacctataattcagccagagcatttccaaaggcaatactagtcgtacaacatttatcctcagtcataaacaagaaaaatacattatctttt |
6267711 |
T |
 |
| Q |
606 |
acaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactca |
705 |
Q |
| |
|
|| || ||||||||||||| || ||||||||| |||||||| || || ||||||||||||||| ||||||| | ||||||||| |||||||||| || |
|
|
| T |
6267712 |
accgttatccataattaaatcaatccgacatttcattaaaattgcaagaatgtttgaaattcatcataacattaaagagtgtccataattaaacaacaca |
6267811 |
T |
 |
| Q |
706 |
ttacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattct |
805 |
Q |
| |
|
||||| |||||| |||||||||||||||| |||||| ||||| ||||| ||||||| || |||||||||||||||||||||||||| ||||||| |
|
|
| T |
6267812 |
ttacatatcatt------aaattaaatctctactgacattctacgcagttgcagatggaacaaaaatacatatataatatattatcttccatcatattc- |
6267904 |
T |
 |
| Q |
806 |
aaaacataaatccgacgtcgctatcgtcg |
834 |
Q |
| |
|
||||||||| ||||||||| ||||||| |
|
|
| T |
6267905 |
cgaacataaattcgacgtcgccatcgtcg |
6267933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 724 - 882
Target Start/End: Complemental strand, 28387978 - 28387821
Alignment:
| Q |
724 |
aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgt |
823 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
28387978 |
aaattaaatccctacttacaatcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgt |
28387879 |
T |
 |
| Q |
824 |
cgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct |
882 |
Q |
| |
|
||||||||||| |||||| | |||||||||| |||| ||||||||||| |||||||||| |
|
|
| T |
28387878 |
cgctatcgtcgtgaataa-caaaggcatataacttgtcgttttccatgtgtattcatct |
28387821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 753 - 883
Target Start/End: Complemental strand, 43179559 - 43179429
Alignment:
| Q |
753 |
attgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcata |
852 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
43179559 |
attgcagatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatcaaacgtcgctatcgtcgcgaataagccaaggcata |
43179460 |
T |
 |
| Q |
853 |
tagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |
|
|
| T |
43179459 |
tagcttaccgttttccatgcgtgttcatctc |
43179429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 451 - 603
Target Start/End: Original strand, 4196637 - 4196790
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| || ||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
4196637 |
attatgcagacagtgggttctgcataattctaaagcatttccaagctattttt-cggtcaatttttacctgtaattaaaccagagcatttccaaaggcaa |
4196735 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaag-ataaatacaatatctt |
603 |
Q |
| |
|
|||| ||||||||| ||||||||| | |||||||||| | |||||||||||||| |
|
|
| T |
4196736 |
tataaatcatacaacattgaaactcggtcataaacaagaaaaaatacaatatctt |
4196790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 500 - 710
Target Start/End: Complemental strand, 43179841 - 43179631
Alignment:
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
||||||| || ||||||||||||||| ||||||| ||||||||||||||| | | || |||||| || | |||| | || |||||||| ||||| | || |
|
|
| T |
43179841 |
ttttcggtcagtttttacctgtaattcaaccagagcattttcaaaggcaatactagtcgtacaacatttatactcggtcaaaaacaagaaaaatatatta |
43179742 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac |
699 |
Q |
| |
|
||||||||| |||||||||||||| || || |||||| ||||||||||||| || ||||||||||||||||||| ||| | ||||||||| ||||||| |
|
|
| T |
43179741 |
tcttttacacttgtccataattaatacaatccaacatttcgttaaaattacacgaatgtttgaaattcatcaaaacgttaaagagtgtccataattaaac |
43179642 |
T |
 |
| Q |
700 |
aactcattaca |
710 |
Q |
| |
|
||| ||||||| |
|
|
| T |
43179641 |
aacacattaca |
43179631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 401 - 560
Target Start/End: Complemental strand, 14280940 - 14280781
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| | |||||| | ||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
14280940 |
gcagttaactgccgaggaaaacctcggtagttaacggccgaggaaatttaattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
14280841 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcata |
560 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||| | || |||||||||| |
|
|
| T |
14280840 |
tttcggccagtttttacctgtaattaaaccagagcatttccaaatgtaatataattcata |
14280781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 312 - 437
Target Start/End: Original strand, 7757268 - 7757394
Alignment:
| Q |
312 |
tgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaact |
410 |
Q |
| |
|
||||||||||||||||||| || ||||||| |||||||||| ||||||||| || || ||||||| | | | | || ||| |||| |||||||||||| |
|
|
| T |
7757268 |
tgttcccacattacataagactatgccacacgagtaaatgacgtttttgccccctcgacagttaactgccgaagttttagaaatccggctgcagttaact |
7757367 |
T |
 |
| Q |
411 |
gccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||| ||||| |||| |||||||||| |
|
|
| T |
7757368 |
gccgaggaaaacctcgctagttaactg |
7757394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 422
Target Start/End: Complemental strand, 13568207 - 13568094
Alignment:
| Q |
310 |
gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa |
408 |
Q |
| |
|
||||||||||||||||||||| || |||| || |||||||||| ||||| ||| | | |||||||| | | ||||||||||| |||| |||||||||| |
|
|
| T |
13568207 |
gttgttcccacattacataaggctgtgccatacgagtaaatgacgtttttaccccatcggtagttaactgccgaggaatttgaaatccggctgcagttaa |
13568108 |
T |
 |
| Q |
409 |
ctgccgaagaaaat |
422 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
13568107 |
ctgccgaggaaaat |
13568094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 34124067 - 34123939
Alignment:
| Q |
310 |
gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa |
408 |
Q |
| |
|
|||||||||||||| ||||| | | |||||||||||||| || |||||||| || | ||||||| ||| || |||||||| |||| |||||||||| |
|
|
| T |
34124067 |
gttgttcccacatttaataaggttgtgccacaccagtaaaatacgattttgccccctcggcagttaactgtcgagaaatttgaaatccggctgcagttaa |
34123968 |
T |
 |
| Q |
409 |
ctgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||| | ||||| ||||||||||||||| |
|
|
| T |
34123967 |
ctgccaaggaaaacctcggtagttaactg |
34123939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 17966933 - 17966882
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaa |
445 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||||| ||||||| |
|
|
| T |
17966933 |
tccgactgcagttaactaccgaggaaaatctcggtagttaactgctgaggaa |
17966882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 384 - 433
Target Start/End: Original strand, 41798834 - 41798883
Alignment:
| Q |
384 |
gaatttgaattccgactgcagttaactgccgaagaaaatctcggtagtta |
433 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
41798834 |
gaatttgaaatccggctgcagttaactgccgaagaaaacctcggtagtta |
41798883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 39743234 - 39743154
Alignment:
| Q |
355 |
ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaac |
435 |
Q |
| |
|
|||||||| || || ||||||| | | ||||||||||| | |||||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
39743234 |
ttttgccccctcgacagttaactgccgaggaatttgaaattcgactgcagttaactgccgaggaaaacctcggcagttaac |
39743154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 437
Target Start/End: Complemental strand, 542861 - 542794
Alignment:
| Q |
370 |
agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||| ||| ||||||| ||| |||| |||||| |||||||||| |||| |||||||||||||||| |
|
|
| T |
542861 |
agttaactgtcgaggaattagaaatccggctgcagctaactgccgaggaaactctcggtagttaactg |
542794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 28387283 - 28387338
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||| |||| ||||||||||||||| |
|
|
| T |
28387283 |
aggaatttgaattccggctgcagttaattgccgaggaaatcctcggtagttaactg |
28387338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 25497542 - 25497580
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25497542 |
ctgcagttaactgccgaggaaaatctcggtagttaactg |
25497580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 11346038 - 11346083
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgagga |
444 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||| ||||| |
|
|
| T |
11346038 |
ctgcagttaactgccgaggaaaacctcggtagttaactgtcgagga |
11346083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 8088 - 8052
Alignment:
| Q |
400 |
tgcagttaactgccgaagaaaatctcggtagttaact |
436 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8088 |
tgcagttaactgccgaggaaaatctcggtagttaact |
8052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 8577007 - 8577043
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8577007 |
gcagttaactgccgaagaaaacctcggtagttaactg |
8577043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 573 - 665
Target Start/End: Complemental strand, 16440284 - 16440192
Alignment:
| Q |
573 |
tcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaat |
665 |
Q |
| |
|
|||| ||||||||||| |||||| || ||||| ||||| |||||||||||| || |||| |||| ||||||||||||| || |||| |||| |
|
|
| T |
16440284 |
tcagtcataaacaagaacaatacataatattttagaattgaccataattaaatcaatccgatatttcgttaaaattacacgaatgtttaaaat |
16440192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 437
Target Start/End: Complemental strand, 4204296 - 4204215
Alignment:
| Q |
354 |
tttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||| || ||||||| ||| || |||||||| ||| ||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
4204296 |
tttttgccctctcgacagttaactgtcgagaaatttgaaa-ccg-ctgcagttaactgtcgaggaaaacctcggtagttaactg |
4204215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 19037517 - 19037474
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
19037517 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
19037474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 25897138 - 25897083
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| | |||| ||||||||||||||| |
|
|
| T |
25897138 |
aggaatttgaactccggctgcagttaactgcccaggaaatcctcggtagttaactg |
25897083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 41201759 - 41201798
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgt |
438 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
41201759 |
ctgcagttaactgccgaggaaaacctcggtagttaactgt |
41201798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 400 - 442
Target Start/End: Complemental strand, 30354437 - 30354395
Alignment:
| Q |
400 |
tgcagttaactgccgaagaaaatctcggtagttaactgttgag |
442 |
Q |
| |
|
|||||||||||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
30354437 |
tgcagttaactgtcgaggaaaacctcggtagttaactgttgag |
30354395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 30708913 - 30708863
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactga |
451 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||| |||||| ||||| |
|
|
| T |
30708913 |
gcagttaactgccgaagaaaacctcgatagttaactgccgaggaaaactga |
30708863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 5804 - 5845
Alignment:
| Q |
396 |
cgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||| |||||| ||||| ||||||||||||||| |
|
|
| T |
5804 |
cgactgcagttaattgccgaggaaaacctcggtagttaactg |
5845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 674
Target Start/End: Original strand, 30292313 - 30292382
Alignment:
| Q |
605 |
tacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaa |
674 |
Q |
| |
|
|||||||| ||| |||||||| || |||||||| ||||||||||||| || ||| |||||||| ||||| |
|
|
| T |
30292313 |
tacaattgaccaaaattaaatcaattcgacatttcgttaaaattacacgaatgttcgaaattcaacaaaa |
30292382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 484
Target Start/End: Original strand, 31094618 - 31094651
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa |
484 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |
|
|
| T |
31094618 |
attatgcagacagtggattctgcataattctaaa |
31094651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 34682244 - 34682325
Alignment:
| Q |
355 |
ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaact |
436 |
Q |
| |
|
|||||| | ||||| ||||||| ||| ||||||| || ||| ||||||||||||||||| ||||| ||||| |||||||| |
|
|
| T |
34682244 |
ttttgctcccttgacagttaactgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaacctcgggagttaact |
34682325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 342; Significance: 0; HSPs: 41)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 355 - 883
Target Start/End: Original strand, 35962294 - 35962816
Alignment:
| Q |
355 |
ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgatta |
454 |
Q |
| |
|
||||||||||| | ||||||| ||| ||||||||||| |||| || |||||||||||||| ||||| ||||| ||||||||| |||||| |||||||| |
|
|
| T |
35962294 |
ttttgccctctcggcagttaactgtcgaggaatttgaaatccggctacagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgatta |
35962393 |
T |
 |
| Q |
455 |
tgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataa |
554 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||| |||||| ||| ||||||||||||| |
|
|
| T |
35962394 |
tgcaggcagtgggttctgcataattctaaacattttcaagccattttttcggccaatttttacgtgtaattataccagagtattacaaaaggcaaaataa |
35962493 |
T |
 |
| Q |
555 |
ttcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaa |
654 |
Q |
| |
|
|||||||||| || |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
35962494 |
ttcatacaacattaaaactcggatataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgaaatttggttcaaattacacaa |
35962593 |
T |
 |
| Q |
655 |
acgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaat |
754 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
35962594 |
acgtttgaaattcatcaaaacgttacaaagtgtgcataattaaacaactcattgcacatcatt------aaattaaattcctacttacattcaacgcaat |
35962687 |
T |
 |
| Q |
755 |
tgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatata |
854 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35962688 |
tgcatatggaacgaacatacgtatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatata |
35962787 |
T |
 |
| Q |
855 |
gcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||| ||||||||||||||||||||||| |
|
|
| T |
35962788 |
gcttgtcgttttccatgcgtattcatctc |
35962816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 39518 - 39966
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
39518 |
agttaactgccgaggaaaactgattatgcagacagtgagttctgcataattctaaacatttccaagccattttttcggccaatttttacctgtaattaaa |
39617 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39618 |
ccagagcatttccaaaggcaaaataattcatacaagattgaacctcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
39717 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt |
728 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
39718 |
accgacatttggttaaaattaaacaaacatttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattacacatcatt------aaatt |
39811 |
T |
 |
| Q |
729 |
aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta |
828 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| |
|
|
| T |
39812 |
aaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatccgacatcgccg |
39911 |
T |
 |
| Q |
829 |
tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| |||||||||| ||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39912 |
tcgttgcgaataagcaaagacatatagcttgtcgttttccatgcgtattcatctc |
39966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 23923995 - 23924474
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgtt----gaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtc |
496 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||| |||||| |||||||||||||||| ||| || ||||||||||||||||||| |||| | |
|
|
| T |
23923995 |
gcagttaactgccgaggaaaacttcggtagtaaactgactgccgaggaaaactgattatgcagacaatggattatgcataattctaaacattttcaagcc |
23924094 |
T |
 |
| Q |
497 |
attttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaataca |
596 |
Q |
| |
|
|||||| ||| || ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||| |||| |
|
|
| T |
23924095 |
attttt-cggtcagtttttacctgtaattaaactagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaaaaagataagtaca |
23924193 |
T |
 |
| Q |
597 |
atatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgatta |
696 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
23924194 |
atatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataatta |
23924293 |
T |
 |
| Q |
697 |
aacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcca |
796 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23924294 |
aacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaactgcatatggaacgaacatacatatataatatattattttcca |
23924387 |
T |
 |
| Q |
797 |
ccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23924388 |
ccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
23924474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 412 - 883
Target Start/End: Complemental strand, 31960090 - 31959611
Alignment:
| Q |
412 |
ccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccatt |
511 |
Q |
| |
|
|||| ||||| ||||||||| |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||| | |
|
|
| T |
31960090 |
ccgaggaaaacctcggtagtaaactgtcgaggaaaactgattatgcagacagcaagttctgcataattctaaacatttgcaagccattttttcggccagt |
31959991 |
T |
 |
| Q |
512 |
ttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaatt |
611 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
31959990 |
ttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatataagattgaaactcggacataaacaagataaatacaatatcttttacaatt |
31959891 |
T |
 |
| Q |
612 |
gtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgt--------------ccatgattaa |
697 |
Q |
| |
|
|| ||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
31959890 |
gttcatgattaaattaaacccacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaattgtccataattaa |
31959791 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac |
797 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31959790 |
acaactcattacacatcatt------aaattaaatccatacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccac |
31959697 |
T |
 |
| Q |
798 |
catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31959696 |
catattccaaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
31959611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 7344597 - 7344120
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
7344597 |
gcagttaactgccgaggaaaacctcgggagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
7344498 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||| ||||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
7344497 |
tt-cggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
7344399 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
7344398 |
atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
7344299 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7344298 |
ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
7344205 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7344204 |
atattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
7344120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 32375684 - 32376161
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
32375684 |
gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
32375783 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| |||||| || |||||||||| | ||||||||| |||||| |||||||||||||| |
|
|
| T |
32375784 |
tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcgaacataatgaagataaatacaat |
32375882 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
32375883 |
atcttttacaattgttaataattaaattaaatcgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
32375982 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||||||||||| || |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
32375983 |
ctactcattacacatcattaaattaaa------tccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
32376076 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
32376077 |
atattccgaaacataaatccgacgtcgccatcgtcgcgaataagcaaaggcatatagcttgccgtttcccatgcgtattcatctc |
32376161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 8419437 - 8419914
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||| ||||||||| ||||| |
|
|
| T |
8419437 |
gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacaataagttctgcataattctaagtatttccaagccattt |
8419536 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| |||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
8419537 |
tttcggccagtttttatctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
8419635 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8419636 |
atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
8419735 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
8419736 |
ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacgtacatatataatatattgtcttccacc |
8419829 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8419830 |
atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
8419914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 466 - 883
Target Start/End: Original strand, 30301231 - 30301644
Alignment:
| Q |
466 |
ggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aa |
563 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||| || |||||||||| | |
|
|
| T |
30301231 |
ggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtat |
30301330 |
T |
 |
| Q |
564 |
cgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaa |
663 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
30301331 |
gattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaa |
30301430 |
T |
 |
| Q |
664 |
attcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatgg |
763 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||| |
|
|
| T |
30301431 |
attcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatgg |
30301524 |
T |
 |
| Q |
764 |
aacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgt |
863 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30301525 |
aacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgt |
30301624 |
T |
 |
| Q |
864 |
tttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
30301625 |
tttccatgcgtattcatctc |
30301644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 451 - 883
Target Start/End: Complemental strand, 43377283 - 43376843
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
43377283 |
attatgcagacagtgggttctacataattctaaagcatttccaagccattttt-cggccagtttttacctgtaattaaaccagagcatttccaaaggcaa |
43377185 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |
|
|
| T |
43377184 |
tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatgaaaccgaaatttggttcaagtta |
43377085 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattacaaagt--------------gtccatgattaaacaactcattacacatcattaaattaaaattaaatctc |
735 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
43377084 |
cacaaacgtttgaaattcatcaaaacgttacaaagtgtccttaattaagtgtccataattaaacaactcattacacatcatt------aaattaaattcc |
43376991 |
T |
 |
| Q |
736 |
tacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgc |
835 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||| |
|
|
| T |
43376990 |
tacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcactatcgtcgc |
43376891 |
T |
 |
| Q |
836 |
gaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
43376890 |
gaataaaccaatgcatatagcttgccgttttccatgcgtattcgtctc |
43376843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 417 - 883
Target Start/End: Original strand, 43679446 - 43679905
Alignment:
| Q |
417 |
gaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccatttttt |
515 |
Q |
| |
|
||||| ||||||||||||||| || ||| | | ||||| ||||||||||||| |||||||||||||| ||||||||| ||||||||| ||| | ||||| |
|
|
| T |
43679446 |
gaaaacctcggtagttaactgccgaagaaaa-taattatacagacagtgggttttgcataattctaaagcatttccaaatcatttttt-ggctaattttt |
43679543 |
T |
 |
| Q |
516 |
acctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtcc |
615 |
Q |
| |
|
|| ||||||||||||| | |||| ||||||||| |||| |||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
43679544 |
acatgtaattaaaccaaaatatttccaaaggcaatataaatcatacaaaattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtcc |
43679643 |
T |
 |
| Q |
616 |
ataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatca |
715 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
43679644 |
ataattaaatcaaaccgacatttggttcaaattacacaaaagtttaaaattcatcaaaacgttacaaagtgttcataattaaacaactcattacacatca |
43679743 |
T |
 |
| Q |
716 |
ttaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaa |
815 |
Q |
| |
|
|| | |||||||| || |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
43679744 |
tt------atattaaatccctgcttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaa |
43679837 |
T |
 |
| Q |
816 |
tccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|| |||||| |||||||| |||||| ||||||||||| |||| |||||||||||||| |||||||| |
|
|
| T |
43679838 |
tctgacgtctctatcgtctttaataagtcaaggcatataacttgtcgttttccatgcgtgttcatctc |
43679905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 2124260 - 2124703
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaat---taaaccagaccattttcaaagg |
546 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||| ||| ||||||||| ||||| |||||| |
|
|
| T |
2124260 |
attatgcagacagtgggttctgcataattctaatgcatttccaagccattttt-cggccactttttacctggaatatttaaaccagagcatttccaaagg |
2124358 |
T |
 |
| Q |
547 |
caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa |
646 |
Q |
| |
|
||| |||| ||||||||| ||||||||| | ||||| ||||| ||||| ||||||||||||| ||||||||| |||||| |||||||||||||||| ||| |
|
|
| T |
2124359 |
caatataaatcatacaacattgaaactcggtcataaccaagaaaaatataatatcttttacagttgtccatagttaaatcaaaccgacatttggttcaaa |
2124458 |
T |
 |
| Q |
647 |
ttacacaaacgtttgaaattcatcaaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaat |
732 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||| | |
|
|
| T |
2124459 |
ttacacaaacatttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aaattaagt |
2124552 |
T |
 |
| Q |
733 |
ctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgt |
832 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||| || |
|
|
| T |
2124553 |
ccctacttacattcaacgcaattgcatatggaacgaaaatacatatataatatattatcttccaccatattccgaaacataaatccaaagtcgctattgt |
2124652 |
T |
 |
| Q |
833 |
cgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2124653 |
cgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcgtctc |
2124703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 578 - 883
Target Start/End: Complemental strand, 22588305 - 22588006
Alignment:
| Q |
578 |
cataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacat |
677 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||||| | |
|
|
| T |
22588305 |
cataaacaagaaaaatacaatatcttttacaattatccataattaaatcaaaccgacattaggttcaaattacacaaacgtttgaaattgatcaaaacgt |
22588206 |
T |
 |
| Q |
678 |
tacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacata |
777 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22588205 |
tacaaagtgtccataattaaacaactcattacacatcattaaattaaa------tccctacttacattcaacgcaattgcatatagaacgaacatacata |
22588112 |
T |
 |
| Q |
778 |
tataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtatt |
877 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22588111 |
tataatatattatcttccaccatatttcaaaacataaatccgacgtcgctatcgtcttcaattagccaagacatatagcttgccgttttccatgcgtatt |
22588012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 440 - 768
Target Start/End: Complemental strand, 20549259 - 20548938
Alignment:
| Q |
440 |
gaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattt |
539 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| || |||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
20549259 |
gaggaaaactgattatgcagacagcaagttctgcataattctaaacatttccaagccatcatt-cggccagtttttacctgtaattaaaccagagcattt |
20549161 |
T |
 |
| Q |
540 |
tcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg |
639 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
20549160 |
ccaaagacaaaataattcatacaagattgaaactcggatataaacaagataaatacaatatcttttacaattgttcataattaaattaaaccgaaatttg |
20549061 |
T |
 |
| Q |
640 |
gttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctact |
739 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
20549060 |
gttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattacacatcattaaat------taaatccttact |
20548967 |
T |
 |
| Q |
740 |
tacattcaacgcaattgcatatggaacga |
768 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
20548966 |
tacattcaacgcaattgcatatggaacga |
20548938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 453 - 860
Target Start/End: Complemental strand, 4867791 - 4867380
Alignment:
| Q |
453 |
tatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaa |
551 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||||||| |||||||| ||||| ||||||| ||||||||||| ||| ||||| ||||||||| | |
|
|
| T |
4867791 |
tatgcagacagtgggttttgcataattctaaagcatttccaagccatttttt-ggccagtttttacttgtaattaaactagagcatttccaaaggcaata |
4867693 |
T |
 |
| Q |
552 |
taattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaca |
651 |
Q |
| |
|
||| ||||||||| || |||||||| ||||||||||| ||||||||||||||| || ||||||||||||||||| ||||| ||||||| || ||| |||| |
|
|
| T |
4867692 |
taactcatacaacatttaaactcagtcataaacaagaaaaatacaatatctttcaccattgtccataattaaatcaaaccaacatttgatttaaaataca |
4867593 |
T |
 |
| Q |
652 |
caaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaattaaatctctacttacattca |
747 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| ||||| |||||||||| |||||| |||||| | | |||||||||| ||||||||||||| |
|
|
| T |
4867592 |
caaaagtttgaaattcatcaaaacattacatagtctccataattaaacaacagattacaactcattacttatcattaaattaaatccctacttacattca |
4867493 |
T |
 |
| Q |
748 |
acgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaag |
847 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||| |||| || |||||||||||| |
|
|
| T |
4867492 |
acgcaattggatatggaacgaacatacgtatataatatattattttccaccataatccgaaacataaatccgacgtcgttatcatctcgaataagccaat |
4867393 |
T |
 |
| Q |
848 |
gcatatagcttgc |
860 |
Q |
| |
|
||| |||| |||| |
|
|
| T |
4867392 |
gcacataggttgc |
4867380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 590 - 883
Target Start/End: Complemental strand, 7172178 - 7171881
Alignment:
| Q |
590 |
aaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtcc |
689 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||| |||||||| ||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
7172178 |
aaatacaatatcttttacaattgtccataattaaatcaaacccacattttgttcaaaatacacaaaagtttgaaattcatgaaaacgttacatagtgtcc |
7172079 |
T |
 |
| Q |
690 |
atgattaaacaactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatat |
785 |
Q |
| |
|
|| |||||||||| ||||||| ||| || | | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
7172078 |
ataattaaacaacacattacaactcagtacacatcattaaattaaatctctacttacattcaatgcaattgcatatggaacgaacatacatatataatat |
7171979 |
T |
 |
| Q |
786 |
attatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7171978 |
attattttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccattttccatgcgtattcatctc |
7171881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 452 - 787
Target Start/End: Original strand, 39751144 - 39751473
Alignment:
| Q |
452 |
ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
||||||||||||||| ||||||||| || ||| |||||||||| ||||||| ||||| |||||| || ||||||||||||| ||||| ||||| ||| |
|
|
| T |
39751144 |
ttatgcagacagtggattctgcatatttataatgcatttccaagctatttttt-ggccagtttttaactataattaaaccagagcatttccaaagacaat |
39751242 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||| ||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||| |||||| ||||||||| |||| ||||||||||| ||||||| |
|
|
| T |
39751243 |
ataaatcatacaacattgaaactcggtcataaccaagaaaaatacaatatcttttacagttgtccgtaattaaatcaaactgacatttggttcaaattac |
39751342 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacg |
750 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
39751343 |
acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacg |
39751436 |
T |
 |
| Q |
751 |
caattgcatatggaacgaacatacatatataatatat |
787 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
39751437 |
taattgcatatggaacgaacatacatatataatatat |
39751473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 511 - 883
Target Start/End: Complemental strand, 22661504 - 22661138
Alignment:
| Q |
511 |
tttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaat |
610 |
Q |
| |
|
||||||||||||||| ||| ||| ||||| |||||||| || | | |||||| || | |||||| ||||||||||| ||||||| |||||||||| | |
|
|
| T |
22661504 |
tttttacctgtaattcaactagagcatttccaaaggcattattagttgtacaacatttatactcagtcataaacaagaaaaatacattatcttttacggt |
22661405 |
T |
 |
| Q |
611 |
tgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattaca |
710 |
Q |
| |
|
||||||||||||||| ||||||| |||| ||||||||||||| || |||||| |||||||||||||||| | ||||||||| |||||||||| ||||||| |
|
|
| T |
22661404 |
tgtccataattaaatcaaaccgatatttcgttaaaattacacgaatgtttgagattcatcaaaacattaaagagtgtccataattaaacaacacattaca |
22661305 |
T |
 |
| Q |
711 |
catcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaac |
810 |
Q |
| |
|
||| |||||||||| |||||||| |||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
22661304 |
tatcgttaaattaaa------tctctactgacattctgcgcagttgcatatggaacgaacatacatatataatatatcatcttccaccatattccgaaac |
22661211 |
T |
 |
| Q |
811 |
ataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||| | |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
22661210 |
atagacccgacgtcgctatcgtcgtgaataagccaaggcatatggcttgccgttttccatgcatattcatctc |
22661138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 394 - 671
Target Start/End: Original strand, 34366937 - 34367214
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttcca |
492 |
Q |
| |
|
|||| |||||||||||| |||| ||||| ||||||||||||||| || ||| |||||||||||| ||||| | ||||||| |||||||| |||||||| |
|
|
| T |
34366937 |
tccggctgcagttaacttccgaggaaaacctcggtagttaactgccgatgaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttcca |
34367036 |
T |
 |
| Q |
493 |
agtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaa |
592 |
Q |
| |
|
|| | |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
34367037 |
agcc-ttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacagcattgaaactcggacataaacaagataaa |
34367135 |
T |
 |
| Q |
593 |
tacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
34367136 |
tacaatatcttttacaattgtccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaattcatca |
34367214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 429 - 666
Target Start/End: Original strand, 41743925 - 41744162
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| || ||| ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| |||||||||| |
|
|
| T |
41743925 |
agttaactgccgaagaaaactaattatgcagacagtgggttctgcataattttaaacatttccaagccattttttcggccagtttttacatgtaattaaa |
41744024 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| ||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
41744025 |
ccagagcatttccaaaggcaaaataatttatacaagattgaaactcgaacataaacaagataaatacaatattttttacaattgtccatgattaaattaa |
41744124 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaatt |
666 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
41744125 |
accgacatttggttcaaattacacaaacgtttgaaatt |
41744162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 724 - 883
Target Start/End: Original strand, 41744173 - 41744332
Alignment:
| Q |
724 |
aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgt |
823 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
41744173 |
aaattaagtccctacttacattcaacgcaattgcatatggagcgaatatacatatataatatattatcttccaccatattccgaaatataaatccgacgt |
41744272 |
T |
 |
| Q |
824 |
cgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
41744273 |
cgctatcgtcatgaataagccaaggcatataacttgtcgttttccatgcgtattcatctc |
41744332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 451 - 639
Target Start/End: Original strand, 23578517 - 23578705
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||| ||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
23578517 |
attatgcagacagtgggttctgcataattctaaagcatttccaaaccattttt-cagccagtttttacctgtaattaaaccagagcatttccaaaggcaa |
23578615 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg |
639 |
Q |
| |
|
|||| | ||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
23578616 |
tataaattatacaacattgaaactctgtcataaacaagaaaaatacaatatcttttacaattgttcataattaaatcaaaccgacatttg |
23578705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 452 - 670
Target Start/End: Original strand, 41238932 - 41239150
Alignment:
| Q |
452 |
ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
||||||| ||||| | ||||||| |||||||| ||| |||||| ||||||| | | || |||| ||||||||||||| |||| ||||| ||| ||||| |
|
|
| T |
41238932 |
ttatgcaaacagtaagctctgcatgattctaaaacatgtccaagccattttt-cagtcagttttaacctgtaattaaagcagagcatttcgaaatgcaaa |
41239030 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||| |
|
|
| T |
41239031 |
ataattcatacaacattgaatctcggacataaacaagacaaatacaatatcttttacaattgttcataattaaatcaaaccgacatttgattcaaattac |
41239130 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatc |
670 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
41239131 |
acaaacgtttgaaattcatc |
41239150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 535 - 802
Target Start/End: Complemental strand, 30972780 - 30972519
Alignment:
| Q |
535 |
cattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgac |
634 |
Q |
| |
|
|||||||| |||||| | || ||||||| | || | |||||| ||||||||||| ||||||| |||||||||| ||||| |||||||||| || | || |
|
|
| T |
30972780 |
cattttcagaggcaatacaactcatacatcatttatactcagtcataaacaagaaaaatacattatcttttacggttgtcgataattaaatcaattcaac |
30972681 |
T |
 |
| Q |
635 |
atttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatct |
734 |
Q |
| |
|
|||| ||||||||||||| || ||||||||||||||||||||||||| ||| | ||| |||||||||| |||||||||||||| | || |||| | |
|
|
| T |
30972680 |
atttcgttaaaattacacgaatgtttgaaattcatcaaaacattacagagtatacataattaaacaacacattacacatcatt------acataaaatat |
30972587 |
T |
 |
| Q |
735 |
ctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatat |
802 |
Q |
| |
|
||| |||||| ||||| |||| ||||||| |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
30972586 |
ctatcgacattctacgcatgtgcaaatggaacaaacacacatatataatatattatcttcaaccatat |
30972519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 779 - 878
Target Start/End: Original strand, 39751659 - 39751758
Alignment:
| Q |
779 |
ataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc |
878 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
39751659 |
ataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagtttgccgttttccatgcgtattc |
39751758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 429 - 551
Target Start/End: Complemental strand, 1116226 - 1116105
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
1116226 |
agttaactgccgagaaaaactgattatgcagacagagggttctgcataattctaaacaattccaagccattttttcggcca-gttttacctgtaattaaa |
1116128 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaa |
551 |
Q |
| |
|
||||| ||||| ||||||||||| |
|
|
| T |
1116127 |
ccagagcatttccaaaggcaaaa |
1116105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 500 - 869
Target Start/End: Original strand, 31280942 - 31281305
Alignment:
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||| ||||| || || ||| | || ||||||| | || | | || | ||||||||||| |||||| | |
|
|
| T |
31280942 |
ttttcggcctatttttacctgtaattcaaccagagcatttccagagacaatacaactcatacaccatttataatcggtcataaacaagaacaatacataa |
31281041 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaatt--acacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
||||||||||||| | ||||||||| || | ||||||| ||||||||| |||| || |||||||||||||||||| |||| | |||| ||||| |
|
|
| T |
31281042 |
tcttttacaattgactgtaattaaatcaatctgacatttcgttaaaattttacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaa |
31281141 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac |
797 |
Q |
| |
|
||||| ||||||| ||||||| || | | | ||| |||||| ||||| |||| |||||||||||||| | |||||||||||||||||| || |
|
|
| T |
31281142 |
acaacacattacatatcattacataagatatttatca------acattctacgcacgtgcagatggaacgaacataaagatataatatattatcttcaac |
31281235 |
T |
 |
| Q |
798 |
catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcca |
869 |
Q |
| |
|
|||||||| |||||||||||| |||| |||||||| |||||||||||| || |||| | ||||||||||| |
|
|
| T |
31281236 |
catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttataaatcgccgttttcca |
31281305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 447 - 587
Target Start/End: Complemental strand, 7172607 - 7172465
Alignment:
| Q |
447 |
actgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggcca--ttttttacctgtaattaaaccagaccattttcaa |
543 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| | || |||||||| ||||||||||||||| ||||||||| |
|
|
| T |
7172607 |
actgattatgcagacagtggcttctgcataattctaaagcatttccaagccgttttt-caacctgtttttttacttgtaattaaaccagagcattttcaa |
7172509 |
T |
 |
| Q |
544 |
aggcaaaataattcatacaacgttgaaactcagacataaacaag |
587 |
Q |
| |
|
|||||| |||| | ||||||| || ||||| || |||||||||| |
|
|
| T |
7172508 |
aggcaatataacttatacaacatttaaacttagtcataaacaag |
7172465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 310 - 436
Target Start/End: Complemental strand, 44052358 - 44052231
Alignment:
| Q |
310 |
gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa |
408 |
Q |
| |
|
||||||||||||||||||||| | | | ||||| |||||||||| ||||||||| || | ||||||| | | ||||||||| | |||| ||||||||| |
|
|
| T |
44052358 |
gttgttcccacattacataaggttgtggcacacgagtaaatgacgtttttgccccctcggtagttaattgccgaggaatttgcaatccggctgcagttac |
44052259 |
T |
 |
| Q |
409 |
ctgccgaagaaaatctcggtagttaact |
436 |
Q |
| |
|
|| |||| ||||| |||||||||||||| |
|
|
| T |
44052258 |
ctaccgaggaaaacctcggtagttaact |
44052231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 337 - 445
Target Start/End: Complemental strand, 35966853 - 35966745
Alignment:
| Q |
337 |
cacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaact |
436 |
Q |
| |
|
||||| |||||| ||| |||||||| || | ||||||| | | ||||||||||| ||||||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
35966853 |
cacactagtaaaatacaattttgccccctcggcagttaactgccgaggaatttgaaatccgactgcagttaattgtcgaagaaatcctcggtagttaact |
35966754 |
T |
 |
| Q |
437 |
gttgaggaa |
445 |
Q |
| |
|
|| |||||| |
|
|
| T |
35966753 |
gtagaggaa |
35966745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 492
Target Start/End: Complemental strand, 17924323 - 17924232
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttcca |
492 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||||| ||||||| |
|
|
| T |
17924323 |
gcagttaactgccgagaaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggtcctgcataattctaagtatttcca |
17924232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 41743877 - 41743943
Alignment:
| Q |
355 |
ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaa |
421 |
Q |
| |
|
|||||||| || |||||||||| | | ||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
41743877 |
ttttgccccctcgatagttaactgccgaggaatttgaaatccggctgcagttaactgccgaagaaaa |
41743943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 437
Target Start/End: Original strand, 39601649 - 39601773
Alignment:
| Q |
314 |
ttcccacattacataag-ctcggccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgc |
412 |
Q |
| |
|
||||||||||||||||| || ||||||| |||||||||| ||||| || ||| || ||||||| | | | | || ||| |||| |||||||||||||| |
|
|
| T |
39601649 |
ttcccacattacataaggctgtgccacacgagtaaatgacgtttttaccttctcgacagttaactgccgaagttttagaaatccggctgcagttaactgc |
39601748 |
T |
 |
| Q |
413 |
cgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||| ||||| ||||| ||||||||| |
|
|
| T |
39601749 |
cgaggaaaacctcgggagttaactg |
39601773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 451 - 529
Target Start/End: Complemental strand, 22588389 - 22588311
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaac |
529 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||| ||| ||| |||||||| || |||||| ||||||| |||| |
|
|
| T |
22588389 |
attatgcagacagtgggttctgtataattctaaagcattttcaa-tcaatttttcggtcagtttttatctgtaatgaaac |
22588311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 40077297 - 40077254
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
40077297 |
tccgactgcagttaactgccgaggaaaacctcggtagttaactg |
40077254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 437
Target Start/End: Original strand, 1114760 - 1114812
Alignment:
| Q |
385 |
aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
1114760 |
aatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactg |
1114812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 22550912 - 22550869
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
22550912 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
22550869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 437
Target Start/End: Original strand, 41016444 - 41016483
Alignment:
| Q |
398 |
actgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
41016444 |
actgcagttaactgccgaggaaaacctcggtagttaactg |
41016483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 1116259 - 1116214
Alignment:
| Q |
370 |
agttaaccgtcaaggaatttgaattccgactgcagttaactgccga |
415 |
Q |
| |
|
||||||| ||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
1116259 |
agttaactgtcgaggaatttgaaatccggctgcagttaactgccga |
1116214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 438
Target Start/End: Complemental strand, 39491177 - 39491140
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgt |
438 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
39491177 |
gcagttaactgccgaggaaaatctcggaagttaactgt |
39491140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 41855399 - 41855436
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaact |
436 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
41855399 |
ctgcagttaactgccgaggaaaacctcggtagttaact |
41855436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 42602492 - 42602529
Alignment:
| Q |
400 |
tgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
42602492 |
tgcagttaactgccgaggaaaacctcggtagttaactg |
42602529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 333; Significance: 0; HSPs: 44)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 3408280 - 3407803
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||| | || |||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3408280 |
gcagttaactgccgaggaaaacctcggtagtaacttgccgaggaaaactgattatgtagacagtgggttctgcataattctaaacatttccaagccattt |
3408181 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
3408180 |
tttcggccagtttttacttgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggtcataatcaagataaatacaatat |
3408081 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac |
699 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
3408080 |
cttttacaattgttcataattaaattaaaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaac |
3407981 |
T |
 |
| Q |
700 |
aactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacca |
799 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3407980 |
tactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacca |
3407887 |
T |
 |
| Q |
800 |
tattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3407886 |
tattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgtgtattcatctc |
3407803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 440 - 882
Target Start/End: Complemental strand, 37395218 - 37394768
Alignment:
| Q |
440 |
gaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattt |
539 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
37395218 |
gaggaaaactgattatgcagacagtgggttctgcataattctaaacattttcaagccattttttcggccagtttttacctgtaattaaaccagagcattt |
37395119 |
T |
 |
| Q |
540 |
tcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg |
639 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37395118 |
ccaaaggaaaaataattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg |
37395019 |
T |
 |
| Q |
640 |
gttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgt--------------ccatgattaaacaactcattacacatcattaaattaaa |
725 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| || |
|
|
| T |
37395018 |
attcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aa |
37394925 |
T |
 |
| Q |
726 |
attaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcg |
825 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
37394924 |
attaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcg |
37394825 |
T |
 |
| Q |
826 |
ctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct |
882 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
37394824 |
ctatcgtcgcgaataagccaaggcatacaacttgccgttttccatgcgtattcatct |
37394768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 19069201 - 19069709
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| | |
|
|
| T |
19069201 |
aggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattgt |
19069299 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| |||||||||| ||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
19069300 |
aaacatttccaagccattttttcgaccagtttttacttgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata |
19069399 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca------------- |
668 |
Q |
| |
|
| ||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
19069400 |
atgaagataagtaaaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaattaaacta |
19069499 |
T |
 |
| Q |
669 |
-tcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacg |
767 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
19069500 |
ctcaaaacattacaaagtgtccataattaaactactcattgcacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacg |
19069593 |
T |
 |
| Q |
768 |
aacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttc |
867 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19069594 |
aacatacatgtataatatattatcttccaccatattccgaaacataaacccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttc |
19069693 |
T |
 |
| Q |
868 |
catgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
19069694 |
catgcgtattcatctc |
19069709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 49563873 - 49564351
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| | ||| || ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
49563873 |
gcagttaactgccgaggaaaacctcggtagttaacggccgagaaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
49563972 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
49563973 |
tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
49564072 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
|| |||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
49564073 |
atattttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
49564172 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
49564173 |
ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
49564266 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49564267 |
atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
49564351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 403 - 883
Target Start/End: Complemental strand, 10423444 - 10422972
Alignment:
| Q |
403 |
agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatttt |
501 |
Q |
| |
|
||||||||||||| |||| || |||||||||||| |||||| || ||||||||||||||||||| ||||||| |||||| || ||||||| |||||| |
|
|
| T |
10423444 |
agttaactgccgaggaaatcctaggtagttaactgccgaggaaaaca-attatgcagacagtgggttttgcataaatctaaagcaattccaagccatttt |
10423346 |
T |
 |
| Q |
502 |
ttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatc |
601 |
Q |
| |
|
| |||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||| |||| |
|
|
| T |
10423345 |
t-cggccagtttttacctgtaattaaaccagagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaataca-tatc |
10423248 |
T |
 |
| Q |
602 |
ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaa |
701 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
10423247 |
ttttacaattgtccataattaaattaaaccgacattaggttcaaattacacaaacgtttgaaattcatcaaaacgttacaatgtgtccataattaaacaa |
10423148 |
T |
 |
| Q |
702 |
ctcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccata |
801 |
Q |
| |
|
||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10423147 |
ctcattacatatcatt------agattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccata |
10423054 |
T |
 |
| Q |
802 |
ttctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||| |||||| |||| |
|
|
| T |
10423053 |
ttccgaaacataaatccgacgtcgcaatcgccgcgaataagccaagacatatagcttgtcgttttccatgtgtattcgtctc |
10422972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 38460457 - 38460934
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||| ||||||| |||||| || ||||||||| |||||||||||||||||||||||| |||||||||| || |
|
|
| T |
38460457 |
ctgcagttaactgtcgaggaaaacctcggtaattaactgccgaggaaaaca-attatgcagtcagtgggttctgcataattctaaagcatttccaagcca |
38460555 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
||||| ||| || ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||| || |
|
|
| T |
38460556 |
ttttt-cggtcagtttttacctgtaattaaaccagagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatataa |
38460654 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
38460655 |
tatcttttacaattgtccataattaaattaaaccgacatttgattcaaattacacaaaagtttgaaattcatcaaaatgttacaaagtgtccataattaa |
38460754 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac |
797 |
Q |
| |
|
|||||||||||||||| ||| | |||||||| ||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||| |||||| |
|
|
| T |
38460755 |
acaactcattacacatgatt------atattaaatccctacttacattcatcacaattgcatatgcaacaaacatacatatataatatattattttccac |
38460848 |
T |
 |
| Q |
798 |
catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
38460849 |
catattctgaaacataaatccaacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgcattcatctc |
38460934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 399 - 877
Target Start/End: Complemental strand, 44051134 - 44050650
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
|||||||||||| |||| |||| ||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
44051134 |
ctgcagttaactcccgaggaaatcctcggtagttaactgccgaggaaaaca-attatgcaaacagtgggttctgcataattctaaagcatttccaagcca |
44051036 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
||||| |||||| ||||||| ||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| |||||||| |
|
|
| T |
44051035 |
ttttt-cggccagtttttacttgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaa |
44050937 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgt---------- |
687 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
44050936 |
tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa |
44050837 |
T |
 |
| Q |
688 |
----ccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataat |
783 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44050836 |
gtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttgcattcaacgcaattgcatatggaacgaacatacatatataat |
44050743 |
T |
 |
| Q |
784 |
atattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtatt |
877 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
44050742 |
atattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa-acatatagcttgttgttttccatgcgtatt |
44050650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 451 - 883
Target Start/End: Complemental strand, 4774604 - 4774168
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
|||||||||||||||| |||||||||||| | || |||||||||| ||||||| || | | ||||||||||||||| ||||||| ||||| ||||| ||| |
|
|
| T |
4774604 |
attatgcagacagtggtttctgcataattgttaagcatttccaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaagccaa |
4774506 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| | ||||||| || |||||||| ||||| |||| |||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||| || |
|
|
| T |
4774505 |
tataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaatcgacatttggttcaaaata |
4774406 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaattaaatctctacttacatt |
745 |
Q |
| |
|
|||||| ||||||||||||| ||| | ||||| |||||||||| |||||||| ||||||| |||||| | | |||||||||| |||||||||| |
|
|
| T |
4774405 |
cacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatg |
4774306 |
T |
 |
| Q |
746 |
caacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcca |
845 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4774305 |
caacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagcca |
4774206 |
T |
 |
| Q |
846 |
aggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4774205 |
agccatatagcttgccgttttccatgcgtattcatctc |
4774168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 569 - 883
Target Start/End: Original strand, 10374240 - 10374548
Alignment:
| Q |
569 |
aaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca |
668 |
Q |
| |
|
|||||| | ||||| ||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10374240 |
aaactcggtcataaccaagaaaaatacaataccttttacagttgtccataattaaatgaaaccgacatttggttcaaattacacaaacgtttgaaattca |
10374339 |
T |
 |
| Q |
669 |
tcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacga |
768 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
10374340 |
tcaaaacattacaaggtgtccataattaaacaactcattacacatcattaaattaaa------tccctacttacattcaacgcaattgcatatggaacga |
10374433 |
T |
 |
| Q |
769 |
acatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcc |
868 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10374434 |
acatacatatataatatattatcttccaccatatttcgaaacataaatctgatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcc |
10374533 |
T |
 |
| Q |
869 |
atgcgtattcatctc |
883 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
10374534 |
atgcgtattcgtctc |
10374548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 452 - 883
Target Start/End: Original strand, 18578706 - 18579141
Alignment:
| Q |
452 |
ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
||||||||||||||| |||||||||||| | || |||||||||| ||||||| |||| | ||||||| ||||||| ||||||| |||| ||||||||| |
|
|
| T |
18578706 |
ttatgcagacagtggattctgcataattgttaagcatttccaagccattttt-cggctagtttttacttgtaattcaaccagagtatttccaaaggcaat |
18578804 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||| | ||||||| || ||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| || ||| ||| |
|
|
| T |
18578805 |
ataacttatacaacatttaaactcactcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttgattcaaaatac |
18578904 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattc |
746 |
Q |
| |
|
||||| |||||||||||||||||| ||||| ||||||||| |||||||||| ||||||| |||||| | | |||||||||| || ||||||||| |
|
|
| T |
18578905 |
acaaaagtttgaaattcatcaaaatgttacatagtgtccataattaaacaacacattacaactcattacacatcattaaattaaatcacttcttacattc |
18579004 |
T |
 |
| Q |
747 |
aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa |
846 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||| |||||| |
|
|
| T |
18579005 |
aacgcaattgcatatagaactaacatacatatataatatattatcttctaccatattccgaaacataaattcgacgtcgctatcgtcttcaattagccaa |
18579104 |
T |
 |
| Q |
847 |
ggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18579105 |
ggcatatagcttgccgttttccatgcgtattcatctc |
18579141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 382 - 673
Target Start/End: Original strand, 15995736 - 15996026
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
15995736 |
aggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattct |
15995834 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| || |||||| |
|
|
| T |
15995835 |
aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaagtcggacata |
15995934 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaa |
673 |
Q |
| |
|
| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15995935 |
atgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa |
15996026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 457 - 791
Target Start/End: Complemental strand, 50905147 - 50904819
Alignment:
| Q |
457 |
cagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataat |
555 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||| ||| |||| |||| |
|
|
| T |
50905147 |
cagacagtgagttctgcataattctaatgcatttccaagccattttt-cggccaatttttacctgtaattaaaccagagcatttctaaatgcaatataaa |
50905049 |
T |
 |
| Q |
556 |
tcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaa |
655 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||| |
|
|
| T |
50905048 |
tcatacaacattgaaactcgaacataaacaagaaaaatatgaaatcttttacaattgtccataattaaatcaaaccgacattttgttcaaattacacaaa |
50904949 |
T |
 |
| Q |
656 |
cgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaatt |
755 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| ||||||||| ||||| ||||||||||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
50904948 |
cgtttgaaattcatcaaaacgatacaaagtgttcataattaaacaattcatttcacatcattaaat------taaatccctacttacattcaacacaatt |
50904855 |
T |
 |
| Q |
756 |
gcatatggaacgaacatacatatataatatattatc |
791 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
50904854 |
gcatatggaacaaacatacaaatataatatattatc |
50904819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 310 - 671
Target Start/End: Original strand, 51492013 - 51492374
Alignment:
| Q |
310 |
gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa |
408 |
Q |
| |
|
||||||||||||||||||||| | | ||||||| |||||||||| ||||||| ||| | | ||||| ||| | | || ||| |||| |||||||||| |
|
|
| T |
51492013 |
gttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgct-tctcggcaattaactgtcgaagttttagaaatccggctgcagttaa |
51492111 |
T |
 |
| Q |
409 |
ctgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggc |
507 |
Q |
| |
|
||||| | ||||| ||||||||||||||| |||||| |||||||||||| ||||| | ||||||| |||||||| |||||||||| | ||||||| || |
|
|
| T |
51492112 |
ctgcctaggaaaacctcggtagttaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaagcc-ttttttcagc |
51492210 |
T |
 |
| Q |
508 |
cattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttac |
607 |
Q |
| |
|
|| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
51492211 |
cagattttacctgtaattaaaccagagcatttcgaaaggcaaaataattcatacaacattaaaactcgaacataaacaagataagtacaatatcttttac |
51492310 |
T |
 |
| Q |
608 |
aattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
51492311 |
aattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca |
51492374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 602 - 883
Target Start/End: Original strand, 24415392 - 24415679
Alignment:
| Q |
602 |
ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaa |
701 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||| ||||||||| ||||||||| |
|
|
| T |
24415392 |
ttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaa |
24415491 |
T |
 |
| Q |
702 |
ctcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac |
797 |
Q |
| |
|
| ||||||| |||||| || | |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
24415492 |
cacattacaactcattacatatcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattattttccat |
24415591 |
T |
 |
| Q |
798 |
catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc--atatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||| |||||||||| | |||||||||||||| |||||| |||||| |||||||||| ||||||||||| ||||||||||| |
|
|
| T |
24415592 |
catattccgaaacataaatgcaacgtcgctatcgtcttcaataagtcaaggcatatatagcttgtcgttttccatgtgtattcatctc |
24415679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 401 - 671
Target Start/End: Original strand, 37015931 - 37016201
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatt |
499 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||| || |||||| || ||||| | ||||||| |||||||| ||||| |||||| || |
|
|
| T |
37015931 |
gcagttaactgccgaggaaaacttcggtagttaactgcccaggaaatctaattatggaggcagtgagctctgcatcattctaaaacattttcaagtc-tt |
37016029 |
T |
 |
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||| | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
37016030 |
ttttcagccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacatcattgaaactcggacataaacaagataaatacaata |
37016129 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||| |||| || |||||||| ||||||||||||||||||| |
|
|
| T |
37016130 |
tcttttacaattgtccataattaaatcaaactgacgtttgattcaaattacagaaacgtttgaaattcatca |
37016201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 527 - 781
Target Start/End: Original strand, 51642165 - 51642423
Alignment:
| Q |
527 |
aaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatt |
626 |
Q |
| |
|
||||||| ||||||||||||||| |||| |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
51642165 |
aaccagagcattttcaaaggcaatataaatcatacaatattgaaactcgatcataaacaagaaaaatacaatatcttttacaattgtccataattaaatc |
51642264 |
T |
 |
| Q |
627 |
aaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----t |
722 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||||||| ||||||| |||||| || | |
|
|
| T |
51642265 |
aaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaattgtccataattaaacaacacattacaactcattacatatcat |
51642364 |
T |
 |
| Q |
723 |
aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata |
781 |
Q |
| |
|
|| ||||||| | ||||||||||| | ||||| ||||| ||||||||||||||||||| |
|
|
| T |
51642365 |
taagttaaatcccaacttacattcatcacaattacatatagaacgaacatacatatata |
51642423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 511 - 856
Target Start/End: Original strand, 6186789 - 6187140
Alignment:
| Q |
511 |
tttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata--aacaagataaatacaatatcttttaca |
608 |
Q |
| |
|
||||||||||||||| ||||| | ||||| | ||||||| | | || |||||| || | |||||| |||| ||||||| ||||||| ||||||||| | |
|
|
| T |
6186789 |
tttttacctgtaattcaaccaaagcatttccgaaggcaatactagtcgtacaacatttatactcagtcatataaacaagaaaaatacattatcttttata |
6186888 |
T |
 |
| Q |
609 |
attgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcatta |
708 |
Q |
| |
|
| ||| |||||||||| || ||||||||| ||||||||||||| | ||||||||||||||||||||||| | |||||||| |||||||||| ||||| |
|
|
| T |
6186889 |
gtagtcaataattaaatcaatccgacatttcgttaaaattacacgtatgtttgaaattcatcaaaacattaaagggtgtccataattaaacaacacatta |
6186988 |
T |
 |
| Q |
709 |
ca-catcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatt |
803 |
Q |
| |
|
|| ||| |||| || | |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6186989 |
caacat-attacatatcattaaattaaatctctactgacattctacgcatttgcatatggaacgaacatacatatataatatattatcttccaccatatt |
6187087 |
T |
 |
| Q |
804 |
ctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagc |
856 |
Q |
| |
|
|||||||||||| | ||||||||||||| |||||||||||| || ||||| |
|
|
| T |
6187088 |
gctaaacataaatccaatgtcgctatcgtcgtgaataagccaagacacatagc |
6187140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 429 - 671
Target Start/End: Complemental strand, 50278836 - 50278593
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaac-atttccaagtcattttttcggccattttttacctgtaattaa |
527 |
Q |
| |
|
||||||||| |||||| || ||||||||||||||| | ||||||| |||||||| |||| |||| |||||||||| || ||||||||||||||||| |
|
|
| T |
50278836 |
agttaactgccgaggaaaacaaattatgcagacagtgagctctgcatgattctaaaatattttcaagccattttttcgatcagtttttacctgtaattaa |
50278737 |
T |
 |
| Q |
528 |
accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta |
627 |
Q |
| |
|
| |||| ||||| |||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||||||| | |
|
|
| T |
50278736 |
aacagagcatttcgaaaggcaaaataatctatacaacattgaaactcggacataaacaagaaaaatacaatatcttttacaattattcataattaaatca |
50278637 |
T |
 |
| Q |
628 |
aaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
50278636 |
aaccgacatttggttgaaattacacaaacgtttgaaattcatca |
50278593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 429 - 671
Target Start/End: Original strand, 44674199 - 44674440
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa |
527 |
Q |
| |
|
||||||||| |||||| |||||||||||| ||||| | ||||||| |||||||| |||||||||| | |||||| ||||| |||| ||||||||||| |
|
|
| T |
44674199 |
agttaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaagccttttttt-ggccagttttc-cctgtaattaa |
44674296 |
T |
 |
| Q |
528 |
accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta |
627 |
Q |
| |
|
| |||| ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| | |
|
|
| T |
44674297 |
atcagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataagtacaatatcttttacaattgtccataattaaatca |
44674396 |
T |
 |
| Q |
628 |
aaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||| |||||||||| |
|
|
| T |
44674397 |
aaccgacatttggttcaaattacacaaacatttaaaattcatca |
44674440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 726 - 883
Target Start/End: Complemental strand, 11506815 - 11506658
Alignment:
| Q |
726 |
attaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcg |
825 |
Q |
| |
|
|||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
11506815 |
attaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaacataaatccgacgtcg |
11506716 |
T |
 |
| Q |
826 |
ctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11506715 |
ctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctc |
11506658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 500 - 848
Target Start/End: Complemental strand, 30043373 - 30043022
Alignment:
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
|||||| ||| ||||||| || |||| ||||||| ||||| | |||||| | |||| |||||| || | ||| || ||||||||||| |||| | || |
|
|
| T |
30043373 |
ttttcgaccagtttttacatgaaattcaaccagagcatttcaagaggcaatactattcgtacaacatttatactaagtcataaacaagaaaaatgtatta |
30043274 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac |
699 |
Q |
| |
|
|||||||||||| ||||||||||||| || ||||| | ||||||||||||| | |||||||||| |||||||||||| | |||| |||| ||||||| |
|
|
| T |
30043273 |
tcttttacaattatccataattaaatcaatccgacgtagagttaaaattacacggatgtttgaaatttatcaaaacattaaagagtg-ccataattaaac |
30043175 |
T |
 |
| Q |
700 |
aactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcc |
795 |
Q |
| |
|
||| || |||| ||||| || | |||| |||||||| | |||||| | | | ||||| |||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
30043174 |
aacacactacaacacattacatatcgttaaatgaaatctctggtgacattctatgaagttgcaaatggaacgaaaatacaaatataatatattatcttcc |
30043075 |
T |
 |
| Q |
796 |
accatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaagg |
848 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||| | ||||||||||||| |
|
|
| T |
30043074 |
accatattctgaaacataaatccgacgtcattatcgccctgaataagccaagg |
30043022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 400 - 606
Target Start/End: Original strand, 24414867 - 24415072
Alignment:
| Q |
400 |
tgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcat |
498 |
Q |
| |
|
||||||||||||| || |||| ||||||||||||| |||| |||| || |||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
24414867 |
tgcagttaactgctgagtaaaacctcggtagttaacggttggggaaaaca-attatgcagacagtgggttctgcataattctaaagcatttccaagccat |
24414965 |
T |
 |
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
|| | ||| || ||||||||||||||||||||||| ||||| ||||| || |||| ||| | ||| || ||||||| ||||| ||||| ||||||||| |
|
|
| T |
24414966 |
ttat-cggacagtttttacctgtaattaaaccagaacatttccaaagataatataactcagaaaacatttaaactcaatcataagcaagaaaaatacaat |
24415064 |
T |
 |
| Q |
599 |
atctttta |
606 |
Q |
| |
|
|| ||||| |
|
|
| T |
24415065 |
atttttta |
24415072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 1041949 - 1042004
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
1041949 |
aggaattagaaatccgactgcagttaactgccgagaaaaatctcggtagttaactg |
1042004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 9890008 - 9890063
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
9890008 |
aggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactg |
9890063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 437
Target Start/End: Original strand, 33383774 - 33383874
Alignment:
| Q |
337 |
cacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaact |
436 |
Q |
| |
|
||||| |||||| ||||||||||| ||| | ||||||| ||| |||| ||| || ||||||||||||||||||||| ||||| ||||| |||||||| |
|
|
| T |
33383774 |
cacacaagtaaaatacatttttgccttctcggtagttaattgtcgaggattttaaaaaccgactgcagttaactgccgaggaaaacctcggaagttaact |
33383873 |
T |
 |
| Q |
437 |
g |
437 |
Q |
| |
|
| |
|
|
| T |
33383874 |
g |
33383874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 55407840 - 55407797
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
55407840 |
tccggctgcagttaactgccgaggaaaatctcggtagttaactg |
55407797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 19073713 - 19073659
Alignment:
| Q |
383 |
ggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
19073713 |
ggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactg |
19073659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 28081484 - 28081534
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgagga |
444 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||||| ||| ||||| |
|
|
| T |
28081484 |
tccgactgcagttaactgccgaggaaaatctcgttagttaagtgtcgagga |
28081534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 15999855 - 15999803
Alignment:
| Q |
385 |
aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||| |||| ||||| ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
15999855 |
aatttgaaatccggctgcaattaactgccgaggaaaacctcggtagttaactg |
15999803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 21018067 - 21018103
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
21018067 |
gcagttaactgccgaagaaaacctcggtagttaactg |
21018103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 26792284 - 26792248
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26792284 |
gcagttaactgccgaggaaaatctcggtagttaactg |
26792248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 40354638 - 40354674
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
40354638 |
gcagttaactgccgaagaaaacctcggtagttaactg |
40354674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 6178157 - 6178114
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
6178157 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
6178114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 49094110 - 49094153
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
49094110 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
49094153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 355 - 445
Target Start/End: Original strand, 8109378 - 8109468
Alignment:
| Q |
355 |
ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaa |
445 |
Q |
| |
|
|||| ||| |||| |||||||| ||| ||||||| | |||| || |||||||||||||| ||||| ||||| ||||||||| ||||||| |
|
|
| T |
8109378 |
ttttacccccttggtagttaactgtcgaggaattaaatatccggctacagttaactgccgaggaaaacctcgggagttaactgctgaggaa |
8109468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 382 - 420
Target Start/End: Complemental strand, 9491318 - 9491280
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaa |
420 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
9491318 |
aggaatttgaaatccggctgcagttaactgccgaagaaa |
9491280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 11494574 - 11494612
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
11494574 |
ctgcagttaactgccgaggaaaacctcggtagttaactg |
11494612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 20208541 - 20208579
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
20208541 |
ctgcagttaactgccgaggaaaacctcggtagttaactg |
20208579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 21022930 - 21022892
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
21022930 |
ctgcagttaactgccgaggaaaacctcggtagttaactg |
21022892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 337 - 415
Target Start/End: Original strand, 39588061 - 39588139
Alignment:
| Q |
337 |
cacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccga |
415 |
Q |
| |
|
||||| |||||||||| ||||||||| || | ||||||| | | ||||||| ||| | |||||||||||||||||||| |
|
|
| T |
39588061 |
cacacgagtaaatgacgtttttgccccctcggcagttaactgccgaggaattagaaattcgactgcagttaactgccga |
39588139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 39590610 - 39590572
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
39590610 |
ctgcagttaactgccgaggaaaacctcggtagttaactg |
39590572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 44561372 - 44561334
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
44561372 |
ctgcagttaactaccgaggaaaatctcggtagttaactg |
44561334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 958635 - 958598
Alignment:
| Q |
400 |
tgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
958635 |
tgcagttaactgccgaggaaaacctcggtagttaactg |
958598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 44674106 - 44674159
Alignment:
| Q |
310 |
gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccc |
362 |
Q |
| |
|
||||||||||||||||||||| | | ||||||| |||||||||| ||||||||| |
|
|
| T |
44674106 |
gttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc |
44674159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 327; Significance: 0; HSPs: 52)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 394 - 883
Target Start/End: Original strand, 48246438 - 48246920
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaa |
493 |
Q |
| |
|
|||| ||||||||||||| ||| ||||| ||||||||||||||| |||||| |||| |||||||||||||| || ||||||||||||||||||| ||| |
|
|
| T |
48246438 |
tccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaaactgtttatgcagacagtgtgtg-tgcataattctaaacattttcaa |
48246536 |
T |
 |
| Q |
494 |
gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat |
593 |
Q |
| |
|
| ||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| ||| |||||| |
|
|
| T |
48246537 |
gccatttttccggtcagtttttacctgtaattaaaccagagcattttcaaaggcaaaataattcataaaacattgaaactcagacataagcaatataaat |
48246636 |
T |
 |
| Q |
594 |
acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatga |
693 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | |
|
|
| T |
48246637 |
acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacttttgaaattcatcaaaaaattacaaagtgtccataa |
48246736 |
T |
 |
| Q |
694 |
ttaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
793 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
48246737 |
ttaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcagttgcatatggaacaaacatacatatataatatattatctt |
48246830 |
T |
 |
| Q |
794 |
ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
48246831 |
ccaccatattccgaaacataaatctgacgtcgccgtcgtcgcgaataagccaaagcatatagcttgtcgttttccatgcgtattcatctc |
48246920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 4002564 - 4002055
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||| ||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
4002564 |
aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcagacagcaagttctgcataattct |
4002465 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
4002464 |
aaacatttccaagccattttttcggcaagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata |
4002365 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca |
681 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4002364 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca |
4002265 |
T |
 |
| Q |
682 |
aag--------------tgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacg |
767 |
Q |
| |
|
||| ||||||| |||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
4002264 |
aagtgtctataactaagtgtccataattaaataactcattacacatcatt------aaattaaatccctacttacattcaacacaattgcatatggaacg |
4002171 |
T |
 |
| Q |
768 |
aacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttc |
867 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
4002170 |
aacatacatatataatatattattttccaccattttccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgtcgttttc |
4002071 |
T |
 |
| Q |
868 |
catgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
4002070 |
catgcgtattcatctc |
4002055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 13743328 - 13743775
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
13743328 |
agttaactgccgaggaaaactgattatgtagacagtgggttctgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaa |
13743427 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
| ||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13743428 |
ctagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaattaa |
13743527 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt |
728 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |
|
|
| T |
13743528 |
accgacatttggtt-aaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaatt |
13743620 |
T |
 |
| Q |
729 |
aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta |
828 |
Q |
| |
|
||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
13743621 |
aaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccg |
13743720 |
T |
 |
| Q |
829 |
tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13743721 |
tcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
13743775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 304; E-Value: 1e-170
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 6745366 - 6744890
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||| | ||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
6745366 |
gcagttaactgccaaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
6745267 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||||| ||||||||| ||||||| |||||||||||||||| |
|
|
| T |
6745266 |
tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagataaatacaatat |
6745167 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca |
700 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
6745166 |
cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaact |
6745067 |
T |
 |
| Q |
701 |
actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat |
800 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6745066 |
actcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat |
6744973 |
T |
 |
| Q |
801 |
attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6744972 |
attccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctc |
6744890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 448 - 883
Target Start/End: Original strand, 9426685 - 9427114
Alignment:
| Q |
448 |
ctgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaagg |
546 |
Q |
| |
|
||||||||||||| ||||||| |||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
9426685 |
ctgattatgcagatagtgggt-ctgcataattataaagcatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaagg |
9426783 |
T |
 |
| Q |
547 |
caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa |
646 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9426784 |
caaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaa |
9426883 |
T |
 |
| Q |
647 |
ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc |
746 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
9426884 |
ttaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattc |
9426977 |
T |
 |
| Q |
747 |
aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa |
846 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
9426978 |
aacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa |
9427077 |
T |
 |
| Q |
847 |
ggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9427078 |
ggcatatagtttgccgttttccatgcgtattcatctc |
9427114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 30943222 - 30943700
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
30943222 |
gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
30943321 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||| | || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
30943322 |
tttcggccagtttttacctgtaattaaaccagagcatttccaaaagtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
30943421 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30943422 |
atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
30943521 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
30943522 |
ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
30943615 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30943616 |
atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
30943700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 8156541 - 8157018
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
8156541 |
gcagttaactgccgaggaaaacctcggcagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
8156640 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
8156641 |
tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
8156739 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8156740 |
atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
8156839 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8156840 |
ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
8156933 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8156934 |
atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
8157018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 36812850 - 36813360
Alignment:
| Q |
382 |
aggaatttgaat-tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattc |
480 |
Q |
| |
|
||||||||||| |||| |||||||||||| |||| ||||| ||||||||| ||||| |||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
36812850 |
aggaatttgaaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgaggaaaactgattgtgcagacagcaaattctgcataattc |
36812949 |
T |
 |
| Q |
481 |
taaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat |
580 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||| ||||||| ||||||||| ||||| |
|
|
| T |
36812950 |
taaacatttccaagccattttttcggccagtttttacctgtagttaaaccagagcatttccaaaggcaaaataatccatacaagattgaaactcggacat |
36813049 |
T |
 |
| Q |
581 |
aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattac |
680 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
36813050 |
aaacaagataaatacaatatcttatacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcattaaaacattac |
36813149 |
T |
 |
| Q |
681 |
aaag--------------tgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaac |
766 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
36813150 |
aaagtttccataattaattgtccataattaaacaactcattacacatcatt------aaattatatccctacttacattcaacgcaattgcatatggaac |
36813243 |
T |
 |
| Q |
767 |
gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt |
866 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
36813244 |
gaacatacatatataatatattatattccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgtttt |
36813343 |
T |
 |
| Q |
867 |
ccatgcgtattcatctc |
883 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
36813344 |
ccacacgtattcatctc |
36813360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 448 - 883
Target Start/End: Complemental strand, 2857975 - 2857546
Alignment:
| Q |
448 |
ctgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaagg |
546 |
Q |
| |
|
|||||||||||||||||| || |||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
2857975 |
ctgattatgcagacagtgagt-ctgcataattgtaaagcatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaagg |
2857877 |
T |
 |
| Q |
547 |
caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa |
646 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
2857876 |
caaaataattcatacaagattgaaacttggacataatgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaa |
2857777 |
T |
 |
| Q |
647 |
ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc |
746 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
2857776 |
ttaaacaaacgtttgaaattcatcttaacattacaaagtgtccataattaaactactcattacacatcattaaat------taaatccctacttacattc |
2857683 |
T |
 |
| Q |
747 |
aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa |
846 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
2857682 |
aacgcaattacatatggaatgaacatacatatataatatattattttccaccattttccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa |
2857583 |
T |
 |
| Q |
847 |
ggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2857582 |
ggcatatagcttgccgttttccatgcgtattcatctc |
2857546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 470 - 883
Target Start/End: Original strand, 46989614 - 46990035
Alignment:
| Q |
470 |
ctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttga |
569 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| |
|
|
| T |
46989614 |
ctgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaaccaaagtattttcaaaggcaaaataattcatacaaatgtga |
46989713 |
T |
 |
| Q |
570 |
aactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat |
669 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
46989714 |
aactcggacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacatttgaaattcat |
46989813 |
T |
 |
| Q |
670 |
caaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaatt |
755 |
Q |
| |
|
|||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| |
|
|
| T |
46989814 |
caaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacacaatt |
46989907 |
T |
 |
| Q |
756 |
gcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatag |
855 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
46989908 |
gcatgtggaacgaacatacatatataatatattatcttccaccatattccaaaacataaatccgacgtcgtcatcgtcgcgaataagccaaggcatatag |
46990007 |
T |
 |
| Q |
856 |
cttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
46990008 |
cttgccgttttccatgcgtattcatctc |
46990035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 3953255 - 3952778
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
3953255 |
gcagttaactgccgaggaaaacctcgggagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
3953156 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||| ||||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
3953155 |
tt-cggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
3953057 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
3953056 |
atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
3952957 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3952956 |
ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
3952863 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3952862 |
atattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
3952778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 429 - 883
Target Start/End: Complemental strand, 50957704 - 50957243
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
50957704 |
agttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattttaaacatttccaagccattttttcggccagtttttacctgtaattaaa |
50957606 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
50957605 |
tcagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaa |
50957506 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcat--------------caaaacattacaaagtgtccatgattaaacaactcattacacatc |
714 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||| |
|
|
| T |
50957505 |
acagacatttggttaaaattaaacaaacgtttgaaattcatcaaattaaactactcaaaacattccaaagtgtccataattaaactactcattacacatc |
50957406 |
T |
 |
| Q |
715 |
attaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataa |
814 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
50957405 |
att------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacaaaa |
50957312 |
T |
 |
| Q |
815 |
atccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
50957311 |
atccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctc |
50957243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 6489360 - 6489852
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
6489360 |
ctgcagttaactgccgaggaaatcctcggtagttaactgccgaggaaaaca-attatgcagacagtgggttctgcataattctaaagcatttccaagcca |
6489458 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
|||| ||||||| |||||||| ||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||| |
|
|
| T |
6489459 |
tttt-tcggccagtttttaccgctaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacat |
6489557 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca---------------a |
682 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| ||||| | |
|
|
| T |
6489558 |
tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcattgaaacgttacaaaagtgtccatactta |
6489657 |
T |
 |
| Q |
683 |
agtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataa |
782 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6489658 |
agtgtccataattaaacaactcattacacatcatt------aaattaaattcctacttacattcaacacaattgcatatggaacgaacatacatatataa |
6489751 |
T |
 |
| Q |
783 |
tatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct |
882 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
6489752 |
tatattatcttccaccatattccgaaatataaatccgacgacgctatcgtcacgaataagccaaggcatatagcttgccgttttccatgcgtattcgtct |
6489851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 451 - 880
Target Start/End: Original strand, 21951882 - 21952305
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||| || ||||||| |||||| ||||||| |||| || ||||||||||||||| ||||| |||| |||| |
|
|
| T |
21951882 |
attatgcagacagcaggttctgcagaattctaaaacaattccaagccatttt-tcggccagttttgacttgtaattaaaccagagcatttccaaatgcaa |
21951980 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
21951981 |
tataaatcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttgattaaaatta |
21952080 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac |
749 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||| |||||||||| |
|
|
| T |
21952081 |
cacaaacgtttgaaattcatcaaaacgttacaatgtgtccatgattaaacaactcattacacgtcatt------aaattaaatccctagttacattcaat |
21952174 |
T |
 |
| Q |
750 |
gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc |
849 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21952175 |
gcaattgcatatggaacgaacatacaaatataatatatcatcttccaccatattccgaaacctaaatccgacgtcgctatcatcgcgaataagccaaggc |
21952274 |
T |
 |
| Q |
850 |
atatagcttgccgttttccatgcgtattcat |
880 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |
|
|
| T |
21952275 |
acatagcttgccgttttccatgcgtattcat |
21952305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 425 - 883
Target Start/End: Complemental strand, 14403012 - 14402569
Alignment:
| Q |
425 |
cggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaat |
524 |
Q |
| |
|
||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
14403012 |
cggtagttaactgccgaggaaaactgattatgca-acagtgagttctgcataattctaaacatttccaaaccattttttcggccagtttttacctgtaat |
14402914 |
T |
 |
| Q |
525 |
taaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaa |
624 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14402913 |
taaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaa |
14402814 |
T |
 |
| Q |
625 |
ttaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtc--------------catgattaaacaactcattaca |
710 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
14402813 |
ttaaa----------------------caaacgtttgaaattcatgaaaacattacaaagtgtctataattaagtgtccataattaaacaactcattaca |
14402736 |
T |
 |
| Q |
711 |
catcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaac |
810 |
Q |
| |
|
| ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
14402735 |
cgtcatt------aaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattattttccaccatattccgaaac |
14402642 |
T |
 |
| Q |
811 |
ataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14402641 |
ataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
14402569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 431 - 753
Target Start/End: Original strand, 7841158 - 7841474
Alignment:
| Q |
431 |
ttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaacc |
530 |
Q |
| |
|
||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| |
|
|
| T |
7841158 |
ttaactgccgaggaaaactgattatgcaaacagtgggttatgcataattctaaacatttccaagccattttttcgaccagtttttacctgtaattaaacc |
7841257 |
T |
 |
| Q |
531 |
agaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaac |
630 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
7841258 |
agagcatttccaaaggcaaaataattcatacaacattgaaactcagacataaacaagataaatacagtatcttttacaattgtccataagtaaattaaac |
7841357 |
T |
 |
| Q |
631 |
cgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaa |
730 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| ||||||| |
|
|
| T |
7841358 |
cgacatttggttaaaattacacaaacgtttaaaattcatcaaaacgttacaaagtgtccataattaaacaactcattgcacatcatt------aaattaa |
7841451 |
T |
 |
| Q |
731 |
atctctacttacattcaacgcaa |
753 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
7841452 |
atccctacttacattcaacgcaa |
7841474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 447 - 883
Target Start/End: Original strand, 66952 - 67392
Alignment:
| Q |
447 |
actgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaag |
545 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | || |||||||||| ||||||| ||| || ||||||||||||||||||||||| || | |||| |
|
|
| T |
66952 |
actgattatgcagacagtgggttctgcataattgttaagcatttccaagccattttt-cggtcagtttttacctgtaattaaaccagagcaatcccaaat |
67050 |
T |
 |
| Q |
546 |
gcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaa |
645 |
Q |
| |
|
|||| |||||||||||||| || ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
67051 |
gcaatataattcatacaacatttaaactcacttataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaa |
67150 |
T |
 |
| Q |
646 |
attacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctactta |
741 |
Q |
| |
|
| |||||||| ||||||||||||||||||| |||| ||||||||| |||||||||| ||||||| |||||| | | |||| ||||| ||||||| |
|
|
| T |
67151 |
actacacaaaagtttgaaattcatcaaaacggtacatagtgtccataattaaacaacacattacaactcattacacatcattaaatgaaatccctactta |
67250 |
T |
 |
| Q |
742 |
cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataa |
841 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||| |
|
|
| T |
67251 |
cattcaacgcaatcacatatggaacgaacatacatatataatgtattattttccaccatattccgaaacataaatccgacgtcgctattgtctttaataa |
67350 |
T |
 |
| Q |
842 |
gccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
67351 |
gccaagacatatagcttgccgtttttcatgcgtattcatctc |
67392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 605 - 883
Target Start/End: Original strand, 2743678 - 2743964
Alignment:
| Q |
605 |
tacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaa--------------acattacaaagtgtcca |
690 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
2743678 |
tacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaattaaactactcaaaacattacaaagtgttca |
2743777 |
T |
 |
| Q |
691 |
tgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattat |
790 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2743778 |
taattaaactactcattacacatcattaaattaaa------tccctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatattat |
2743871 |
T |
 |
| Q |
791 |
cttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2743872 |
cttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
2743964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 401 - 671
Target Start/End: Complemental strand, 600584 - 600314
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatt |
499 |
Q |
| |
|
||||||||||| ||| ||||| ||||||||||||||| |||||| ||||| |||||| ||||| | ||||||| |||||||| |||||||||| |||| |
|
|
| T |
600584 |
gcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaatctgatcatgcaggcagtgagctctgcatgattctaaaacatttccaagccatt |
600485 |
T |
 |
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| |
|
|
| T |
600484 |
ttt-cggccaatttttacctgtaattaaaccagagcatttttaaaggcaaaataattcatacaacattgaaactcggacataaacaagaaaaatacaata |
600386 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
600385 |
tcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca |
600314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 401 - 671
Target Start/End: Complemental strand, 42166450 - 42166182
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatt |
499 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||||| |||||| ||||| |||| ||||| | ||||||| |||||||| |||||||||| | || |
|
|
| T |
42166450 |
gcagtaaactgccgaggaaaacttcggtagttaactgccgaggaaatttgatt--gcaggcagtgagctctgcatcattctaaaacatttccaagcc-tt |
42166354 |
T |
 |
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
42166353 |
ttttcggccagtttttacctgtaattaaaccagagcattttgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaata |
42166254 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||| |||| |
|
|
| T |
42166253 |
tcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacactaatgtttgaaatttatca |
42166182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 469 - 671
Target Start/End: Complemental strand, 36134255 - 36134053
Alignment:
| Q |
469 |
tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt |
567 |
Q |
| |
|
||||||| |||||||| |||||||||| | |||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||||||| || |
|
|
| T |
36134255 |
tctgcatcattctaaaacatttccaag-ctttttttcggccagtttttacctgtaattaaatcagagcatttcgaaaggcaaaataattcatacaacatt |
36134157 |
T |
 |
| Q |
568 |
gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc |
667 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
36134156 |
gaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattc |
36134057 |
T |
 |
| Q |
668 |
atca |
671 |
Q |
| |
|
|||| |
|
|
| T |
36134056 |
atca |
36134053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 382 - 671
Target Start/End: Original strand, 50213471 - 50213760
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||| ||| || ||||||| ||||||||||| |||| ||| ||||| | || |||||| || |||||| |||||||| | ||||||| ||||| |
|
|
| T |
50213471 |
aggaattagaaatctgactgcacttaactgccgagaaaaacttcgatagttcattgccgaggaaaacaaattatggagacagtgagctctgcatgattct |
50213570 |
T |
 |
| Q |
482 |
aaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat |
580 |
Q |
| |
|
||| |||||| ||| ||||| ||||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
50213571 |
aaaacatttctaagctatttt-tcggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcggacat |
50213669 |
T |
 |
| Q |
581 |
aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
50213670 |
aaacaagaaaaatgcaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca |
50213760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 403 - 671
Target Start/End: Original strand, 47070503 - 47070771
Alignment:
| Q |
403 |
agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatttt |
501 |
Q |
| |
|
|||||||| |||| ||||| || ||||||||||| ||| || |||||||||||| ||||| | ||| ||| |||||||| |||||||||| |||||| |
|
|
| T |
47070503 |
agttaacttccgaggaaaacatccgtagttaactgccgagaaaatctgattatgcagtcagtgagctctacatgattctaaaacatttccaagccatttt |
47070602 |
T |
 |
| Q |
502 |
ttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatc |
601 |
Q |
| |
|
| |||| | ||||||||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
47070603 |
t-cggctagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcgaacataaacaagataaatacaatatc |
47070701 |
T |
 |
| Q |
602 |
ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
47070702 |
ttttccaattgtccataattaaatcaaaccgacgtttggttcaaattacacaaacgtttgaaattcatca |
47070771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 429 - 671
Target Start/End: Complemental strand, 16647185 - 16646944
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa |
527 |
Q |
| |
|
||||||||| |||||| || ||||||||| ||||| | ||||||| |||||||| |||||||||| |||||| |||||| |||||| |||||||||| |
|
|
| T |
16647185 |
agttaactgccgaggaaatctaattatgcaggcagtgagctctgcatgattctaaaacatttccaagccattttc-cggccaatttttatctgtaattaa |
16647087 |
T |
 |
| Q |
528 |
accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta |
627 |
Q |
| |
|
|||||| ||||| |||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||| | |
|
|
| T |
16647086 |
accagagcatttcgaaaggcaaaacaattcatacaacattgaaactcagacataaa-aagataaatataatatcttttacgattgtccataattaaatca |
16646988 |
T |
 |
| Q |
628 |
aaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
16646987 |
aaccgacatttggtttaaattacacaaacgtttgaaattcatca |
16646944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 403 - 666
Target Start/End: Original strand, 52387833 - 52388097
Alignment:
| Q |
403 |
agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgatt--atgcagacagtgggttctgcataattctaaa-catttccaagtcatt |
499 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||| |||||| |||||| | |||| |||| | ||||||| |||||||| |||||||||| | || |
|
|
| T |
52387833 |
agttaactgccgacgaaaacttcggtagttaactgccgaggaaatctgattgcaggcagt-agtgagctctgcatcattctaaaacatttccaagcc-tt |
52387930 |
T |
 |
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||| |
|
|
| T |
52387931 |
ttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaccaattcatacaacattgaaactcggacataaacaatataaatacaata |
52388030 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaatt |
666 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
52388031 |
tcttttacaattgaccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaatt |
52388097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 469 - 669
Target Start/End: Complemental strand, 9473921 - 9473721
Alignment:
| Q |
469 |
tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt |
567 |
Q |
| |
|
||||||| |||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||||| || |
|
|
| T |
9473921 |
tctgcatcattctaaaacatttccaagcc-ttttttcggccagtttttacctgtaattaaaccagatcatttcgaaaggcaaaacaattcatacaacatt |
9473823 |
T |
 |
| Q |
568 |
gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc |
667 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
9473822 |
gaaactcggacataaacaatataaatacaatatctattacaattatccataattaaatcaaaccgacatttggttcaagttacacaaacgtttgaaattc |
9473723 |
T |
 |
| Q |
668 |
at |
669 |
Q |
| |
|
|| |
|
|
| T |
9473722 |
at |
9473721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 407 - 671
Target Start/End: Original strand, 2271395 - 2271658
Alignment:
| Q |
407 |
aactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcg |
505 |
Q |
| |
|
||||||||| ||||| ||||| ||||||||| |||||| |||||| |||| ||||| | ||| || |||||||| ||||| |||| | |||||||| |
|
|
| T |
2271395 |
aactgccgaggaaaacctcgggagttaactgccgaggaaatctgatt--gcaggcagtgagctcttgatcattctaaaacattttcaagcc-ttttttcg |
2271491 |
T |
 |
| Q |
506 |
gccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaa-tacaatatcttt |
604 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
2271492 |
gccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaacttggacataaacaagataaaatacaatatcttt |
2271591 |
T |
 |
| Q |
605 |
tacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||||| |||||||||| |||||||||| |
|
|
| T |
2271592 |
tacaattgtccataattaaatcaaaccgacatttggttcaaattagacaaacgtttaaaattcatca |
2271658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 382 - 582
Target Start/End: Original strand, 2743412 - 2743611
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||| ||||| ||||||||| |||||| |||||||||||||||||||||| |||||||| | | |
|
|
| T |
2743412 |
aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataaatgt |
2743510 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||| ||| |||||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
2743511 |
aaacatttcgaagccattttttcggccagtttttacttgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata |
2743610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 407 - 582
Target Start/End: Original strand, 4004885 - 4005058
Alignment:
| Q |
407 |
aactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcg |
505 |
Q |
| |
|
||||| ||| ||||| ||||||||||||||| |||||| |||||| |||| ||||| | ||||||| |||||||| |||||||||| |||||||||| |
|
|
| T |
4004885 |
aactgtcgaggaaaacctcggtagttaactgccgaggaaatctgatt--gcaggcagtgagctctgcatcattctaaaacatttccaag-cattttttcg |
4004981 |
T |
 |
| Q |
506 |
gccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataa |
582 |
Q |
| |
|
|||| ||||||| ||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||| ||||||| |
|
|
| T |
4004982 |
gccagtttttacatgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataa |
4005058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 48251001 - 48250873
Alignment:
| Q |
310 |
gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa |
408 |
Q |
| |
|
||||||||||||||||||||| | | |||||| | |||||||| ||||||||| || | ||||||| | |||||||||||||||| |||||||||| |
|
|
| T |
48251001 |
gttgttcccacattacataaggttgtgccacataaataaatgacgtttttgccccctcggcagttaactgctgaggaatttgaattccggctgcagttaa |
48250902 |
T |
 |
| Q |
409 |
ctgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||| ||||| ||||| ||||||||| |
|
|
| T |
48250901 |
ctgccgaggaaaacctcgggagttaactg |
48250873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 46989522 - 46989616
Alignment:
| Q |
343 |
agtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||||| |||||||||||| | ||||||| | || ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
46989522 |
agtaaatgacgtttttgccctctcggcagttaactaccgagaaatttgaattccggctgcagttaactgccgaggaaaacctcggtagttaactg |
46989616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 578 - 677
Target Start/End: Original strand, 7314586 - 7314685
Alignment:
| Q |
578 |
cataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacat |
677 |
Q |
| |
|
|||||| |||| |||||| |||||| ||||||| ||| |||||||| || |||||||| |||||||||| || || |||||||||||| |||||||| |
|
|
| T |
7314586 |
cataaataagaacaatacataatctttcacaattgaccaaaattaaatcaattcgacattttgttaaaattatacgaatgtttgaaattcaacaaaacat |
7314685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 14398549 - 14398612
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaa |
445 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| | || ||||| |||||||||| |||||| |
|
|
| T |
14398549 |
aggaatttgaattccggctgcagttaactgccgagggaatcctcggaagttaactgtcgaggaa |
14398612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 48888766 - 48888809
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
48888766 |
tccggctgcagttaactgccgaggaaaatctcggtagttaactg |
48888809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 310 - 444
Target Start/End: Original strand, 55385078 - 55385213
Alignment:
| Q |
310 |
gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa |
408 |
Q |
| |
|
|||||||||||||| |||||| | | | ||||| ||||| |||| ||||||||| || | ||||||| | | | | || ||| |||| |||||||||| |
|
|
| T |
55385078 |
gttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctgcagttaa |
55385177 |
T |
 |
| Q |
409 |
ctgccgaagaaaatctcggtagttaactgttgagga |
444 |
Q |
| |
|
||||||| ||||| |||||||||||||||| ||||| |
|
|
| T |
55385178 |
ctgccgaggaaaacctcggtagttaactgtcgagga |
55385213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 1388236 - 1388183
Alignment:
| Q |
310 |
gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccc |
362 |
Q |
| |
|
||||||||||||||||||||| || ||||||| |||||||||||||||||||| |
|
|
| T |
1388236 |
gttgttcccacattacataaggctgtgccacacaagtaaatgacatttttgccc |
1388183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 43476132 - 43476261
Alignment:
| Q |
310 |
gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaat-tccgactgcagtta |
407 |
Q |
| |
|
||||||| ||||||||||||| | | ||||||| |||||||||| ||||||||| || | ||||||| | | | | || ||| |||| ||||||||| |
|
|
| T |
43476132 |
gttgttctcacattacataaggttgtgccacacgagtaaatgacgtttttgccccctcggaagttaactgccgaagttttagaaaatccggctgcagtta |
43476231 |
T |
 |
| Q |
408 |
actgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||||||| ||||| ||||||||||||||| |
|
|
| T |
43476232 |
actgccgaggaaaacctcggtagttaactg |
43476261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 49219897 - 49219796
Alignment:
| Q |
335 |
gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaa |
434 |
Q |
| |
|
||||||| |||||| ||| ||||||| || | |||||||| | | ||||||| ||| |||| ||||||||||||||||| ||||| || ||||||||| |
|
|
| T |
49219897 |
gccacactagtaaaatacaattttgcctcctcggtagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaaaccttggtagttaa |
49219798 |
T |
 |
| Q |
435 |
ct |
436 |
Q |
| |
|
|| |
|
|
| T |
49219797 |
ct |
49219796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 445
Target Start/End: Original strand, 8475859 - 8475903
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaa |
445 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
8475859 |
gcagttaactgccgaggaaaacctcggtagttaactgctgaggaa |
8475903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 49144496 - 49144460
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
49144496 |
gcagttaactgccgaagaaaacctcggtagttaactg |
49144460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 2647746 - 2647703
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
2647746 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
2647703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 7839519 - 7839472
Alignment:
| Q |
423 |
ctcggtagttaactgttgaggaagactgattatgcagacagtgggttc |
470 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||||||||||| |
|
|
| T |
7839519 |
ctcggtagttaactgccgaggaaaactaattatgcagacagtgggttc |
7839472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 34049106 - 34049149
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
34049106 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
34049149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 50998727 - 50998676
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaa |
445 |
Q |
| |
|
|||| ||||||||||||||||||||||| | |||||| ||||||| |||||| |
|
|
| T |
50998727 |
tccggctgcagttaactgccgaagaaaaccgcggtagctaactgtcgaggaa |
50998676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 54389821 - 54389864
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
54389821 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
54389864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 2647762 - 2647812
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactga |
451 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||| |||||| ||||| |
|
|
| T |
2647762 |
gcagttaactgccgaagaaaacctcggtggttaactgccgaggaaaactga |
2647812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 19440287 - 19440325
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
19440287 |
ctgcagttaactgccgaggaaaacctcggtagttaactg |
19440325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 41579766 - 41579728
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
41579766 |
ctgcagttaactgccgaggaaaacctcggtagttaactg |
41579728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 41803029 - 41803067
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
41803029 |
ctgcagttaactgccgaggaaaacctcggtagttaactg |
41803067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 5136527 - 5136580
Alignment:
| Q |
310 |
gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccc |
362 |
Q |
| |
|
||||||||||||||||||||| || ||||||| |||||||||| ||||||||| |
|
|
| T |
5136527 |
gttgttcccacattacataagactgtgccacacaagtaaatgacgtttttgccc |
5136580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 23443165 - 23443132
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccga |
415 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |
|
|
| T |
23443165 |
aggaatttgaattccggctgcagttaactgccga |
23443132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 434
Target Start/End: Original strand, 49217112 - 49217161
Alignment:
| Q |
385 |
aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaa |
434 |
Q |
| |
|
|||| ||| |||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
49217112 |
aattagaaatccgactgcagttaactgccaagaaaaatctcggtagttaa |
49217161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 327; Significance: 0; HSPs: 42)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 24754083 - 24753588
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| | || |||||||||||| |||| ||||| ||||||| | ||||| |||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
24754083 |
aggaatttgaaattcggctgcagttaactaccgaggaaaacctcggtaataaactgccgaggaaaactgattatgcagacagcaagttctgcataattct |
24753984 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
24753983 |
aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactgggacata |
24753884 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca |
681 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
24753883 |
aacaagataaatacaatatcttttacaatttttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca |
24753784 |
T |
 |
| Q |
682 |
aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata |
781 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
24753783 |
aagtgtccataattaaacaactcattacacatcattaaat------taaatccctacttacattcaacgcaattgcatatggaacaaacatacatatata |
24753690 |
T |
 |
| Q |
782 |
atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc |
881 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||| |||||||||| |
|
|
| T |
24753689 |
atatattattttccaccatattccgaaacataaatacgatgtcgccgtcgtcgcgaataagcaaaagcatatagcttgccgttttccatacgtattcatc |
24753590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 370 - 883
Target Start/End: Original strand, 3795339 - 3795859
Alignment:
| Q |
370 |
agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggtt |
469 |
Q |
| |
|
||||||| ||| ||||||||||| |||| ||||||||||||||||| ||||| || || ||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
3795339 |
agttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaaccttggaagttaactgccgaggaaaactgattatgcagacagtgggt- |
3795437 |
T |
 |
| Q |
470 |
ctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttga |
569 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| |
|
|
| T |
3795438 |
ctgcataattctaaacatttccaagccatttttttggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattga |
3795537 |
T |
 |
| Q |
570 |
aactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca- |
668 |
Q |
| |
|
||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3795538 |
aactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcat |
3795637 |
T |
 |
| Q |
669 |
-------------tcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaatt |
755 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
3795638 |
caaattaaactactcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattcaacgcaatt |
3795731 |
T |
 |
| Q |
756 |
gcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatag |
855 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
3795732 |
gcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgtcgccgtcgtcacgaataagcaaaggcatatag |
3795831 |
T |
 |
| Q |
856 |
cttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
3795832 |
cttgccgttttccatgcgtattcatctc |
3795859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 7267484 - 7267008
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatt |
499 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||| |||| |||||||||| |||| |
|
|
| T |
7267484 |
gcagttaactgccaaggaaaatctcggtagttaactgccgaggaaatctgattatgcagacagtgggt-ctgcataattgtaaagcatttccaagccatt |
7267386 |
T |
 |
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||| ||||||||| ||||||| ||||||| ||||||| |
|
|
| T |
7267385 |
ttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataatttatacaagattgaaactcggacataatgaagataagtacaata |
7267286 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac |
699 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
7267285 |
tcttttacaattgttcataattaaattaaacctacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaac |
7267186 |
T |
 |
| Q |
700 |
aactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacca |
799 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7267185 |
tactcattacacatcattaaat------taaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccacca |
7267092 |
T |
 |
| Q |
800 |
tattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
7267091 |
tattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggtatatagcttgtcgttttccatgcgtattcatctc |
7267008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 424 - 883
Target Start/End: Complemental strand, 39798456 - 39798004
Alignment:
| Q |
424 |
tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa |
523 |
Q |
| |
|
|||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
39798456 |
tcggcagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttttcggccagtttttacctgtaa |
39798357 |
T |
 |
| Q |
524 |
ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa |
623 |
Q |
| |
|
||||||||||| |||| |||||| ||||||||||||||| ||||||||| | ||||| |||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
39798356 |
ttaaaccagacaatttccaaaggttaaataattcatacaatattgaaactcggtcataatcaagataaatgcaatatcttttacaattgttcataattaa |
39798257 |
T |
 |
| Q |
624 |
attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt |
722 |
Q |
| |
|
|||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| |
|
|
| T |
39798256 |
attaaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaa--gtccataattaaactactcattacacatcatt----- |
39798164 |
T |
 |
| Q |
723 |
aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg |
822 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39798163 |
-aaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg |
39798065 |
T |
 |
| Q |
823 |
tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39798064 |
tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
39798004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 28342554 - 28343032
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
||||| ||||||||||| |||| ||| |||||||||||| |||||| || |||||||||||||||||||||||||||||||||| |||||||| | |
|
|
| T |
28342554 |
ctgcaattaactgccgaggaaattcttggtagttaactgccgaggaaaaca-attatgcagacagtgggttctgcataattctaaagaatttccaa-act |
28342651 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| |||||||| |
|
|
| T |
28342652 |
atttttcggccagtttttatctgtaattaaaccagaacatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaa |
28342751 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
28342752 |
tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgttcataattaa |
28342851 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac |
797 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28342852 |
acaattcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac |
28342945 |
T |
 |
| Q |
798 |
catatt-ctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |
|
|
| T |
28342946 |
catattccgaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttacatgtgtattcgtctc |
28343032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 1096630 - 1097092
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| |||||| |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
1096630 |
agttaactgccgaggaaaactgattatgaagacagtgggttatgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaa |
1096729 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1096730 |
ccagagcatttccaaaggcaaaataattcatacaacattaaaactcggacataaacaagataaatacagtatcttttacaattgtccataattaaattaa |
1096829 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtc--------------catgattaaacaactcattacacatc |
714 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||| |
|
|
| T |
1096830 |
accgacatttggttcaaactacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgttcataattaaacaactcattacatatc |
1096929 |
T |
 |
| Q |
715 |
attaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataa |
814 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1096930 |
att------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataa |
1097023 |
T |
 |
| Q |
815 |
atccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|| |||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
1097024 |
attcgacgtcgctatcgtcgcaaataagcccaagcatataacttgccgttttccatgcgtattcgtctc |
1097092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 41564532 - 41564054
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| | ||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
41564532 |
gcagttaactgccgaggaaaacctcggtagttaacggccaaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
41564433 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
41564432 |
tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
41564333 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
41564332 |
atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
41564233 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
| ||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
41564232 |
ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc |
41564139 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41564138 |
atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
41564054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 41181493 - 41181919
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||||||| |||||||| ||| | ||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
41181493 |
attatgcagacagtgggttatgcataattctaatgcatttccaagccattttttgggc-agtttttacctgtaattaaaccagagcatttccaaaggcaa |
41181591 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| ||||||||| ||||||||| | ||||| |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
41181592 |
tataaatcatacaacattgaaactcggtcataactaagaaaaatacaatatcttttacagttgtccataattaaatcaaaccgacatttggttcaaatta |
41181691 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac |
749 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
41181692 |
cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaac |
41181785 |
T |
 |
| Q |
750 |
gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc |
849 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || |
|
|
| T |
41181786 |
gcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgtataagccaatgc |
41181885 |
T |
 |
| Q |
850 |
atatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
41181886 |
atatagcttgccgttttccatgcgtattcgtctc |
41181919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 403 - 883
Target Start/End: Complemental strand, 5351770 - 5351295
Alignment:
| Q |
403 |
agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttt |
502 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
5351770 |
agttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattttt |
5351671 |
T |
 |
| Q |
503 |
tcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||||| |
|
|
| T |
5351670 |
tcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatat |
5351572 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca |
700 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5351571 |
cttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaact |
5351472 |
T |
 |
| Q |
701 |
actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat |
800 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5351471 |
actcattacacatcattaaattaaa------tccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat |
5351378 |
T |
 |
| Q |
801 |
attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5351377 |
attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
5351295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 43943720 - 43944210
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||||||||||| |||||| | |||||||||| | |||||| |||||||||||||| |||||||||| || |
|
|
| T |
43943720 |
ctgcagttaactgtcgaggaaaaactcggtagttaactgccgaggaaaaacaattatgcagagaatgggttatgcataattctaaagcatttccaagcca |
43943819 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaata--attcatacaacgttgaaactcagacataaacaagataaatac |
595 |
Q |
| |
|
||||| ||| || ||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||| || |||||| | ||||||||||| |||||| |
|
|
| T |
43943820 |
ttttt-cggtcagtttttacctgtaattaaaccagagcatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaacaagaaaaatac |
43943918 |
T |
 |
| Q |
596 |
aatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgatt |
695 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||| | |
|
|
| T |
43943919 |
aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacaaaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcat |
43944018 |
T |
 |
| Q |
696 |
aaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatc |
791 |
Q |
| |
|
||||||| ||||||| |||||| | | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
43944019 |
aaacaacacattacaattcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatatattatattatc |
43944118 |
T |
 |
| Q |
792 |
ttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
43944119 |
ttccaccatattccgaaacataaatctgacgtcgctatcatcgcgaataagccaatgcatatagcttgccgttttccatgcgtattcatctc |
43944210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 449 - 883
Target Start/End: Complemental strand, 45479813 - 45479385
Alignment:
| Q |
449 |
tgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggc |
547 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||| ||||||| ||||||| ||||||| ||||| ||||||| |
|
|
| T |
45479813 |
tgattatgcagacagtgggttctgcataattctaaagcattttcaagctattttt-cggccagtttttacttgtaatttaaccagagcatttccaaaggc |
45479715 |
T |
 |
| Q |
548 |
aaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaat |
647 |
Q |
| |
|
|| |||| | ||||||| || |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| |
|
|
| T |
45479714 |
aatataactaatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgttcataattaaatcaaaccgacatttggttcaaaa |
45479615 |
T |
 |
| Q |
648 |
tacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattca |
747 |
Q |
| |
|
|||| ||| ||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
45479614 |
tacaaaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattacacatcattaaat------taaatccctacttacattca |
45479521 |
T |
 |
| Q |
748 |
acgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaag |
847 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
45479520 |
acgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgccgatatcgtcgcgaataagccaag |
45479421 |
T |
 |
| Q |
848 |
gcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |
|
|
| T |
45479420 |
gcatatagcttgccgttttccatgtgtattcatctc |
45479385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 425 - 883
Target Start/End: Original strand, 209041 - 209494
Alignment:
| Q |
425 |
cggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaat |
524 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
209041 |
cggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaat |
209140 |
T |
 |
| Q |
525 |
taaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataatta |
622 |
Q |
| |
|
||||||||| |||| |||||| || |||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
209141 |
taaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataatta |
209239 |
T |
 |
| Q |
623 |
aattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt |
722 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
209240 |
aattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt----- |
209334 |
T |
 |
| Q |
723 |
aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg |
822 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
209335 |
-aaattaaatccatacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacg |
209433 |
T |
 |
| Q |
823 |
tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
209434 |
tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
209494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 449 - 883
Target Start/End: Original strand, 10620054 - 10620483
Alignment:
| Q |
449 |
tgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggca |
548 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||| | |
|
|
| T |
10620054 |
tgattatgcagacagcaggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcattc-caaaggta |
10620152 |
T |
 |
| Q |
549 |
aaataattcatac--aacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa |
646 |
Q |
| |
|
| |||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10620153 |
atataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaa |
10620252 |
T |
 |
| Q |
647 |
ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc |
746 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
10620253 |
ttaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattc |
10620346 |
T |
 |
| Q |
747 |
aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa |
846 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
10620347 |
aatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa |
10620446 |
T |
 |
| Q |
847 |
ggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10620447 |
ggcatatagcttgccgttttccatgcgtattcatctc |
10620483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 369 - 883
Target Start/End: Original strand, 24601640 - 24602160
Alignment:
| Q |
369 |
tagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggt |
468 |
Q |
| |
|
|||||||| ||| |||||||| || | | |||||||||||| |||| |||| |||||||||||||| |||||| |||||||||||||||||||| | |
|
|
| T |
24601640 |
tagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccgaggaaaactgattatgcagacagtggat |
24601739 |
T |
 |
| Q |
469 |
tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt |
567 |
Q |
| |
|
||| |||||||| ||| |||||||||| ||||||| ||| || ||||||| ||||||||||||||| ||||| ||||||||| |||| ||||||||| || |
|
|
| T |
24601740 |
tctacataattcaaaagcatttccaagccattttt-cggtcagtttttacttgtaattaaaccagagcatttccaaaggcaatataaatcatacaacatt |
24601838 |
T |
 |
| Q |
568 |
gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc |
667 |
Q |
| |
|
||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
24601839 |
gaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacagacgtttgaaattc |
24601938 |
T |
 |
| Q |
668 |
atcaaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaa |
753 |
Q |
| |
|
|||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
24601939 |
atcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaa |
24602032 |
T |
 |
| Q |
754 |
ttgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatat |
853 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
24602033 |
ttgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatccgacgttgctatcgtcgcgaataagccaaggcatat |
24602130 |
T |
 |
| Q |
854 |
agcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||| ||||||| |||| |
|
|
| T |
24602131 |
agcttgccgttttccatccgtattcgtctc |
24602160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 369 - 883
Target Start/End: Complemental strand, 24612474 - 24611954
Alignment:
| Q |
369 |
tagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggt |
468 |
Q |
| |
|
|||||||| ||| |||||||| || | | |||||||||||| |||| |||| |||||||||||||| |||||| |||||||||||||||||||| | |
|
|
| T |
24612474 |
tagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccgaggaaaactgattatgcagacagtggat |
24612375 |
T |
 |
| Q |
469 |
tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt |
567 |
Q |
| |
|
||| |||||||| ||| |||||||||| ||||||| ||| || ||||||| ||||||||||||||| ||||| ||||||||| |||| ||||||||| || |
|
|
| T |
24612374 |
tctacataattcaaaagcatttccaagccattttt-cggtcagtttttacttgtaattaaaccagagcatttccaaaggcaatataaatcatacaacatt |
24612276 |
T |
 |
| Q |
568 |
gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc |
667 |
Q |
| |
|
||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
24612275 |
gaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacagacgtttgaaattc |
24612176 |
T |
 |
| Q |
668 |
atcaaaacattacaaagtgt--------------ccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaa |
753 |
Q |
| |
|
|||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
24612175 |
atcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaa |
24612082 |
T |
 |
| Q |
754 |
ttgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatat |
853 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
24612081 |
ttgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatccgacgttgctatcgtcgcgaataagccaaggcatat |
24611984 |
T |
 |
| Q |
854 |
agcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||| ||||||| |||| |
|
|
| T |
24611983 |
agcttgccgttttccatccgtattcgtctc |
24611954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 399 - 883
Target Start/End: Complemental strand, 9660097 - 9659604
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
|||||||| |||||||| ||||| || ||||||||| || |||||| || ||||||||||||||||||| |||||||||||||| |||||||||| || |
|
|
| T |
9660097 |
ctgcagttgactgccgaggaaaaccttggtagttaattgccgaggaaaaca-attatgcagacagtgggttatgcataattctaaaacatttccaagcca |
9659999 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| |||||||| |
|
|
| T |
9659998 |
ttttt-cggccagtttttacctttaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaa |
9659900 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca--------------aa |
683 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |
|
|
| T |
9659899 |
tatcttttacaattgtccataattaaatcaaaacgacatttggttaaaattacacaaacgcttgaaattcatcaaaacgttacacagtgtccataattaa |
9659800 |
T |
 |
| Q |
684 |
gtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatac--atatata |
781 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||| | |
|
|
| T |
9659799 |
gtgtccataattaaacaactcattacacatcatt------aaattaaatacctacttacattcaacgcaattgcatattgaacgaacatacaaatataaa |
9659706 |
T |
 |
| Q |
782 |
atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc |
881 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
9659705 |
atatattatcttccaccatattccgaaacataaactcgacgtcgctatcgtcacgaataagccaaggcatatagcttgccgttttccatgcgtattcgtc |
9659606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 447 - 882
Target Start/End: Original strand, 12905601 - 12906037
Alignment:
| Q |
447 |
actgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaag |
545 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||| || ||| ||||||| ||||| ||||||| ||||| ||||| |
|
|
| T |
12905601 |
actggttatgcagacagtgagttctgcataattctaaagcatttccaagccattttt-cgaccagtttttac---taatttaaccagagcatttccaaag |
12905696 |
T |
 |
| Q |
546 |
gcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaa |
645 |
Q |
| |
|
|||| |||| ||||||||| || |||||||| |||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
12905697 |
gcaatataactcatacaacatttaaactcagtcataaacaagtaaaatacaatatattttacaattgtccataattaaatcaaaccgacatttggttcaa |
12905796 |
T |
 |
| Q |
646 |
attacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctactta |
741 |
Q |
| |
|
| |||||||| ||||||||||||||||||| ||||| |||||| || |||||||||| ||||||| |||||| | | |||||||||| |||||| |
|
|
| T |
12905797 |
aatacacaaaagtttgaaattcatcaaaacgttacatagtgtcaataattaaacaacacattacaactcattacacatcattaaattaaatccgtactta |
12905896 |
T |
 |
| Q |
742 |
cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataa |
841 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
12905897 |
cattcaacgcaattgcatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataa |
12905996 |
T |
 |
| Q |
842 |
gccaaggcatatagcttgccgttttccatgcgtattcatct |
882 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12905997 |
gccaaggcatatagcttgttgttttccatgcgtattcatct |
12906037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 41052704 - 41053142
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
41052704 |
attatgcagacagtgggttctgcataattctaaagcatttccaagccatttt-tcggccagtttttacctgtaattaaaccagagtatttccaaaggcaa |
41052802 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
41052803 |
tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatta |
41052902 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaac--tcattacaca--tcattaaattaaaattaaatctctacttacatt |
745 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| ||||| | | |||| ||| |||||| | | ||||||| ||||||||||| |
|
|
| T |
41052903 |
cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaattcattaca-catcattaaattcctacttacatt |
41053001 |
T |
 |
| Q |
746 |
caacgcaattgc--atatggaacgaacatacatatat-aatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataag |
842 |
Q |
| |
|
||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
41053002 |
caatgcaattgcatatatggaacgaacacacatatataaatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataag |
41053101 |
T |
 |
| Q |
843 |
ccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||| |||| |
|
|
| T |
41053102 |
ccaaggcatatagcttggcgttttcaatgcgtattcgtctc |
41053142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 41004559 - 41005045
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||| |||||| | | |||||||||||||||| ||||||||||||||||| |||||| ||| || |
|
|
| T |
41004559 |
ctgcagttaactgccgaaaaaaacttcggtagttaactgccgaggaaaaat-attatgcagacagtggattctgcataattctaaagcatttcaaagcca |
41004657 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
|||| ||| || |||||||||||||||||||| | ||||| ||||| ||| |||| ||||||||| ||||||||| | ||||||||||| ||||| || |
|
|
| T |
41004658 |
tttt--cggtcagtttttacctgtaattaaaccgaagcatttccaaagacaatataaatcatacaacattgaaactcggtcataaacaagaaaaatataa |
41004755 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
41004756 |
tatcttttacaattgtctataattaaatcaaaccaacatttggtttaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaa |
41004855 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaa----ttaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt |
793 |
Q |
| |
|
||||| ||||||| |||||| | | | |||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||| || || |
|
|
| T |
41004856 |
acaacacattacaactcattacacatcattatattaaatcactacttacattcatcacaattgcatatggaatgaacatacatatataatatataatttt |
41004955 |
T |
 |
| Q |
794 |
ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|| |||||||| ||||||||||| |||||| | |||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
41004956 |
tcaacatattctgaaacataaatctgacgtcccaatcgtctttaataagccagggcatgtagcttgtcgttttccatgcgtattcatctc |
41005045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 471 - 883
Target Start/End: Complemental strand, 439792 - 439374
Alignment:
| Q |
471 |
tgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttga |
569 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| ||| || |||||||||||||||||||||| ||||| ||||||||| |||| ||||||||| |||| |
|
|
| T |
439792 |
tgcataattctaaagcatttccaagccattttt-cggtcagtttttacctgtaattaaaccagcgcatttccaaaggcaatataaatcatacaacattga |
439694 |
T |
 |
| Q |
570 |
aactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat |
669 |
Q |
| |
|
||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
439693 |
aactcggtcataaacaaga--aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcat |
439596 |
T |
 |
| Q |
670 |
caaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaatt |
755 |
Q |
| |
|
|||| | ||||| |||||| ||| ||||||||||||||||||||| ||| | |||||||| || |||||||||| | ||||| |
|
|
| T |
439595 |
caaagcgttacaaagtatccataattaagtgttcataattaaacaactcattacacatgatt------atattaaatccctccttacattcatcacaatt |
439502 |
T |
 |
| Q |
756 |
gcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatag |
855 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
439501 |
gcatatggaacgaacatacatatataatatattactttccaccatattccgaaacataaatccgacgtcgctatcgtctttaataagccagggcatatag |
439402 |
T |
 |
| Q |
856 |
cttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
439401 |
cttgccgttttccatgcgtattcatctc |
439374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 369 - 883
Target Start/End: Complemental strand, 82333 - 81814
Alignment:
| Q |
369 |
tagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggt |
468 |
Q |
| |
|
|||||||| ||| || |||||||| ||| ||||||||||||| ||| ||||| ||| ||||||||||| ||||||| || |||||||||||| || || |
|
|
| T |
82333 |
tagttaactgtcgagtaatttgaaa-ccggctgcagttaactgtcgaggaaaacctccgtagttaactgctgaggaaaaca-attatgcagacaatgagt |
82236 |
T |
 |
| Q |
469 |
tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt |
567 |
Q |
| |
|
|||||||||||||||| ||||| ||| ||||||| ||| || ||||||||||||||||||||||| ||||| ||||||| |||| |||| |||| | |
|
|
| T |
82235 |
tctgcataattctaaagcattttcaaaccattttt-cggtcagtttttacctgtaattaaaccagagcatttctaaaggcagtataaatcatccaacatc |
82137 |
T |
 |
| Q |
568 |
gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc |
667 |
Q |
| |
|
||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
82136 |
aaaacttggtcataaacaagaaaaatacaatatcttttacaattgtccata-ttaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattc |
82038 |
T |
 |
| Q |
668 |
atcaaaacattacaaagtgtc--------------catgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaa |
753 |
Q |
| |
|
|||||||| |||||||||||| ||| ||||||||||||||||||||| ||| | ||||||| |||||||||||| | ||| |
|
|
| T |
82037 |
atcaaaacgttacaaagtgtccataattaagtgtgcataattaaacaactcattacacatgatt------atattaaatgcatacttacattcatcacaa |
81944 |
T |
 |
| Q |
754 |
ttgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatat |
853 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||| |||||| ||||| |||| |
|
|
| T |
81943 |
ttgcatatggaacgaacatacatatataatatattattttcaaccatattccgaaacataaatccgacgtcgttatcgtctttaataagtcaagggatat |
81844 |
T |
 |
| Q |
854 |
agcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
81843 |
agcttgccgttttccatgcgtattcatctc |
81814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 429 - 781
Target Start/End: Complemental strand, 38950565 - 38950232
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa |
528 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| || ||||||| ||||||||||||| |
|
|
| T |
38950565 |
agttaactgccgaggaaatctgattatgcagacagtgggttctgcataattctaagtatttccgagccattttt-------------acctgtaattaaa |
38950479 |
T |
 |
| Q |
529 |
ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa |
628 |
Q |
| |
|
||||| ||||| |||||| || ||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38950478 |
ccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaattaa |
38950379 |
T |
 |
| Q |
629 |
accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt |
728 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| | |
|
|
| T |
38950378 |
accgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcattaaat------t |
38950285 |
T |
 |
| Q |
729 |
aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata |
781 |
Q |
| |
|
||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
38950284 |
aaatccctacttacattcaacacaattacatatggaacgaacatacatatata |
38950232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 401 - 725
Target Start/End: Original strand, 18000265 - 18000590
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
18000265 |
gcagttaactgccgaggaaaacctcggtagttaactggcgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt |
18000364 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| |||||| || |||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
18000365 |
tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat |
18000463 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
18000464 |
atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa |
18000563 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaa |
725 |
Q |
| |
|
| ||||||||||||||||||||||||| |
|
|
| T |
18000564 |
ctactcattacacatcattaaattaaa |
18000590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 406 - 671
Target Start/End: Original strand, 10825256 - 10825521
Alignment:
| Q |
406 |
taactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttc |
504 |
Q |
| |
|
|||||| ||| ||||| ||||| ||||||||| ||| || |||||||||||| ||||| | ||||||| |||||||| |||||||||| ||||||||| |
|
|
| T |
10825256 |
taactgtcgaggaaaacctcggcagttaactgccgagaaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaag-cattttttc |
10825354 |
T |
 |
| Q |
505 |
ggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttt |
604 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10825355 |
ggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcagacataaacaagataaatacaatatcttt |
10825454 |
T |
 |
| Q |
605 |
tacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10825455 |
tacaattgtccataattaaatcaaacagacatttggttcaaattacacaaacgtttgaaattcatca |
10825521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 370 - 666
Target Start/End: Complemental strand, 25184900 - 25184606
Alignment:
| Q |
370 |
agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggtt |
469 |
Q |
| |
|
||||||| ||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||| |||||| || |||||| | |||||||||| |
|
|
| T |
25184900 |
agttaactgtcgaggaatttgaaa-ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaaca-attatgtaaacagtgggtt |
25184803 |
T |
 |
| Q |
470 |
ctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttg |
568 |
Q |
| |
|
||| ||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||| |
|
|
| T |
25184802 |
ctgtataattctaaaacatttccaagccattttt-cggccagtttttacctgtaattaaaccagagtattttcaaaggcaatataaatcatacaacattg |
25184704 |
T |
 |
| Q |
569 |
aaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaatt |
666 |
Q |
| |
|
|||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
25184703 |
aaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgatatttggttcaaattacacaaacgtttgaaatt |
25184606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 407 - 671
Target Start/End: Complemental strand, 39951203 - 39950941
Alignment:
| Q |
407 |
aactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcg |
505 |
Q |
| |
|
||||||||| |||| |||||||||||| ||| |||||| |||||| ||| ||||| | ||||||| |||||||| |||||||||| | |||||||| |
|
|
| T |
39951203 |
aactgccgattaaaacctcggtagttaattgtcgaggaaatctgatt--gcaagcagtgagctctgcatcattctaaaacatttccaagcc-ttttttcg |
39951107 |
T |
 |
| Q |
506 |
gccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatctttt |
605 |
Q |
| |
|
||| |||||| |||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
39951106 |
accagtttttatctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatctttt |
39951007 |
T |
 |
| Q |
606 |
acaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
39951006 |
acaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca |
39950941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 32952861 - 32953033
Alignment:
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
|||||||| || |||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| |
|
|
| T |
32952861 |
tttttcggtcagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcagacatcaacaagaaaaatacaat |
32952960 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
32952961 |
attttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatca |
32953033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 693 - 883
Target Start/End: Complemental strand, 1150779 - 1150595
Alignment:
| Q |
693 |
attaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatct |
792 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
1150779 |
attaaacaattcattacacatcattaaattaaa------tcactacttacattcaatgaaattgcatatggaacgaacatacatatataatatagtatct |
1150686 |
T |
 |
| Q |
793 |
tccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||| | ||||| ||||||| ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
1150685 |
tccatcatattccaaaacataaatccgacgtcgctatcgtcacaaataaaccaaggcgtatagtttgccgttttccatgcgtatttatctc |
1150595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 385 - 671
Target Start/End: Original strand, 29397927 - 29398208
Alignment:
| Q |
385 |
aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct--- |
481 |
Q |
| |
|
|||| ||| |||||||||||||||||||||| ||||| ||||| ||||||||| |||||| || | ||||||| || | ||||||| || || |
|
|
| T |
29397927 |
aattagaaatccgactgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaac-----aagcagacattgagctctgcatgatactttc |
29398021 |
T |
 |
| Q |
482 |
--aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagaca |
579 |
Q |
| |
|
|||||||| ||| |||||||| |||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
29398022 |
taaaacattttcaaatcattttt-cggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcggaca |
29398120 |
T |
 |
| Q |
580 |
taaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||| || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||| |
|
|
| T |
29398121 |
taa----gaaaaatacaatattttttacaattgtccataattaaattaaaccgacatttagttcaaattacacaaatgtttgaaattcatca |
29398208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 778 - 883
Target Start/End: Complemental strand, 38949855 - 38949750
Alignment:
| Q |
778 |
tataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtatt |
877 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
38949855 |
tataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgccgttttccatgcgtatt |
38949756 |
T |
 |
| Q |
878 |
catctc |
883 |
Q |
| |
|
|||||| |
|
|
| T |
38949755 |
catctc |
38949750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 312 - 574
Target Start/End: Complemental strand, 7190080 - 7189820
Alignment:
| Q |
312 |
tgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaact |
410 |
Q |
| |
|
||||||||||||||||||| | | ||||||| ||||||| || ||||||||| || | ||||||| | | | | || ||| |||| |||||||||||| |
|
|
| T |
7190080 |
tgttcccacattacataaggttgtgccacacgagtaaattacgtttttgccc-ctcggcagttaactgccgaagttttagaaatccggctgcagttaact |
7189982 |
T |
 |
| Q |
411 |
gccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggcca |
509 |
Q |
| |
|
||||| ||||| |||||||||||||| |||||| |||||| |||| ||||| | ||||||| |||||||| |||||||||| | |||||||||||| |
|
|
| T |
7189981 |
gccgaggaaaacttcggtagttaactgccgaggaaatctgatt--gcaggcagtgagctctgcatcattctaaaacatttccaagcc-ttttttcggcca |
7189885 |
T |
 |
| Q |
510 |
ttttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactc |
574 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||||| |
|
|
| T |
7189884 |
atttttacctgtaattaaaccagagcatttcgaaaggcagaacaattcatacaacattgaaactc |
7189820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 509 - 869
Target Start/End: Original strand, 25613344 - 25613697
Alignment:
| Q |
509 |
attttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttaca |
608 |
Q |
| |
|
|||| |||||||| ||| ||||| | || || || |||||| | || ||||||| | || ||| |||| ||||||||||| ||||||| |||||||||| |
|
|
| T |
25613344 |
atttattacctgtcattcaaccacatcaattccagaggcaatacaactcatacatcatttaaaatcagtcataaacaaga-aaatacataatcttttaca |
25613442 |
T |
 |
| Q |
609 |
attgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcatta |
708 |
Q |
| |
|
|||| ||| |||||||| || | | ||||| ||| |||||||| || |||||||||||||||||| |||| ||| | ||||| |||| ||||| |
|
|
| T |
25613443 |
attgaccaaaattaaatcaatcaggcattttgtttaaattacaagaatgtttgaaattcatcaaaatattaatgagtatttgaaattaatcaacacatta |
25613542 |
T |
 |
| Q |
709 |
cacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaa |
808 |
Q |
| |
|
|| ||||||| || ||| |||||| | |||||| | ||| |||| |||||||||||| | | ||||||||||||||||| | |||||| || |
|
|
| T |
25613543 |
catatcattacataaaa------tctctattgacattctatgcacatgcagatggaacgaacacaaagatataatatattatctttaattatattcataa |
25613636 |
T |
 |
| Q |
809 |
acataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcca |
869 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||||||| |||||| ||||||||||| |
|
|
| T |
25613637 |
acataaatcctacgtcgctatcgtcacgaataagtcaaggcacatagctcgccgttttcca |
25613697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 578 - 698
Target Start/End: Original strand, 3206957 - 3207077
Alignment:
| Q |
578 |
cataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacat |
677 |
Q |
| |
|
||||||||||| | ||||| ||||||||||||||||| |||||||||| |||||||||||| ||| ||| || ||||| ||||||||||||||||||| | |
|
|
| T |
3206957 |
cataaacaagaaagatacattatcttttacaattgtctataattaaatcaaaccgacatttagttcaaagtatacaaaagtttgaaattcatcaaaacgt |
3207056 |
T |
 |
| Q |
678 |
tacaaagtgtccatgattaaa |
698 |
Q |
| |
|
| || |||||||| |||||| |
|
|
| T |
3207057 |
tgcatggtgtccataattaaa |
3207077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 777 - 838
Target Start/End: Original strand, 43668499 - 43668560
Alignment:
| Q |
777 |
atataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaa |
838 |
Q |
| |
|
|||||||||||||||||| ||||||| | |||||||||||| ||||| |||||||| |||| |
|
|
| T |
43668499 |
atataatatattatcttcaaccatatgcctaaacataaatcctacgtcactatcgtcacgaa |
43668560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 382 - 434
Target Start/End: Complemental strand, 27276433 - 27276381
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaa |
434 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||| ||||| |||||| |
|
|
| T |
27276433 |
aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaa |
27276381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 445
Target Start/End: Complemental strand, 28472123 - 28472079
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaa |
445 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||| |||||| |
|
|
| T |
28472123 |
gcagttaactaccgaagaaaacctcggtagttaactgtcgaggaa |
28472079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 17424158 - 17424201
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
17424158 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
17424201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 43982225 - 43982268
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
43982225 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
43982268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 382 - 420
Target Start/End: Original strand, 24749700 - 24749738
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaa |
420 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
24749700 |
aggaatttgaattccgactgtagttaactgccgaggaaa |
24749738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 28477109 - 28477071
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
28477109 |
ctgcagttaactgccgaggaaaacctcggtagttaactg |
28477071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 403 - 437
Target Start/End: Original strand, 30493394 - 30493428
Alignment:
| Q |
403 |
agttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30493394 |
agttaactgccgaggaaaatctcggtagttaactg |
30493428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 35493383 - 35493345
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
35493383 |
ctgcagttaactgccgaggaaaatatcggtagttaactg |
35493345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0494 (Bit Score: 326; Significance: 0; HSPs: 2)
Name: scaffold0494
Description:
Target: scaffold0494; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 424 - 883
Target Start/End: Complemental strand, 5344 - 4890
Alignment:
| Q |
424 |
tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa |
523 |
Q |
| |
|
|||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
5344 |
tcggcagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttttcggccagtttttacctgtaa |
5245 |
T |
 |
| Q |
524 |
ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa |
623 |
Q |
| |
|
|||||||||| ||||| ||||||| ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5244 |
ttaaaccagagcatttccaaaggctaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaa |
5145 |
T |
 |
| Q |
624 |
attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt |
722 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
5144 |
attaaaccgacattttggttaaaattaaacaaacgtttgaaattcatgaaaacattacaaagtgtccataattaaactactcattacacatcatt----- |
5050 |
T |
 |
| Q |
723 |
aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg |
822 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5049 |
-aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg |
4951 |
T |
 |
| Q |
823 |
tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4950 |
tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc |
4890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0494; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 845 - 900
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||| | || ||| ||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
845 |
aggaatttgaaattcggctgtagttaactgccgaggaaaacctcggtagttaactg |
900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0201 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: scaffold0201
Description:
Target: scaffold0201; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 22417 - 22923
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct |
481 |
Q |
| |
|
||||||||||| | || |||||||||||||| || ||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||||||| |
|
|
| T |
22417 |
aggaatttgaaattcggctgcagttaactgctgaggaaaatctcggtagttaactgccgaggaaaactgattatgca--cagtgagttctgcataattct |
22514 |
T |
 |
| Q |
482 |
aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata |
581 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
22515 |
aaacatttccaagccattttttcggccaatttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata |
22614 |
T |
 |
| Q |
582 |
aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca |
681 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
22615 |
atcaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaaacaaacg-ttgaaattcatcaaaacattaca |
22713 |
T |
 |
| Q |
682 |
--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacg |
767 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
22714 |
aagtgttcataattaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcaaatggaacg |
22807 |
T |
 |
| Q |
768 |
aacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttc |
867 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
22808 |
aacatacatatataatataatattttccaccatattctgaaacataaatccgacgtcgccgtcgtcgcaaataagcaaaggcatatagcttgccgttttc |
22907 |
T |
 |
| Q |
868 |
catgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
22908 |
catgcgtattcatctc |
22923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 310; Significance: 1e-174; HSPs: 34)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 451 - 883
Target Start/End: Complemental strand, 31151054 - 31150629
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||||||| ||||||| || ||| ||||||||| ||||||| ||||| ||||| |||||||||| |
|
|
| T |
31151054 |
attatgcagactgtgggttctgcataattctaaatatttccaagccattttt-cgcccagtttttacctataattaatccagagcatttccaaaggcaaa |
31150956 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
31150955 |
ataattcatacaacattgaaactcggacataaacaaggtaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttccaattac |
31150856 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacg |
750 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |
|
|
| T |
31150855 |
acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcattaaat------taaatccctacatacattcaacg |
31150762 |
T |
 |
| Q |
751 |
caattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggca |
850 |
Q |
| |
|
||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31150761 |
caattgcatatcgatcaaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggca |
31150662 |
T |
 |
| Q |
851 |
tatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
31150661 |
tatagcttgccgttttccaagcgtattcatctc |
31150629 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 29286285 - 29286711
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
29286285 |
attatgcagacagtaggttctgcataattctaaagcatttccaagccatttt-tcggccagtttttacttgtaattaaaccagagcattttcaaaggcaa |
29286383 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| ||||||||||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
29286384 |
tataaatcatacaacgttgaaactcggtcttaaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatta |
29286483 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac |
749 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
29286484 |
cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcatt------aaattaaacctctacttacattcaac |
29286577 |
T |
 |
| Q |
750 |
gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc |
849 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29286578 |
gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc |
29286677 |
T |
 |
| Q |
850 |
atatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| ||||||||||| ||| |||||| |||| |
|
|
| T |
29286678 |
atatagtttgccgttttctatgtgtattcgtctc |
29286711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 13382662 - 13383150
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |
|
|
| T |
13382662 |
gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattgtaaacatttccaagccattt |
13382760 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
|| || ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||||| |
|
|
| T |
13382761 |
tt-cgaccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagtttgaaactcggacataataaagataactacaatat |
13382859 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca--------------tcaaaacattacaaagtg |
686 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13382860 |
cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaattaaactactcaaaacattacaaagtg |
13382959 |
T |
 |
| Q |
687 |
tccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatata |
786 |
Q |
| |
|
||||| ||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13382960 |
tccataattaaactactcattgcacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatata |
13383053 |
T |
 |
| Q |
787 |
ttatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
13383054 |
ttatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgacgttttccatgcgtattcatctc |
13383150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 23958921 - 23959399
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca |
497 |
Q |
| |
|
|||||||||| |||||| ||||| ||||||||||||||| ||| || |||| ||||||||||||||| ||||||||||||||||| |||||||||| || |
|
|
| T |
23958921 |
ctgcagttaaatgccgaggaaaacctcggtagttaactgccgagaaaaactggttatgcagacagtggattctgcataattctaaagcatttccaagcca |
23959020 |
T |
 |
| Q |
498 |
ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa |
597 |
Q |
| |
|
||||| || ||| |||||||||||||||||||||| ||||| ||||||||| |||| | ||||||| || |||||||| |||||||||| |||||||| |
|
|
| T |
23959021 |
ttttt-cgaccagattttacctgtaattaaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaa |
23959119 |
T |
 |
| Q |
598 |
tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa |
697 |
Q |
| |
|
||| |||||||||||| ||||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||| ||||| ||||||||| ||||| |
|
|
| T |
23959120 |
tattttttacaattgttcataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaatgttacatagtgtccataattaa |
23959219 |
T |
 |
| Q |
698 |
acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac |
797 |
Q |
| |
|
||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
23959220 |
acaacacattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttacac |
23959313 |
T |
 |
| Q |
798 |
catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23959314 |
catattccgaaacataaatccaacgtcgctatcgtcgtgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
23959399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 449 - 883
Target Start/End: Original strand, 1608373 - 1608803
Alignment:
| Q |
449 |
tgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggca |
548 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||| | | |
|
|
| T |
1608373 |
tgattatgcagacagcaggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaagta |
1608472 |
T |
 |
| Q |
549 |
aaataattcatac--aacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa |
646 |
Q |
| |
|
| |||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1608473 |
atataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaa |
1608572 |
T |
 |
| Q |
647 |
ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc |
746 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
1608573 |
ttaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattc |
1608666 |
T |
 |
| Q |
747 |
aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa |
846 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
1608667 |
aatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa |
1608766 |
T |
 |
| Q |
847 |
ggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1608767 |
ggcatatagcttgccgttttccatgcgtattcatctc |
1608803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 440 - 883
Target Start/End: Original strand, 7537258 - 7537709
Alignment:
| Q |
440 |
gaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccatt |
538 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
7537258 |
gaggaaaactgattatgcagacagtgaattctgcataattctaaagcatttccaagccatttt-tcggccagtttttacctgtaattaaaccagagcatt |
7537356 |
T |
 |
| Q |
539 |
ttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacattt |
638 |
Q |
| |
|
| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
7537357 |
tccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacattt |
7537456 |
T |
 |
| Q |
639 |
ggttaaaattacacaaacgtttgaaattcatcaaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaa |
724 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||| ||||||||| | |
|
|
| T |
7537457 |
ggttaaaattacacaaacgtttgaaattcatctaaacattacaaagtgtccataattaagtgtccataattaaacaaatcattgcacatcatt------a |
7537550 |
T |
 |
| Q |
725 |
aattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtc |
824 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
7537551 |
aattaaatccctacttacattcaacgcaaatgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtc |
7537650 |
T |
 |
| Q |
825 |
gctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| |
|
|
| T |
7537651 |
gctatcgtcgcgaataagccaaggcatataacttgctgttttccatgcgtattcgtctc |
7537709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 451 - 883
Target Start/End: Complemental strand, 25141096 - 25140669
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||| |||| ||||||| |||||| |||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
25141096 |
attatggagacagtgggttctgcataattctaaagcattttcaagccattttt-cggccaagttttacctgtaattaaaccagaacatttccaaaggcaa |
25140998 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta |
649 |
Q |
| |
|
|||| |||||||| ||||||||| | ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
25140997 |
tataaatcatacaatattgaaactcggccataaacaagaaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaatta |
25140898 |
T |
 |
| Q |
650 |
cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac |
749 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
25140897 |
aacaaacgtttgaaattcatcaacacgttacaaagtgtccataattaaacaactcattacacatcattaaat------taaatccctacttacattcaac |
25140804 |
T |
 |
| Q |
750 |
gcaattgcatatggaacgaacataca-tatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaagg |
848 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
25140803 |
gcaattgcatatggaacgaacatacattatataatatattatctttcaccatattccgaaacataaatgcgacgtcgctatcgtcacgaataagccaagg |
25140704 |
T |
 |
| Q |
849 |
catatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||| |
|
|
| T |
25140703 |
catatagcttgccgttttccatgtgtattcgtctc |
25140669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 452 - 883
Target Start/End: Complemental strand, 29667822 - 29667387
Alignment:
| Q |
452 |
ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||| || ||||||| ||||||| |||||| |||||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
29667822 |
ttatgcagacagtgggttttgcataattccaaagcacttccaagccattttt-cggccagtttttatctgtaatttaaccagagcattttcaaaggcaat |
29667724 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||| | ||||||| || |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| |
|
|
| T |
29667723 |
ataacttatacaacttttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatac |
29667624 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattc |
746 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||| |||||| | | |||||||||| |||||||||||| |
|
|
| T |
29667623 |
acaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaacaacacattacaactcattacacatcattaaattaaatccctacttacattc |
29667524 |
T |
 |
| Q |
747 |
aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa |
846 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||| |
|
|
| T |
29667523 |
aacgcaattgcatatggaacgaacatacatatataatatattaacttccaccatattccgaaacataaatctgacatcgctatcgtcacgaataagccaa |
29667424 |
T |
 |
| Q |
847 |
ggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29667423 |
ggcatatagcttgccgttttccatgcgtattcatctc |
29667387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 453 - 883
Target Start/End: Complemental strand, 18610221 - 18609797
Alignment:
| Q |
453 |
tatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaa |
551 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||| || ||||||| ||||||||||||||| ||||||||||||||| | |
|
|
| T |
18610221 |
tatgcagatagtgggttctgcataattctaaagcatttccaagccattttt-cggtcagtttttacatgtaattaaaccagagcattttcaaaggcaata |
18610123 |
T |
 |
| Q |
552 |
taattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaca |
651 |
Q |
| |
|
||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| |
|
|
| T |
18610122 |
taaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatctggttcgaattaca |
18610023 |
T |
 |
| Q |
652 |
caaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgc |
751 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| | |||||||| ||||||||||||| | | |
|
|
| T |
18610022 |
caaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatgatt------atattaaatccctacttacattcatcac |
18609929 |
T |
 |
| Q |
752 |
aattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcat |
851 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18609928 |
aattgcatatggaacgaacatacatatataatatataattttccaccatattccgaaacataaatccgacgtcgctatcgtctttaataagccaaggcat |
18609829 |
T |
 |
| Q |
852 |
atagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||| |||| |||||||||||| |||| ||||| |
|
|
| T |
18609828 |
ataacttgtcgttttccatgcatatttatctc |
18609797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 28362790 - 28362281
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactg-attatgcagacagtgggttctgcataattc |
480 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| ||||| |||| |||||||||| |||||| ||| ||||||||| ||||| |||||||||||||| |
|
|
| T |
28362790 |
aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgcagaggaaatctggattatgcaggcagtgtgttctgcataattc |
28362691 |
T |
 |
| Q |
481 |
taaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat |
580 |
Q |
| |
|
|||||||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||| |||||| || |||| ||||| ||| ||||||||| | ||| |
|
|
| T |
28362690 |
taaacatttccaagccattttt-cggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataaatcatataacattgaaactcggtcat |
28362592 |
T |
 |
| Q |
581 |
aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattac |
680 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||||||||| ||||||||||| || |||||||||| |||||| |||| |
|
|
| T |
28362591 |
aaacaagaaaaatacaatatcttttacagttgtctaaaattaaattaaaccgacatttggttcaaattacacaaccgattgaaattcaacaaaacgttac |
28362492 |
T |
 |
| Q |
681 |
aaag--------------tgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaac |
766 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||| |||||||||| |||| ||||||| || ||||||||||| || | |
|
|
| T |
28362491 |
aaagtgttcataattaaatgtccatcattaaacaactcattacacatcatt------aaattaaatccctacatacattctacacaattgcatatcgatc |
28362398 |
T |
 |
| Q |
767 |
gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt |
866 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||| |
|
|
| T |
28362397 |
gaacatacatatataatatattatcttccaccatattctgaaacataaattcgacgtcgctatcatcgcaaataagccaaggcatatagcttgccatttt |
28362298 |
T |
 |
| Q |
867 |
ccatgcgtattcatctc |
883 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
28362297 |
ccatgcttattcatctc |
28362281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 400 - 878
Target Start/End: Original strand, 2051060 - 2051545
Alignment:
| Q |
400 |
tgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcat |
498 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||| ||| |||||| || ||||||||||||||||||| ||||||||||||| ||||| |||| || |
|
|
| T |
2051060 |
tgcagttaactgccgaggaaaacctcggtagttatctgcagaggaaaaca-attatgcagacagtgggttatgcataattctaatgcattttcaag-caa |
2051157 |
T |
 |
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||||| |||||| ||||||||||| |||| ||||| ||||||||| |||| ||||||||| ||||||||| ||||| ||||| ||||||||| |
|
|
| T |
2051158 |
tttttcggccagtttttatctgtaattaaaacagagcatttccaaaggcaatataaatcatacaacattgaaactcgatcataaccaagaaaaatacaat |
2051257 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaac--------------attacaaag |
684 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| || | ||| |
|
|
| T |
2051258 |
atcttttacagttgtccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaattcatcaaaacgataaaaagtgttaataattaag |
2051357 |
T |
 |
| Q |
685 |
tgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataata |
784 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2051358 |
tgttcataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataata |
2051451 |
T |
 |
| Q |
785 |
tattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc |
878 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
2051452 |
tattatcttccaccatatttcgaaacataaatccgacgtcgccatcgtcgcgaataagccaagacatataacttgccgttttccatgcgtattc |
2051545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 401 - 725
Target Start/End: Complemental strand, 18351683 - 18351359
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt |
500 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
18351683 |
gcagttaactgccgaggaaaacctcggtagttaactgccgaagaaatctgattatgcagacagtgggttctgcataattctaaacatttccgagccattt |
18351584 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||||| |
|
|
| T |
18351583 |
tttcggccagtttttacctgtaattaaaccagagcattttcaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatat |
18351484 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca |
700 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
18351483 |
cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaact |
18351384 |
T |
 |
| Q |
701 |
actcattacacatcattaaattaaa |
725 |
Q |
| |
|
||| ||||||||||||||||||||| |
|
|
| T |
18351383 |
acttattacacatcattaaattaaa |
18351359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 310 - 669
Target Start/End: Complemental strand, 11840382 - 11840022
Alignment:
| Q |
310 |
gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa |
408 |
Q |
| |
|
|||||||||||||| |||||| || | ||||| ||||| ||| ||||||||| |||| |||||||| | | | | || ||| | || |||||||||| |
|
|
| T |
11840382 |
gttgttcccacattgcataaggctgtgacacacgagtaattgatgtttttgcccccttggtagttaactgccgaagttttagaaattcggctgcagttaa |
11840283 |
T |
 |
| Q |
409 |
ctgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggc |
507 |
Q |
| |
|
||| ||| ||||| ||||||||||||||| |||||| |||||||||||| ||||| | |||||||||||||||| |||||||||| ||||||| |||| |
|
|
| T |
11840282 |
ctgtcgaggaaaacctcggtagttaactgccgaggaaatctgattatgcaggcagtgagctctgcataattctaaaacatttccaagccattttt-cggc |
11840184 |
T |
 |
| Q |
508 |
cattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttac |
607 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
11840183 |
cagtttttacctgtaattaaaccagaacatttccaaaggcaaaataattcatacaacattgaaactcgaacataaacaagataaatacaatatcttttac |
11840084 |
T |
 |
| Q |
608 |
aattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat |
669 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
11840083 |
aattgttcataattaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattcat |
11840022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 385 - 671
Target Start/End: Complemental strand, 31771797 - 31771510
Alignment:
| Q |
385 |
aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa |
484 |
Q |
| |
|
|||| ||| |||| ||||||||||||||||| |||||||||||||||||| || |||||| | |||||||||||| || ||| ||| |||||||| |
|
|
| T |
31771797 |
aattagaaatccggctgcagttaactgccgaggaaaatctcggtagttaattgccgaggaaaataaattatgcagacaatgaactcttcatgattctaaa |
31771698 |
T |
 |
| Q |
485 |
-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaa |
583 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
31771697 |
acatttccaagccattttttcagccattttttacctttaattaaagtagatcatttcgaaaggcaaaataattcatacaacattgaaactcggacataaa |
31771598 |
T |
 |
| Q |
584 |
caagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
31771597 |
caagaaaaatacaatattttttacaattgttcataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatca |
31771510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 500 - 850
Target Start/End: Original strand, 34230611 - 34230956
Alignment:
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
|||||||||| ||||||||| ||||| ||||||| |||| ||||||||| | || |||||| || | |||||| |||||| || | ||||||| || |
|
|
| T |
34230611 |
ttttcggccagtttttacctataattcaaccagattatttgcaaaggcaattatagtcgtacaacatttatactcagtcataaagaataaaaatacatta |
34230710 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacg-tttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||| |||||||||||| || | |||||||||||||||||||||| | ||||||||| |||||| |
|
|
| T |
34230711 |
tcttttacaattgtctataattaaatcaaaccgacatttcgttaaaattacatgaatgctttgaaattcatcaaaacattaaagagtgtccataattaaa |
34230810 |
T |
 |
| Q |
699 |
caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc |
798 |
Q |
| |
|
|||| ||||||||||| || |||||||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
34230811 |
caacacattacacatcgtt------aaattaaatctctactaacattctacacagttgcagatggaacgaacatacatatataatatattatcttctacc |
34230904 |
T |
 |
| Q |
799 |
atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggca |
850 |
Q |
| |
|
||||||||||||||||||| |||||| ||||| || ||||||||||||||| |
|
|
| T |
34230905 |
atattctaaaacataaatcggacgtcactatcctcttgaataagccaaggca |
34230956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 429 - 671
Target Start/End: Complemental strand, 3502676 - 3502434
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa |
527 |
Q |
| |
|
||||||||| ||||||| |||||||||||| || || | ||||||| |||||||| ||||| |||||| |||||||||| | |||||||||||||||| |
|
|
| T |
3502676 |
agttaactgctgaggaaatctgattatgcaggcaatgagctctgcatcattctaaaacatttacaagtc-ttttttcggctagtttttacctgtaattac |
3502578 |
T |
 |
| Q |
528 |
accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta |
627 |
Q |
| |
|
|||||| ||||| |||||||||| |||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
3502577 |
accagagcatttcaaaaggcaaaacaattcatacaacattgaaacttggccataaacaagataaatacaatatcttttacaattgtccataattaaatca |
3502478 |
T |
 |
| Q |
628 |
aaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
3502477 |
aaccgacatttggttcaaattacacaaacgtttgaaattcatca |
3502434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 451 - 702
Target Start/End: Complemental strand, 26702692 - 26702451
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa |
550 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | | ||||||| ||| ||||||| |||||||||| |||| ||||| |||||||| |
|
|
| T |
26702692 |
attatgcagacagtgggttctgcataattctaaa---------gcccatttttcgaccaatttttacatgtaattaaatcagagcatttccaaaggcagt |
26702602 |
T |
 |
| Q |
551 |
ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac |
650 |
Q |
| |
|
|||| ||||||||| | |||| || | ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
26702601 |
ataaatcatacaacatagaaattcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaa-taaaccgacatttggttcaaattac |
26702503 |
T |
 |
| Q |
651 |
acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaac |
702 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
26702502 |
acaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaaacaac |
26702451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 621 - 883
Target Start/End: Original strand, 2259338 - 2259593
Alignment:
| Q |
621 |
taaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa |
720 |
Q |
| |
|
||||| |||||||||||||||| ||| | |||||| ||||||||||||||||| ||||| ||||||||| |||||||||| ||||||| | |||||| |
|
|
| T |
2259338 |
taaatgaaaccgacatttggttcaaaatgcacaaaatgttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattacaacttattaaa |
2259437 |
T |
 |
| Q |
721 |
ttaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccga |
820 |
Q |
| |
|
||||| || ||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||| || |
|
|
| T |
2259438 |
ttaaa------tccttacttacattcaacgta-ttgcatatggaacaaacatgcatatataatatattattttccaccatatttcgaaacataaatctga |
2259530 |
T |
 |
| Q |
821 |
cgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||| ||||| |||||||||| |||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
2259531 |
cgtcgctttcgtctttaataagccaatgcatatagcttgtcgttttctatgcgtattcatctc |
2259593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 500 - 849
Target Start/End: Complemental strand, 20448728 - 20448386
Alignment:
| Q |
500 |
ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata |
599 |
Q |
| |
|
||||||||| |||||| |||||||| ||||||| ||||| || |||||| |||| ||||||| | || | ||| || ||||||||||| |||||| || |
|
|
| T |
20448728 |
ttttcggcctatttttatctgtaattcaaccagagcatttacagaggcaatataactcatacaccatttatacttagtcataaacaagaagaatacatta |
20448629 |
T |
 |
| Q |
600 |
tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac |
699 |
Q |
| |
|
||||||||| |||||||||||||||| || ||||||||| |||||||||| | || ||||||||||||| ||||||||| | ||||||||| ||||||| |
|
|
| T |
20448628 |
tcttttacagttgtccataattaaatcaatccgacatttcgttaaaattagaggaatgtttgaaattcataaaaacattaaagagtgtccataattaaac |
20448529 |
T |
 |
| Q |
700 |
aactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacca |
799 |
Q |
| |
|
||| |||| || |||||| | || |||| |||| |||||| || || ||||| ||| ||| |||| ||||||||||||||||||||| || || |
|
|
| T |
20448528 |
aacacatttcatatcatt------acataaaatatctatcgacattctacacatttgcaaatgtaacaaacacacatatataatatattatctt-caaca |
20448436 |
T |
 |
| Q |
800 |
tattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc |
849 |
Q |
| |
|
||| | |||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
20448435 |
tatacctaaacataaatgaaacgtcgctatcgtcacgaataagccaaggc |
20448386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 451 - 623
Target Start/End: Original strand, 2258368 - 2258540
Alignment:
| Q |
451 |
attatgcagacagtgggttctgcataattctaaaca-tttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa |
549 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| | ||| |||||||||||| | | || |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
2258368 |
attatgcagacagtgaattctgcataattctaaagaattttcaagtcattttt-cagtcagattttacttgtaattaaaccagagcattttcaaaggcaa |
2258466 |
T |
 |
| Q |
550 |
aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa |
623 |
Q |
| |
|
|||| ||||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2258467 |
tataactcatacaacatttaaactcagtcataaacaagaaaaatacaatatcttttacaattgtccataattaa |
2258540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 501 - 642
Target Start/End: Original strand, 8304570 - 8304711
Alignment:
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| ||||| ||||| ||| ||| ||||||||| || |||||| ||||||||||| ||||||| ||| |
|
|
| T |
8304570 |
tttcggccagtttttacatgtaattaaaccagagcatttccaaagccaatatacctcatacaacatttgcactcagtcataaacaagaaaaatacattat |
8304669 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggtt |
642 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8304670 |
cttttacaattgtccataattaaatcaaaccgacatttggtt |
8304711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 510 - 691
Target Start/End: Complemental strand, 20439936 - 20439755
Alignment:
| Q |
510 |
ttttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaa |
609 |
Q |
| |
|
|||||||||||| ||| ||||||| ||||| || |||||| | || ||||||| | || | ||| || ||||||||||| |||||| ||||||||||| |
|
|
| T |
20439936 |
ttttttacctgttattcaaccagagcatttccagaggcaatacaactcatacaccatttatacttagtcataaacaagaggaatacattatcttttacag |
20439837 |
T |
 |
| Q |
610 |
ttgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccat |
691 |
Q |
| |
|
|||||||||||||||| || ||||||||| |||||||||||| || ||||||||||||| ||||||||| | ||||||||| |
|
|
| T |
20439836 |
ttgtccataattaaatcaatccgacattttgttaaaattacaggaatgtttgaaattcatgaaaacattaaagagtgtccat |
20439755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 511 - 679
Target Start/End: Original strand, 19129120 - 19129285
Alignment:
| Q |
511 |
tttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaat |
610 |
Q |
| |
|
||||||||||||||||||||| | ||||| || | |||| | || ||| ||| | || | |||||| ||||||||||| || || ||||||||||| | |
|
|
| T |
19129120 |
tttttacctgtaattaaaccacaacatttccagatgcaataaaactcacacaccatttatactcagtcataaacaaga---atgcattatcttttacagt |
19129216 |
T |
 |
| Q |
611 |
tgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacatta |
679 |
Q |
| |
|
||||||||||||||| || | ||||||| ||| ||||||||| || ||||||||||||||||||||||| |
|
|
| T |
19129217 |
tgtccataattaaatcaatctgacatttcgttgaaattacacgaatgtttgaaattcatcaaaacatta |
19129285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 510 - 679
Target Start/End: Complemental strand, 20436228 - 20436059
Alignment:
| Q |
510 |
ttttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaa |
609 |
Q |
| |
|
|||||||||||| ||| ||||||| ||||| || || || | |||||||||| | || | ||| || ||||||||||| |||||| ||||||||||| |
|
|
| T |
20436228 |
ttttttacctgttattcaaccagagcatttccagagaaaatacaattcatacaccatttatacttagtcataaacaagaggaatacattatcttttacag |
20436129 |
T |
 |
| Q |
610 |
ttgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacatta |
679 |
Q |
| |
|
|||||||| ||||||| || ||||||||| ||||||||||| || ||||||||||||| ||||||||| |
|
|
| T |
20436128 |
ttgtccatgattaaatcaatccgacattttattaaaattacatgaatgtttgaaattcatgaaaacatta |
20436059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 847
Target Start/End: Original strand, 19129549 - 19129642
Alignment:
| Q |
755 |
tgcatatggaac-gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaag |
847 |
Q |
| |
|
|||| ||||||| ||||| |||||||||||||||||| ||| | ||||| | |||||||||| ||||||| |||||| ||||||||||||| |
|
|
| T |
19129549 |
tgcagatggaacagaacacacatatataatatattatattcaatcatatgcctaaacataaatgaaacgtcgcaatcgtcacgaataagccaag |
19129642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 27616748 - 27616784
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
27616748 |
gcagttaactgccgaagaaaacctcggtagttaactg |
27616784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 6204853 - 6204896
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
6204853 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
6204896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 11691820 - 11691863
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
11691820 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
11691863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 22305134 - 22305177
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
22305134 |
tccggctgcagttaactgccgaggaaaacctcggtagttaactg |
22305177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 31146387 - 31146442
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||| |||| ||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
31146387 |
aggaatttgaaatccggctgcagttaactgtcgaggaaaacatcggtagttaactg |
31146442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 437
Target Start/End: Complemental strand, 32643592 - 32643525
Alignment:
| Q |
370 |
agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||| | ||||||||| || |||| ||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
32643592 |
agttaactgccaaggaattaaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactg |
32643525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 17596972 - 17597009
Alignment:
| Q |
399 |
ctgcagttaactgccgaagaaaatctcggtagttaact |
436 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
17596972 |
ctgcagttaactgccgaggaaaatctcggcagttaact |
17597009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 24088825 - 24088784
Alignment:
| Q |
402 |
cagttaactgccgaagaaaatctcggtagttaactgttgagg |
443 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||| |||| |
|
|
| T |
24088825 |
cagttaactgtcgaggaaaatctcggtagttaactgtcgagg |
24088784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 438
Target Start/End: Complemental strand, 24721998 - 24721961
Alignment:
| Q |
401 |
gcagttaactgccgaagaaaatctcggtagttaactgt |
438 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
24721998 |
gcagttaactgccgaggaaaacctcggtagttaactgt |
24721961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0513 (Bit Score: 277; Significance: 1e-154; HSPs: 1)
Name: scaffold0513
Description:
Target: scaffold0513; HSP #1
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 370 - 777
Target Start/End: Original strand, 8201 - 8602
Alignment:
| Q |
370 |
agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggtt |
469 |
Q |
| |
|
||||||| | ||||||||||||| |||| ||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
8201 |
agttaactgccaaggaatttgaaatccggatgcagttaactgctgaagaaaacctcggtagttaactgccaaggaaaactgattatgcagacagtgggtt |
8300 |
T |
 |
| Q |
470 |
ctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttga |
569 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||| |
|
|
| T |
8301 |
ctgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaaccaaagcatttccaaaggcaaaataattcatacaagattga |
8400 |
T |
 |
| Q |
570 |
aactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat |
669 |
Q |
| |
|
||||| | ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8401 |
aactcgggcataatcaagataagtacaatatcttttacaattgttcataattaaattaaaccaacatttggttaaaattaaacaaacgtttgaaattcat |
8500 |
T |
 |
| Q |
670 |
caaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaa |
769 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8501 |
caaaacattacaaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaa |
8594 |
T |
 |
| Q |
770 |
catacata |
777 |
Q |
| |
|
|||||||| |
|
|
| T |
8595 |
catacata |
8602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0219 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: scaffold0219
Description:
Target: scaffold0219; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 402 - 801
Target Start/End: Complemental strand, 20151 - 19743
Alignment:
| Q |
402 |
cagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattt |
500 |
Q |
| |
|
|||||||||| ||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
20151 |
cagttaactgtcgaggaaatcctcggtagtttactgccgaggaaaactgattatgcagacagtgggttctgcataattctaaagcatttccaagcttttt |
20052 |
T |
 |
| Q |
501 |
tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat |
600 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
20051 |
tttcggtcagtttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatat |
19952 |
T |
 |
| Q |
601 |
cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca--------------aagtg |
686 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
19951 |
cttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatcaaaacgttacaaagtggccgtaattaagtg |
19852 |
T |
 |
| Q |
687 |
tccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatata |
786 |
Q |
| |
|
| ||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19851 |
ttcataattaaacaactcattgcacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgagcatacatatataatata |
19758 |
T |
 |
| Q |
787 |
ttatcttccaccata |
801 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
19757 |
ttatcttccaccata |
19743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0219; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 807 - 883
Target Start/End: Complemental strand, 19574 - 19498
Alignment:
| Q |
807 |
aaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
19574 |
aaacataaatctgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctc |
19498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 152; Significance: 5e-80; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 499 - 880
Target Start/End: Original strand, 21780 - 22144
Alignment:
| Q |
499 |
tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat |
598 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||| |||| |||| |||| |||||||| ||||||||| || ||||||||| |
|
|
| T |
21780 |
tttttcggccagtttttacctgtaattaaaccagagcatttccaaaagcaatataaatcatacaatattgaaactc------------gaaaaatacaat |
21867 |
T |
 |
| Q |
599 |
atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa |
698 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||| |
|
|
| T |
21868 |
atcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttaaaaagtgtccataattaaa |
21967 |
T |
 |
| Q |
699 |
caactcattacacatcattaaa----ttaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttc |
794 |
Q |
| |
|
|||| ||||||| |||||| | | | |||||||| ||||||||||||| | |||||||||||||||||||||||||||||| | ||| |
|
|
| T |
21968 |
caacacattacaactcattacacatcattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatat---------ttttc |
22058 |
T |
 |
| Q |
795 |
caccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcat |
880 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||| ||| ||||||||||| |||||| |||| | |||||||||||||||||| |
|
|
| T |
22059 |
caccatattccaaaacataaattcgacgtcgctattgtctttaataagccaagacatataacttgtcattttccatgcgtattcat |
22144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 147; Significance: 5e-77; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 403 - 671
Target Start/End: Complemental strand, 236272 - 236006
Alignment:
| Q |
403 |
agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatttt |
501 |
Q |
| |
|
|||||||||| || ||||| |||||||||||||| |||||| |||||| |||||||||| | ||||||| |||||||| ||||||||| | |||| |
|
|
| T |
236272 |
agttaactgcagaggaaaacttcggtagttaactgccgaggaaatctgatt--gcagacagtgagctctgcatcattctaaaacatttccaaacc-tttt |
236176 |
T |
 |
| Q |
502 |
ttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatc |
601 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
236175 |
ttcgaccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaatattgaaactcagacataaacaagataaatacaatatc |
236076 |
T |
 |
| Q |
602 |
ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca |
671 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
236075 |
ttttacaattgtccataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattcatca |
236006 |
T |
 |
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Target: scaffold0199 (Bit Score: 131; Significance: 2e-67; HSPs: 2)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 462 - 671
Target Start/End: Original strand, 12497 - 12706
Alignment:
| Q |
462 |
agtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcata |
560 |
Q |
| |
|
|||| ||| ||||| |||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||| ||||| ||| |||||| |||||||| |
|
|
| T |
12497 |
agtgagttttgcatcattctaaaacatttccaagcc-ttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaagcaaaacaattcata |
12595 |
T |
 |
| Q |
561 |
caacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgttt |
660 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
12596 |
caacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacattttgtttaaattacacaaacgttt |
12695 |
T |
 |
| Q |
661 |
gaaattcatca |
671 |
Q |
| |
|
|||||||||| |
|
|
| T |
12696 |
aaaattcatca |
12706 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 12435 - 12392
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
12435 |
tccggctgcagttaactgccgatgaaaacctcggtagttaactg |
12392 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0169 (Bit Score: 129; Significance: 3e-66; HSPs: 2)
Name: scaffold0169
Description:
Target: scaffold0169; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 735 - 883
Target Start/End: Complemental strand, 10976 - 10828
Alignment:
| Q |
735 |
ctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcg |
834 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
10976 |
ctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgtca |
10877 |
T |
 |
| Q |
835 |
cgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10876 |
cgaataagccaaggcatatagcttgctgttttccatgcgtattcatctc |
10828 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0169; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 429 - 608
Target Start/End: Complemental strand, 1695 - 1517
Alignment:
| Q |
429 |
agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa |
527 |
Q |
| |
|
||||||||| ||||||| || |||||||||||||||||||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
1695 |
agttaactgctgaggaaaaca-attatgcagacagtgggttctgcataattctatagcatttccaagccattttt-cggccagtttttacctgtaattaa |
1598 |
T |
 |
| Q |
528 |
accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttaca |
608 |
Q |
| |
|
|||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||||||||||||||| |
|
|
| T |
1597 |
accagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttaca |
1517 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0794 (Bit Score: 110; Significance: 6e-55; HSPs: 1)
Name: scaffold0794
Description:
Target: scaffold0794; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 726 - 883
Target Start/End: Complemental strand, 1472 - 1315
Alignment:
| Q |
726 |
attaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcg |
825 |
Q |
| |
|
|||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
1472 |
attaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaacataaatccgacgtcg |
1373 |
T |
 |
| Q |
826 |
ctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc |
883 |
Q |
| |
|
|||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1372 |
ctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctc |
1315 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0341
Description:
Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 17410 - 17355
Alignment:
| Q |
382 |
aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
17410 |
aggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactg |
17355 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0184 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0184
Description:
Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 18340 - 18297
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||| |||| ||||||||| ||||||||||||||| |
|
|
| T |
18340 |
tccgactgcagtttactgtcgaagaaaacctcggtagttaactg |
18297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 54504 - 54547
Alignment:
| Q |
394 |
tccgactgcagttaactgccgaagaaaatctcggtagttaactg |
437 |
Q |
| |
|
||||||||||||| |||| ||||||||| ||||||||||||||| |
|
|
| T |
54504 |
tccgactgcagtttactgtcgaagaaaacctcggtagttaactg |
54547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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