View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11563_low_1 (Length: 896)

Name: NF11563_low_1
Description: NF11563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11563_low_1
NF11563_low_1
[»] chr1 (66 HSPs)
chr1 (382-883)||(44469575-44470070)
chr1 (345-883)||(50113284-50113830)
chr1 (394-883)||(9710604-9711086)
chr1 (429-883)||(29352294-29352742)
chr1 (429-883)||(30909593-30910041)
chr1 (401-882)||(20353500-20353975)
chr1 (441-883)||(13633436-13633873)
chr1 (401-883)||(3944007-3944484)
chr1 (401-883)||(3993406-3993883)
chr1 (401-883)||(38771662-38772140)
chr1 (483-883)||(37018960-37019353)
chr1 (451-883)||(8459040-8459466)
chr1 (427-883)||(7966042-7966497)
chr1 (429-883)||(51666230-51666677)
chr1 (399-883)||(1655644-1656131)
chr1 (524-883)||(5081928-5082283)
chr1 (402-883)||(25039645-25040115)
chr1 (451-883)||(19495122-19495562)
chr1 (399-881)||(36072400-36072879)
chr1 (429-883)||(12643291-12643714)
chr1 (401-725)||(15051064-15051388)
chr1 (399-883)||(13177690-13178174)
chr1 (528-883)||(6558047-6558410)
chr1 (394-691)||(46886138-46886434)
chr1 (399-883)||(38689962-38690417)
chr1 (451-882)||(4517959-4518406)
chr1 (451-882)||(5141435-5141851)
chr1 (464-883)||(46978798-46979235)
chr1 (118-315)||(50113033-50113229)
chr1 (571-883)||(33168106-33168422)
chr1 (451-671)||(52805330-52805549)
chr1 (403-671)||(470840-471108)
chr1 (448-671)||(94477-94700)
chr1 (455-671)||(31780054-31780270)
chr1 (482-671)||(22527465-22527653)
chr1 (451-672)||(22345818-22346034)
chr1 (382-573)||(23359217-23359408)
chr1 (482-672)||(19521711-19521900)
chr1 (451-667)||(21144405-21144621)
chr1 (499-671)||(16281828-16281999)
chr1 (499-668)||(50617333-50617503)
chr1 (382-500)||(6557929-6558046)
chr1 (633-773)||(1179878-1180022)
chr1 (399-484)||(29261445-29261529)
chr1 (354-437)||(52802116-52802199)
chr1 (499-651)||(47714877-47715029)
chr1 (382-437)||(6562165-6562220)
chr1 (395-438)||(41804036-41804079)
chr1 (370-437)||(44336251-44336318)
chr1 (394-443)||(11183212-11183261)
chr1 (382-437)||(8460101-8460155)
chr1 (394-437)||(13636126-13636169)
chr1 (382-437)||(15047296-15047351)
chr1 (370-421)||(30910023-30910074)
chr1 (399-437)||(16270029-16270067)
chr1 (381-459)||(19521622-19521700)
chr1 (579-677)||(25234008-25234106)
chr1 (535-605)||(29261531-29261601)
chr1 (310-362)||(253356-253409)
chr1 (310-362)||(20114546-20114599)
chr1 (400-437)||(26633559-26633596)
chr1 (310-362)||(26944420-26944473)
chr1 (310-362)||(32161371-32161424)
chr1 (369-422)||(41453839-41453892)
chr1 (310-362)||(44596802-44596855)
chr1 (401-434)||(50117853-50117886)
[»] scaffold0116 (1 HSPs)
scaffold0116 (382-883)||(15519-16014)
[»] chr7 (32 HSPs)
chr7 (429-883)||(47742553-47743001)
chr7 (424-883)||(15069914-15070368)
chr7 (401-883)||(603812-604288)
chr7 (447-883)||(18109357-18109788)
chr7 (395-878)||(34622526-34623002)
chr7 (424-883)||(42503402-42503856)
chr7 (401-883)||(30790570-30791048)
chr7 (401-883)||(45767424-45767901)
chr7 (449-883)||(43619760-43620189)
chr7 (382-883)||(19044308-19044815)
chr7 (382-883)||(20709821-20710328)
chr7 (399-882)||(10705279-10705765)
chr7 (355-666)||(29592530-29592841)
chr7 (429-679)||(40928715-40928965)
chr7 (451-880)||(12111283-12111729)
chr7 (382-669)||(34742168-34742454)
chr7 (601-883)||(47064858-47065148)
chr7 (455-671)||(17838405-17838621)
chr7 (724-883)||(29592852-29593011)
chr7 (417-671)||(13323485-13323739)
chr7 (429-671)||(5537907-5538147)
chr7 (590-671)||(10522285-10522366)
chr7 (382-437)||(42499423-42499478)
chr7 (394-437)||(17840894-17840937)
chr7 (310-420)||(29593349-29593460)
chr7 (401-445)||(15074224-15074268)
chr7 (394-437)||(9367728-9367771)
chr7 (451-525)||(36186416-36186490)
chr7 (382-437)||(40587675-40587730)
chr7 (399-437)||(30355243-30355281)
chr7 (396-437)||(35606817-35606858)
chr7 (310-362)||(40323209-40323262)
[»] chr5 (52 HSPs)
chr5 (382-883)||(25890008-25890503)
chr5 (382-883)||(34122538-34123047)
chr5 (429-883)||(27863464-27863912)
chr5 (429-883)||(13563702-13564150)
chr5 (401-883)||(37814615-37815091)
chr5 (424-883)||(38855771-38856224)
chr5 (423-825)||(34079753-34080149)
chr5 (382-883)||(7017526-7018007)
chr5 (424-883)||(11029064-11029516)
chr5 (499-883)||(7796708-7797086)
chr5 (440-883)||(28882066-28882497)
chr5 (423-883)||(1039356-1039823)
chr5 (400-883)||(33994713-33995189)
chr5 (452-883)||(24053237-24053672)
chr5 (452-883)||(24050110-24050547)
chr5 (399-833)||(25877652-25878089)
chr5 (382-653)||(28388307-28388578)
chr5 (655-883)||(14280542-14280764)
chr5 (400-671)||(7762013-7762285)
chr5 (451-883)||(30352510-30352939)
chr5 (413-671)||(38407192-38407449)
chr5 (399-671)||(41799539-41799809)
chr5 (644-883)||(4196792-4197023)
chr5 (506-834)||(6267612-6267933)
chr5 (724-882)||(28387821-28387978)
chr5 (753-883)||(43179429-43179559)
chr5 (451-603)||(4196637-4196790)
chr5 (500-710)||(43179631-43179841)
chr5 (401-560)||(14280781-14280940)
chr5 (312-437)||(7757268-7757394)
chr5 (310-422)||(13568094-13568207)
chr5 (310-437)||(34123939-34124067)
chr5 (394-445)||(17966882-17966933)
chr5 (384-433)||(41798834-41798883)
chr5 (355-435)||(39743154-39743234)
chr5 (370-437)||(542794-542861)
chr5 (382-437)||(28387283-28387338)
chr5 (399-437)||(25497542-25497580)
chr5 (399-444)||(11346038-11346083)
chr5 (400-436)||(8052-8088)
chr5 (401-437)||(8577007-8577043)
chr5 (573-665)||(16440192-16440284)
chr5 (354-437)||(4204215-4204296)
chr5 (394-437)||(19037474-19037517)
chr5 (382-437)||(25897083-25897138)
chr5 (399-438)||(41201759-41201798)
chr5 (400-442)||(30354395-30354437)
chr5 (401-451)||(30708863-30708913)
chr5 (396-437)||(5804-5845)
chr5 (605-674)||(30292313-30292382)
chr5 (451-484)||(31094618-31094651)
chr5 (355-436)||(34682244-34682325)
[»] chr8 (41 HSPs)
chr8 (355-883)||(35962294-35962816)
chr8 (429-883)||(39518-39966)
chr8 (401-883)||(23923995-23924474)
chr8 (412-883)||(31959611-31960090)
chr8 (401-883)||(7344120-7344597)
chr8 (401-883)||(32375684-32376161)
chr8 (401-883)||(8419437-8419914)
chr8 (466-883)||(30301231-30301644)
chr8 (451-883)||(43376843-43377283)
chr8 (417-883)||(43679446-43679905)
chr8 (451-883)||(2124260-2124703)
chr8 (578-883)||(22588006-22588305)
chr8 (440-768)||(20548938-20549259)
chr8 (453-860)||(4867380-4867791)
chr8 (590-883)||(7171881-7172178)
chr8 (452-787)||(39751144-39751473)
chr8 (511-883)||(22661138-22661504)
chr8 (394-671)||(34366937-34367214)
chr8 (429-666)||(41743925-41744162)
chr8 (724-883)||(41744173-41744332)
chr8 (451-639)||(23578517-23578705)
chr8 (452-670)||(41238932-41239150)
chr8 (535-802)||(30972519-30972780)
chr8 (779-878)||(39751659-39751758)
chr8 (429-551)||(1116105-1116226)
chr8 (500-869)||(31280942-31281305)
chr8 (447-587)||(7172465-7172607)
chr8 (310-436)||(44052231-44052358)
chr8 (337-445)||(35966745-35966853)
chr8 (401-492)||(17924232-17924323)
chr8 (355-421)||(41743877-41743943)
chr8 (314-437)||(39601649-39601773)
chr8 (451-529)||(22588311-22588389)
chr8 (394-437)||(40077254-40077297)
chr8 (385-437)||(1114760-1114812)
chr8 (394-437)||(22550869-22550912)
chr8 (398-437)||(41016444-41016483)
chr8 (370-415)||(1116214-1116259)
chr8 (401-438)||(39491140-39491177)
chr8 (399-436)||(41855399-41855436)
chr8 (400-437)||(42602492-42602529)
[»] chr4 (44 HSPs)
chr4 (401-883)||(3407803-3408280)
chr4 (440-882)||(37394768-37395218)
chr4 (382-883)||(19069201-19069709)
chr4 (401-883)||(49563873-49564351)
chr4 (403-883)||(10422972-10423444)
chr4 (399-883)||(38460457-38460934)
chr4 (399-877)||(44050650-44051134)
chr4 (451-883)||(4774168-4774604)
chr4 (569-883)||(10374240-10374548)
chr4 (452-883)||(18578706-18579141)
chr4 (382-673)||(15995736-15996026)
chr4 (457-791)||(50904819-50905147)
chr4 (310-671)||(51492013-51492374)
chr4 (602-883)||(24415392-24415679)
chr4 (401-671)||(37015931-37016201)
chr4 (527-781)||(51642165-51642423)
chr4 (511-856)||(6186789-6187140)
chr4 (429-671)||(50278593-50278836)
chr4 (429-671)||(44674199-44674440)
chr4 (726-883)||(11506658-11506815)
chr4 (500-848)||(30043022-30043373)
chr4 (400-606)||(24414867-24415072)
chr4 (382-437)||(1041949-1042004)
chr4 (382-437)||(9890008-9890063)
chr4 (337-437)||(33383774-33383874)
chr4 (394-437)||(55407797-55407840)
chr4 (383-437)||(19073659-19073713)
chr4 (394-444)||(28081484-28081534)
chr4 (385-437)||(15999803-15999855)
chr4 (401-437)||(21018067-21018103)
chr4 (401-437)||(26792248-26792284)
chr4 (401-437)||(40354638-40354674)
chr4 (394-437)||(6178114-6178157)
chr4 (394-437)||(49094110-49094153)
chr4 (355-445)||(8109378-8109468)
chr4 (382-420)||(9491280-9491318)
chr4 (399-437)||(11494574-11494612)
chr4 (399-437)||(20208541-20208579)
chr4 (399-437)||(21022892-21022930)
chr4 (337-415)||(39588061-39588139)
chr4 (399-437)||(39590572-39590610)
chr4 (399-437)||(44561334-44561372)
chr4 (400-437)||(958598-958635)
chr4 (310-362)||(44674106-44674159)
[»] chr3 (52 HSPs)
chr3 (394-883)||(48246438-48246920)
chr3 (382-883)||(4002055-4002564)
chr3 (429-883)||(13743328-13743775)
chr3 (401-883)||(6744890-6745366)
chr3 (448-883)||(9426685-9427114)
chr3 (401-883)||(30943222-30943700)
chr3 (401-883)||(8156541-8157018)
chr3 (382-883)||(36812850-36813360)
chr3 (448-883)||(2857546-2857975)
chr3 (470-883)||(46989614-46990035)
chr3 (401-883)||(3952778-3953255)
chr3 (429-883)||(50957243-50957704)
chr3 (399-883)||(6489360-6489852)
chr3 (451-880)||(21951882-21952305)
chr3 (425-883)||(14402569-14403012)
chr3 (431-753)||(7841158-7841474)
chr3 (447-883)||(66952-67392)
chr3 (605-883)||(2743678-2743964)
chr3 (401-671)||(600314-600584)
chr3 (401-671)||(42166182-42166450)
chr3 (469-671)||(36134053-36134255)
chr3 (382-671)||(50213471-50213760)
chr3 (403-671)||(47070503-47070771)
chr3 (429-671)||(16646944-16647185)
chr3 (403-666)||(52387833-52388097)
chr3 (469-669)||(9473721-9473921)
chr3 (407-671)||(2271395-2271658)
chr3 (382-582)||(2743412-2743611)
chr3 (407-582)||(4004885-4005058)
chr3 (310-437)||(48250873-48251001)
chr3 (343-437)||(46989522-46989616)
chr3 (578-677)||(7314586-7314685)
chr3 (382-445)||(14398549-14398612)
chr3 (394-437)||(48888766-48888809)
chr3 (310-444)||(55385078-55385213)
chr3 (310-362)||(1388183-1388236)
chr3 (310-437)||(43476132-43476261)
chr3 (335-436)||(49219796-49219897)
chr3 (401-445)||(8475859-8475903)
chr3 (401-437)||(49144460-49144496)
chr3 (394-437)||(2647703-2647746)
chr3 (423-470)||(7839472-7839519)
chr3 (394-437)||(34049106-34049149)
chr3 (394-445)||(50998676-50998727)
chr3 (394-437)||(54389821-54389864)
chr3 (401-451)||(2647762-2647812)
chr3 (399-437)||(19440287-19440325)
chr3 (399-437)||(41579728-41579766)
chr3 (399-437)||(41803029-41803067)
chr3 (310-362)||(5136527-5136580)
chr3 (382-415)||(23443132-23443165)
chr3 (385-434)||(49217112-49217161)
[»] chr2 (42 HSPs)
chr2 (382-883)||(24753588-24754083)
chr2 (370-883)||(3795339-3795859)
chr2 (401-883)||(7267008-7267484)
chr2 (424-883)||(39798004-39798456)
chr2 (399-883)||(28342554-28343032)
chr2 (429-883)||(1096630-1097092)
chr2 (401-883)||(41564054-41564532)
chr2 (451-883)||(41181493-41181919)
chr2 (403-883)||(5351295-5351770)
chr2 (399-883)||(43943720-43944210)
chr2 (449-883)||(45479385-45479813)
chr2 (425-883)||(209041-209494)
chr2 (449-883)||(10620054-10620483)
chr2 (369-883)||(24601640-24602160)
chr2 (369-883)||(24611954-24612474)
chr2 (399-883)||(9659604-9660097)
chr2 (447-882)||(12905601-12906037)
chr2 (451-883)||(41052704-41053142)
chr2 (399-883)||(41004559-41005045)
chr2 (471-883)||(439374-439792)
chr2 (369-883)||(81814-82333)
chr2 (429-781)||(38950232-38950565)
chr2 (401-725)||(18000265-18000590)
chr2 (406-671)||(10825256-10825521)
chr2 (370-666)||(25184606-25184900)
chr2 (407-671)||(39950941-39951203)
chr2 (499-671)||(32952861-32953033)
chr2 (693-883)||(1150595-1150779)
chr2 (385-671)||(29397927-29398208)
chr2 (778-883)||(38949750-38949855)
chr2 (312-574)||(7189820-7190080)
chr2 (509-869)||(25613344-25613697)
chr2 (578-698)||(3206957-3207077)
chr2 (777-838)||(43668499-43668560)
chr2 (382-434)||(27276381-27276433)
chr2 (401-445)||(28472079-28472123)
chr2 (394-437)||(17424158-17424201)
chr2 (394-437)||(43982225-43982268)
chr2 (382-420)||(24749700-24749738)
chr2 (399-437)||(28477071-28477109)
chr2 (403-437)||(30493394-30493428)
chr2 (399-437)||(35493345-35493383)
[»] scaffold0494 (2 HSPs)
scaffold0494 (424-883)||(4890-5344)
scaffold0494 (382-437)||(845-900)
[»] scaffold0201 (1 HSPs)
scaffold0201 (382-883)||(22417-22923)
[»] chr6 (34 HSPs)
chr6 (451-883)||(31150629-31151054)
chr6 (451-883)||(29286285-29286711)
chr6 (401-883)||(13382662-13383150)
chr6 (399-883)||(23958921-23959399)
chr6 (449-883)||(1608373-1608803)
chr6 (440-883)||(7537258-7537709)
chr6 (451-883)||(25140669-25141096)
chr6 (452-883)||(29667387-29667822)
chr6 (453-883)||(18609797-18610221)
chr6 (382-883)||(28362281-28362790)
chr6 (400-878)||(2051060-2051545)
chr6 (401-725)||(18351359-18351683)
chr6 (310-669)||(11840022-11840382)
chr6 (385-671)||(31771510-31771797)
chr6 (500-850)||(34230611-34230956)
chr6 (429-671)||(3502434-3502676)
chr6 (451-702)||(26702451-26702692)
chr6 (621-883)||(2259338-2259593)
chr6 (500-849)||(20448386-20448728)
chr6 (451-623)||(2258368-2258540)
chr6 (501-642)||(8304570-8304711)
chr6 (510-691)||(20439755-20439936)
chr6 (511-679)||(19129120-19129285)
chr6 (510-679)||(20436059-20436228)
chr6 (755-847)||(19129549-19129642)
chr6 (401-437)||(27616748-27616784)
chr6 (394-437)||(6204853-6204896)
chr6 (394-437)||(11691820-11691863)
chr6 (394-437)||(22305134-22305177)
chr6 (382-437)||(31146387-31146442)
chr6 (370-437)||(32643525-32643592)
chr6 (399-436)||(17596972-17597009)
chr6 (402-443)||(24088784-24088825)
chr6 (401-438)||(24721961-24721998)
[»] scaffold0513 (1 HSPs)
scaffold0513 (370-777)||(8201-8602)
[»] scaffold0219 (2 HSPs)
scaffold0219 (402-801)||(19743-20151)
scaffold0219 (807-883)||(19498-19574)
[»] scaffold0057 (1 HSPs)
scaffold0057 (499-880)||(21780-22144)
[»] scaffold0011 (1 HSPs)
scaffold0011 (403-671)||(236006-236272)
[»] scaffold0199 (2 HSPs)
scaffold0199 (462-671)||(12497-12706)
scaffold0199 (394-437)||(12392-12435)
[»] scaffold0169 (2 HSPs)
scaffold0169 (735-883)||(10828-10976)
scaffold0169 (429-608)||(1517-1695)
[»] scaffold0794 (1 HSPs)
scaffold0794 (726-883)||(1315-1472)
[»] scaffold0341 (1 HSPs)
scaffold0341 (382-437)||(17355-17410)
[»] scaffold0184 (1 HSPs)
scaffold0184 (394-437)||(18297-18340)
[»] scaffold0078 (1 HSPs)
scaffold0078 (394-437)||(54504-54547)


Alignment Details
Target: chr1 (Bit Score: 367; Significance: 0; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 44470070 - 44469575
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||| ||||||||||||||||| ||||| ||||| |||||||||  |||||| |||||||||||||||||||| ||||||||||||||    
44470070 aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcagacagtggattctgcataattct 44469971  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| ||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||    
44469970 aaacatttccaagccattttttcggtcagtttttacctgtaattgaaccagagcattttcaaaggcaaaataattcatacaagattgaaactcggacata 44469871  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca 681  Q
    | |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
44469870 atcaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca 44469771  T
682 aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata 781  Q
    |||||||||| |||||||||||||||||||||||||||||      |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
44469770 aagtgtccataattaaacaactcattacacatcattaaat------taaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata 44469677  T
782 atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc 881  Q
    |||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
44469676 atatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatc 44469577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 345 - 883
Target Start/End: Original strand, 50113284 - 50113830
Alignment:
345 taaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgagga 444  Q
    |||||||| ||||||| ||||||  ||||||  |   ||||||||||||| || ||| |||||| |||||| |||||||||||||||||||||  ||| |    
50113284 taaatgacgtttttgctctcttggcagttaattggtgaggaatttgaatttcggctgtagttaattgccgaggaaaatctcggtagttaactgccgagaa 50113383  T
445 agactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaa 544  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| | |||||| |||||||||||||||| ||||| ||||    
50113384 aaactgattatgcagacagtgggttctgcataattctaaacattttcaatccattttttcggctagtttttaactgtaattaaaccagagcatttccaaa 50113483  T
545 ggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaa 644  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
50113484 ggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaa 50113583  T
645 aattacacaaacgtttgaaattcatcaaaacatt--------------acaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaa 730  Q
    ||||||||||||||||||||||||||||||||||              ||||||||||||| ||||||||||||||||||||| |||      |||||||    
50113584 aattacacaaacgtttgaaattcatcaaaacattacaaagtgtccataacaaagtgtccataattaaacaactcattacacattatt------aaattaa 50113677  T
731 atctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatc 830  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
50113678 atccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcgctatc 50113777  T
831 gtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
50113778 gtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 50113830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 319; E-Value: 1e-179
Query Start/End: Original strand, 394 - 883
Target Start/End: Original strand, 9710604 - 9711086
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaa 493  Q
    |||| ||||||||||||||||| |||||  |||| |||||||||  |||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
9710604 tccggctgcagttaactgccgaggaaaacttcgggagttaactgccgaggaaaacgaattatgcagacagtgggttctgcataattctaaacatttccaa 9710703  T
494 gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat 593  Q
    | ||||||| ||| || ||||||||||||||||||| |||  |||| |||||| ||||||||||||||||| ||||||||  ||||||||||||||||||    
9710704 gccattttt-cggtcagtttttacctgtaattaaacaagagtatttccaaaggtaaaataattcatacaacattgaaactaggacataaacaagataaat 9710802  T
594 acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatga 693  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |    
9710803 acaatatcttttacaattgtccataattaaatcaaactgacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaaagtgtccataa 9710902  T
694 ttaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 793  Q
    ||||||||||||||||||||||||      |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
9710903 ttaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaaagaacatacatatataatatattatctt 9710996  T
794 ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
     ||||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
9710997 tcaccatattccgaaacataaatccgacgtcgctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctc 9711086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 29352294 - 29352742
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  |||||| |||||||||||||||||||| |||| |||||||||||||||||||||  |||||||||||||| ||||||| ||||||||||    
29352294 agttaactgccgaggaaaactgattatgcagacagtggattctacataattctaaacatttccaaaccattttttcggccaatttttacttgtaattaaa 29352393  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||  |||||||||||||||||||||||||||||  |||||||||||||    
29352394 ccagagcatttgcaaaggcaaaataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaattaa 29352493  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt 728  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||    
29352494 accgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaatt 29352587  T
729 aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta 828  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||      
29352588 aaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccg 29352687  T
829 tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
29352688 tcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 29352742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 429 - 883
Target Start/End: Complemental strand, 30910041 - 30909593
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  |||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||    
30910041 agttaactgccgaggaaaactgattatgcagacagagggttctgcataattctgaacaattccaagccattttttcggccagtttttacctgtaattaaa 30909942  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||  || |||| ||||||||||||||||||||| ||||||||||||||    
30909941 ccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaacataagtacaatatcttttacaattgttcataattaaattaa 30909842  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt 728  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||      |    
30909841 accgacgtttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaagtactcattacacatcattaaat------t 30909748  T
729 aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta 828  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||      
30909747 aaatccctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccg 30909648  T
829 tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
30909647 tcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctc 30909593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 401 - 882
Target Start/End: Complemental strand, 20353975 - 20353500
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| |||||  ||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
20353975 gcagttaactgccgaggaaaacttcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 20353876  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| || |||||||||||||  ||||||||| |||||||  |||| |||||||||||    
20353875 tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagacaaatacaatat 20353776  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca 700  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||     
20353775 cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaact 20353676  T
701 actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 800  Q
    |||||||| ||||||||||||      |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
20353675 actcattatacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 20353582  T
801 attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct 882  Q
    ||||  ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
20353581 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatct 20353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 441 - 883
Target Start/End: Complemental strand, 13633873 - 13633436
Alignment:
441 aggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccatttt 540  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||| ||||     
13633873 aggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccatttttccggccagtttttacctgtaattaaaccagacaatttc 13633774  T
541 caaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgaca-tttg 639  Q
    ||||||| |||||||||||||||  ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||    
13633773 caaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaatttaaccgacattttg 13633674  T
640 gttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctact 739  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |      |||||||||| |||||    
13633673 gttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcaat------aaattaaatccctact 13633580  T
740 tacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaat 839  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  || ||||||||    
13633579 tacattcaacgcaattacatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcatcgcgaat 13633480  T
840 aagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
13633479 aagcaaaggcatatagcttgccgttttccatgcgtattcatctc 13633436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 3944007 - 3944484
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
3944007 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 3944106  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||  |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
3944107 tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 3944205  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
3944206 atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 3944305  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||      |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
3944306 ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 3944399  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
3944400 atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3944484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 3993883 - 3993406
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
3993883 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 3993784  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||  |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
3993783 tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 3993685  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
3993684 atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 3993585  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||||||      |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
3993584 ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 3993491  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
3993490 atattccgaaacataaatctgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3993406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 38771662 - 38772140
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| ||||| |||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
38771662 gcagttaactgccgaggaaaacctcgggagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 38771761  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
38771762 tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 38771861  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
38771862 atcctttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 38771961  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||      |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
38771962 ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 38772055  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  |||||||||||||||||| |  |||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
38772056 atattccgaaacataaatccgacgtcaccgtcgtcgcggataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 38772140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 483 - 883
Target Start/End: Complemental strand, 37019353 - 37018960
Alignment:
483 aacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataa 582  Q
    ||||| ||||||  |||||||||| ||  |||||| |||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||| || ||||    
37019353 aacatctccaagctattttttcggtcaaattttac-tgtaattaaaccagagtattttcaaaggtaaaataattcatacaacattgaaactcggatataa 37019255  T
583 acaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaa 682  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||    
37019254 acaagataaatacaatatcttttacaattgtccataattaaattaaaccaacatttggttcaaattacacaaacgtttgaaattcatcaaaatgttacaa 37019155  T
683 agtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataa 782  Q
    ||||||||| |||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
37019154 agtgtccataattaaacaactcattacacatcattaaat------taaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataa 37019061  T
783 tatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct 882  Q
    ||||||||||||||||||||||  |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
37019060 tatattatcttccaccatattccgaaacataaatcctatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcgtct 37018961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 8459040 - 8459466
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| ||||||| || ||| ||||||||||||||||||||| | ||||| |||||||||    
8459040 attatgcagacagtgggttctgcataattctaaagcatttctaagccattttt-cgaccagtttttacctgtaattaaaccatagcatttccaaaggcaa 8459138  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| ||||||||| ||||||||  | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
8459139 tataaatcatacaacattgaaacttggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatta 8459238  T
650 cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac 749  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |||      |||||||||| |||||||||||||||    
8459239 cacaaacgtttgaaattcatcaaaacgttaaaaagtgtccataattaaacaactcattacacatgatt------aaattaaatccctacttacattcaac 8459332  T
750 gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc 849  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||| |    
8459333 gcaattacatatagaacgaacatacatgtataatatattatcttctaccatattttgaaacataaatccgacgtcgctatcgtcgcgaataagccaagac 8459432  T
850 atatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||| |||||||||||||||||||||||    
8459433 atatagcttgtcgttttccatgcgtattcatctc 8459466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 427 - 883
Target Start/End: Original strand, 7966042 - 7966497
Alignment:
427 gtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaatt 525  Q
    ||||||||||| |||| || | ||||||||||||||||| |||||||||||||||||| || ||||||| ||||||| |||||| |||||||||||||||    
7966042 gtagttaactgctgagaaa-attgattatgcagacagtgagttctgcataattctaaagcacttccaagccattttt-cggccagtttttacctgtaatt 7966139  T
526 aaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatctttt-acaattgtccataattaaa 624  Q
     ||||||| ||||| ||||||||| |||| | ||||||| || |||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||    
7966140 taaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatctttttacaattgtccataattaaa 7966239  T
625 ttaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacat-cattaaatta 723  Q
    | |||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||  | ||    |||     
7966240 tcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattacatttacacatcatt- 7966338  T
724 aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgt 823  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||    
7966339 aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatgtaatatattatcttccaccatattccgaaacataaatctgacgt 7966438  T
824 cgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
7966439 cgctatcgtcgcgaataag-caaggcatatagcttgccgttttccatgcgtattcatctc 7966497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 429 - 883
Target Start/End: Complemental strand, 51666677 - 51666230
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa 527  Q
    ||||||||| ||||||| ||  |||||||| ||||||||||||||||||||||||| ||||  |||| ||||||| |||||| |||||||||||||||||    
51666677 agttaactgctgaggaaaaca-attatgcacacagtgggttctgcataattctaaagcattctcaagccattttt-cggccaatttttacctgtaattaa 51666580  T
528 accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta 627  Q
    |||| | ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||||||| |||||||||||||||||||||||| |    
51666579 accaaagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatattttacaattgtccataattaaatca 51666480  T
628 aaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaat 727  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||      | ||    
51666479 aaccgacatttggttcaaattacataaaagtttgaaattcatcaaaaagttacaaagtgtccataattaaacaactcattacacatcatt------atat 51666386  T
728 taaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgct 827  Q
    |||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||    
51666385 taaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaattcgacgtcgct 51666286  T
828 atcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||   ||||||||||||||||||||||| ||| ||||||| |||||||||||    
51666285 atcgtctttaataagccaaggcatatagcttgtcgtgttccatgtgtattcatctc 51666230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 399 - 883
Target Start/End: Complemental strand, 1656131 - 1655644
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    ||||||||||||| |||  |||| |||||||||||||||  |||||| ||   |||||||||||||||||||||||||||| | || || || |||| ||    
1656131 ctgcagttaactgtcgagaaaaacctcggtagttaactgccgaggaaaacat-ttatgcagacagtgggttctgcataattgttaagcactttcaagcca 1656033  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    ||||| |||||| ||||||||||||||| || |||| ||||| ||||||||| |||| | ||||||| || ||| | || ||||||||||  ||||||||    
1656032 ttttt-cggccagtttttacctgtaatttaatcagagcatttccaaaggcaatataacttatacaacatttaaatttagtcataaacaagtaaaatacaa 1655934  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| ||| |||||||| ||||||||||||||||| | ||||| ||| ||||||  |||    
1655933 tatcttttacaattgtccataattaaatcaaacggacatttggttcaaaatacacaaaagtttgaaattcatcaaatcgttacatagtatccatgcataa 1655834  T
698 acaactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 793  Q
    ||||| |||||||  |||||| |     | ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
1655833 acaacacattacaactcattacacatcattaaattaaatcattacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 1655734  T
794 ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
1655733 ccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgccgttttccatgcgtattcatctc 1655644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 524 - 883
Target Start/End: Complemental strand, 5082283 - 5081928
Alignment:
524 ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactc--agacataaacaagataaatacaatatcttttacaattgtccataatt 621  Q
    |||||||||| |||||||||||||||||||||||||||||  |||||||||  ||||||||  ||||||| ||||||||||||||||||||| |||||||    
5082283 ttaaaccagagcattttcaaaggcaaaataattcatacaagattgaaactctcagacataataaagataagtacaatatcttttacaattgttcataatt 5082184  T
622 aaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat 721  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
5082183 aaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaagtactccttacacatcattaaat 5082084  T
722 taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgac 821  Q
          ||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
5082083 ------taaatccatatttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgac 5081990  T
822 gtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||  ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
5081989 gtcgccgtcgtcgcgaataagcaaaggcatataccttgtcgttttccatgcgtattcatctc 5081928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 402 - 883
Target Start/End: Complemental strand, 25040115 - 25039645
Alignment:
402 cagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattt 500  Q
    ||||||| || ||| ||||| || |||||||||||||||||||| ||   |||||||||||||||||||||||||||| | || ||||||| |     ||    
25040115 cagttaattgtcgaggaaaaccttggtagttaactgttgaggaaaacat-ttatgcagacagtgggttctgcataattgttaagcatttccca-----tt 25040022  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    ||||||||| ||||||||||||||| ||||||| ||||| ||||| ||| |||| |  |||||| || |||||||| ||||||||||  |||||||||||    
25040021 tttcggccagtttttacctgtaatttaaccagaacatttccaaagacaatataacttgtacaacatttaaactcagtcataaacaagtaaaatacaatat 25039922  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca 700  Q
    ||||||||||||||||||||||||| |||| || |||||||| ||| |||||||| |||| |||||||||||| | ||||| ||||||||||  ||||||    
25039921 cttttacaattgtccataattaaatcaaactgatatttggttcaaaatacacaaaagtttaaaattcatcaaatcgttacatagtgtccatgcataaaca 25039822  T
701 actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 800  Q
    || ||||||||||||||||||||||      || |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
25039821 acacattacacatcattaaattaaa------tccctacttacattcaacgcaattgtatatggaacgaacatacacatataatatattatcttccaccat 25039728  T
801 attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
25039727 attccgaaacataaatccgacgtcgttatcgacgcgaataagccaaggcgtatagcttgccgttttccatgcgtattcatctc 25039645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 19495122 - 19495562
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    ||||||||||||||||||||||||||||| | || ||||||||||  ||||| ||||||| ||||||||||||||||||||||| ||||| |||||| ||    
19495122 attatgcagacagtgggttctgcataattgttaagcatttccaagctatttt-tcggccagtttttacctgtaattaaaccagagcatttccaaaggtaa 19495220  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||||||||||||| || |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||    
19495221 tataattcatacaacatttaaactcagtcataaataagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaata 19495320  T
650 cacaaacgtttgaaattcatcaaa---acattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttac 742  Q
    |||||| |||||||||||||||||      ||||| ||||||||| |||||||||| |||||||  |||||| |     | |||||||||| ||||||||    
19495321 cacaaaagtttgaaattcatcaaacgcgtgttacatagtgtccataattaaacaacacattacaagtcattacacatcattaaattaaatccctacttac 19495420  T
743 attcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataag 842  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||    
19495421 attcaacgcaattgcatatagaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccaacgtcgctatcgtctcgaataag 19495520  T
843 ccaaggcatatagcttgccg-ttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||| |||| ||| ||||||||||||    
19495521 ccaaggcatatagcttgccgttttttcatacgtattcatctc 19495562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 399 - 881
Target Start/End: Original strand, 36072400 - 36072879
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    ||||||||||||||||| ||||| |||||||||||||||  ||  || |||||||||||||||||||| ||||||||||||||||| ||||| ||| |||    
36072400 ctgcagttaactgccgaggaaaacctcggtagttaactgccgaaaaa-actgattatgcagacagtggattctgcataattctaaagcattttcaaatca 36072498  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    ||||| ||    |||||||||||||      ||||| ||||| ||||||||| |||| | |||||||  | |||||||| ||||||||||  ||||||||    
36072499 ttttt-cgaaatttttttacctgta------ccagaacatttccaaaggcaatataacttatacaacagttaaactcagtcataaacaagtaaaatacaa 36072591  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||||||| | |||||||||||||||    
36072592 tatcttttacaattgttcataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacattagatagtgtccatgattaa 36072691  T
698 acaactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 793  Q
    |||||  ||||||  |||||| |     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
36072692 acaacatattacaactcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 36072791  T
794 ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc 881  Q
    |||||||||||  |||||||||||||||||||||||| ||   ||| |||||||||||||||||||  ||||||||||||||||||||    
36072792 ccaccatattccgaaacataaatccgacgtcgctatcatcttcaattagccaaggcatatagcttgttgttttccatgcgtattcatc 36072879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 12643291 - 12643714
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    ||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||||||                         
12643291 agttaactgctgaggaaaactgattatgcagacagtttgttctgcataattctaaacattttcaagccattttttcggc--------------------- 12643369  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
     |||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
12643370 -cagagcatttccaaaggcaaaataattcatacaagattgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 12643468  T
629 accgacatttggttaaaattacacaaacgtttgaaattca---tcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaa 725  Q
    ||||||||||||||||||||| ||||||||||  |||| |   || | | ||||   ||||||||| |||||||||||||||||||||||||||||||||    
12643469 accgacatttggttaaaattaaacaaacgttt--aattaagtgtctata-atta---agtgtccataattaaacaactcattacacatcattaaattaaa 12643562  T
726 attaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcg 825  Q
          || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
12643563 ------tccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattctgaaacataaatccgacgtcg 12643656  T
826 ctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
12643657 ccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 12643714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 401 - 725
Target Start/End: Complemental strand, 15051388 - 15051064
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  |  |||  |||||||||||||||||| |||||||||||||||||||||||||||| |||||    
15051388 gcagttaactgccgaggaaaacctcggtagttaactgccggcgaaatctgattatgcagacagtgagttctgcataattctaaacatttccaagccattt 15051289  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||  ||||||| ||||||||    
15051288 tttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatat 15051189  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca 700  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||     
15051188 cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaact 15051089  T
701 actcattacacatcattaaattaaa 725  Q
    |||||||||||||||||||||||||    
15051088 actcattacacatcattaaattaaa 15051064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 399 - 883
Target Start/End: Complemental strand, 13178174 - 13177690
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    |||||||||||||| || ||||| ||||  |||||||||  ||| || ||   ||||||| |||||||||||||||||||| |||| || ||||||| ||    
13178174 ctgcagttaactgctgaggaaaacctcgagagttaactgccgagaaaaacat-ttatgca-acagtgggttctgcataattataaagcacttccaagcca 13178077  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    |||||| | ||| ||||||||||||||| ||||||| ||||| ||||||||| |||| | |||  |  || |||||||| ||||||||||  ||||| ||    
13178076 tttttt-gaccagtttttacctgtaatttaaccagagcatttccaaaggcaatataacttatatta--tttaaactcagtcataaacaagtaaaatataa 13177980  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||||||||  ||||    
13177979 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacatagtgtccatagttaa 13177880  T
698 acaactcattacacatcattaaa--tta--aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 793  Q
    ||||| |||||||  |||||| |  |||  |||||||||| |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
13177879 acaacacattacaactcattacacattattaaattaaatccctacttactttcaatgcaattgcatatggaatgaacatacatatataatatattatctt 13177780  T
794 ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||  |||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||    
13177779 ccaccatattccgaaacataaatccgacgtcgctatcgttgcgattaagccaagccatatagcttgccgttttccatgcgtattcatctc 13177690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 528 - 883
Target Start/End: Original strand, 6558047 - 6558410
Alignment:
528 accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta 627  Q
    |||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||  ||||||| ||||||||||||||||||||| |||||||||||||    
6558047 accagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaatta 6558146  T
628 aaccgacatttggttaaaattacacaaacgtttgaaattcatcaaa--------------acattacaaagtgtccatgattaaacaactcattacacat 713  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||              |||||||||||||||||| ||||||| |||||||||||||    
6558147 aaccgacatttggttaaaattaaacaaatgtttgaaattcatcaaattaaaccactcaaaacattacaaagtgtccataattaaactactcattacacat 6558246  T
714 cattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacata 813  Q
    ||||||||||||      || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
6558247 cattaaattaaa------tccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacata 6558340  T
814 aatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
6558341 aatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 6558410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 394 - 691
Target Start/End: Complemental strand, 46886434 - 46886138
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaa 493  Q
    |||| ||| |||||| |||||| ||||| |||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
46886434 tccggctgtagttaagtgccgaggaaaa-ctcggtagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctaaacatttccaa 46886336  T
494 gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat 593  Q
    | |||||||||||| | ||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
46886335 gccattttttcggctagtttttacctgtaattaaaccagagcctttccaaaggcaaaataattcatacaacattgaaactcggacataaacaagataaat 46886236  T
594 acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccat 691  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
46886235 acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcgaaacattacaaagtgtccat 46886138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 38689962 - 38690417
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    ||||||||||||||| | ||||| |||||||||||||||  |||||| ||  |||||||||||||||| |||| |||||||||||| |||||||||| ||    
38689962 ctgcagttaactgccaaggaaaacctcggtagttaactgccgaggaaaaca-attatgcagacagtggtttctacataattctaaagcatttccaagcca 38690060  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    ||||| |||||| |||||| ||||||||||||||||  |||| ||||||||| ||                     ||| |||||| |||| ||||||||    
38690061 ttttt-cggccagtttttatctgtaattaaaccagaggatttccaaaggcaatat---------------------cagtcataaataagaaaaatacaa 38690138  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    ||||||||||||||||||||| |||||| ||||||||||||| || |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
38690139 tatcttttacaattgtccatagttaaatcaaaccgacatttgattcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaa 38690238  T
698 acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 797  Q
    ||||| ||||||||||||||| ||||||      || ||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||||    
38690239 acaacacattacacatcattatattaaa------tc-ctacttacattcatcacaattgcatatggaacaaacatacatatataatatattattttccac 38690331  T
798 catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||| | |||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
38690332 catattttgaaacataaatccgacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 38690417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 451 - 882
Target Start/End: Complemental strand, 4518406 - 4517959
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||| ||||||| ||||||||||||||||||| ||||| |||| ||||||| |||||| ||||||||||||||||||||| | ||||| |||||||||    
4518406 attatggagacagtaggttctgcataattctaaagcattttcaagccattttt-cggccagtttttacctgtaattaaaccaaagcatttccaaaggcaa 4518308  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
4518307 tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatta 4518208  T
650 cacaaacgtttgaaattcatcaaaacattaca--------------aagtgtccatgattaaacaactcattacacatcatt--aaattaaaattaaatc 733  Q
    |||||| ||||||||||||||| ||| |||||              |||||||||| |||||||||| |||||||  |||||  | || |  ||  ||||    
4518207 cacaaaagtttgaaattcatcagaacgttacaaaatgtccataattaagtgtccataattaaacaacacattacaactcattacacatcattatataatc 4518108  T
734 tctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtc 833  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||||| ||||| |||    
4518107 cctacttacattcatcacaattgcatatggaacgaacatacatatataatatattatttttcaccatattccgaaacataaatccgacgttgctatagtc 4518008  T
834 gcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct 882  Q
       ||||||||||||||||||||||||| ||||||||||||||||||||    
4518007 tttaataagccaaggcatatagcttgccattttccatgcgtattcatct 4517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 451 - 882
Target Start/End: Complemental strand, 5141851 - 5141435
Alignment:
451 attatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    |||||||||||||||||||||||||||||| |       || || ||||||| ||| || |||||||||||||||||| |||| ||||| |||||||||     
5141851 attatgcagacagtgggttctgcataattcaa-------cctagccattttt-cggtcagtttttacctgtaattaaagcagaacatttccaaaggcaat 5141760  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||| ||||||||| || | |||||| ||||||||||| || |||| ||||||||||| |||||||||||||||| |||||||||   ||||  ||||||    
5141759 ataactcatacaacatttatactcaggcataaacaagaaaattaca-tatcttttacagttgtccataattaaatcaaaccgacaaggggttcgaattac 5141661  T
651 acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacg 750  Q
     | || ||||||||||||| ||||| ||| | |||||| || |||||||||| ||||| | ||| ||||||||||      |||||||| |||||| |||    
5141660 tcgaatgtttgaaattcattaaaacgttaaatagtgtcaataattaaacaacacattatatatcgttaaattaaa------tctctactgacattctacg 5141567  T
751 caattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggca 850  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||| |||||||||||||||||||||||||||| |||    
5141566 caattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaacatacatctgacgtcgctatcgtcgcgaataagccaacgca 5141467  T
851 tatagcttgccgttttccatgcgtattcatct 882  Q
    ||||||||||||||||||||||||||||||||    
5141466 tatagcttgccgttttccatgcgtattcatct 5141435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 464 - 883
Target Start/End: Complemental strand, 46979235 - 46978798
Alignment:
464 tgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcataca 562  Q
    ||||||||||||||||||||| ||||| ||||  |||||| ||| || ||||||| |||||||||| |||| ||||| ||||||||| |||| |||||||    
46979235 tgggttctgcataattctaaaacattttcaagctattttt-cggtcagtttttacttgtaattaaatcagagcatttccaaaggcaatataaatcataca 46979137  T
563 acgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttga 662  Q
    || ||||||||| | ||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||| ||||||    
46979136 acattgaaactcggtcataaacaagaaaaatagaatatcttttacaattgtccataattaaatcaaacagacatttgattcaaattacacaaaagtttga 46979037  T
663 aattcatcaaaacattacaaagtgt--------------ccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacat 744  Q
    |||||||||||||||||||||||||              |||| |||||||||| |||||||  |||||| |     | | |||||||| ||||||||||    
46979036 aattcatcaaaacattacaaagtgtccataattaagtgtccataattaaacaacacattacaattcattacacatcattatattaaatccctacttacat 46978937  T
745 tcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcc 844  Q
    ||| | |||||||||  ||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||   ||||||||    
46978936 tcatcacaattgcattaggaacgaacatacatatataatatattattttccaccatatttcgaaacataaatccgacgtcgctatcgtctttaataagcc 46978837  T
845 aaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||| ||||||||||| |||||||||||    
46978836 aaggcatatagcttgtcgttttccatgtgtattcatctc 46978798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 118 - 315
Target Start/End: Original strand, 50113033 - 50113229
Alignment:
118 actttagagtaaagcaatgtgggagggttatgctttataacttacttttgttgttgtttgtgagtcataggatccattaccttacgcgtgactttggact 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
50113033 actttagagtaaagcaatgtgggagggttatgctttataacttacttttgttgttgtttgtgagtcataggatccattaccttacgcgtgactttgg-ct 50113131  T
218 taggaggaggatcacgctagtctgttattgtgggccataccatccctgtggtgtgtgtggacccaccttgcatttcactcatttttcttatggttgtt 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
50113132 taggaggaggatcacgctagtctgttattgtgggccataccatccctgtggtgtgtgtggacccaccttgcatttcactcatttttgttatggttgtt 50113229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 571 - 883
Target Start/End: Original strand, 33168106 - 33168422
Alignment:
571 actcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatc 670  Q
    |||||| ||||||||||  ||||| | ||||||||||| |||||||||||||||| |||||||||||| ||| ||| ||||| || |||||||| |||||    
33168106 actcagtcataaacaaggaaaatatattatcttttacagttgtccataattaaatcaaaccgacatttagttcaaagtacacgaaagtttgaaaatcatc 33168205  T
671 aaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaac 766  Q
    ||||| ||||| ||||||||| |||||||||| |||||||  |||||| ||    | |||||||||| ||||||||| ||||||||||| ||||||||||    
33168206 aaaacgttacatagtgtccataattaaacaacacattacaactcattacatatcattaaattaaatccctacttacactcaacgcaattacatatggaac 33168305  T
767 gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt 866  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||   |||||| ||||||||||||||||  |||||    
33168306 gaacatacatatataatatattattttccaccatattccgaaacataaatctgacgtcgctatcgtctaaaataagtcaaggcatatagcttgttgtttt 33168405  T
867 ccatgcgtattcatctc 883  Q
    |||||||||||||||||    
33168406 ccatgcgtattcatctc 33168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 451 - 671
Target Start/End: Complemental strand, 52805549 - 52805330
Alignment:
451 attatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||||| ||| ||  ||||||||||||||||||||||  |||| ||||||||||    
52805549 attatgcagacagtgggctctgcatgattctaaacatttccaagccattttt-cggtcagcttttacctgtaattaaaccagagtatttccaaaggcaaa 52805451  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||||||||| ||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
52805450 ataattcatataacattgaaactctgacataaataagaaaaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattac 52805351  T
651 acaaacgtttgaaattcatca 671  Q
    |||||||||||||||||||||    
52805350 acaaacgtttgaaattcatca 52805330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 403 - 671
Target Start/End: Complemental strand, 471108 - 470840
Alignment:
403 agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatttt 501  Q
    |||||||||||||  ||||  ||||||  ||||||  ||||||  |||||||||||| ||||| | ||||||| |||||||| |||||||| ||| ||||    
471108 agttaactgccgagaaaaacttcggtatgtaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaggtc-tttt 471010  T
502 ttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatc 601  Q
    |||||||| ||||||||||||||||||||||| |||||  |||||||||| |||||||||||| ||||||||| |||||||||||||||| |||||||||    
471009 ttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataagtacaatatc 470910  T
602 ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||| ||||| ||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||    
470909 ttttaccattgttcataatttaatcaaaccgacatttggttcaaattatacaaacgtttgaaattcatca 470840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 448 - 671
Target Start/End: Original strand, 94477 - 94700
Alignment:
448 ctgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaagg 546  Q
    |||||||||||| || || | ||||||| |||||||| |||||||||| | |||||| | ||| |||||||||||||||||| |||| |||||  |||||    
94477 ctgattatgcaggcattgagctctgcatcattctaaaacatttccaaggcttttttt-gaccagtttttacctgtaattaaagcagagcatttcgaaagg 94575  T
547 caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa 646  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
94576 caaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaa 94675  T
647 ttacacaaacgtttgaaattcatca 671  Q
    |||||||||||||||||||||||||    
94676 ttacacaaacgtttgaaattcatca 94700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 455 - 671
Target Start/End: Original strand, 31780054 - 31780270
Alignment:
455 tgcagacagtgggttctgcataattctaaac-atttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaata 553  Q
    ||||| ||||| | ||||||| ||||||||  ||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||  || ||||||| |    
31780054 tgcaggcagtgagctctgcatcattctaaaatatttccaag-cattttttcggccaatttttacctgtaattaagccagagcatttcgaatggcaaaaca 31780152  T
554 attcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacaca 653  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
31780153 attcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacattaggttcaaattacaca 31780252  T
654 aacgtttgaaattcatca 671  Q
    ||||||||||||||||||    
31780253 aacgtttgaaattcatca 31780270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 482 - 671
Target Start/End: Complemental strand, 22527653 - 22527465
Alignment:
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| | |||||||||| | ||||||||||||||||||||||| |||||  |||||||||| |||||||||||| ||||||||| ||||||    
22527653 aaacatttccaagcc-ttttttcggctagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacata 22527555  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||    
22527554 aacaagataaatacaatatgttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca 22527465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 451 - 672
Target Start/End: Complemental strand, 22346034 - 22345818
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||||| || ||| ||||||||||||||||| ||||| ||||| |||||||||    
22346034 attatgcagacagtgggttctgcataattctaatgcatttccaagccattttt-cgaccagtttttacctgtaattaagccagagcatttccaaaggcaa 22345936  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| ||||||||| ||||||||| |||     ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
22345935 tataaatcatacaacattgaaactcggac-----caagaaaaatacaatatcttttacaattgtccataagtaaatcaaaccgacatttggttcaaatta 22345841  T
650 cacaaacgtttgaaattcatcaa 672  Q
    |||||||||||||||||||||||    
22345840 cacaaacgtttgaaattcatcaa 22345818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 382 - 573
Target Start/End: Complemental strand, 23359408 - 23359217
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||| |||||||||||| |||| ||||| ||||||||| |||||  |||||| ||||||||| |||||||   |||||||||||||||    
23359408 aggaatttgaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgaggaaaactgattatacagacagcaagttctgcataattct 23359309  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaact 573  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||    
23359308 aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaact 23359217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 482 - 672
Target Start/End: Original strand, 19521711 - 19521900
Alignment:
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| |||||||| || || |||||||||| ||||||| |||| |||||  ||||||||||||||||||||| | ||||||||| ||||||    
19521711 aaacatttccaagccatttttt-ggtcactttttacctgcaattaaagcagagcatttcgaaaggcaaaataattcatacagcattgaaactcggacata 19521809  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaa 672  Q
    ||||||| |||||| |||||||||||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||    
19521810 aacaagaaaaatactatatcttttacaattgtctataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattcatcaa 19521900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 451 - 667
Target Start/End: Complemental strand, 21144621 - 21144405
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||| |||||||| | |||| || |||||||| |||||||||| ||||||| |||||| |||||| |||||| |||| ||||  ||||  ||||||||    
21144621 attatgaagacagtgagctctgtatgattctaaaacatttccaagccattttt-cggccagtttttatctgtaagtaaagcagagaatttcgaaaggcaa 21144523  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||    
21144522 aataattcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaattgtctataattaaatcaaatcgacatttggttcaaatta 21144423  T
650 cacaaacgtttgaaattc 667  Q
    ||||||||||||||||||    
21144422 cacaaacgtttgaaattc 21144405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 16281828 - 16281999
Alignment:
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat 598  Q
    |||||||| || ||||||| |||||||||| |||| |||||  ||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||    
16281828 tttttcggtcagtttttac-tgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattaaaactcggacataaacaagaaaaatacaat 16281926  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
16281927 attttttacaattgtccataattaaattaaaccgacatctggttcaaattacacaaacgtttgaaattcatca 16281999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 50617333 - 50617503
Alignment:
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat-acaa 597  Q
    ||||||||||| |||||||||||||||||| || | |||||| ||||||||||||||||||||||| ||||||||| ||||||||||| | |||  ||||    
50617333 tttttcggccagtttttacctgtaattaaagcacaacattttgaaaggcaaaataattcatacaacattgaaactctgacataaacaaaaaaaaacacaa 50617432  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca 668  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
50617433 tattttttacaattgtccatatttaaattaaaccgacatttggttcaaattacacaaacgtttgaaattca 50617503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 382 - 500
Target Start/End: Original strand, 6557929 - 6558046
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| | || ||||||||||||||||| |||||||||||||||||||||  ||| || |||||||||||||||| |||| |||||||||||||    
6557929 aggaatttgaaattcggctgcagttaactgccgaggaaaatctcggtagttaactgccgagaaaaactgattatgcagacaatggg-tctgcataattct 6558027  T
482 aaacatttccaagtcattt 500  Q
    |||||||| |||| |||||    
6558028 aaacattttcaagccattt 6558046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 633 - 773
Target Start/End: Original strand, 1179878 - 1180022
Alignment:
633 acatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaatt 728  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||| | ||||||||  |||||||||| |||||||   ||||||||    | |||||    
1179878 acatttcgttaaaattacacgaatgtttgaaattcatcaaaacattaaagagtgtccacaattaaacaacacattacaacacattaaatattgttaaatt 1179977  T
729 aaatctctacttacattcaacgcaattgcatatggaacgaacata 773  Q
    |||| | | || |||||| ||||| ||||| || |||||||||||    
1179978 aaatatttgctgacattctacgcagttgcagatagaacgaacata 1180022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 399 - 484
Target Start/End: Original strand, 29261445 - 29261529
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa 484  Q
    ||||| ||||||||||||||||| ||| |||||||||||| || ||| ||| |||||| |||||| ||||||||||||||||||||    
29261445 ctgcaattaactgccgaagaaaacctcagtagttaactgtcga-gaaaactaattatggagacagcgggttctgcataattctaaa 29261529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 354 - 437
Target Start/End: Original strand, 52802116 - 52802199
Alignment:
354 tttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||| |  ||||||| | | ||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||    
52802116 tttttgccctctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactg 52802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 499 - 651
Target Start/End: Complemental strand, 47715029 - 47714877
Alignment:
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| | ||||||||| ||||| ||||||| ||||| || |  ||| || | || |||||| || | |||||| ||||||||| | ||||||| |    
47715029 tttttcggctagtttttacctataattcaaccagagcatttccagaaacaatattagtcgtacaacatttatactcagtcataaacaacaaaaatacatt 47714930  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattaca 651  Q
    |||||||| |  ||||||||||| ||| || |||||||||  |||||||||||    
47714929 atcttttatagctgtccataattgaatcaatccgacatttcattaaaattaca 47714877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 6562220 - 6562165
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||| |||| ||||||||||||||||| ||||  |||||||||||||||    
6562220 aggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactg 6562165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 395 - 438
Target Start/End: Complemental strand, 41804079 - 41804036
Alignment:
395 ccgactgcagttaactgccgaagaaaatctcggtagttaactgt 438  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||    
41804079 ccgactgcagttaactgccgaggaaaacctcggtagttaactgt 41804036  T

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Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 437
Target Start/End: Original strand, 44336251 - 44336318
Alignment:
370 agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||| ||| ||||||| ||| | || ||||||||||||||||| ||||| |||||||||||||||    
44336251 agttaactgtcgaggaattagaaattcggctgcagttaactgccgaggaaaacctcggtagttaactg 44336318  T

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Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 11183212 - 11183261
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgagg 443  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||| ||||    
11183212 tccggctgcagttaactgccgaggaaaacctcggtagttaactgtcgagg 11183261  T

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Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 8460155 - 8460101
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||| || | ||||||||||||||| | |||||||||||||||||||||    
8460155 aggaatttgaaatcgg-ctgcagttaactgccaaggaaaatctcggtagttaactg 8460101  T

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Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 13636169 - 13636126
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
13636169 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 13636126  T

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Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 15047296 - 15047351
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||| |||| ||||||||||||||||| |||   |||||||||||||||    
15047296 aggaatttgaaatccggctgcagttaactgccgaggaattcctcggtagttaactg 15047351  T

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Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 30910074 - 30910023
Alignment:
370 agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaa 421  Q
    ||||||| ||| ||||||||||| |||| ||||||||||||||||| |||||    
30910074 agttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaa 30910023  T

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Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 16270067 - 16270029
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||||||||| ||||| |||||||||    
16270067 ctgcagttaactgccgaagaaaacctcggcagttaactg 16270029  T

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Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 381 - 459
Target Start/End: Original strand, 19521622 - 19521700
Alignment:
381 aaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcag 459  Q
    |||||||| ||| |||| ||||||||| ||||| | || ||||||||||||||||||  |||||| ||  |||||||||    
19521622 aaggaattagaaatccggctgcagttacctgccaaggataatctcggtagttaactgccgaggaaaacaaattatgcag 19521700  T

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Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 579 - 677
Target Start/End: Complemental strand, 25234106 - 25234008
Alignment:
579 ataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacat 677  Q
    ||||||||||  ||||||  |||||| |||||||  || |||||||||||  | |||||| |||||||| |||| || |||||||||||| | ||||||    
25234106 ataaacaagaacaatacataatctttcacaattgatcaaaattaaattaattcaacatttcgttaaaataacacgaatgtttgaaattcaactaaacat 25234008  T

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Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 605
Target Start/End: Original strand, 29261531 - 29261601
Alignment:
535 cattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatctttt 605  Q
    |||||||||||| || |||| | ||||||| || ||| |||| ||||||||||  ||||||||||||||||    
29261531 cattttcaaaggtaatataacttatacaacatttaaattcagtcataaacaagtaaaatacaatatctttt 29261601  T

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Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 253409 - 253356
Alignment:
310 gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccc 362  Q
    |||||||||||||||| |||| ||  ||||||| ||||||||||||||||||||    
253409 gttgttcccacattacgtaaggctgtgccacacgagtaaatgacatttttgccc 253356  T

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Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 20114546 - 20114599
Alignment:
310 gttgttcccacattacataa-gctcggccacaccagtaaatgacatttttgccc 362  Q
    |||||||||||||||||||| |||  ||||||| |||||||||| |||||||||    
20114546 gttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgccc 20114599  T

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Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 26633559 - 26633596
Alignment:
400 tgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||||||| ||||| |||||||||||||||    
26633559 tgcagttaactgccgaggaaaacctcggtagttaactg 26633596  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 26944420 - 26944473
Alignment:
310 gttgttcccacattacataa-gctcggccacaccagtaaatgacatttttgccc 362  Q
    |||||||||||||||||||| |||  ||||||| |||||||||| |||||||||    
26944420 gttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgccc 26944473  T

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Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 32161424 - 32161371
Alignment:
310 gttgttcccacattacataa-gctcggccacaccagtaaatgacatttttgccc 362  Q
    |||||||||||||||||||| |||  ||||||| |||||||||| |||||||||    
32161424 gttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgccc 32161371  T

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Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 422
Target Start/End: Original strand, 41453839 - 41453892
Alignment:
369 tagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaat 422  Q
    |||||||| | | ||||||||||| |||| ||||||||||||||||| ||||||    
41453839 tagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaat 41453892  T

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Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 44596802 - 44596855
Alignment:
310 gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccc 362  Q
    ||||||||||||||||||||| ||  ||||||| |||||||||| |||||||||    
44596802 gttgttcccacattacataagactgtgccacacgagtaaatgacgtttttgccc 44596855  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 50117886 - 50117853
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaa 434  Q
    ||||||||||||||| ||||||||||||||||||    
50117886 gcagttaactgccgaggaaaatctcggtagttaa 50117853  T

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Target: scaffold0116 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 16014 - 15519
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||  ||||||||||||||||| ||||| ||||||||||||||   |||||| ||||||||||||||||||| |||||||||||||||    
16014 aggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaacttccgaggaaaactgattatgcagacagtgagttctgcataattct 15915  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||| ||| ||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||    
15914 aaacatttctaagccatttgttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata 15815  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca 681  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
15814 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttagttaaaattaaacaaacgtttgaaattcatcaaaacattaca 15715  T
682 aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata 781  Q
    |||||||||| |||||||||||||||||||||||||||||      |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
15714 aagtgtccataattaaacaactcattacacatcattaaat------taaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata 15621  T
782 atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc 881  Q
    ||||||||| |||||||||||||  ||||||||||| |||||| |  ||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
15620 atatattattttccaccatattccgaaacataaatctgacgtccccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatacgtattcatc 15521  T

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Target: chr7 (Bit Score: 348; Significance: 0; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 429 - 883
Target Start/End: Complemental strand, 47743001 - 47742553
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
47743001 agttaactgtcgaggaaaactgattatgcagacagtgggttctgcataattctaaacatttccaagccatttttttggccagtttttacctgtaattaaa 47742902  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| |||||||||||||||||||||||||||||| |||||||   |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
47742901 ccagagcattttcaaaggcaaaataattcatacaacattgaaacatggacaaaaacaagataaatgcaatatcttttacaattgtccataattaaattaa 47742802  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt 728  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||      |    
47742801 accaacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcattaaat------t 47742708  T
729 aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta 828  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |    
47742707 aaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgcca 47742608  T
829 tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
47742607 tcgtcgcgaataagccaaggcatatagcttgtcgttttccatgcgtattcatctc 47742553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 424 - 883
Target Start/End: Complemental strand, 15070368 - 15069914
Alignment:
424 tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa 523  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||    
15070368 tcggcagttaactgcngaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttttcggccagtttttacctgtaa 15070269  T
524 ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa 623  Q
     ||||||||| ||||| ||||||| |||||||||||||||  ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||    
15070268 ataaaccagagcatttccaaaggctaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaa 15070169  T
624 attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt 722  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||         
15070168 attaaaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt----- 15070074  T
723 aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg 822  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
15070073 -aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 15069975  T
823 tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
15069974 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 15069914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 603812 - 604288
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| || |||||| |||||   |||||  ||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
603812 gcagttaactgccgaggaaaaccttggtagtaaactgccaaggaaatctgattatgcagacagtgggttctgcataattctaagtatttccaagccattt 603911  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||  |||||||||  ||||||  ||||||||||||||||    
603912 tttcggccagtttttacctgtaattaaaccagaacatttccaaaggtaaaataattcatacaagattgaaactcgaacataatgaagataaatacaatat 604011  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca 700  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||     
604012 cttttacaattgttcataattaaattaaatcgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaact 604111  T
701 actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 800  Q
    |||||||||||||||||      |||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
604112 actcattacacatcatt------aaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatattatcttccaccat 604205  T
801 attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
604206 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 604288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 319; E-Value: 1e-179
Query Start/End: Original strand, 447 - 883
Target Start/End: Complemental strand, 18109788 - 18109357
Alignment:
447 actgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaagg 546  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| |||||||||||||||| ||||| ||||||    
18109788 actgataatgcagacagtgggttctgcataattctaaacatttccaaaccattttttcggccagtttttatctgtaattaaaccagagcatttccaaagg 18109689  T
547 caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgaca-tttggttaaa 645  Q
    |||||||||||||||||  ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
18109688 caaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaaaccgacattttggttaaa 18109589  T
646 attacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacatt 745  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||||||| |||||||||||    
18109588 attaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacatt 18109495  T
746 caacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcca 845  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||| |    
18109494 caacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaa 18109395  T
846 aggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||||||||||||||||||||||    
18109394 aggcatatagcttgccgttttccatgcgtattcatctc 18109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 395 - 878
Target Start/End: Original strand, 34622526 - 34623002
Alignment:
395 ccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaa 493  Q
    ||||||||||||||||| ||| ||||  ||||||||||||| |   ||||| ||  |||||||||||||||||||||||||||||||||| |||||||||    
34622526 ccgactgcagttaactgtcgaggaaatcctcggtagttaacagccaaggaaaaca-attatgcagacagtgggttctgcataattctaaagcatttccaa 34622624  T
494 gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat 593  Q
    | ||||||| ||| || ||||||| ||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | |||||| |||| ||||    
34622625 gccattttt-cggtcagtttttacatgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaataagaaaaat 34622723  T
594 acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatga 693  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |    
34622724 acaatatattttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataa 34622823  T
694 ttaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 793  Q
    |||||||||||||||||||||||||||||||| |      ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
34622824 ttaaacaactcattacacatcattaaattaaact------tctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatctt 34622917  T
794 ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc 878  Q
    ||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
34622918 ccatcatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc 34623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 424 - 883
Target Start/End: Complemental strand, 42503856 - 42503402
Alignment:
424 tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa 523  Q
    |||| |||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||| |||||||||||||    
42503856 tcggcagttaactgtcgaggaaaactgattatgcagacagtgagttctgcataattctagacatttccaagctattttttcggccagtttttacctgtaa 42503757  T
524 ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa 623  Q
    |||||||||| ||| | ||||||| ||||||||||| |||  ||||||||| | ||||| ||||||||||||||||||||||| |||||| ||| |||||    
42503756 ttaaaccagagcatctccaaaggctaaataattcatgcaagattgaaactcggtcataatcaagataaatacaatatcttttataattgttcatgattaa 42503657  T
624 attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt 722  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||         
42503656 attaaaccaacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt----- 42503562  T
723 aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg 822  Q
     |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
42503561 -aaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 42503463  T
823 tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
42503462 tcgccgtcgtcgcgaataagcaaaggcatgtagcttgccgttttccatgcgtattcatctc 42503402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 30791048 - 30790570
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    |||||||||| |||| ||||| |||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
30791048 gcagttaactaccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 30790949  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| || ||||||||||   |   ||||||||| |||||||  |||||||||| |||    
30790948 tttcggccattttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatagaat 30790849  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
30790848 atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 30790749  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||||||      |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
30790748 ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 30790655  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
30790654 atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctc 30790570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 45767901 - 45767424
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
45767901 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 45767802  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||  |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
45767801 tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 45767703  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
45767702 atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 45767603  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||||||||||      || |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
45767602 ctactcattacacatcattaaattaaa------tccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 45767509  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
45767508 atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 45767424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 449 - 883
Target Start/End: Original strand, 43619760 - 43620189
Alignment:
449 tgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggca 548  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||  |||||| |    
43619760 tgattatgcagacagcaggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcattc-caaaggta 43619858  T
549 aaataattcatac--aacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa 646  Q
    | ||||||||||   |   |||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
43619859 atataattcatatgtatgattgaaactcagacataatgaagataaatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaa 43619958  T
647 ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc 746  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||||||| ||||||||||||    
43619959 ttaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattc 43620052  T
747 aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa 846  Q
    || |||||| |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||  ||||||||||||||| ||    
43620053 aatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa 43620152  T
847 ggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||||||||||    
43620153 ggcatatagcttgccgttttccatgcgtattcatctc 43620189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 19044308 - 19044815
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    |||||||||||  |||||||||||||| |||||| |||||  ||||||||||||||  |||||| ||  |||||||||| |||||||| |||||||||||    
19044308 aggaatttgaaa-ccgactgcagttaattgccgaggaaaacttcggtagttaactgccgaggaaaaca-attatgcagatagtgggttttgcataattct 19044405  T
482 aaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat 580  Q
    ||  |||||||||| ||||||| |||| | |||||||||||||||||||||||  |||| ||||||||| |||| ||||||||| |||||| |  | |||    
19044406 aatgcatttccaagccattttt-cggctagtttttacctgtaattaaaccagagaatttccaaaggcaatataaatcatacaacattgaaattgggtcat 19044504  T
581 aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattac 680  Q
    || ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
19044505 aaccaagaaaaatacaatatcttttacagttgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacattac 19044604  T
681 a--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaac 766  Q
    |              |||||||||| ||||||||| |||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||    
19044605 aaagtgtccataattaagtgtccataattaaacaaatcattacacatcatt------aaattaaatctctacttacattcaacgcaattgcatatggaac 19044698  T
767 gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt 866  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
19044699 gaacatacatatataatatattatcttccaccatatttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttgccgtttt 19044798  T
867 ccatgcgtattcatctc 883  Q
    |||||| ||||| ||||    
19044799 ccatgcatattcttctc 19044815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 20710328 - 20709821
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    |||||||||||  |||||||||||||| |||||| |||||  ||||||||||||||  |||||| ||  |||||||||| |||||||| |||||||||||    
20710328 aggaatttgaaa-ccgactgcagttaattgccgaggaaaacttcggtagttaactgccgaggaaaaca-attatgcagatagtgggttttgcataattct 20710231  T
482 aaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat 580  Q
    ||  |||||||||| ||||||| |||| | |||||||||||||||||||||||  |||| ||||||||| |||| ||||||||| |||||| |  | |||    
20710230 aatgcatttccaagccattttt-cggctagtttttacctgtaattaaaccagagaatttccaaaggcaatataaatcatacaacattgaaattgggtcat 20710132  T
581 aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattac 680  Q
    || ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
20710131 aaccaagaaaaatacaatatcttttacagttgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacattac 20710032  T
681 aaagtgt--------------ccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaac 766  Q
    |||||||              |||| ||||||||| |||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||    
20710031 aaagtgtccataattaagtgtccataattaaacaaatcattacacatcatt------aaattaaatctctacttacattcaacgcaattgcatatggaac 20709938  T
767 gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt 866  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
20709937 gaacatacatatataatatattatcttccaccatatttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttgccgtttt 20709838  T
867 ccatgcgtattcatctc 883  Q
    |||||| ||||| ||||    
20709837 ccatgcatattcttctc 20709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 399 - 882
Target Start/End: Original strand, 10705279 - 10705765
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    |||||||||||||||||  |||| || || |||||||||  ||| || |||||||||||||||||||||||||||||||||||||| || ||||||||||    
10705279 ctgcagttaactgccgagaaaaaccttgggagttaactgccgagaaa-actgattatgcagacagtgggttctgcataattctaaagcacttccaagtca 10705377  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    ||||| ||| || ||||||| ||||||| ||||| | |||||  |||||||| |||| | ||||||| || |||||||| ||||||||||  ||||||||    
10705378 ttttt-cggtcaatttttacatgtaatttaaccaaagcatttctaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaa 10705476  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||| |||| |||||||||||||  ||||| ||||||||| |||||    
10705477 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttaaaattcatcaaaatgttacatagtgtccataattaa 10705576  T
698 acaactcattacacatcatt--aaatta--aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 793  Q
    ||||  |||||||  |||||  | || |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
10705577 acaatacattacaactcattacacatcaataaattaaatctctacttacattcaacgcaattgcatatagaacgaacatacatatataatatatcatctt 10705676  T
794 ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct 882  Q
    |||||||||||| |||||||||||||||||||||||||||   ||| ||||||||||||||||||| ||||||||||||||||||||||    
10705677 ccaccatattctgaaacataaatccgacgtcgctatcgtcttcaattagccaaggcatatagcttgtcgttttccatgcgtattcatct 10705765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 355 - 666
Target Start/End: Original strand, 29592530 - 29592841
Alignment:
355 ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgatta 454  Q
    |||||||| ||||  ||||||| ||| ||||||||||| |||||||||| ||||||||||| |||||  ||||||||||||||| || ||| ||||||||    
29592530 ttttgcccccttggcagttaactgtcgaggaatttgaaatccgactgcaattaactgccgatgaaaacttcggtagttaactgtcgaagaaaactgatta 29592629  T
455 tgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataa 554  Q
    |||||||||||| |||||||||||| |||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||||||    
29592630 tgcagacagtggattctgcataattttaaacatttccaaaccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggaaaaataa 29592729  T
555 ttcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaa 654  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
29592730 ttcatacaagattgaaactcggacataaacaagataaatacaatattttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaa 29592829  T
655 acgtttgaaatt 666  Q
    || |||||||||    
29592830 acttttgaaatt 29592841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 429 - 679
Target Start/End: Complemental strand, 40928965 - 40928715
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
40928965 agttaactgccgaggaaaactgattatgcagacagtgagttctgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaa 40928866  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||    
40928865 ccagagcatttccaaaggcaaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaa 40928766  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacatta 679  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
40928765 accgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacatta 40928715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 451 - 880
Target Start/End: Original strand, 12111283 - 12111729
Alignment:
451 attatgcagacag-tgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggca 548  Q
    |||||||||| || |||||| |||||||||||||| ||||| ||||| |||||| | | || ||||||| ||||||||||||||| ||||||||||||||    
12111283 attatgcagataggtgggttatgcataattctaaagcattttcaagttattttt-cagtcagtttttacttgtaattaaaccagagcattttcaaaggca 12111381  T
549 aaataattcatacaa--------------cgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgac 634  Q
    | |||| ||||||||              | ||||||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||    
12111382 atataaatcatacaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttataattgtccataattaaatcaaaccgac 12111481  T
635 atttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaattaa 730  Q
    |||||||| ||||||||| || |||| |||||||||||||| ||| ||| ||||||| |||||||||  |||||||  |||||| ||    | |||||||    
12111482 atttggttcaaattacaccaaagtttaaaattcatcaaaacgttataaattgtccataattaaacaatacattacaactcattacatatcattaaattaa 12111581  T
731 atctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatc 830  Q
    ||| ||||||||||||| | |||||||||||||||||||||||||||||||  ||||||| |||||||||||||  ||| ||||||||||||||||||||    
12111582 atccctacttacattcatcacaattgcatatggaacgaacatacatatata--atattattttccaccatattccgaaatataaatccgacgtcgctatc 12111679  T
831 gtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcat 880  Q
     ||   ||||| ||||||||||||||||| ||||||||||| ||||||||    
12111680 atctttaataaaccaaggcatatagcttgtcgttttccatgtgtattcat 12111729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 382 - 669
Target Start/End: Complemental strand, 34742454 - 34742168
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||| ||| || ||||||||||||||||||| ||||| ||||| |||||||||| |||||| ||  |||||||||||||||   ||||||| |||||    
34742454 aggaattagaaatctgactgcagttaactgccgaggaaaacctcggaagttaactgtcgaggaaaacaaattatgcagacagtgaactctgcatgattct 34742355  T
482 aaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat 580  Q
    ||| |||||||||| ||||||| ||| || ||||||||||||||||||  ||| |||||  |||||||||| |||||||||||| ||||||||| |||||    
34742354 aaaacatttccaagccattttt-cggtcagtttttacctgtaattaaagtagagcatttcgaaaggcaaaa-aattcatacaacattgaaactcggacat 34742257  T
581 aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat 669  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||    
34742256 aaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaatcgacatttgattcaaattacacaaacgtttgaaattcat 34742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 601 - 883
Target Start/End: Complemental strand, 47065148 - 47064858
Alignment:
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagt--------------g 686  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||||||||||||||||  |||||||||              |    
47065148 cttttacaattgtccataattaaatcaaaccgacatttgatttaaattacacaaaagtttgaaattcatcaaaatgttacaaagtatccataattaaatg 47065049  T
687 tccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatata 786  Q
    ||||| ||||||||||||||||||||| |||| ||||||      || ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
47065048 tccataattaaacaactcattacacatgattatattaaa------tccctacttacattcatcacaattgcatatggaacgaacatacatatataatata 47064955  T
787 ttatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||| ||||||||||||   ||||||||||  |||||||||||| ||   ||||| |||||||||||||||||||||||||||||||||||||||||    
47064954 ttattttccaccatatttcgaaacataaatttgacgtcgctatcatctttaataaaccaaggcatatagcttgccgttttccatgcgtattcatctc 47064858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 455 - 671
Target Start/End: Complemental strand, 17838621 - 17838405
Alignment:
455 tgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaata 553  Q
    ||||| ||||| | ||||||| |||||||| |||||||||| | |||||||||||| | ||||| ||||||||||||||| |||||  |||||||||| |    
17838621 tgcaggcagtgagctctgcatcattctaaaacatttccaagcc-ttttttcggccagtatttacttgtaattaaaccagagcatttcgaaaggcaaaaca 17838523  T
554 attcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacaca 653  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
17838522 attcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacaca 17838423  T
654 aacgtttgaaattcatca 671  Q
    ||||||| ||||||||||    
17838422 aacgtttaaaattcatca 17838405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 724 - 883
Target Start/End: Original strand, 29592852 - 29593011
Alignment:
724 aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgt 823  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| |||||    
29592852 aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatgtattatcttccaccatattccgaaacataaatctgacgt 29592951  T
824 cgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
29592952 cgctatcgttgcgaataagccaaggcatataacttgccgttttccatgcgtattcatctc 29593011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 417 - 671
Target Start/End: Complemental strand, 13323739 - 13323485
Alignment:
417 gaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccatttttt 515  Q
    ||||| ||||| ||||||||| |||| || ||  |||||||||| | || | ||| |||||||||||| |||||||||| ||||||| ||| || |||||    
13323739 gaaaacctcgggagttaactgctgagcaaaacaaattatgcagataatgagctcttcataattctaaaacatttccaagccattttt-cgggcagttttt 13323641  T
516 acctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtcc 615  Q
    ||||||||||||| |||| |||||  ||||| |||||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||| |||    
13323640 acctgtaattaaagcagagcatttcgaaaggtaaaataattcatacaacgttgaaactgagacattaacaagaaaaatacaatattttttacaattttcc 13323541  T
616 ataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||    
13323540 ataattaaattaaaccggcatttcgttcaaattacacaaacgtttgaaattcatca 13323485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 429 - 671
Target Start/End: Original strand, 5537907 - 5538147
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa 527  Q
    |||||||||  |||||| ||  |||||| |||||||| | ||||||| |||||||| ||||| |||| ||||||| ||| || |||||||  ||||||||    
5537907 agttaactgccgaggaaaacaaattatgtagacagtgagctctgcatgattctaaaacattttcaagccattttt-cggtcagtttttac--gtaattaa 5538003  T
528 accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta 627  Q
    | |||| |||||  ||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| |    
5538004 agcagagcatttcgaaagggaaaataattcatacaacattgaaactcggacataaacaagaaaaataaaatatcttatacaattgtccataattaaatca 5538103  T
628 aaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
5538104 aaccgacatttggttcaaattatacaaacgtttgaaattcatca 5538147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 590 - 671
Target Start/End: Complemental strand, 10522366 - 10522285
Alignment:
590 aaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||    
10522366 aaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca 10522285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 42499423 - 42499478
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||    
42499423 aggaatttgaaatccgactgcagttaactgccgaggaaaacctcggtagttaactg 42499478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 17840937 - 17840894
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
17840937 tccgactgcagttaactgccgaggaaaacctcggtagttaactg 17840894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 310 - 420
Target Start/End: Complemental strand, 29593460 - 29593349
Alignment:
310 gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa 408  Q
    ||||||||||||||  ||||| | | ||||||| ||||||  ||| |||| ||| || || ||||||| | | |||||||||||||||| ||||||||||    
29593460 gttgttcccacatttgataaggttgtgccacactagtaaaatacaattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagttaa 29593361  T
409 ctgccgaagaaa 420  Q
    ||||||| ||||    
29593360 ctgccgaggaaa 29593349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 445
Target Start/End: Complemental strand, 15074268 - 15074224
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaa 445  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||    
15074268 gcagttaactgccgaggaaaacctcggtagttaactgtcgaggaa 15074224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 9367771 - 9367728
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
9367771 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 9367728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 525
Target Start/End: Complemental strand, 36186490 - 36186416
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaatt 525  Q
    ||||| || |||||| |||||||||||||||||| ||||| |||| || |||||||| || |||||||||||||||    
36186490 attatacatacagtgagttctgcataattctaaagcattttcaagcca-tttttcggtcagtttttacctgtaatt 36186416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 40587675 - 40587730
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||| ||| |||||||||||||||||| ||| ||||| ||| |||||||||||    
40587675 aggaattagaaatccgactgcagttaactgtcgaggaaaacctcagtagttaactg 40587730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 30355281 - 30355243
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| ||||| |||||||||||||||    
30355281 ctgcagttaactgccgaggaaaacctcggtagttaactg 30355243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 35606817 - 35606858
Alignment:
396 cgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||| ||||| |||||||||||||||    
35606817 cgacggcagttaactgccgaggaaaacctcggtagttaactg 35606858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 40323209 - 40323262
Alignment:
310 gttgttcccacattacataa-gctcggccacaccagtaaatgacatttttgccc 362  Q
    |||||||||||||||||||| |||  ||||||  ||||||||||||||||||||    
40323209 gttgttcccacattacataaggctgtgccacatgagtaaatgacatttttgccc 40323262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 343; Significance: 0; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 25890008 - 25890503
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| ||||||||||||||||| |||| ||||| ||||||||| |||||  |||||| ||||||||||||||||    |||||||||||||||    
25890008 aggaatttgaaatccgactgcagttaactaccgaggaaaacctcggtagtaaactgccgaggaaaactgattatgcagacaacaagttctgcataattct 25890107  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||    
25890108 aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata 25890207  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca 681  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
25890208 aacaagataaatacaatatcttatacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca 25890307  T
682 aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata 781  Q
    |||||| ||| |||||||||||||||||||||||||      |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
25890308 aagtgttcataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata 25890401  T
782 atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc 881  Q
    ||||||||| |||||||||||||| |||||||||||||||||||   ||||||||||||||| ||||||||| |||||| |||||||| |||||||||||    
25890402 atatattattttccaccatattctgaaacataaatccgacgtcgacgtcgtcgcgaataagcaaaggcatatcgcttgctgttttccacgcgtattcatc 25890501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 34122538 - 34123047
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||||    
34122538 aggaatttgaaatccggctgcagttaactgccgaggaaaagctcggtagttaactgccgaggaaaactgattatgcagacagtggattctgcataattct 34122637  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||| |||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||    
34122638 aaatattttcaagccattttttcggccagtttttacctgtaattaaaccagagcattttcaaaggcaaaataattcatacaacattgaaactcggacata 34122737  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca 681  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||    
34122738 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaaggttaca 34122837  T
682 --------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacg 767  Q
                  |||||||||| ||||||||||||||||||||||||||||||||| | |      ||||||||||||| ||||||||||||||||||    
34122838 aggtgttcataattaagtgtccataattaaacaactcattacacatcattaaattaaattca------tacttacattcaatgcaattgcatatggaacg 34122931  T
768 aacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttc 867  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||    
34122932 aacatatatatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttaccgttttc 34123031  T
868 catgcgtattcatctc 883  Q
    ||||||||||||||||    
34123032 catgcgtattcatctc 34123047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 27863464 - 27863912
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  |||||| |||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||    
27863464 agttaactgccgaggaaaactgattatgcagatagtgggttctgcataattctaaacattttcaagccattttttcggccagtttttacctgtaattaaa 27863563  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| ||||| |||||||||||||||||| ||||  ||||||||| ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||    
27863564 ccagaacatttccaaaggcaaaataattcacacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaattaa 27863663  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt 728  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||      |||||    
27863664 accgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattacacatcatt------aaatt 27863757  T
729 aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta 828  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
27863758 aaatccctacttacattcaacgcaattgcaaatggaacgaacatacatatataatatattatcttccaccatattccaaaacataaatccgacgtcgctg 27863857  T
829 tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
27863858 tcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctc 27863912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 13563702 - 13564150
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  |||||  ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||    
13563702 agttaactgccgaggagaactgattatgcagacagtgggttctgcataattataaacatttccaagccattttttcggctagtttttacctgtaattaaa 13563801  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||  ||||||| ||||||||||||||||||||| ||||||||||||||    
13563802 ccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaa 13563901  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt 728  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||      |||||    
13563902 accgacatttggttaaaattaaacaaacgtttgaaattcattaaaacattacaaagtgtccataattaaacaactcattacacatcatt------aaatt 13563995  T
729 aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta 828  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
13563996 aaatccctacttacattcaacgcaattgcatatggatcgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgcta 13564095  T
829 tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||||||||    
13564096 tcatcgcaaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 13564150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 37814615 - 37815091
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| || ||||||||||||  || |||  ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||    
37814615 gcagttaactgccgaggaaaaccttggtagttaactgccgaagaaatctgataatgcagacagtgggttctgcatagttctaaacatttccaagccattt 37814714  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    || |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||  ||||||| ||||||||    
37814715 ttccggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatat 37814814  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca 700  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||     
37814815 cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaact 37814914  T
701 actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 800  Q
    |||||||||||||||||      |||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
37814915 actcattacacatcatt------aaattaaatccctacttactttcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccat 37815008  T
801 attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
37815009 attccgaaacataaatccgacgtcgccgtcgtcgtgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 37815091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 424 - 883
Target Start/End: Original strand, 38855771 - 38856224
Alignment:
424 tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa 523  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| || |||||||||||||    
38855771 tcggcagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttt-cggtcagtttttacctgtaa 38855869  T
524 ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa 623  Q
    ||||||||||| |||| ||||||| |||||||||||||||  ||||||||| | ||||| |||||||||||||||||||||||||||||| | |||||||    
38855870 ttaaaccagacaatttccaaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcgtaattaa 38855969  T
624 attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt 722  Q
    |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||         
38855970 attaaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt----- 38856064  T
723 aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg 822  Q
     ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
38856065 -aaattcaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 38856163  T
823 tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
38856164 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 38856224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 423 - 825
Target Start/End: Complemental strand, 34080149 - 34079753
Alignment:
423 ctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgta 522  Q
    ||||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
34080149 ctcggcagttaactgcagaggaaaactgattatgcagacagtgggttctgcataattctaaacatttccaagccattttttcggccagtttttacctgta 34080050  T
523 attaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataatta 622  Q
    ||||||||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||| |||||||| ||||||||||||||||||||| ||||||||    
34080049 attaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataatta 34079950  T
623 aattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt 722  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
34079949 aattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattacacatcattaaat- 34079851  T
723 aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg 822  Q
         ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
34079850 -----taaatccttacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacataaatccgccg 34079756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 299; E-Value: 1e-167
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 7017526 - 7018007
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||| ||||||||||||  | | ||||| |||||||||||||||  |||||| |||||||||||||||||||||| ||||||||||||    
7017526 aggaatttgaaatccggctgcagttaactctcaaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattct 7017624  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    |||||||| |||| |||||||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||    
7017625 aaacattttcaagccattttttcggccagtttttatctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata 7017724  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca 681  Q
    |  ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
7017725 atgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca 7017824  T
682 aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata 781  Q
    |||||||||| ||||||| |||||||||||||||||      |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
7017825 aagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata 7017918  T
782 atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc 881  Q
    ||||||||||||||||||||||||             ||||||||  ||||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
7017919 atatattatcttccaccatattct-------------gacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccattttccatgtgtattcatc 7018005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 424 - 883
Target Start/End: Original strand, 11029064 - 11029516
Alignment:
424 tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa 523  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||    
11029064 tcggcagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttttcgaccagtttttacctgtaa 11029163  T
524 ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa 623  Q
    ||||||||||| |||| ||||||| |||||||||||||||  ||||||||| | ||||| |||||||||| ||||||||||||||||||| |||||||||    
11029164 ttaaaccagacaatttccaaaggctaaataattcatacaatattgaaactcggtcataatcaagataaatgcaatatcttttacaattgttcataattaa 11029263  T
624 attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt 722  Q
    |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||  |||||| ||||||| |||||| ||||||||||         
11029264 attaaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaa--gtccataattaaactactcatcacacatcatt----- 11029356  T
723 aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg 822  Q
     |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
11029357 -aaattaaatccctacttacattcaacgcaattacatatgaaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 11029455  T
823 tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
11029456 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 11029516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 499 - 883
Target Start/End: Original strand, 7796708 - 7797086
Alignment:
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| |  |||||||||| |||||||||    
7796708 tttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggttataaacaagaaaaatacaat 7796807  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    |||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
7796808 atcttttataattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaa 7796907  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    |||||||||||||||||||      |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
7796908 caactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 7797001  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
7797002 atattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctc 7797086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 440 - 883
Target Start/End: Original strand, 28882066 - 28882497
Alignment:
440 gaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattt 539  Q
    |||||| ||| ||||||||| |||| |||||| ||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
28882066 gaggaaaactaattatgcagccagtaggttctacataattctaagcatttccaagccattttttcggccagtttttacctgtaattaaaccagagcattt 28882165  T
540 tcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg 639  Q
     ||||||||||      |||||||  ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
28882166 acaaaggcaaa------catacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaaattaaaccgacatttc 28882259  T
640 gttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctact 739  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||||||| | |||    
28882260 gttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccccact 28882353  T
740 tacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaat 839  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||| |||    
28882354 tacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcaaat 28882453  T
840 aagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||| || ||||||||||||||||||||||||||||||||||||    
28882454 aagcaaatgcatatagcttgccgttttccatgcgtattcatctc 28882497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 423 - 883
Target Start/End: Complemental strand, 1039823 - 1039356
Alignment:
423 ctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgta 522  Q
    ||||| |||||||||  |||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||| |||||||| || || ||||||||||||    
1039823 ctcggcagttaactgccgaggaaaactgattatgcagacagtgagttctgcataatcctaaatatttccaagccattttttgggtcagtttttacctgta 1039724  T
523 attaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataatta 622  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
1039723 attaaaccagagcattttcaaaggcaaaataattcatacaagattgaaactcggacataaacacgataaatacaatatcttttacaattgtccataatta 1039624  T
623 aattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgatta--------------aacaactcatta 708  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||              ||||||||||||    
1039623 aattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtctataattaagtgtcaataatttaacaactcatta 1039524  T
709 cacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaa 808  Q
    || ||||||      |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||  ||    
1039523 catatcatt------aaattaaatccctacttacattcaacgcaactgcatatggtacgaacatacatatataacatattattttccaccatattc-caa 1039431  T
809 acataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
1039430 acataaatccgatgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 1039356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 400 - 883
Target Start/End: Complemental strand, 33995189 - 33994713
Alignment:
400 tgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcat 498  Q
    |||| ||||||||||| ||||| ||||| |||||||||  |||||| ||   |||||||||||||||||| ||||||||| | || |||||||||| |||    
33995189 tgcaattaactgccgaggaaaacctcgggagttaactgccgaggaaaacat-ttatgcagacagtgggttatgcataattgttaagcatttccaagccat 33995091  T
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat 598  Q
    |||| |||||| ||||||| ||||||| ||||||| ||||| ||||||||| |||| | ||||||| || |||||||| ||||||||||  |||||||||    
33995090 tttt-cggccagtttttacatgtaatttaaccagaacatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaat 33994992  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||| ||| ||||||||||| ||||| | ||||| ||||||||||  ||||    
33994991 atcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacaaaaaagtttgaaattcttcaaatcgttacatagtgtccatgcataaa 33994892  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    |||| ||||||||||||||||||      |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
33994891 caacacattacacatcattaaat------taaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 33994798  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||   ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
33994797 atattaagaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagtttgccgttgtccatgcgtattcatctc 33994713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 452 - 883
Target Start/End: Original strand, 24053237 - 24053672
Alignment:
452 ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    |||||||||||||| ||||||||||||| | || ||||| |||| |||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||     
24053237 ttatgcagacagtgagttctgcataattgtcaagcattttcaagccatttt-tcggccagtttttacctgtaatttaaccagagcattttcaaaggcaat 24053335  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||| | ||||||| || |||||||| ||||||||||  ||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| |||    
24053336 ataacttatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattacatcaaaccgacatttggttcaaaatac 24053435  T
651 acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattc 746  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||  ||||||  |||||| |     | |||||| ||| ||| ||||||||    
24053436 acaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacatattacaactcattacacatcattaaattatatccctaattacattc 24053535  T
747 aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa 846  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||  |||||    
24053536 aacgcaattgcatatagaaagaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgtcgctatcgtcttcaattcgccaa 24053635  T
847 ggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||| |||||||||||||||||||||||    
24053636 ggcatatagcttgtcgttttccatgcgtattcatctc 24053672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 452 - 883
Target Start/End: Original strand, 24050110 - 24050547
Alignment:
452 ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    ||||||||| |||| ||||||||||||| | || |||||||||| |||||| ||||||| |||| || ||||||| ||||||| ||||  |||||| ||     
24050110 ttatgcagatagtgagttctgcataattgttaagcatttccaagccatttt-tcggccagttttcacatgtaatttaaccagagcattaccaaaggaaat 24050208  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||| | ||||||| || ||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||    
24050209 ataacttatacaacatttaaattcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatac 24050308  T
651 acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattc 746  Q
    ||||| ||||||||||||||||||| ||||| ||| ||||| |||||||||| |||||||  |||||| |     | |||||| ||| ||||||||||||    
24050309 acaaaagtttgaaattcatcaaaacgttacatagtatccataattaaacaacacattacaactcattacacatcattaaattatatccctacttacattc 24050408  T
747 aacgcaattgcatatggaacgaacatacatatata--atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcc 844  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||   |||  |||    
24050409 aacgcaattgcatatagaacgaacatacatatataatatatattatcttccaccatattctgaaacataaatccgacgtcgctatcgtcttcaattcgcc 24050508  T
845 aaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||||||||||||    
24050509 aaggcatatagcttgccgttttccatgcgtattcatctc 24050547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 399 - 833
Target Start/End: Original strand, 25877652 - 25878089
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    ||||| ||||||||||| |||||  ||||||||||||||  |||||| ||   ||||||||||||||||||||||||||||||||| |||||||||| ||    
25877652 ctgcaattaactgccgaggaaaacttcggtagttaactgccgaggaaaacat-ttatgcagacagtgggttctgcataattctaaagcatttccaagcca 25877750  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||| |||| |||| ||||||||| ||||||||  | ||||||||||| ||||||||    
25877751 tttt-tcggccagtttttacctgtaattaaaccagagcattttcaaaagcaatataaatcatacaacattgaaacttggtcataaacaagaaaaatacaa 25877849  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca--------------aa 683  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||| |||||              ||    
25877850 tatcttttacaattgtccataattaaat--aaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaa 25877947  T
684 gtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataat 783  Q
    |||||||| ||||||||||||||||||| | |||      | |||||||| |||||||||  || | |||||||||||||||| ||||||||||||||||    
25877948 gtgtccataattaaacaactcattacacgtgatt------atattaaatccctacttaca--catcacaattgcatatggaacaaacatacatatataat 25878039  T
784 atattatcttccaccatattctaaaacataaatccgacgtcgctatcgtc 833  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||||    
25878040 atattattttccaccatattccgaaacataaatccgacgtcgctatcgtc 25878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 382 - 653
Target Start/End: Complemental strand, 28388578 - 28388307
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||  ||||||||||||||||| ||||| |||||||||||||||  || ||| ||||||||||||||||||||||||||||||||| |    
28388578 aggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaactgccgaagaaaactgattatgcagacagtgggttctgcataatttt 28388479  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| || ||||||    
28388478 aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaattcggacata 28388379  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacaca 653  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
28388378 aacaaaataaatacaatattttttacaattgtccataattaaattaaaccgacatttggttcaaattacaca 28388307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 655 - 883
Target Start/End: Complemental strand, 14280764 - 14280542
Alignment:
655 acgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaat 754  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||      || |||||||||||||| |||||    
14280764 acgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcattaaattaaa------tccctacttacattcaatgcaat 14280671  T
755 tgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatata 854  Q
    | |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||  ||||||||||||||| ||||||||||    
14280670 tacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatata 14280571  T
855 gcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||    
14280570 gcttgccgttttccatgcgtattcatctc 14280542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 400 - 671
Target Start/End: Complemental strand, 7762285 - 7762013
Alignment:
400 tgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcat 498  Q
    |||||||||||| ||| ||||| ||| | |||||||||  |||||| | ||||||||||| ||||| | ||||||| |||||||| ||||| |||| | |    
7762285 tgcagttaactgtcgaggaaaacctcaggagttaactgccgaggaaaattgattatgcaggcagtgagctctgcatcattctaaaacattttcaagcctt 7762186  T
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||||| ||||||||||||||||||||| | |||||| |||||||||| |||||||||||| |||||||||  |||||||||||||| |||||||    
7762185 tttttcggccagtttttacctgtaattaaaccaaagcattttgaaaggcaaaacaattcatacaacattgaaactcgaacataaacaagatagatacaat 7762086  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
7762085 atcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 7762013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 30352510 - 30352939
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||||  || ||||||||| | || ||||| |||| ||||||| ||  || |||||| |||||| |||| |||| ||||| |||| ||||    
30352510 attatgcagacagtgaattttgcataattgttaagcattttcaagccattttt-cgatcagtttttatctgtaaataaatcagagcatttccaaatgcaa 30352608  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     ||||  |||||||| || |||||||| ||||||  ||| ||||||||||||||||     ||||||||||||||| |||||  ||||||||| ||| ||    
30352609 tataagccatacaacatttaaactcagtcataaa--agaaaaatacaatatctttt-----tgtccataattaaatcaaaccagcatttggttcaaaata 30352701  T
650 cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatta----aaattaaatctctacttacatt 745  Q
    |||||| ||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||  |||||| ||      ||||||||||| ||||||||||    
30352702 cacaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaacagcacattacaactcattacatatcaataaattaaatctttacttacatt 30352801  T
746 caacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcca 845  Q
    ||| ||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||  |||||||||| ||||||||||||||||   || ||||||    
30352802 caatgcaattgcatatggaaaaaacatacatatataatatattattttccacaatattccgaaacataaatacgacgtcgctatcgtctttaacaagcca 30352901  T
846 aggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||| ||||||||||| ||||| ||||||||||    
30352902 aggcatataacttgccgtttttcatgcatattcatctc 30352939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 413 - 671
Target Start/End: Original strand, 38407192 - 38407449
Alignment:
413 cgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccatt 511  Q
    |||||||||  ||||||||||||||  || ||| ||  |||||| |||||||| | ||||||| |||||||| |||||||||| ||||||  |||||| |    
38407192 cgaagaaaacatcggtagttaactgccgaagaaaacaaattatgtagacagtgagctctgcatgattctaaaacatttccaagccatttt--cggccagt 38407289  T
512 ttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaatt 611  Q
    ||||||||||||||||| |||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
38407290 ttttacctgtaattaaagcagaacatttcgaaaggcaaaataattcatacaacattgaaactcagacataaacaagaaaaatacaatatcttttagaatt 38407389  T
612 gtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
38407390 gtccataattaaatcaaaccggcatttggttcaaattacacaaacgtttgaaattcatca 38407449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 399 - 671
Target Start/End: Complemental strand, 41799809 - 41799539
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct-----aaacatttccaa 493  Q
    ||||||||||||||||| |||||  |||| ||||||||| ||||||| ||     | |||||||||| | ||||||| |||||     |||||||| |||    
41799809 ctgcagttaactgccgatgaaaacttcggaagttaactgctgaggaaaac-----aagcagacagtgagctctgcatgattctttctaaaacattttcaa 41799715  T
494 gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat 593  Q
    | ||||||| |||||| |||||||||||||||||| |||| |||||  ||||||||||||||||||||||| ||||||||  ||||||||||||| ||||    
41799714 gccattttt-cggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaacttggacataaacaagaaaaat 41799616  T
594 acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
41799615 acaat-ttttttacaattgtccataattaaattaaaccgacatttgattcaaattacacaaacgtttgaaattcatca 41799539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 644 - 883
Target Start/End: Original strand, 4196792 - 4197023
Alignment:
644 aaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttaca 743  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||| |||||||||||||||||| || |||| ||||||      || |||||||||    
4196792 aaattacacaaacgtttggtattcatcaaaacgttacaaagtgtccataattaaacaactcattacatatgattatattaaa------tccctacttaca 4196885  T
744 ttcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagc 843  Q
    |||| | |||||||||||||||||||  ||||||||||||||||||| ||| |||||||||  ||||||||||| |||||||||||||||   |||||||    
4196886 ttcatcacaattgcatatggaacgaa--tacatatataatatattattttcgaccatattccgaaacataaatctgacgtcgctatcgtctttaataagc 4196983  T
844 caaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||| ||||||| |||||||||||| ||||||||||    
4196984 caaggcatgtagcttgtcgttttccatgcatattcatctc 4197023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 506 - 834
Target Start/End: Original strand, 6267612 - 6267933
Alignment:
506 gccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatctttt 605  Q
    |||||||||||||| ||||| | ||||| ||||| ||||||||| |  | || |||||| || |  ||||| ||||||||||| ||||||| ||||||||    
6267612 gccattttttacctataattcagccagagcatttccaaaggcaatactagtcgtacaacatttatcctcagtcataaacaagaaaaatacattatctttt 6267711  T
606 acaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactca 705  Q
    ||  || ||||||||||||| || |||||||||  |||||||| ||  || ||||||||||||||| ||||||| | ||||||||| |||||||||| ||    
6267712 accgttatccataattaaatcaatccgacatttcattaaaattgcaagaatgtttgaaattcatcataacattaaagagtgtccataattaaacaacaca 6267811  T
706 ttacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattct 805  Q
    ||||| ||||||      |||||||||||||||| |||||| ||||| ||||| ||||||| || |||||||||||||||||||||||||| |||||||     
6267812 ttacatatcatt------aaattaaatctctactgacattctacgcagttgcagatggaacaaaaatacatatataatatattatcttccatcatattc- 6267904  T
806 aaaacataaatccgacgtcgctatcgtcg 834  Q
      ||||||||| ||||||||| |||||||    
6267905 cgaacataaattcgacgtcgccatcgtcg 6267933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 724 - 882
Target Start/End: Complemental strand, 28387978 - 28387821
Alignment:
724 aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgt 823  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||    
28387978 aaattaaatccctacttacaatcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgt 28387879  T
824 cgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct 882  Q
    ||||||||||| |||||| | |||||||||| |||| ||||||||||| ||||||||||    
28387878 cgctatcgtcgtgaataa-caaaggcatataacttgtcgttttccatgtgtattcatct 28387821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 753 - 883
Target Start/End: Complemental strand, 43179559 - 43179429
Alignment:
753 attgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcata 852  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||||    
43179559 attgcagatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatcaaacgtcgctatcgtcgcgaataagccaaggcata 43179460  T
853 tagcttgccgttttccatgcgtattcatctc 883  Q
    |||||| ||||||||||||||| ||||||||    
43179459 tagcttaccgttttccatgcgtgttcatctc 43179429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 451 - 603
Target Start/End: Original strand, 4196637 - 4196790
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||| || ||||||||||||||||||||||| ||||| |||||||||    
4196637 attatgcagacagtgggttctgcataattctaaagcatttccaagctattttt-cggtcaatttttacctgtaattaaaccagagcatttccaaaggcaa 4196735  T
550 aataattcatacaacgttgaaactcagacataaacaag-ataaatacaatatctt 603  Q
     |||| ||||||||| ||||||||| | |||||||||| | ||||||||||||||    
4196736 tataaatcatacaacattgaaactcggtcataaacaagaaaaaatacaatatctt 4196790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 500 - 710
Target Start/End: Complemental strand, 43179841 - 43179631
Alignment:
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    ||||||| || ||||||||||||||| ||||||| ||||||||||||||| |  | || |||||| || | |||| | || |||||||| ||||| | ||    
43179841 ttttcggtcagtttttacctgtaattcaaccagagcattttcaaaggcaatactagtcgtacaacatttatactcggtcaaaaacaagaaaaatatatta 43179742  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac 699  Q
    ||||||||| ||||||||||||||   || || |||||| ||||||||||||| || ||||||||||||||||||| ||| | ||||||||| |||||||    
43179741 tcttttacacttgtccataattaatacaatccaacatttcgttaaaattacacgaatgtttgaaattcatcaaaacgttaaagagtgtccataattaaac 43179642  T
700 aactcattaca 710  Q
    ||| |||||||    
43179641 aacacattaca 43179631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 401 - 560
Target Start/End: Complemental strand, 14280940 - 14280781
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| ||||||||||||| |  ||||||   | |||||||||||||  ||||||||||||||||||  ||||||||| |||||    
14280940 gcagttaactgccgaggaaaacctcggtagttaacggccgaggaaatttaattatgcagacagcaggttctgcataattctaagtatttccaagccattt 14280841  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcata 560  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||| | || ||||||||||    
14280840 tttcggccagtttttacctgtaattaaaccagagcatttccaaatgtaatataattcata 14280781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 312 - 437
Target Start/End: Original strand, 7757268 - 7757394
Alignment:
312 tgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaact 410  Q
    ||||||||||||||||||| ||  ||||||| |||||||||| ||||||||| || || ||||||| | | | |  || ||| |||| ||||||||||||    
7757268 tgttcccacattacataagactatgccacacgagtaaatgacgtttttgccccctcgacagttaactgccgaagttttagaaatccggctgcagttaact 7757367  T
411 gccgaagaaaatctcggtagttaactg 437  Q
    ||||| ||||| |||| ||||||||||    
7757368 gccgaggaaaacctcgctagttaactg 7757394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 422
Target Start/End: Complemental strand, 13568207 - 13568094
Alignment:
310 gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa 408  Q
    ||||||||||||||||||||| ||  |||| || |||||||||| ||||| |||  | | |||||||| | | ||||||||||| |||| ||||||||||    
13568207 gttgttcccacattacataaggctgtgccatacgagtaaatgacgtttttaccccatcggtagttaactgccgaggaatttgaaatccggctgcagttaa 13568108  T
409 ctgccgaagaaaat 422  Q
    ||||||| ||||||    
13568107 ctgccgaggaaaat 13568094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 34124067 - 34123939
Alignment:
310 gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa 408  Q
    ||||||||||||||  ||||| | | ||||||||||||||  ||  |||||||| || |  ||||||| ||| || |||||||| |||| ||||||||||    
34124067 gttgttcccacatttaataaggttgtgccacaccagtaaaatacgattttgccccctcggcagttaactgtcgagaaatttgaaatccggctgcagttaa 34123968  T
409 ctgccgaagaaaatctcggtagttaactg 437  Q
    ||||| | ||||| |||||||||||||||    
34123967 ctgccaaggaaaacctcggtagttaactg 34123939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 17966933 - 17966882
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaa 445  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| |||||||    
17966933 tccgactgcagttaactaccgaggaaaatctcggtagttaactgctgaggaa 17966882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 384 - 433
Target Start/End: Original strand, 41798834 - 41798883
Alignment:
384 gaatttgaattccgactgcagttaactgccgaagaaaatctcggtagtta 433  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||    
41798834 gaatttgaaatccggctgcagttaactgccgaagaaaacctcggtagtta 41798883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 39743234 - 39743154
Alignment:
355 ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaac 435  Q
    |||||||| || || ||||||| | | ||||||||||| | |||||||||||||||||||| ||||| ||||| |||||||    
39743234 ttttgccccctcgacagttaactgccgaggaatttgaaattcgactgcagttaactgccgaggaaaacctcggcagttaac 39743154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 437
Target Start/End: Complemental strand, 542861 - 542794
Alignment:
370 agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||| ||| ||||||| ||| |||| |||||| |||||||||| |||| ||||||||||||||||    
542861 agttaactgtcgaggaattagaaatccggctgcagctaactgccgaggaaactctcggtagttaactg 542794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 28387283 - 28387338
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||||||| |||||||||| |||||| ||||  |||||||||||||||    
28387283 aggaatttgaattccggctgcagttaattgccgaggaaatcctcggtagttaactg 28387338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 25497542 - 25497580
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| |||||||||||||||||||||    
25497542 ctgcagttaactgccgaggaaaatctcggtagttaactg 25497580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 11346038 - 11346083
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgagga 444  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||    
11346038 ctgcagttaactgccgaggaaaacctcggtagttaactgtcgagga 11346083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 8088 - 8052
Alignment:
400 tgcagttaactgccgaagaaaatctcggtagttaact 436  Q
    |||||||||||||||| ||||||||||||||||||||    
8088 tgcagttaactgccgaggaaaatctcggtagttaact 8052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 8577007 - 8577043
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||||||| |||||||||||||||    
8577007 gcagttaactgccgaagaaaacctcggtagttaactg 8577043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 573 - 665
Target Start/End: Complemental strand, 16440284 - 16440192
Alignment:
573 tcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaat 665  Q
    |||| |||||||||||  ||||||  || ||||| ||||| |||||||||||| || |||| |||| ||||||||||||| || |||| ||||    
16440284 tcagtcataaacaagaacaatacataatattttagaattgaccataattaaatcaatccgatatttcgttaaaattacacgaatgtttaaaat 16440192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 437
Target Start/End: Complemental strand, 4204296 - 4204215
Alignment:
354 tttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||| || ||||||| ||| || ||||||||  ||| ||||||||||||| ||| ||||| |||||||||||||||    
4204296 tttttgccctctcgacagttaactgtcgagaaatttgaaa-ccg-ctgcagttaactgtcgaggaaaacctcggtagttaactg 4204215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 19037517 - 19037474
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
19037517 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 19037474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 25897138 - 25897083
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||| |||| ||||||||||||||| | ||||  |||||||||||||||    
25897138 aggaatttgaactccggctgcagttaactgcccaggaaatcctcggtagttaactg 25897083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 41201759 - 41201798
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgt 438  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
41201759 ctgcagttaactgccgaggaaaacctcggtagttaactgt 41201798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 400 - 442
Target Start/End: Complemental strand, 30354437 - 30354395
Alignment:
400 tgcagttaactgccgaagaaaatctcggtagttaactgttgag 442  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||    
30354437 tgcagttaactgtcgaggaaaacctcggtagttaactgttgag 30354395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 30708913 - 30708863
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactga 451  Q
    ||||||||||||||||||||| |||| ||||||||||  |||||| |||||    
30708913 gcagttaactgccgaagaaaacctcgatagttaactgccgaggaaaactga 30708863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 5804 - 5845
Alignment:
396 cgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||| |||||| ||||| |||||||||||||||    
5804 cgactgcagttaattgccgaggaaaacctcggtagttaactg 5845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 674
Target Start/End: Original strand, 30292313 - 30292382
Alignment:
605 tacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaa 674  Q
    |||||||| ||| |||||||| ||  |||||||| ||||||||||||| || ||| |||||||| |||||    
30292313 tacaattgaccaaaattaaatcaattcgacatttcgttaaaattacacgaatgttcgaaattcaacaaaa 30292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 484
Target Start/End: Original strand, 31094618 - 31094651
Alignment:
451 attatgcagacagtgggttctgcataattctaaa 484  Q
    |||||||||||||||| |||||||||||||||||    
31094618 attatgcagacagtggattctgcataattctaaa 31094651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 34682244 - 34682325
Alignment:
355 ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaact 436  Q
    |||||| | ||||| ||||||| ||| |||||||  ||  ||| ||||||||||||||||| ||||| ||||| ||||||||    
34682244 ttttgctcccttgacagttaactgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaacctcgggagttaact 34682325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 342; Significance: 0; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 355 - 883
Target Start/End: Original strand, 35962294 - 35962816
Alignment:
355 ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgatta 454  Q
    ||||||||||| |  ||||||| ||| ||||||||||| |||| || |||||||||||||| ||||| ||||| |||||||||  |||||| ||||||||    
35962294 ttttgccctctcggcagttaactgtcgaggaatttgaaatccggctacagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgatta 35962393  T
455 tgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataa 554  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||| ||||||  |||   |||||||||||||    
35962394 tgcaggcagtgggttctgcataattctaaacattttcaagccattttttcggccaatttttacgtgtaattataccagagtattacaaaaggcaaaataa 35962493  T
555 ttcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaa 654  Q
    |||||||||| || |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
35962494 ttcatacaacattaaaactcggatataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgaaatttggttcaaattacacaa 35962593  T
655 acgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaat 754  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||      |||||||||  ||||||||||||||||||||    
35962594 acgtttgaaattcatcaaaacgttacaaagtgtgcataattaaacaactcattgcacatcatt------aaattaaattcctacttacattcaacgcaat 35962687  T
755 tgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatata 854  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
35962688 tgcatatggaacgaacatacgtatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatata 35962787  T
855 gcttgccgttttccatgcgtattcatctc 883  Q
    ||||| |||||||||||||||||||||||    
35962788 gcttgtcgttttccatgcgtattcatctc 35962816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 39518 - 39966
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
39518 agttaactgccgaggaaaactgattatgcagacagtgagttctgcataattctaaacatttccaagccattttttcggccaatttttacctgtaattaaa 39617  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
39618 ccagagcatttccaaaggcaaaataattcatacaagattgaacctcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 39717  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt 728  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||      |||||    
39718 accgacatttggttaaaattaaacaaacatttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattacacatcatt------aaatt 39811  T
729 aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta 828  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||      
39812 aaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatccgacatcgccg 39911  T
829 tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||| |||||||||| ||| ||||||||||| |||||||||||||||||||||||    
39912 tcgttgcgaataagcaaagacatatagcttgtcgttttccatgcgtattcatctc 39966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 23923995 - 23924474
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgtt----gaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtc 496  Q
    ||||||||||||||| |||||  |||||||| |||||      |||||| |||||||||||||||| ||| || ||||||||||||||||||| |||| |    
23923995 gcagttaactgccgaggaaaacttcggtagtaaactgactgccgaggaaaactgattatgcagacaatggattatgcataattctaaacattttcaagcc 23924094  T
497 attttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaataca 596  Q
    |||||| ||| || ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||  ||||||||| |||||||| ||||||| ||||    
23924095 attttt-cggtcagtttttacctgtaattaaactagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaaaaagataagtaca 23924193  T
597 atatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgatta 696  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
23924194 atatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataatta 23924293  T
697 aacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcca 796  Q
    |||||||||||||||||||||      |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
23924294 aacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaactgcatatggaacgaacatacatatataatatattattttcca 23924387  T
797 ccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
23924388 ccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 23924474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 412 - 883
Target Start/End: Complemental strand, 31960090 - 31959611
Alignment:
412 ccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccatt 511  Q
    |||| ||||| ||||||||| |||||| |||||| |||||||||||||||||   ||||||||||||||||||||||| |||| |||||||||||||| |    
31960090 ccgaggaaaacctcggtagtaaactgtcgaggaaaactgattatgcagacagcaagttctgcataattctaaacatttgcaagccattttttcggccagt 31959991  T
512 ttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaatt 611  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||    
31959990 ttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatataagattgaaactcggacataaacaagataaatacaatatcttttacaatt 31959891  T
612 gtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgt--------------ccatgattaa 697  Q
    || ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||              |||| |||||    
31959890 gttcatgattaaattaaacccacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaattgtccataattaa 31959791  T
698 acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 797  Q
    ||||||||||||||||||||      ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
31959790 acaactcattacacatcatt------aaattaaatccatacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccac 31959697  T
798 catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
31959696 catattccaaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 31959611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 7344597 - 7344120
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| ||||| |||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
7344597 gcagttaactgccgaggaaaacctcgggagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 7344498  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    || |||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
7344497 tt-cggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 7344399  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| ||||||    
7344398 atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 7344299  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||||||      |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
7344298 ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 7344205  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
7344204 atattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 7344120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 32375684 - 32376161
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
32375684 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 32375783  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||  |||||| || ||||||||||   |   |||||||||  ||||||  ||||||||||||||    
32375784 tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcgaacataatgaagataaatacaat 32375882  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
32375883 atcttttacaattgttaataattaaattaaatcgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 32375982  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||||||||||      || |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
32375983 ctactcattacacatcattaaattaaa------tccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 32376076  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
32376077 atattccgaaacataaatccgacgtcgccatcgtcgcgaataagcaaaggcatatagcttgccgtttcccatgcgtattcatctc 32376161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 8419437 - 8419914
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  ||||||   |||||||||||||| |  |||||||||||||||||  ||||||||| |||||    
8419437 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacaataagttctgcataattctaagtatttccaagccattt 8419536  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| |||||| |||||||||||||||| ||||  |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
8419537 tttcggccagtttttatctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 8419635  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
8419636 atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 8419735  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||      |||||||||| |||||||||||||| |||||| |||||||||||||| ||||||||||||||||| |||||||||    
8419736 ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacgtacatatataatatattgtcttccacc 8419829  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
8419830 atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 8419914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 466 - 883
Target Start/End: Original strand, 30301231 - 30301644
Alignment:
466 ggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aa 563  Q
    ||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||   |     
30301231 ggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtat 30301330  T
564 cgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaa 663  Q
      ||||||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||    
30301331 gattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaa 30301430  T
664 attcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatgg 763  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||||||| |||||||||||||| |||||| |||||||    
30301431 attcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatgg 30301524  T
764 aacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgt 863  Q
    ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||    
30301525 aacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgt 30301624  T
864 tttccatgcgtattcatctc 883  Q
    ||||||||||||||||||||    
30301625 tttccatgcgtattcatctc 30301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 451 - 883
Target Start/End: Complemental strand, 43377283 - 43376843
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||| |||||||||    
43377283 attatgcagacagtgggttctacataattctaaagcatttccaagccattttt-cggccagtttttacctgtaattaaaccagagcatttccaaaggcaa 43377185  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||| || |||    
43377184 tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatgaaaccgaaatttggttcaagtta 43377085  T
650 cacaaacgtttgaaattcatcaaaacattacaaagt--------------gtccatgattaaacaactcattacacatcattaaattaaaattaaatctc 735  Q
    |||||||||||||||||||||||||| |||||||||              |||||| |||||||||||||||||||||||||      |||||||||  |    
43377084 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccttaattaagtgtccataattaaacaactcattacacatcatt------aaattaaattcc 43376991  T
736 tacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgc 835  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||    
43376990 tacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcactatcgtcgc 43376891  T
836 gaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||    
43376890 gaataaaccaatgcatatagcttgccgttttccatgcgtattcgtctc 43376843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 417 - 883
Target Start/End: Original strand, 43679446 - 43679905
Alignment:
417 gaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccatttttt 515  Q
    ||||| |||||||||||||||  || ||| | | ||||| ||||||||||||| |||||||||||||| ||||||||| ||||||||| ||| | |||||    
43679446 gaaaacctcggtagttaactgccgaagaaaa-taattatacagacagtgggttttgcataattctaaagcatttccaaatcatttttt-ggctaattttt 43679543  T
516 acctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtcc 615  Q
    || ||||||||||||| |  |||| ||||||||| |||| ||||||||  ||||||||| | ||||||||||| ||||||||||||||||||||||||||    
43679544 acatgtaattaaaccaaaatatttccaaaggcaatataaatcatacaaaattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtcc 43679643  T
616 ataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatca 715  Q
    |||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
43679644 ataattaaatcaaaccgacatttggttcaaattacacaaaagtttaaaattcatcaaaacgttacaaagtgttcataattaaacaactcattacacatca 43679743  T
716 ttaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaa 815  Q
    ||      | |||||||| || |||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||    
43679744 tt------atattaaatccctgcttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaa 43679837  T
816 tccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    || |||||| ||||||||   |||||| ||||||||||| |||| |||||||||||||| ||||||||    
43679838 tctgacgtctctatcgtctttaataagtcaaggcatataacttgtcgttttccatgcgtgttcatctc 43679905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 2124260 - 2124703
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaat---taaaccagaccattttcaaagg 546  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||||| |||||| |||||||||| |||   ||||||||| ||||| ||||||    
2124260 attatgcagacagtgggttctgcataattctaatgcatttccaagccattttt-cggccactttttacctggaatatttaaaccagagcatttccaaagg 2124358  T
547 caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa 646  Q
    ||| |||| ||||||||| ||||||||| | ||||| ||||| ||||| ||||||||||||| ||||||||| |||||| |||||||||||||||| |||    
2124359 caatataaatcatacaacattgaaactcggtcataaccaagaaaaatataatatcttttacagttgtccatagttaaatcaaaccgacatttggttcaaa 2124458  T
647 ttacacaaacgtttgaaattcatcaaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaat 732  Q
    |||||||||| |||||||||||||||||| |||||              |||||||||| |||||||||||||||||||||||||      ||||||| |    
2124459 ttacacaaacatttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aaattaagt 2124552  T
733 ctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgt 832  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||| | |||||||| ||    
2124553 ccctacttacattcaacgcaattgcatatggaacgaaaatacatatataatatattatcttccaccatattccgaaacataaatccaaagtcgctattgt 2124652  T
833 cgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||    
2124653 cgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcgtctc 2124703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 578 - 883
Target Start/End: Complemental strand, 22588305 - 22588006
Alignment:
578 cataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacat 677  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||||| |    
22588305 cataaacaagaaaaatacaatatcttttacaattatccataattaaatcaaaccgacattaggttcaaattacacaaacgtttgaaattgatcaaaacgt 22588206  T
678 tacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacata 777  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||      || ||||||||||||||||||||||||||| |||||||||||||||    
22588205 tacaaagtgtccataattaaacaactcattacacatcattaaattaaa------tccctacttacattcaacgcaattgcatatagaacgaacatacata 22588112  T
778 tataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtatt 877  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||   ||| ||||||| |||||||||||||||||||||||||||||    
22588111 tataatatattatcttccaccatatttcaaaacataaatccgacgtcgctatcgtcttcaattagccaagacatatagcttgccgttttccatgcgtatt 22588012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 440 - 768
Target Start/End: Complemental strand, 20549259 - 20548938
Alignment:
440 gaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattt 539  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||||||| |||  || |||||| ||||||||||||||||||||||| |||||    
20549259 gaggaaaactgattatgcagacagcaagttctgcataattctaaacatttccaagccatcatt-cggccagtttttacctgtaattaaaccagagcattt 20549161  T
540 tcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg 639  Q
     ||||| |||||||||||||||||  ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
20549160 ccaaagacaaaataattcatacaagattgaaactcggatataaacaagataaatacaatatcttttacaattgttcataattaaattaaaccgaaatttg 20549061  T
640 gttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctact 739  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||      ||||||  ||||    
20549060 gttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaacaactcattacacatcattaaat------taaatccttact 20548967  T
740 tacattcaacgcaattgcatatggaacga 768  Q
    |||||||||||||||||||||||||||||    
20548966 tacattcaacgcaattgcatatggaacga 20548938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 453 - 860
Target Start/End: Complemental strand, 4867791 - 4867380
Alignment:
453 tatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaa 551  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |||||||| ||||| ||||||| ||||||||||| ||| ||||| ||||||||| |    
4867791 tatgcagacagtgggttttgcataattctaaagcatttccaagccatttttt-ggccagtttttacttgtaattaaactagagcatttccaaaggcaata 4867693  T
552 taattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaca 651  Q
    ||| ||||||||| || |||||||| ||||||||||| ||||||||||||||| || ||||||||||||||||| ||||| ||||||| || ||| ||||    
4867692 taactcatacaacatttaaactcagtcataaacaagaaaaatacaatatctttcaccattgtccataattaaatcaaaccaacatttgatttaaaataca 4867593  T
652 caaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaattaaatctctacttacattca 747  Q
    |||| ||||||||||||||||||||||||| ||| ||||| ||||||||||  ||||||  ||||||  |    | |||||||||| |||||||||||||    
4867592 caaaagtttgaaattcatcaaaacattacatagtctccataattaaacaacagattacaactcattacttatcattaaattaaatccctacttacattca 4867493  T
748 acgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaag 847  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||  ||||||||||||||||||| |||| || ||||||||||||     
4867492 acgcaattggatatggaacgaacatacgtatataatatattattttccaccataatccgaaacataaatccgacgtcgttatcatctcgaataagccaat 4867393  T
848 gcatatagcttgc 860  Q
    ||| |||| ||||    
4867392 gcacataggttgc 4867380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 590 - 883
Target Start/End: Complemental strand, 7172178 - 7171881
Alignment:
590 aaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtcc 689  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||| |||||||| ||||||||||||| ||||| ||||| |||||||    
7172178 aaatacaatatcttttacaattgtccataattaaatcaaacccacattttgttcaaaatacacaaaagtttgaaattcatgaaaacgttacatagtgtcc 7172079  T
690 atgattaaacaactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatat 785  Q
    || |||||||||| |||||||  ||| || |     | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
7172078 ataattaaacaacacattacaactcagtacacatcattaaattaaatctctacttacattcaatgcaattgcatatggaacgaacatacatatataatat 7171979  T
786 attatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
7171978 attattttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccattttccatgcgtattcatctc 7171881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 452 - 787
Target Start/End: Original strand, 39751144 - 39751473
Alignment:
452 ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    ||||||||||||||| ||||||||| || |||  ||||||||||  ||||||| ||||| |||||| || ||||||||||||| ||||| ||||| |||     
39751144 ttatgcagacagtggattctgcatatttataatgcatttccaagctatttttt-ggccagtttttaactataattaaaccagagcatttccaaagacaat 39751242  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||| ||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||| |||||| ||||||||| |||| ||||||||||| |||||||    
39751243 ataaatcatacaacattgaaactcggtcataaccaagaaaaatacaatatcttttacagttgtccgtaattaaatcaaactgacatttggttcaaattac 39751342  T
651 acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacg 750  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||      |||||||||| ||||||||||||||||    
39751343 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacg 39751436  T
751 caattgcatatggaacgaacatacatatataatatat 787  Q
     ||||||||||||||||||||||||||||||||||||    
39751437 taattgcatatggaacgaacatacatatataatatat 39751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 511 - 883
Target Start/End: Complemental strand, 22661504 - 22661138
Alignment:
511 tttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaat 610  Q
    ||||||||||||||| ||| ||| ||||| ||||||||  || | |  |||||| || | |||||| ||||||||||| ||||||| ||||||||||  |    
22661504 tttttacctgtaattcaactagagcatttccaaaggcattattagttgtacaacatttatactcagtcataaacaagaaaaatacattatcttttacggt 22661405  T
611 tgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattaca 710  Q
    ||||||||||||||| ||||||| |||| ||||||||||||| || |||||| |||||||||||||||| | ||||||||| |||||||||| |||||||    
22661404 tgtccataattaaatcaaaccgatatttcgttaaaattacacgaatgtttgagattcatcaaaacattaaagagtgtccataattaaacaacacattaca 22661305  T
711 catcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaac 810  Q
     ||| ||||||||||      |||||||| ||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||    
22661304 tatcgttaaattaaa------tctctactgacattctgcgcagttgcatatggaacgaacatacatatataatatatcatcttccaccatattccgaaac 22661211  T
811 ataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||| | |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||    
22661210 atagacccgacgtcgctatcgtcgtgaataagccaaggcatatggcttgccgttttccatgcatattcatctc 22661138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 394 - 671
Target Start/End: Original strand, 34366937 - 34367214
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttcca 492  Q
    |||| |||||||||||| |||| ||||| |||||||||||||||  || |||  |||||||||||| ||||| | ||||||| |||||||| ||||||||    
34366937 tccggctgcagttaacttccgaggaaaacctcggtagttaactgccgatgaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttcca 34367036  T
493 agtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaa 592  Q
    || | |||||||||||| ||||||||||||||||||||||| |||||  |||||||||| |||||||||| | ||||||||| |||||||||||||||||    
34367037 agcc-ttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacagcattgaaactcggacataaacaagataaa 34367135  T
593 tacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
34367136 tacaatatcttttacaattgtccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaattcatca 34367214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 429 - 666
Target Start/End: Original strand, 41743925 - 41744162
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  || ||| ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||||||||||    
41743925 agttaactgccgaagaaaactaattatgcagacagtgggttctgcataattttaaacatttccaagccattttttcggccagtttttacatgtaattaaa 41744024  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| ||||| |||||||||||||||| ||||||  |||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
41744025 ccagagcatttccaaaggcaaaataatttatacaagattgaaactcgaacataaacaagataaatacaatattttttacaattgtccatgattaaattaa 41744124  T
629 accgacatttggttaaaattacacaaacgtttgaaatt 666  Q
    |||||||||||||| |||||||||||||||||||||||    
41744125 accgacatttggttcaaattacacaaacgtttgaaatt 41744162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 724 - 883
Target Start/End: Original strand, 41744173 - 41744332
Alignment:
724 aaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgt 823  Q
    ||||||| || |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||  ||| |||||||||||||    
41744173 aaattaagtccctacttacattcaacgcaattgcatatggagcgaatatacatatataatatattatcttccaccatattccgaaatataaatccgacgt 41744272  T
824 cgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||  ||||||||||||||||||| |||| |||||||||||||||||||||||    
41744273 cgctatcgtcatgaataagccaaggcatataacttgtcgttttccatgcgtattcatctc 41744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 451 - 639
Target Start/End: Original strand, 23578517 - 23578705
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||| | |||| ||||||||||||||||||||||| ||||| |||||||||    
23578517 attatgcagacagtgggttctgcataattctaaagcatttccaaaccattttt-cagccagtttttacctgtaattaaaccagagcatttccaaaggcaa 23578615  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg 639  Q
     |||| | ||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||    
23578616 tataaattatacaacattgaaactctgtcataaacaagaaaaatacaatatcttttacaattgttcataattaaatcaaaccgacatttg 23578705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 452 - 670
Target Start/End: Original strand, 41238932 - 41239150
Alignment:
452 ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    ||||||| |||||  | ||||||| |||||||| ||| |||||| ||||||| | | || |||| ||||||||||||| |||| |||||  ||| |||||    
41238932 ttatgcaaacagtaagctctgcatgattctaaaacatgtccaagccattttt-cagtcagttttaacctgtaattaaagcagagcatttcgaaatgcaaa 41239030  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||| || |||||||    
41239031 ataattcatacaacattgaatctcggacataaacaagacaaatacaatatcttttacaattgttcataattaaatcaaaccgacatttgattcaaattac 41239130  T
651 acaaacgtttgaaattcatc 670  Q
    ||||||||||||||||||||    
41239131 acaaacgtttgaaattcatc 41239150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 535 - 802
Target Start/End: Complemental strand, 30972780 - 30972519
Alignment:
535 cattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgac 634  Q
    |||||||| |||||| | || ||||||| | || | |||||| ||||||||||| ||||||| ||||||||||  ||||| |||||||||| ||  | ||    
30972780 cattttcagaggcaatacaactcatacatcatttatactcagtcataaacaagaaaaatacattatcttttacggttgtcgataattaaatcaattcaac 30972681  T
635 atttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatct 734  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||| ||| | ||| |||||||||| ||||||||||||||      | || |||| |    
30972680 atttcgttaaaattacacgaatgtttgaaattcatcaaaacattacagagtatacataattaaacaacacattacacatcatt------acataaaatat 30972587  T
735 ctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatat 802  Q
    |||   |||||| |||||  |||| ||||||| |||| |||||||||||||||||||||| |||||||    
30972586 ctatcgacattctacgcatgtgcaaatggaacaaacacacatatataatatattatcttcaaccatat 30972519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 779 - 878
Target Start/End: Original strand, 39751659 - 39751758
Alignment:
779 ataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc 878  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
39751659 ataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagtttgccgttttccatgcgtattc 39751758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 429 - 551
Target Start/End: Complemental strand, 1116226 - 1116105
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  ||| || ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||  |||||||||||||||||    
1116226 agttaactgccgagaaaaactgattatgcagacagagggttctgcataattctaaacaattccaagccattttttcggcca-gttttacctgtaattaaa 1116128  T
529 ccagaccattttcaaaggcaaaa 551  Q
    ||||| ||||| |||||||||||    
1116127 ccagagcatttccaaaggcaaaa 1116105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 500 - 869
Target Start/End: Original strand, 31280942 - 31281305
Alignment:
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    |||||||||  ||||||||||||||| ||||||| ||||| || || ||| | || ||||||| | || | | || | |||||||||||  ||||||  |    
31280942 ttttcggcctatttttacctgtaattcaaccagagcatttccagagacaatacaactcatacaccatttataatcggtcataaacaagaacaatacataa 31281041  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaatt--acacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    ||||||||||||| |  ||||||||| || | ||||||| |||||||||  |||| || |||||||||||||||||| |||| | ||||      |||||    
31281042 tcttttacaattgactgtaattaaatcaatctgacatttcgttaaaattttacacgaatgtttgaaattcatcaaaatattaaagagtgcttgaaattaa 31281141  T
698 acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 797  Q
    ||||| ||||||| ||||||| || | |  |  |||       |||||| |||||  |||| |||||||||||||| | |||||||||||||||||| ||    
31281142 acaacacattacatatcattacataagatatttatca------acattctacgcacgtgcagatggaacgaacataaagatataatatattatcttcaac 31281235  T
798 catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcca 869  Q
    |||||||| |||||||||||| ||||  |||||||| |||||||||||| || ||||  | |||||||||||    
31281236 catattctgaaacataaatcctacgt--ctatcgtcacgaataagccaatgcttataaatcgccgttttcca 31281305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 447 - 587
Target Start/End: Complemental strand, 7172607 - 7172465
Alignment:
447 actgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggcca--ttttttacctgtaattaaaccagaccattttcaa 543  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| |  ||   |||||||| ||||||||||||||| |||||||||    
7172607 actgattatgcagacagtggcttctgcataattctaaagcatttccaagccgttttt-caacctgtttttttacttgtaattaaaccagagcattttcaa 7172509  T
544 aggcaaaataattcatacaacgttgaaactcagacataaacaag 587  Q
    |||||| |||| | ||||||| || ||||| || ||||||||||    
7172508 aggcaatataacttatacaacatttaaacttagtcataaacaag 7172465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 310 - 436
Target Start/End: Complemental strand, 44052358 - 44052231
Alignment:
310 gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa 408  Q
    ||||||||||||||||||||| | | | ||||| |||||||||| ||||||||| || | |||||||  | | ||||||||| | |||| |||||||||     
44052358 gttgttcccacattacataaggttgtggcacacgagtaaatgacgtttttgccccctcggtagttaattgccgaggaatttgcaatccggctgcagttac 44052259  T
409 ctgccgaagaaaatctcggtagttaact 436  Q
    || |||| ||||| ||||||||||||||    
44052258 ctaccgaggaaaacctcggtagttaact 44052231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 337 - 445
Target Start/End: Complemental strand, 35966853 - 35966745
Alignment:
337 cacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaact 436  Q
    ||||| ||||||  ||| |||||||| || |  ||||||| | | ||||||||||| ||||||||||||||| || ||||||||  ||||||||||||||    
35966853 cacactagtaaaatacaattttgccccctcggcagttaactgccgaggaatttgaaatccgactgcagttaattgtcgaagaaatcctcggtagttaact 35966754  T
437 gttgaggaa 445  Q
    || ||||||    
35966753 gtagaggaa 35966745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 492
Target Start/End: Complemental strand, 17924323 - 17924232
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttcca 492  Q
    |||||||||||||||  |||| |||||||||||||||  ||||||   |||||||||||||||  ||| ||||||||||||||  |||||||    
17924323 gcagttaactgccgagaaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggtcctgcataattctaagtatttcca 17924232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 41743877 - 41743943
Alignment:
355 ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaa 421  Q
    |||||||| || |||||||||| | | ||||||||||| |||| |||||||||||||||||||||||    
41743877 ttttgccccctcgatagttaactgccgaggaatttgaaatccggctgcagttaactgccgaagaaaa 41743943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 437
Target Start/End: Original strand, 39601649 - 39601773
Alignment:
314 ttcccacattacataag-ctcggccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgc 412  Q
    ||||||||||||||||| ||  ||||||| |||||||||| ||||| || ||| || ||||||| | | | |  || ||| |||| ||||||||||||||    
39601649 ttcccacattacataaggctgtgccacacgagtaaatgacgtttttaccttctcgacagttaactgccgaagttttagaaatccggctgcagttaactgc 39601748  T
413 cgaagaaaatctcggtagttaactg 437  Q
    ||| ||||| ||||| |||||||||    
39601749 cgaggaaaacctcgggagttaactg 39601773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 451 - 529
Target Start/End: Complemental strand, 22588389 - 22588311
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaac 529  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||| ||| |||||||| || |||||| ||||||| ||||    
22588389 attatgcagacagtgggttctgtataattctaaagcattttcaa-tcaatttttcggtcagtttttatctgtaatgaaac 22588311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 40077297 - 40077254
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
40077297 tccgactgcagttaactgccgaggaaaacctcggtagttaactg 40077254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 437
Target Start/End: Original strand, 1114760 - 1114812
Alignment:
385 aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||| |||| ||||||||||||||||| ||||  |||||||||||||||    
1114760 aatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactg 1114812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 22550912 - 22550869
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
22550912 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 22550869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 437
Target Start/End: Original strand, 41016444 - 41016483
Alignment:
398 actgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||||||||| ||||| |||||||||||||||    
41016444 actgcagttaactgccgaggaaaacctcggtagttaactg 41016483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 1116259 - 1116214
Alignment:
370 agttaaccgtcaaggaatttgaattccgactgcagttaactgccga 415  Q
    ||||||| ||| ||||||||||| |||| |||||||||||||||||    
1116259 agttaactgtcgaggaatttgaaatccggctgcagttaactgccga 1116214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 438
Target Start/End: Complemental strand, 39491177 - 39491140
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgt 438  Q
    ||||||||||||||| ||||||||||| ||||||||||    
39491177 gcagttaactgccgaggaaaatctcggaagttaactgt 39491140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 41855399 - 41855436
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaact 436  Q
    ||||||||||||||||| ||||| ||||||||||||||    
41855399 ctgcagttaactgccgaggaaaacctcggtagttaact 41855436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 42602492 - 42602529
Alignment:
400 tgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||||||| ||||| |||||||||||||||    
42602492 tgcagttaactgccgaggaaaacctcggtagttaactg 42602529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 333; Significance: 0; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 3408280 - 3407803
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| ||||||||| |  ||  |||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
3408280 gcagttaactgccgaggaaaacctcggtagtaacttgccgaggaaaactgattatgtagacagtgggttctgcataattctaaacatttccaagccattt 3408181  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    ||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| | ||||| |||||||||||||||||    
3408180 tttcggccagtttttacttgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggtcataatcaagataaatacaatat 3408081  T
601 cttttacaattgtccataattaaattaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac 699  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
3408080 cttttacaattgttcataattaaattaaaccgacattttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaac 3407981  T
700 aactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacca 799  Q
     |||||||||||||||||      |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
3407980 tactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacca 3407887  T
800 tattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||  ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
3407886 tattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgtgtattcatctc 3407803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 440 - 882
Target Start/End: Complemental strand, 37395218 - 37394768
Alignment:
440 gaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattt 539  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| |||||    
37395218 gaggaaaactgattatgcagacagtgggttctgcataattctaaacattttcaagccattttttcggccagtttttacctgtaattaaaccagagcattt 37395119  T
540 tcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg 639  Q
     |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
37395118 ccaaaggaaaaataattcatacaacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttg 37395019  T
640 gttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgt--------------ccatgattaaacaactcattacacatcattaaattaaa 725  Q
     || |||||||||||||||||||||||||||||||| |||||||||||              |||| |||||||||||||||||||||||||      ||    
37395018 attcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aa 37394925  T
726 attaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcg 825  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
37394924 attaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcg 37394825  T
826 ctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct 882  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
37394824 ctatcgtcgcgaataagccaaggcatacaacttgccgttttccatgcgtattcatct 37394768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 19069201 - 19069709
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||  |||||| |||||||||||||||||||||| |||||||||| |    
19069201 aggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattgt 19069299  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| |||||||||| ||| ||||||| ||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||    
19069300 aaacatttccaagccattttttcgaccagtttttacttgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata 19069399  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca------------- 668  Q
    |  ||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||                 
19069400 atgaagataagtaaaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaattaaacta 19069499  T
669 -tcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacg 767  Q
     ||||||||||||||||||||||| ||||||| ||||||| |||||||||      |||||||||| |||||||||||||||||||||||||||||||||    
19069500 ctcaaaacattacaaagtgtccataattaaactactcattgcacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacg 19069593  T
768 aacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttc 867  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||    
19069594 aacatacatgtataatatattatcttccaccatattccgaaacataaacccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttc 19069693  T
868 catgcgtattcatctc 883  Q
    ||||||||||||||||    
19069694 catgcgtattcatctc 19069709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 49563873 - 49564351
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| ||||||||||||| |  ||| ||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
49563873 gcagttaactgccgaggaaaacctcggtagttaacggccgagaaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 49563972  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
49563973 tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 49564072  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
49564073 atattttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 49564172  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||      |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
49564173 ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 49564266  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
49564267 atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 49564351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 403 - 883
Target Start/End: Complemental strand, 10423444 - 10422972
Alignment:
403 agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatttt 501  Q
    ||||||||||||| ||||  || ||||||||||||  |||||| ||  ||||||||||||||||||| ||||||| |||||| || ||||||| ||||||    
10423444 agttaactgccgaggaaatcctaggtagttaactgccgaggaaaaca-attatgcagacagtgggttttgcataaatctaaagcaattccaagccatttt 10423346  T
502 ttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatc 601  Q
    | |||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||| ||||    
10423345 t-cggccagtttttacctgtaattaaaccagagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaataca-tatc 10423248  T
602 ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaa 701  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||    
10423247 ttttacaattgtccataattaaattaaaccgacattaggttcaaattacacaaacgtttgaaattcatcaaaacgttacaatgtgtccataattaaacaa 10423148  T
702 ctcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccata 801  Q
    ||||||||| ||||||      | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
10423147 ctcattacatatcatt------agattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccata 10423054  T
802 ttctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||  |||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||| |||||| ||||    
10423053 ttccgaaacataaatccgacgtcgcaatcgccgcgaataagccaagacatatagcttgtcgttttccatgtgtattcgtctc 10422972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 38460457 - 38460934
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    ||||||||||||| ||| ||||| ||||||| |||||||  |||||| ||  ||||||||| |||||||||||||||||||||||| |||||||||| ||    
38460457 ctgcagttaactgtcgaggaaaacctcggtaattaactgccgaggaaaaca-attatgcagtcagtgggttctgcataattctaaagcatttccaagcca 38460555  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    ||||| ||| || ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||| ||    
38460556 ttttt-cggtcagtttttacctgtaattaaaccagagcattttcaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatataa 38460654  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||  ||||||||||||||| |||||    
38460655 tatcttttacaattgtccataattaaattaaaccgacatttgattcaaattacacaaaagtttgaaattcatcaaaatgttacaaagtgtccataattaa 38460754  T
698 acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 797  Q
    |||||||||||||||| |||      | |||||||| ||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||| ||||||    
38460755 acaactcattacacatgatt------atattaaatccctacttacattcatcacaattgcatatgcaacaaacatacatatataatatattattttccac 38460848  T
798 catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||| |||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||    
38460849 catattctgaaacataaatccaacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgcattcatctc 38460934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 399 - 877
Target Start/End: Complemental strand, 44051134 - 44050650
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    |||||||||||| |||| ||||  |||||||||||||||  |||||| ||  |||||||| ||||||||||||||||||||||||| |||||||||| ||    
44051134 ctgcagttaactcccgaggaaatcctcggtagttaactgccgaggaaaaca-attatgcaaacagtgggttctgcataattctaaagcatttccaagcca 44051036  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    ||||| |||||| ||||||| ||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||||    
44051035 ttttt-cggccagtttttacttgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaa 44050937  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgt---------- 687  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||              
44050936 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 44050837  T
688 ----ccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataat 783  Q
        |||| |||||||||||||||||||||||||      |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
44050836 gtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttgcattcaacgcaattgcatatggaacgaacatacatatataat 44050743  T
784 atattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtatt 877  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||    
44050742 atattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa-acatatagcttgttgttttccatgcgtatt 44050650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 451 - 883
Target Start/End: Complemental strand, 4774604 - 4774168
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||||| |||||||||||| | || |||||||||| ||||||| || | | ||||||||||||||| ||||||| ||||| ||||| |||    
4774604 attatgcagacagtggtttctgcataattgttaagcatttccaagccattttt-cgactagtttttacctgtaatttaaccagagcatttccaaagccaa 4774506  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| | ||||||| || |||||||| ||||| ||||  |||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||| ||    
4774505 tataacttatacaacatttaaactcagtcataagcaagtaaaatacaatatcatttacaattgtccataattaaatcaaatcgacatttggttcaaaata 4774406  T
650 cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----taaaattaaatctctacttacatt 745  Q
    |||||| ||||||||||||| ||| | ||||| ||||||||||  |||||||| |||||||  |||||| |     | |||||||||| ||||||||||     
4774405 cacaaaagtttgaaattcattaaatcgttacatagtgtccatgcataaacaacacattacaactcattacacatcattaaattaaatccctacttacatg 4774306  T
746 caacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagcca 845  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
4774305 caacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcaaataagcca 4774206  T
846 aggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    || |||||||||||||||||||||||||||||||||||    
4774205 agccatatagcttgccgttttccatgcgtattcatctc 4774168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 569 - 883
Target Start/End: Original strand, 10374240 - 10374548
Alignment:
569 aaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca 668  Q
    |||||| | ||||| ||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
10374240 aaactcggtcataaccaagaaaaatacaataccttttacagttgtccataattaaatgaaaccgacatttggttcaaattacacaaacgtttgaaattca 10374339  T
669 tcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacga 768  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||      || ||||||||||||||||||||||||||||||||||    
10374340 tcaaaacattacaaggtgtccataattaaacaactcattacacatcattaaattaaa------tccctacttacattcaacgcaattgcatatggaacga 10374433  T
769 acatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcc 868  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
10374434 acatacatatataatatattatcttccaccatatttcgaaacataaatctgatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcc 10374533  T
869 atgcgtattcatctc 883  Q
    |||||||||| ||||    
10374534 atgcgtattcgtctc 10374548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 452 - 883
Target Start/End: Original strand, 18578706 - 18579141
Alignment:
452 ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    ||||||||||||||| |||||||||||| | || |||||||||| ||||||| |||| | ||||||| ||||||| |||||||  |||| |||||||||     
18578706 ttatgcagacagtggattctgcataattgttaagcatttccaagccattttt-cggctagtttttacttgtaattcaaccagagtatttccaaaggcaat 18578804  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||| | ||||||| || |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||| || ||| |||    
18578805 ataacttatacaacatttaaactcactcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttgattcaaaatac 18578904  T
651 acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattc 746  Q
    ||||| ||||||||||||||||||  ||||| ||||||||| |||||||||| |||||||  |||||| |     | |||||||||| || |||||||||    
18578905 acaaaagtttgaaattcatcaaaatgttacatagtgtccataattaaacaacacattacaactcattacacatcattaaattaaatcacttcttacattc 18579004  T
747 aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa 846  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||   ||| ||||||    
18579005 aacgcaattgcatatagaactaacatacatatataatatattatcttctaccatattccgaaacataaattcgacgtcgctatcgtcttcaattagccaa 18579104  T
847 ggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||||||||||    
18579105 ggcatatagcttgccgttttccatgcgtattcatctc 18579141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 382 - 673
Target Start/End: Original strand, 15995736 - 15996026
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||  |||||| |||||||||||||||||||||| ||||||||||||    
15995736 aggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattct 15995834  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| || ||||||    
15995835 aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaagtcggacata 15995934  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaa 673  Q
    |  ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
15995935 atgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaa 15996026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 457 - 791
Target Start/End: Complemental strand, 50905147 - 50904819
Alignment:
457 cagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataat 555  Q
    ||||||||| |||||||||||||||||  |||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||  ||| |||| ||||     
50905147 cagacagtgagttctgcataattctaatgcatttccaagccattttt-cggccaatttttacctgtaattaaaccagagcatttctaaatgcaatataaa 50905049  T
556 tcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaa 655  Q
    ||||||||| |||||||||  |||||||||||| |||||  | ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
50905048 tcatacaacattgaaactcgaacataaacaagaaaaatatgaaatcttttacaattgtccataattaaatcaaaccgacattttgttcaaattacacaaa 50904949  T
656 cgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaatt 755  Q
    ||||||||||||||||||||  |||||||||| ||| ||||||||| ||||| |||||||||||||      |||||| ||||||||||||||| |||||    
50904948 cgtttgaaattcatcaaaacgatacaaagtgttcataattaaacaattcatttcacatcattaaat------taaatccctacttacattcaacacaatt 50904855  T
756 gcatatggaacgaacatacatatataatatattatc 791  Q
    ||||||||||| |||||||| |||||||||||||||    
50904854 gcatatggaacaaacatacaaatataatatattatc 50904819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 310 - 671
Target Start/End: Original strand, 51492013 - 51492374
Alignment:
310 gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa 408  Q
    ||||||||||||||||||||| | | ||||||| |||||||||| |||||||  ||| |  | ||||| ||| | |  || ||| |||| ||||||||||    
51492013 gttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgct-tctcggcaattaactgtcgaagttttagaaatccggctgcagttaa 51492111  T
409 ctgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggc 507  Q
    ||||| | ||||| |||||||||||||||  ||||||  |||||||||||| ||||| | ||||||| |||||||| |||||||||| | ||||||| ||    
51492112 ctgcctaggaaaacctcggtagttaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaagcc-ttttttcagc 51492210  T
508 cattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttac 607  Q
    ||  |||||||||||||||||||||| |||||  ||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||||||||||    
51492211 cagattttacctgtaattaaaccagagcatttcgaaaggcaaaataattcatacaacattaaaactcgaacataaacaagataagtacaatatcttttac 51492310  T
608 aattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
51492311 aattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 51492374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 602 - 883
Target Start/End: Original strand, 24415392 - 24415679
Alignment:
602 ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaa 701  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||    
24415392 ttttacaattgtccataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaa 24415491  T
702 ctcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 797  Q
    | |||||||  |||||| ||    | |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||     
24415492 cacattacaactcattacatatcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattattttccat 24415591  T
798 catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc--atatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||  |||||||||| | ||||||||||||||   |||||| ||||||  |||||||||| ||||||||||| |||||||||||    
24415592 catattccgaaacataaatgcaacgtcgctatcgtcttcaataagtcaaggcatatatagcttgtcgttttccatgtgtattcatctc 24415679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 401 - 671
Target Start/End: Original strand, 37015931 - 37016201
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatt 499  Q
    ||||||||||||||| |||||  ||||||||||||||   |||||  || |||||| || ||||| | ||||||| |||||||| ||||| |||||| ||    
37015931 gcagttaactgccgaggaaaacttcggtagttaactgcccaggaaatctaattatggaggcagtgagctctgcatcattctaaaacattttcaagtc-tt 37016029  T
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    ||||| |||| ||||||||||||||||||||||| |||||  |||||||||| |||||||||| | ||||||||| ||||||||||||||||||||||||    
37016030 ttttcagccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacatcattgaaactcggacataaacaagataaatacaata 37016129  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||||||||||||||||||||||| |||| ||| |||| || |||||||| |||||||||||||||||||    
37016130 tcttttacaattgtccataattaaatcaaactgacgtttgattcaaattacagaaacgtttgaaattcatca 37016201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 527 - 781
Target Start/End: Original strand, 51642165 - 51642423
Alignment:
527 aaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatt 626  Q
    ||||||| ||||||||||||||| |||| ||||||||  |||||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||     
51642165 aaccagagcattttcaaaggcaatataaatcatacaatattgaaactcgatcataaacaagaaaaatacaatatcttttacaattgtccataattaaatc 51642264  T
627 aaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaat----t 722  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||  |||||| ||    |    
51642265 aaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttacaaattgtccataattaaacaacacattacaactcattacatatcat 51642364  T
723 aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata 781  Q
     || ||||||| | ||||||||||| | ||||| ||||| |||||||||||||||||||    
51642365 taagttaaatcccaacttacattcatcacaattacatatagaacgaacatacatatata 51642423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 511 - 856
Target Start/End: Original strand, 6186789 - 6187140
Alignment:
511 tttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata--aacaagataaatacaatatcttttaca 608  Q
    ||||||||||||||| ||||| | ||||| | ||||||| |  | || |||||| || | |||||| ||||  ||||||| ||||||| ||||||||| |    
6186789 tttttacctgtaattcaaccaaagcatttccgaaggcaatactagtcgtacaacatttatactcagtcatataaacaagaaaaatacattatcttttata 6186888  T
609 attgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcatta 708  Q
     | ||| |||||||||| || ||||||||| |||||||||||||  | ||||||||||||||||||||||| |  |||||||| |||||||||| |||||    
6186889 gtagtcaataattaaatcaatccgacatttcgttaaaattacacgtatgtttgaaattcatcaaaacattaaagggtgtccataattaaacaacacatta 6186988  T
709 ca-catcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatt 803  Q
    || ||| |||| ||    | |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
6186989 caacat-attacatatcattaaattaaatctctactgacattctacgcatttgcatatggaacgaacatacatatataatatattatcttccaccatatt 6187087  T
804 ctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagc 856  Q
       |||||||||||| | ||||||||||||| |||||||||||| || |||||    
6187088 gctaaacataaatccaatgtcgctatcgtcgtgaataagccaagacacatagc 6187140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 429 - 671
Target Start/End: Complemental strand, 50278836 - 50278593
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaac-atttccaagtcattttttcggccattttttacctgtaattaa 527  Q
    |||||||||  |||||| ||  ||||||||||||||| | ||||||| ||||||||  |||| |||| ||||||||||  || |||||||||||||||||    
50278836 agttaactgccgaggaaaacaaattatgcagacagtgagctctgcatgattctaaaatattttcaagccattttttcgatcagtttttacctgtaattaa 50278737  T
528 accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta 627  Q
    | |||| |||||  ||||||||||||||  ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||||||| |    
50278736 aacagagcatttcgaaaggcaaaataatctatacaacattgaaactcggacataaacaagaaaaatacaatatcttttacaattattcataattaaatca 50278637  T
628 aaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
50278636 aaccgacatttggttgaaattacacaaacgtttgaaattcatca 50278593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 429 - 671
Target Start/End: Original strand, 44674199 - 44674440
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa 527  Q
    |||||||||  ||||||  |||||||||||| ||||| | ||||||| |||||||| |||||||||| | |||||| ||||| ||||  |||||||||||    
44674199 agttaactgccgaggaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaagccttttttt-ggccagttttc-cctgtaattaa 44674296  T
528 accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta 627  Q
    | |||| |||||  |||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |    
44674297 atcagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataagtacaatatcttttacaattgtccataattaaatca 44674396  T
628 aaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||    
44674397 aaccgacatttggttcaaattacacaaacatttaaaattcatca 44674440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 726 - 883
Target Start/End: Complemental strand, 11506815 - 11506658
Alignment:
726 attaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcg 825  Q
    ||||||||  |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||    
11506815 attaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaacataaatccgacgtcg 11506716  T
826 ctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||| |||   |||||| ||||||||||||||||||||||||||||||||||||||||    
11506715 ctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctc 11506658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 500 - 848
Target Start/End: Complemental strand, 30043373 - 30043022
Alignment:
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    |||||| ||| ||||||| || |||| ||||||| |||||  | |||||| |  |||| |||||| || | ||| || ||||||||||| ||||  | ||    
30043373 ttttcgaccagtttttacatgaaattcaaccagagcatttcaagaggcaatactattcgtacaacatttatactaagtcataaacaagaaaaatgtatta 30043274  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac 699  Q
    |||||||||||| ||||||||||||| || ||||| |   |||||||||||||  | |||||||||| |||||||||||| | |||| |||| |||||||    
30043273 tcttttacaattatccataattaaatcaatccgacgtagagttaaaattacacggatgtttgaaatttatcaaaacattaaagagtg-ccataattaaac 30043175  T
700 aactcattacacatcattaaat----taaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttcc 795  Q
    ||| || ||||   ||||| ||    | |||| ||||||||  | |||||| | | | ||||| |||||||||| ||||| |||||||||||||||||||    
30043174 aacacactacaacacattacatatcgttaaatgaaatctctggtgacattctatgaagttgcaaatggaacgaaaatacaaatataatatattatcttcc 30043075  T
796 accatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaagg 848  Q
    |||||||||| ||||||||||||||||||  ||||| |  |||||||||||||    
30043074 accatattctgaaacataaatccgacgtcattatcgccctgaataagccaagg 30043022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 400 - 606
Target Start/End: Original strand, 24414867 - 24415072
Alignment:
400 tgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcat 498  Q
    ||||||||||||| ||  |||| ||||||||||||| |||| |||| ||  |||||||||||||||||||||||||||||||||| |||||||||| |||    
24414867 tgcagttaactgctgagtaaaacctcggtagttaacggttggggaaaaca-attatgcagacagtgggttctgcataattctaaagcatttccaagccat 24414965  T
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat 598  Q
    || | ||| || ||||||||||||||||||||||| ||||| |||||  || |||| ||| | ||| || |||||||  ||||| ||||| |||||||||    
24414966 ttat-cggacagtttttacctgtaattaaaccagaacatttccaaagataatataactcagaaaacatttaaactcaatcataagcaagaaaaatacaat 24415064  T
599 atctttta 606  Q
    || |||||    
24415065 atttttta 24415072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 1041949 - 1042004
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||    
1041949 aggaattagaaatccgactgcagttaactgccgagaaaaatctcggtagttaactg 1042004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 9890008 - 9890063
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||    
9890008 aggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactg 9890063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 437
Target Start/End: Original strand, 33383774 - 33383874
Alignment:
337 cacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaact 436  Q
    ||||| ||||||  ||||||||||| ||| | |||||||  ||| |||| ||| ||  ||||||||||||||||||||| ||||| ||||| ||||||||    
33383774 cacacaagtaaaatacatttttgccttctcggtagttaattgtcgaggattttaaaaaccgactgcagttaactgccgaggaaaacctcggaagttaact 33383873  T
437 g 437  Q
    |    
33383874 g 33383874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 55407840 - 55407797
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| |||||||||||||||||||||    
55407840 tccggctgcagttaactgccgaggaaaatctcggtagttaactg 55407797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 19073713 - 19073659
Alignment:
383 ggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||| |||| ||||||||||||||||| ||||  |||||||||||||||    
19073713 ggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactg 19073659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 28081484 - 28081534
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgagga 444  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| |||||    
28081484 tccgactgcagttaactgccgaggaaaatctcgttagttaagtgtcgagga 28081534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 15999855 - 15999803
Alignment:
385 aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||| |||| ||||| ||||||||||| ||||| |||||||||||||||    
15999855 aatttgaaatccggctgcaattaactgccgaggaaaacctcggtagttaactg 15999803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 21018067 - 21018103
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||||||| |||||||||||||||    
21018067 gcagttaactgccgaagaaaacctcggtagttaactg 21018103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 26792284 - 26792248
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||| |||||||||||||||||||||    
26792284 gcagttaactgccgaggaaaatctcggtagttaactg 26792248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 40354638 - 40354674
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||||||| |||||||||||||||    
40354638 gcagttaactgccgaagaaaacctcggtagttaactg 40354674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 6178157 - 6178114
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
6178157 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 6178114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 49094110 - 49094153
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
49094110 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 49094153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 355 - 445
Target Start/End: Original strand, 8109378 - 8109468
Alignment:
355 ttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaa 445  Q
    |||| ||| |||| |||||||| ||| |||||||  |  |||| || |||||||||||||| ||||| ||||| ||||||||| |||||||    
8109378 ttttacccccttggtagttaactgtcgaggaattaaatatccggctacagttaactgccgaggaaaacctcgggagttaactgctgaggaa 8109468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 382 - 420
Target Start/End: Complemental strand, 9491318 - 9491280
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaa 420  Q
    ||||||||||| |||| ||||||||||||||||||||||    
9491318 aggaatttgaaatccggctgcagttaactgccgaagaaa 9491280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 11494574 - 11494612
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| ||||| |||||||||||||||    
11494574 ctgcagttaactgccgaggaaaacctcggtagttaactg 11494612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 20208541 - 20208579
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| ||||| |||||||||||||||    
20208541 ctgcagttaactgccgaggaaaacctcggtagttaactg 20208579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 21022930 - 21022892
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| ||||| |||||||||||||||    
21022930 ctgcagttaactgccgaggaaaacctcggtagttaactg 21022892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 337 - 415
Target Start/End: Original strand, 39588061 - 39588139
Alignment:
337 cacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccga 415  Q
    ||||| |||||||||| ||||||||| || |  ||||||| | | ||||||| ||| | ||||||||||||||||||||    
39588061 cacacgagtaaatgacgtttttgccccctcggcagttaactgccgaggaattagaaattcgactgcagttaactgccga 39588139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 39590610 - 39590572
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| ||||| |||||||||||||||    
39590610 ctgcagttaactgccgaggaaaacctcggtagttaactg 39590572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 44561372 - 44561334
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||| |||| |||||||||||||||||||||    
44561372 ctgcagttaactaccgaggaaaatctcggtagttaactg 44561334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 958635 - 958598
Alignment:
400 tgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||||||||| ||||| |||||||||||||||    
958635 tgcagttaactgccgaggaaaacctcggtagttaactg 958598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 44674106 - 44674159
Alignment:
310 gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccc 362  Q
    ||||||||||||||||||||| | | ||||||| |||||||||| |||||||||    
44674106 gttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 44674159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 327; Significance: 0; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 394 - 883
Target Start/End: Original strand, 48246438 - 48246920
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaa 493  Q
    |||| ||||||||||||| ||| ||||| |||||||||||||||  |||||| |||| |||||||||||||| ||  ||||||||||||||||||| |||    
48246438 tccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaaactgtttatgcagacagtgtgtg-tgcataattctaaacattttcaa 48246536  T
494 gtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaat 593  Q
    | ||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||    
48246537 gccatttttccggtcagtttttacctgtaattaaaccagagcattttcaaaggcaaaataattcataaaacattgaaactcagacataagcaatataaat 48246636  T
594 acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatga 693  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |    
48246637 acaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacttttgaaattcatcaaaaaattacaaagtgtccataa 48246736  T
694 ttaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 793  Q
    ||||||||||||||||||||||||      |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
48246737 ttaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcagttgcatatggaacaaacatacatatataatatattatctt 48246830  T
794 ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||  ||||||||||| ||||||||  |||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
48246831 ccaccatattccgaaacataaatctgacgtcgccgtcgtcgcgaataagccaaagcatatagcttgtcgttttccatgcgtattcatctc 48246920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 4002564 - 4002055
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||| ||||||||||||||||| ||||| ||||| |||||||||  |||||| |||||||||||||||||   |||||||||||||||    
4002564 aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcagacagcaagttctgcataattct 4002465  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||    
4002464 aaacatttccaagccattttttcggcaagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata 4002365  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca 681  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
4002364 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca 4002265  T
682 aag--------------tgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacg 767  Q
    |||              ||||||| |||||| ||||||||||||||||||      |||||||||| ||||||||||||||| |||||||||||||||||    
4002264 aagtgtctataactaagtgtccataattaaataactcattacacatcatt------aaattaaatccctacttacattcaacacaattgcatatggaacg 4002171  T
768 aacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttc 867  Q
    ||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||  ||||||||||||||| ||||||||||||||| |||||||    
4002170 aacatacatatataatatattattttccaccattttccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgtcgttttc 4002071  T
868 catgcgtattcatctc 883  Q
    ||||||||||||||||    
4002070 catgcgtattcatctc 4002055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 13743328 - 13743775
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  |||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
13743328 agttaactgccgaggaaaactgattatgtagacagtgggttctgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaa 13743427  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    | ||| ||||| |||||||||||||||||||||||  ||||||||| ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||    
13743428 ctagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatcaagataagtacaatatcttttacaattgttcataattaaattaa 13743527  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt 728  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||    
13743528 accgacatttggtt-aaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaatt 13743620  T
729 aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgcta 828  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||      
13743621 aaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccg 13743720  T
829 tcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
13743721 tcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 13743775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 304; E-Value: 1e-170
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 6745366 - 6744890
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||| | ||||| |||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
6745366 gcagttaactgccaaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 6745267  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| || |||||||||||||  ||||||||| |||||||  ||||||||||||||||    
6745266 tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagataaatacaatat 6745167  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca 700  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||     
6745166 cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaact 6745067  T
701 actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 800  Q
    |||||||||||||||||||||      |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
6745066 actcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 6744973  T
801 attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||||| ||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
6744972 attccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctc 6744890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 448 - 883
Target Start/End: Original strand, 9426685 - 9427114
Alignment:
448 ctgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaagg 546  Q
    ||||||||||||| ||||||| |||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||    
9426685 ctgattatgcagatagtgggt-ctgcataattataaagcatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaagg 9426783  T
547 caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa 646  Q
    |||||||||||||||||  ||||||||| |||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
9426784 caaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaa 9426883  T
647 ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc 746  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||||||| ||||||||||||    
9426884 ttaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattc 9426977  T
747 aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa 846  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||| ||    
9426978 aacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa 9427077  T
847 ggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||| |||||||||||||||||||||||||||    
9427078 ggcatatagtttgccgttttccatgcgtattcatctc 9427114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 30943222 - 30943700
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
30943222 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 30943321  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||| | || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
30943322 tttcggccagtttttacctgtaattaaaccagagcatttccaaaagtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 30943421  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
30943422 atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 30943521  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||      |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
30943522 ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 30943615  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
30943616 atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 30943700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 8156541 - 8157018
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| ||||| |||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
8156541 gcagttaactgccgaggaaaacctcggcagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 8156640  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||  |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
8156641 tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 8156739  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
8156740 atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 8156839  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||      |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
8156840 ctactcattacacatcatt------aaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 8156933  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
8156934 atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 8157018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 36812850 - 36813360
Alignment:
382 aggaatttgaat-tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattc 480  Q
    |||||||||||  |||| |||||||||||| |||| ||||| ||||||||| |||||  |||||| ||||||| |||||||||    |||||||||||||    
36812850 aggaatttgaaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgaggaaaactgattgtgcagacagcaaattctgcataattc 36812949  T
481 taaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat 580  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||| |||||||  ||||||||| |||||    
36812950 taaacatttccaagccattttttcggccagtttttacctgtagttaaaccagagcatttccaaaggcaaaataatccatacaagattgaaactcggacat 36813049  T
581 aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattac 680  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
36813050 aaacaagataaatacaatatcttatacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcattaaaacattac 36813149  T
681 aaag--------------tgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaac 766  Q
    ||||              ||||||| |||||||||||||||||||||||||      |||||| ||| ||||||||||||||||||||||||||||||||    
36813150 aaagtttccataattaattgtccataattaaacaactcattacacatcatt------aaattatatccctacttacattcaacgcaattgcatatggaac 36813243  T
767 gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt 866  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||    
36813244 gaacatacatatataatatattatattccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgtttt 36813343  T
867 ccatgcgtattcatctc 883  Q
    |||  ||||||||||||    
36813344 ccacacgtattcatctc 36813360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 448 - 883
Target Start/End: Complemental strand, 2857975 - 2857546
Alignment:
448 ctgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaagg 546  Q
    |||||||||||||||||| || |||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||    
2857975 ctgattatgcagacagtgagt-ctgcataattgtaaagcatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaagg 2857877  T
547 caaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa 646  Q
    |||||||||||||||||  ||||||||  |||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
2857876 caaaataattcatacaagattgaaacttggacataatgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaa 2857777  T
647 ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc 746  Q
    ||| ||||||||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||      |||||| ||||||||||||    
2857776 ttaaacaaacgtttgaaattcatcttaacattacaaagtgtccataattaaactactcattacacatcattaaat------taaatccctacttacattc 2857683  T
747 aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa 846  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||  ||||||||||||||| ||    
2857682 aacgcaattacatatggaatgaacatacatatataatatattattttccaccattttccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa 2857583  T
847 ggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||||||||||    
2857582 ggcatatagcttgccgttttccatgcgtattcatctc 2857546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 470 - 883
Target Start/End: Original strand, 46989614 - 46990035
Alignment:
470 ctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttga 569  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |  ||||||||||||||||||||||||||||   |||    
46989614 ctgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaaccaaagtattttcaaaggcaaaataattcatacaaatgtga 46989713  T
570 aactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat 669  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
46989714 aactcggacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacatttgaaattcat 46989813  T
670 caaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaatt 755  Q
    |||||| |||||              |||||||||| |||||||||||||||||||||||||      |||||||||| ||||||||||||||| |||||    
46989814 caaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacacaatt 46989907  T
756 gcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatag 855  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
46989908 gcatgtggaacgaacatacatatataatatattatcttccaccatattccaaaacataaatccgacgtcgtcatcgtcgcgaataagccaaggcatatag 46990007  T
856 cttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||||||||||||    
46990008 cttgccgttttccatgcgtattcatctc 46990035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 3953255 - 3952778
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| ||||| |||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
3953255 gcagttaactgccgaggaaaacctcgggagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 3953156  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    || |||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
3953155 tt-cggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 3953057  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| ||||||    
3953056 atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaatagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 3952957  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||||||      |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
3952956 ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 3952863  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
3952862 atattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3952778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 429 - 883
Target Start/End: Complemental strand, 50957704 - 50957243
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  |||||| |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||    
50957704 agttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattttaaacatttccaagccattttttcggccagtttttacctgtaattaaa 50957606  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
     |||| ||||| |||||||||||||||||||||||  ||||||||| |||||||  ||||||| ||||||||||||||||||||| ||||||||||||||    
50957605 tcagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaa 50957506  T
629 accgacatttggttaaaattacacaaacgtttgaaattcat--------------caaaacattacaaagtgtccatgattaaacaactcattacacatc 714  Q
    || |||||||||||||||||| |||||||||||||||||||              ||||||||| |||||||||||| ||||||| ||||||||||||||    
50957505 acagacatttggttaaaattaaacaaacgtttgaaattcatcaaattaaactactcaaaacattccaaagtgtccataattaaactactcattacacatc 50957406  T
715 attaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataa 814  Q
    |||      |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||    
50957405 att------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacaaaa 50957312  T
815 atccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
50957311 atccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctc 50957243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 6489360 - 6489852
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    ||||||||||||||||| ||||  |||||||||||||||  |||||| ||  |||||||||||||||||||||||||||||||||| |||||||||| ||    
6489360 ctgcagttaactgccgaggaaatcctcggtagttaactgccgaggaaaaca-attatgcagacagtgggttctgcataattctaaagcatttccaagcca 6489458  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    |||| ||||||| ||||||||  ||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| |||||||     
6489459 tttt-tcggccagtttttaccgctaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacat 6489557  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca---------------a 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  |||| |||||               |    
6489558 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcattgaaacgttacaaaagtgtccatactta 6489657  T
683 agtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataa 782  Q
    ||||||||| |||||||||||||||||||||||||      |||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
6489658 agtgtccataattaaacaactcattacacatcatt------aaattaaattcctacttacattcaacacaattgcatatggaacgaacatacatatataa 6489751  T
783 tatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatct 882  Q
    ||||||||||||||||||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
6489752 tatattatcttccaccatattccgaaatataaatccgacgacgctatcgtcacgaataagccaaggcatatagcttgccgttttccatgcgtattcgtct 6489851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 451 - 880
Target Start/End: Original strand, 21951882 - 21952305
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||  ||||||||| ||||||||| || ||||||| |||||| ||||||| |||| || ||||||||||||||| ||||| |||| ||||    
21951882 attatgcagacagcaggttctgcagaattctaaaacaattccaagccatttt-tcggccagttttgacttgtaattaaaccagagcatttccaaatgcaa 21951980  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| ||||||||| |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
21951981 tataaatcatacaacattgaaactcgaacataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttgattaaaatta 21952080  T
650 cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac 749  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||      |||||||||| ||| ||||||||||     
21952081 cacaaacgtttgaaattcatcaaaacgttacaatgtgtccatgattaaacaactcattacacgtcatt------aaattaaatccctagttacattcaat 21952174  T
750 gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc 849  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||    
21952175 gcaattgcatatggaacgaacatacaaatataatatatcatcttccaccatattccgaaacctaaatccgacgtcgctatcatcgcgaataagccaaggc 21952274  T
850 atatagcttgccgttttccatgcgtattcat 880  Q
    | |||||||||||||||||||||||||||||    
21952275 acatagcttgccgttttccatgcgtattcat 21952305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 425 - 883
Target Start/End: Complemental strand, 14403012 - 14402569
Alignment:
425 cggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaat 524  Q
    |||||||||||||  |||||| |||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||    
14403012 cggtagttaactgccgaggaaaactgattatgca-acagtgagttctgcataattctaaacatttccaaaccattttttcggccagtttttacctgtaat 14402914  T
525 taaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaa 624  Q
    ||||||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
14402913 taaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaa 14402814  T
625 ttaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtc--------------catgattaaacaactcattaca 710  Q
    |||||                      |||||||||||||||||| ||||||||||||||||||              ||| ||||||||||||||||||    
14402813 ttaaa----------------------caaacgtttgaaattcatgaaaacattacaaagtgtctataattaagtgtccataattaaacaactcattaca 14402736  T
711 catcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaac 810  Q
    | |||||      |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||    
14402735 cgtcatt------aaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattattttccaccatattccgaaac 14402642  T
811 ataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
14402641 ataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 14402569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 431 - 753
Target Start/End: Original strand, 7841158 - 7841474
Alignment:
431 ttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaacc 530  Q
    |||||||  |||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
7841158 ttaactgccgaggaaaactgattatgcaaacagtgggttatgcataattctaaacatttccaagccattttttcgaccagtttttacctgtaattaaacc 7841257  T
531 agaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaac 630  Q
    ||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
7841258 agagcatttccaaaggcaaaataattcatacaacattgaaactcagacataaacaagataaatacagtatcttttacaattgtccataagtaaattaaac 7841357  T
631 cgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaa 730  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||      |||||||    
7841358 cgacatttggttaaaattacacaaacgtttaaaattcatcaaaacgttacaaagtgtccataattaaacaactcattgcacatcatt------aaattaa 7841451  T
731 atctctacttacattcaacgcaa 753  Q
    ||| |||||||||||||||||||    
7841452 atccctacttacattcaacgcaa 7841474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 447 - 883
Target Start/End: Original strand, 66952 - 67392
Alignment:
447 actgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaag 545  Q
    ||||||||||||||||||||||||||||||||| | || |||||||||| ||||||| ||| || ||||||||||||||||||||||| || |  ||||     
66952 actgattatgcagacagtgggttctgcataattgttaagcatttccaagccattttt-cggtcagtttttacctgtaattaaaccagagcaatcccaaat 67050  T
546 gcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaa 645  Q
    |||| |||||||||||||| || |||||||   |||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
67051 gcaatataattcatacaacatttaaactcacttataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaa 67150  T
646 attacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctactta 741  Q
    | |||||||| |||||||||||||||||||  |||| ||||||||| |||||||||| |||||||  |||||| |     | |||| ||||| |||||||    
67151 actacacaaaagtttgaaattcatcaaaacggtacatagtgtccataattaaacaacacattacaactcattacacatcattaaatgaaatccctactta 67250  T
742 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataa 841  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||||| |||   |||||    
67251 cattcaacgcaatcacatatggaacgaacatacatatataatgtattattttccaccatattccgaaacataaatccgacgtcgctattgtctttaataa 67350  T
842 gccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
67351 gccaagacatatagcttgccgtttttcatgcgtattcatctc 67392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 605 - 883
Target Start/End: Original strand, 2743678 - 2743964
Alignment:
605 tacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaa--------------acattacaaagtgtcca 690  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||              |||||||||||||| ||    
2743678 tacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaattaaactactcaaaacattacaaagtgttca 2743777  T
691 tgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattat 790  Q
    | ||||||| |||||||||||||||||||||||||      || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
2743778 taattaaactactcattacacatcattaaattaaa------tccctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatattat 2743871  T
791 cttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
2743872 cttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 2743964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 401 - 671
Target Start/End: Complemental strand, 600584 - 600314
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatt 499  Q
    ||||||||||| ||| ||||| |||||||||||||||  ||||||  ||||| |||||| ||||| | ||||||| |||||||| |||||||||| ||||    
600584 gcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaatctgatcatgcaggcagtgagctctgcatgattctaaaacatttccaagccatt 600485  T
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    ||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||    
600484 ttt-cggccaatttttacctgtaattaaaccagagcatttttaaaggcaaaataattcatacaacattgaaactcggacataaacaagaaaaatacaata 600386  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
600385 tcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 600314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 401 - 671
Target Start/End: Complemental strand, 42166450 - 42166182
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatt 499  Q
    ||||| ||||||||| |||||  ||||||||||||||  ||||||   |||||  |||| ||||| | ||||||| |||||||| |||||||||| | ||    
42166450 gcagtaaactgccgaggaaaacttcggtagttaactgccgaggaaatttgatt--gcaggcagtgagctctgcatcattctaaaacatttccaagcc-tt 42166354  T
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
42166353 ttttcggccagtttttacctgtaattaaaccagagcattttgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaata 42166254  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||| ||||    
42166253 tcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacactaatgtttgaaatttatca 42166182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 469 - 671
Target Start/End: Complemental strand, 36134255 - 36134053
Alignment:
469 tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt 567  Q
    ||||||| |||||||| |||||||||| | |||||||||||| |||||||||||||||||| |||| |||||  ||||||||||||||||||||||| ||    
36134255 tctgcatcattctaaaacatttccaag-ctttttttcggccagtttttacctgtaattaaatcagagcatttcgaaaggcaaaataattcatacaacatt 36134157  T
568 gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc 667  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
36134156 gaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattc 36134057  T
668 atca 671  Q
    ||||    
36134056 atca 36134053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 382 - 671
Target Start/End: Original strand, 50213471 - 50213760
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||| ||| || ||||||| |||||||||||  ||||  ||| ||||| | ||  |||||| ||  |||||| |||||||| | ||||||| |||||    
50213471 aggaattagaaatctgactgcacttaactgccgagaaaaacttcgatagttcattgccgaggaaaacaaattatggagacagtgagctctgcatgattct 50213570  T
482 aaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat 580  Q
    ||| |||||| |||  ||||| ||||||| |||||||||||||||||| |||| |||||  ||||||||||||||||||||||| ||||||||| |||||    
50213571 aaaacatttctaagctatttt-tcggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcggacat 50213669  T
581 aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
50213670 aaacaagaaaaatgcaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 50213760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 403 - 671
Target Start/End: Original strand, 47070503 - 47070771
Alignment:
403 agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatttt 501  Q
    |||||||| |||| |||||  || |||||||||||  ||| ||  |||||||||||| ||||| | ||| ||| |||||||| |||||||||| ||||||    
47070503 agttaacttccgaggaaaacatccgtagttaactgccgagaaaatctgattatgcagtcagtgagctctacatgattctaaaacatttccaagccatttt 47070602  T
502 ttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatc 601  Q
    | |||| | ||||||||||||||||||||||| |||||  |||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||    
47070603 t-cggctagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcgaacataaacaagataaatacaatatc 47070701  T
602 ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||    
47070702 ttttccaattgtccataattaaatcaaaccgacgtttggttcaaattacacaaacgtttgaaattcatca 47070771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 429 - 671
Target Start/End: Complemental strand, 16647185 - 16646944
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa 527  Q
    |||||||||  ||||||  || ||||||||| ||||| | ||||||| |||||||| |||||||||| ||||||  |||||| |||||| ||||||||||    
16647185 agttaactgccgaggaaatctaattatgcaggcagtgagctctgcatgattctaaaacatttccaagccattttc-cggccaatttttatctgtaattaa 16647087  T
528 accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta 627  Q
    |||||| |||||  |||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||| |    
16647086 accagagcatttcgaaaggcaaaacaattcatacaacattgaaactcagacataaa-aagataaatataatatcttttacgattgtccataattaaatca 16646988  T
628 aaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
16646987 aaccgacatttggtttaaattacacaaacgtttgaaattcatca 16646944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 403 - 666
Target Start/End: Original strand, 52387833 - 52388097
Alignment:
403 agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgatt--atgcagacagtgggttctgcataattctaaa-catttccaagtcatt 499  Q
    ||||||||||||| |||||  ||||||||||||||  ||||||  ||||||  | ||||  |||| | ||||||| |||||||| |||||||||| | ||    
52387833 agttaactgccgacgaaaacttcggtagttaactgccgaggaaatctgattgcaggcagt-agtgagctctgcatcattctaaaacatttccaagcc-tt 52387930  T
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    |||||||||| ||||||||||||||||||||||| |||||  |||||||||  |||||||||||| ||||||||| ||||||||||| ||||||||||||    
52387931 ttttcggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaccaattcatacaacattgaaactcggacataaacaatataaatacaata 52388030  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaatt 666  Q
    ||||||||||||| |||||||||||| |||||||||||| ||| |||||||||||||||||||||||    
52388031 tcttttacaattgaccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaatt 52388097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 469 - 669
Target Start/End: Complemental strand, 9473921 - 9473721
Alignment:
469 tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt 567  Q
    ||||||| |||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||| |||||  |||||||||| |||||||||||| ||    
9473921 tctgcatcattctaaaacatttccaagcc-ttttttcggccagtttttacctgtaattaaaccagatcatttcgaaaggcaaaacaattcatacaacatt 9473823  T
568 gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc 667  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||||| || |||||||||||||||||||||    
9473822 gaaactcggacataaacaatataaatacaatatctattacaattatccataattaaatcaaaccgacatttggttcaagttacacaaacgtttgaaattc 9473723  T
668 at 669  Q
    ||    
9473722 at 9473721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 407 - 671
Target Start/End: Original strand, 2271395 - 2271658
Alignment:
407 aactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcg 505  Q
    ||||||||| ||||| ||||| |||||||||  ||||||  ||||||  |||| ||||| | |||  || |||||||| ||||| |||| | ||||||||    
2271395 aactgccgaggaaaacctcgggagttaactgccgaggaaatctgatt--gcaggcagtgagctcttgatcattctaaaacattttcaagcc-ttttttcg 2271491  T
506 gccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaa-tacaatatcttt 604  Q
    |||| ||||||||||||||||||||||| |||||  |||||||||| |||||||||||| ||||||||  ||||||||||||||||| ||||||||||||    
2271492 gccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaacttggacataaacaagataaaatacaatatcttt 2271591  T
605 tacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||    
2271592 tacaattgtccataattaaatcaaaccgacatttggttcaaattagacaaacgtttaaaattcatca 2271658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 382 - 582
Target Start/End: Original strand, 2743412 - 2743611
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| |||| ||||||||||||||||| ||||| ||||| |||||||||  |||||| |||||||||||||||||||||| |||||||| | |    
2743412 aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataaatgt 2743510  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||| ||| |||||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||    
2743511 aaacatttcgaagccattttttcggccagtttttacttgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata 2743610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 407 - 582
Target Start/End: Original strand, 4004885 - 4005058
Alignment:
407 aactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcg 505  Q
    ||||| ||| ||||| |||||||||||||||  ||||||  ||||||  |||| ||||| | ||||||| |||||||| |||||||||| ||||||||||    
4004885 aactgtcgaggaaaacctcggtagttaactgccgaggaaatctgatt--gcaggcagtgagctctgcatcattctaaaacatttccaag-cattttttcg 4004981  T
506 gccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataa 582  Q
    |||| ||||||| ||||||||||||||| |||||  |||||||||| |||||||||||| ||||||||| |||||||    
4004982 gccagtttttacatgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataa 4005058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 48251001 - 48250873
Alignment:
310 gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa 408  Q
    ||||||||||||||||||||| | | ||||||  | |||||||| ||||||||| || |  ||||||| |   |||||||||||||||| ||||||||||    
48251001 gttgttcccacattacataaggttgtgccacataaataaatgacgtttttgccccctcggcagttaactgctgaggaatttgaattccggctgcagttaa 48250902  T
409 ctgccgaagaaaatctcggtagttaactg 437  Q
    ||||||| ||||| ||||| |||||||||    
48250901 ctgccgaggaaaacctcgggagttaactg 48250873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 46989522 - 46989616
Alignment:
343 agtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||||||||| |||||||||||| |  |||||||   | || ||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
46989522 agtaaatgacgtttttgccctctcggcagttaactaccgagaaatttgaattccggctgcagttaactgccgaggaaaacctcggtagttaactg 46989616  T

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Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 578 - 677
Target Start/End: Original strand, 7314586 - 7314685
Alignment:
578 cataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacat 677  Q
    |||||| ||||  ||||||  |||||| ||||||| ||| |||||||| ||  |||||||| |||||||||| || || |||||||||||| ||||||||    
7314586 cataaataagaacaatacataatctttcacaattgaccaaaattaaatcaattcgacattttgttaaaattatacgaatgtttgaaattcaacaaaacat 7314685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 14398549 - 14398612
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaa 445  Q
    |||||||||||||||| ||||||||||||||||| | ||  ||||| |||||||||| ||||||    
14398549 aggaatttgaattccggctgcagttaactgccgagggaatcctcggaagttaactgtcgaggaa 14398612  T

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Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 48888766 - 48888809
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| |||||||||||||||||||||    
48888766 tccggctgcagttaactgccgaggaaaatctcggtagttaactg 48888809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 310 - 444
Target Start/End: Original strand, 55385078 - 55385213
Alignment:
310 gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa 408  Q
    |||||||||||||| |||||| | | | ||||| ||||| |||| ||||||||| || |  ||||||| | | | |  || ||| |||| ||||||||||    
55385078 gttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctgcagttaa 55385177  T
409 ctgccgaagaaaatctcggtagttaactgttgagga 444  Q
    ||||||| ||||| |||||||||||||||| |||||    
55385178 ctgccgaggaaaacctcggtagttaactgtcgagga 55385213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 1388236 - 1388183
Alignment:
310 gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccc 362  Q
    ||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
1388236 gttgttcccacattacataaggctgtgccacacaagtaaatgacatttttgccc 1388183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 43476132 - 43476261
Alignment:
310 gttgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaat-tccgactgcagtta 407  Q
    ||||||| ||||||||||||| | | ||||||| |||||||||| ||||||||| || |  ||||||| | | | |  || |||  |||| |||||||||    
43476132 gttgttctcacattacataaggttgtgccacacgagtaaatgacgtttttgccccctcggaagttaactgccgaagttttagaaaatccggctgcagtta 43476231  T
408 actgccgaagaaaatctcggtagttaactg 437  Q
    |||||||| ||||| |||||||||||||||    
43476232 actgccgaggaaaacctcggtagttaactg 43476261  T

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Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 49219897 - 49219796
Alignment:
335 gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaa 434  Q
    ||||||| ||||||  ||| |||||||  || | |||||||| | | ||||||| ||| |||| ||||||||||||||||| ||||| || |||||||||    
49219897 gccacactagtaaaatacaattttgcctcctcggtagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaaaccttggtagttaa 49219798  T
435 ct 436  Q
    ||    
49219797 ct 49219796  T

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Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 445
Target Start/End: Original strand, 8475859 - 8475903
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaa 445  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||    
8475859 gcagttaactgccgaggaaaacctcggtagttaactgctgaggaa 8475903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 49144496 - 49144460
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||||||| |||||||||||||||    
49144496 gcagttaactgccgaagaaaacctcggtagttaactg 49144460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 2647746 - 2647703
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
2647746 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 2647703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 7839519 - 7839472
Alignment:
423 ctcggtagttaactgttgaggaagactgattatgcagacagtgggttc 470  Q
    |||||||||||||||  |||||| ||| ||||||||||||||||||||    
7839519 ctcggtagttaactgccgaggaaaactaattatgcagacagtgggttc 7839472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 34049106 - 34049149
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
34049106 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 34049149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 50998727 - 50998676
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaa 445  Q
    |||| ||||||||||||||||||||||| | |||||| ||||||| ||||||    
50998727 tccggctgcagttaactgccgaagaaaaccgcggtagctaactgtcgaggaa 50998676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 54389821 - 54389864
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
54389821 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 54389864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 2647762 - 2647812
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactga 451  Q
    ||||||||||||||||||||| |||||| ||||||||  |||||| |||||    
2647762 gcagttaactgccgaagaaaacctcggtggttaactgccgaggaaaactga 2647812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 19440287 - 19440325
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| ||||| |||||||||||||||    
19440287 ctgcagttaactgccgaggaaaacctcggtagttaactg 19440325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 41579766 - 41579728
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| ||||| |||||||||||||||    
41579766 ctgcagttaactgccgaggaaaacctcggtagttaactg 41579728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 41803029 - 41803067
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| ||||| |||||||||||||||    
41803029 ctgcagttaactgccgaggaaaacctcggtagttaactg 41803067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 5136527 - 5136580
Alignment:
310 gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccc 362  Q
    ||||||||||||||||||||| ||  ||||||| |||||||||| |||||||||    
5136527 gttgttcccacattacataagactgtgccacacaagtaaatgacgtttttgccc 5136580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 415
Target Start/End: Complemental strand, 23443165 - 23443132
Alignment:
382 aggaatttgaattccgactgcagttaactgccga 415  Q
    |||||||||||||||| |||||||||||||||||    
23443165 aggaatttgaattccggctgcagttaactgccga 23443132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 434
Target Start/End: Original strand, 49217112 - 49217161
Alignment:
385 aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaa 434  Q
    |||| ||| |||||||||||||||||||| |  |||||||||||||||||    
49217112 aattagaaatccgactgcagttaactgccaagaaaaatctcggtagttaa 49217161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 327; Significance: 0; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 24754083 - 24753588
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| | || |||||||||||| |||| ||||| ||||||| | |||||  |||||| |||||||||||||||||   |||||||||||||||    
24754083 aggaatttgaaattcggctgcagttaactaccgaggaaaacctcggtaataaactgccgaggaaaactgattatgcagacagcaagttctgcataattct 24753984  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||  ||||||    
24753983 aaacatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactgggacata 24753884  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca 681  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
24753883 aacaagataaatacaatatcttttacaatttttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattaca 24753784  T
682 aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata 781  Q
    |||||||||| |||||||||||||||||||||||||||||      |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
24753783 aagtgtccataattaaacaactcattacacatcattaaat------taaatccctacttacattcaacgcaattgcatatggaacaaacatacatatata 24753690  T
782 atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc 881  Q
    ||||||||| |||||||||||||  |||||||||| ||| |||||  ||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
24753689 atatattattttccaccatattccgaaacataaatacgatgtcgccgtcgtcgcgaataagcaaaagcatatagcttgccgttttccatacgtattcatc 24753590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 370 - 883
Target Start/End: Original strand, 3795339 - 3795859
Alignment:
370 agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggtt 469  Q
    ||||||| ||| ||||||||||| |||| ||||||||||||||||| ||||| || || |||||||||  |||||| ||||||||||||||||||||||     
3795339 agttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaaccttggaagttaactgccgaggaaaactgattatgcagacagtgggt- 3795437  T
470 ctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttga 569  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||    
3795438 ctgcataattctaaacatttccaagccatttttttggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattga 3795537  T
570 aactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca- 668  Q
    ||||| |||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
3795538 aactcggacataatgaagataagtacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcat 3795637  T
669 -------------tcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaatt 755  Q
                 ||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||||||| |||||||||||||||||||||    
3795638 caaattaaactactcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattcaacgcaatt 3795731  T
756 gcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatag 855  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||||| |||||||||||    
3795732 gcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgtcgccgtcgtcacgaataagcaaaggcatatag 3795831  T
856 cttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||||||||||||    
3795832 cttgccgttttccatgcgtattcatctc 3795859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 7267484 - 7267008
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatt 499  Q
    ||||||||||||| | |||||||||||||||||||||  ||||||  ||||||||||||||||||||| |||||||||| |||| |||||||||| ||||    
7267484 gcagttaactgccaaggaaaatctcggtagttaactgccgaggaaatctgattatgcagacagtgggt-ctgcataattgtaaagcatttccaagccatt 7267386  T
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||  ||||||||| |||||||  ||||||| |||||||    
7267385 ttttcggccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataatttatacaagattgaaactcggacataatgaagataagtacaata 7267286  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac 699  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
7267285 tcttttacaattgttcataattaaattaaacctacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaac 7267186  T
700 aactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacca 799  Q
     |||||||||||||||||||||      |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
7267185 tactcattacacatcattaaat------taaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccacca 7267092  T
800 tattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||  ||||||||||||||||||||  ||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
7267091 tattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggtatatagcttgtcgttttccatgcgtattcatctc 7267008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 424 - 883
Target Start/End: Complemental strand, 39798456 - 39798004
Alignment:
424 tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa 523  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||    
39798456 tcggcagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttttcggccagtttttacctgtaa 39798357  T
524 ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa 623  Q
    ||||||||||| |||| ||||||  |||||||||||||||  ||||||||| | ||||| |||||||||| ||||||||||||||||||| |||||||||    
39798356 ttaaaccagacaatttccaaaggttaaataattcatacaatattgaaactcggtcataatcaagataaatgcaatatcttttacaattgttcataattaa 39798257  T
624 attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt 722  Q
    |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||  |||||| ||||||| |||||||||||||||||         
39798256 attaaaccgacattttggttaacattaaacaaacgtttgaaattcatcaaaacattacaaa--gtccataattaaactactcattacacatcatt----- 39798164  T
723 aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg 822  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
39798163 -aaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 39798065  T
823 tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
39798064 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 39798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 28342554 - 28343032
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    ||||| ||||||||||| |||| ||| ||||||||||||  |||||| ||  ||||||||||||||||||||||||||||||||||  ||||||||  |     
28342554 ctgcaattaactgccgaggaaattcttggtagttaactgccgaggaaaaca-attatgcagacagtgggttctgcataattctaaagaatttccaa-act 28342651  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
     ||||||||||| |||||| |||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||||    
28342652 atttttcggccagtttttatctgtaattaaaccagaacatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaa 28342751  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||    
28342752 tatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcatcaaaacgttacaaagtgttcataattaa 28342851  T
698 acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 797  Q
    |||| |||||||||||||||      |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
28342852 acaattcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 28342945  T
798 catatt-ctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||    
28342946 catattccgaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttacatgtgtattcgtctc 28343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 429 - 883
Target Start/End: Original strand, 1096630 - 1097092
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  |||||| |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
1096630 agttaactgccgaggaaaactgattatgaagacagtgggttatgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaa 1096729  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| ||||| |||||||||||||||||||||||| || |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
1096730 ccagagcatttccaaaggcaaaataattcatacaacattaaaactcggacataaacaagataaatacagtatcttttacaattgtccataattaaattaa 1096829  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtc--------------catgattaaacaactcattacacatc 714  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||              ||| |||||||||||||||||| |||    
1096830 accgacatttggttcaaactacacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgttcataattaaacaactcattacatatc 1096929  T
715 attaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataa 814  Q
    |||      |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
1096930 att------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataa 1097023  T
815 atccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    || |||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||| ||||    
1097024 attcgacgtcgctatcgtcgcaaataagcccaagcatataacttgccgttttccatgcgtattcgtctc 1097092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 401 - 883
Target Start/End: Complemental strand, 41564532 - 41564054
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| ||||||||||||| |   |||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
41564532 gcagttaactgccgaggaaaacctcggtagttaacggccaaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 41564433  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
41564432 tttcggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 41564333  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
41564332 atcttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 41564233  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    | |||||||||||||||||||||      |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
41564232 ctactcattacacatcattaaat------taaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccacc 41564139  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
41564138 atattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 41564054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 41181493 - 41181919
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    ||||||||||||||||||| |||||||||||||  |||||||||| |||||||| ||| | ||||||||||||||||||||||| ||||| |||||||||    
41181493 attatgcagacagtgggttatgcataattctaatgcatttccaagccattttttgggc-agtttttacctgtaattaaaccagagcatttccaaaggcaa 41181591  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| ||||||||| ||||||||| | |||||  |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||    
41181592 tataaatcatacaacattgaaactcggtcataactaagaaaaatacaatatcttttacagttgtccataattaaatcaaaccgacatttggttcaaatta 41181691  T
650 cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac 749  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||      |||||||||| |||||||||||||||    
41181692 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaac 41181785  T
750 gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc 849  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||| ||    
41181786 gcaattacatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgtataagccaatgc 41181885  T
850 atatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||||||||||||| ||||    
41181886 atatagcttgccgttttccatgcgtattcgtctc 41181919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 403 - 883
Target Start/End: Complemental strand, 5351770 - 5351295
Alignment:
403 agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttt 502  Q
    ||||||||||||| ||||| |||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||||    
5351770 agttaactgccgaggaaaacctcggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattttt 5351671  T
503 tcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaatat 600  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||||    
5351670 tcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatat 5351572  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca 700  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||     
5351571 cttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaact 5351472  T
701 actcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 800  Q
    |||||||||||||||||||||||||      || |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
5351471 actcattacacatcattaaattaaa------tccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 5351378  T
801 attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
5351377 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 5351295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 43943720 - 43944210
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    ||||||||||||| ||| ||||| |||||||||||||||  |||||| |   |||||||||| | |||||| |||||||||||||| |||||||||| ||    
43943720 ctgcagttaactgtcgaggaaaaactcggtagttaactgccgaggaaaaacaattatgcagagaatgggttatgcataattctaaagcatttccaagcca 43943819  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaata--attcatacaacgttgaaactcagacataaacaagataaatac 595  Q
    ||||| ||| || ||||||||||||||||||||||| ||||| |||||||||||||  | ||||||||| || |||||| | ||||||||||| ||||||    
43943820 ttttt-cggtcagtttttacctgtaattaaaccagagcatttccaaaggcaaaatataaatcatacaacattaaaactcggtcataaacaagaaaaatac 43943918  T
596 aatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgatt 695  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||  |    
43943919 aatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacaaaaaagtttgaaattcatcaaaacgttacaaagtgtccatgcat 43944018  T
696 aaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatc 791  Q
    ||||||| |||||||  |||||| |     | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
43944019 aaacaacacattacaattcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatatattatattatc 43944118  T
792 ttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||  ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
43944119 ttccaccatattccgaaacataaatctgacgtcgctatcatcgcgaataagccaatgcatatagcttgccgttttccatgcgtattcatctc 43944210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 449 - 883
Target Start/End: Complemental strand, 45479813 - 45479385
Alignment:
449 tgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggc 547  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||  |||||| |||||| ||||||| ||||||| ||||||| ||||| |||||||    
45479813 tgattatgcagacagtgggttctgcataattctaaagcattttcaagctattttt-cggccagtttttacttgtaatttaaccagagcatttccaaaggc 45479715  T
548 aaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaat 647  Q
    || |||| | ||||||| || |||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||     
45479714 aatataactaatacaacatttaaactcagtcataaacaagtaaaatacaatatcttttacaattgttcataattaaatcaaaccgacatttggttcaaaa 45479615  T
648 tacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattca 747  Q
    |||| ||| ||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||      |||||| |||||||||||||    
45479614 tacaaaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattacacatcattaaat------taaatccctacttacattca 45479521  T
748 acgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaag 847  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||    
45479520 acgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgccgatatcgtcgcgaataagccaag 45479421  T
848 gcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||| |||||||||||    
45479420 gcatatagcttgccgttttccatgtgtattcatctc 45479385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 425 - 883
Target Start/End: Original strand, 209041 - 209494
Alignment:
425 cggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaat 524  Q
    |||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||    
209041 cggtagttaactgccgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaat 209140  T
525 taaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataatta 622  Q
    ||||||||| ||||  |||||| || ||||||||||   |   ||||||||| |||||||  |||||||||||||||||||||||||||||  |||||||    
209141 taaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataatta 209239  T
623 aattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt 722  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||         
209240 aattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt----- 209334  T
723 aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg 822  Q
     ||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
209335 -aaattaaatccatacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacg 209433  T
823 tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
209434 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 209494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 449 - 883
Target Start/End: Original strand, 10620054 - 10620483
Alignment:
449 tgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggca 548  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||  |||||| |    
10620054 tgattatgcagacagcaggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcattc-caaaggta 10620152  T
549 aaataattcatac--aacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa 646  Q
    | ||||||||||   |   ||||||||| |||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
10620153 atataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttaataattaaattaaaccgacatttggttaaaa 10620252  T
647 ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc 746  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||||||| ||||||||||||    
10620253 ttaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattc 10620346  T
747 aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa 846  Q
    || |||||| |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||  ||||||||||||||| ||    
10620347 aatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa 10620446  T
847 ggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||||||||||    
10620447 ggcatatagcttgccgttttccatgcgtattcatctc 10620483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 369 - 883
Target Start/End: Original strand, 24601640 - 24602160
Alignment:
369 tagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggt 468  Q
    |||||||| ||| |||||||| ||  | | |||||||||||| |||| ||||   ||||||||||||||  |||||| |||||||||||||||||||| |    
24601640 tagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccgaggaaaactgattatgcagacagtggat 24601739  T
469 tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt 567  Q
    ||| |||||||| ||| |||||||||| ||||||| ||| || ||||||| ||||||||||||||| ||||| ||||||||| |||| ||||||||| ||    
24601740 tctacataattcaaaagcatttccaagccattttt-cggtcagtttttacttgtaattaaaccagagcatttccaaaggcaatataaatcatacaacatt 24601838  T
568 gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc 667  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
24601839 gaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacagacgtttgaaattc 24601938  T
668 atcaaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaa 753  Q
    |||||||| |||||              |||||||||| |||||||||||||||||||||||||      |||||||||| |||||||||||||||||||    
24601939 atcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaa 24602032  T
754 ttgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatat 853  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||    
24602033 ttgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatccgacgttgctatcgtcgcgaataagccaaggcatat 24602130  T
854 agcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||| ||||||| ||||    
24602131 agcttgccgttttccatccgtattcgtctc 24602160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 369 - 883
Target Start/End: Complemental strand, 24612474 - 24611954
Alignment:
369 tagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggt 468  Q
    |||||||| ||| |||||||| ||  | | |||||||||||| |||| ||||   ||||||||||||||  |||||| |||||||||||||||||||| |    
24612474 tagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccgaggaaaactgattatgcagacagtggat 24612375  T
469 tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt 567  Q
    ||| |||||||| ||| |||||||||| ||||||| ||| || ||||||| ||||||||||||||| ||||| ||||||||| |||| ||||||||| ||    
24612374 tctacataattcaaaagcatttccaagccattttt-cggtcagtttttacttgtaattaaaccagagcatttccaaaggcaatataaatcatacaacatt 24612276  T
568 gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc 667  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
24612275 gaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacagacgtttgaaattc 24612176  T
668 atcaaaacattacaaagtgt--------------ccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaa 753  Q
    |||||||| |||||||||||              |||| |||||||||||||||||||||||||      |||||||||| |||||||||||||||||||    
24612175 atcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaa 24612082  T
754 ttgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatat 853  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||    
24612081 ttgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatccgacgttgctatcgtcgcgaataagccaaggcatat 24611984  T
854 agcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||| ||||||| ||||    
24611983 agcttgccgttttccatccgtattcgtctc 24611954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 399 - 883
Target Start/End: Complemental strand, 9660097 - 9659604
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    |||||||| |||||||| ||||| || ||||||||| ||  |||||| ||  ||||||||||||||||||| |||||||||||||| |||||||||| ||    
9660097 ctgcagttgactgccgaggaaaaccttggtagttaattgccgaggaaaaca-attatgcagacagtgggttatgcataattctaaaacatttccaagcca 9659999  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    ||||| |||||| ||||||||| ||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||||    
9659998 ttttt-cggccagtttttacctttaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaa 9659900  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca--------------aa 683  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||              ||    
9659899 tatcttttacaattgtccataattaaatcaaaacgacatttggttaaaattacacaaacgcttgaaattcatcaaaacgttacacagtgtccataattaa 9659800  T
684 gtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatac--atatata 781  Q
    |||||||| |||||||||||||||||||||||||      |||||||||  ||||||||||||||||||||||||||| ||||||||||||  ||||| |    
9659799 gtgtccataattaaacaactcattacacatcatt------aaattaaatacctacttacattcaacgcaattgcatattgaacgaacatacaaatataaa 9659706  T
782 atatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatc 881  Q
    |||||||||||||||||||||||  |||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
9659705 atatattatcttccaccatattccgaaacataaactcgacgtcgctatcgtcacgaataagccaaggcatatagcttgccgttttccatgcgtattcgtc 9659606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 447 - 882
Target Start/End: Original strand, 12905601 - 12906037
Alignment:
447 actgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaag 545  Q
    |||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||| || ||| |||||||   ||||| ||||||| ||||| |||||    
12905601 actggttatgcagacagtgagttctgcataattctaaagcatttccaagccattttt-cgaccagtttttac---taatttaaccagagcatttccaaag 12905696  T
546 gcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaa 645  Q
    |||| |||| ||||||||| || |||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||    
12905697 gcaatataactcatacaacatttaaactcagtcataaacaagtaaaatacaatatattttacaattgtccataattaaatcaaaccgacatttggttcaa 12905796  T
646 attacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctactta 741  Q
    | |||||||| ||||||||||||||||||| ||||| |||||| || |||||||||| |||||||  |||||| |     | ||||||||||  ||||||    
12905797 aatacacaaaagtttgaaattcatcaaaacgttacatagtgtcaataattaaacaacacattacaactcattacacatcattaaattaaatccgtactta 12905896  T
742 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataa 841  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
12905897 cattcaacgcaattgcatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataa 12905996  T
842 gccaaggcatatagcttgccgttttccatgcgtattcatct 882  Q
    ||||||||||||||||||  |||||||||||||||||||||    
12905997 gccaaggcatatagcttgttgttttccatgcgtattcatct 12906037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 41052704 - 41053142
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| |||||||||||||||||||||||  |||| |||||||||    
41052704 attatgcagacagtgggttctgcataattctaaagcatttccaagccatttt-tcggccagtttttacctgtaattaaaccagagtatttccaaaggcaa 41052802  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
41052803 tataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatta 41052902  T
650 cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaac--tcattacaca--tcattaaattaaaattaaatctctacttacatt 745  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||    |  | |||| |||  |||||| |  |  |||||||  |||||||||||    
41052903 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaattcattaca-catcattaaattcctacttacatt 41053001  T
746 caacgcaattgc--atatggaacgaacatacatatat-aatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataag 842  Q
    ||| ||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
41053002 caatgcaattgcatatatggaacgaacacacatatataaatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataag 41053101  T
843 ccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||| ||||||| |||||||||| ||||    
41053102 ccaaggcatatagcttggcgttttcaatgcgtattcgtctc 41053142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 41004559 - 41005045
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    |||||||||||||||||| ||||  ||||||||||||||  |||||| | | |||||||||||||||| ||||||||||||||||| |||||| ||| ||    
41004559 ctgcagttaactgccgaaaaaaacttcggtagttaactgccgaggaaaaat-attatgcagacagtggattctgcataattctaaagcatttcaaagcca 41004657  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    ||||  ||| || ||||||||||||||||||||  | ||||| ||||| ||| |||| ||||||||| ||||||||| | ||||||||||| ||||| ||    
41004658 tttt--cggtcagtttttacctgtaattaaaccgaagcatttccaaagacaatataaatcatacaacattgaaactcggtcataaacaagaaaaatataa 41004755  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
41004756 tatcttttacaattgtctataattaaatcaaaccaacatttggtttaaattacacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaa 41004855  T
698 acaactcattacacatcattaaa----ttaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatctt 793  Q
    ||||| |||||||  |||||| |     | | |||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||| || ||    
41004856 acaacacattacaactcattacacatcattatattaaatcactacttacattcatcacaattgcatatggaatgaacatacatatataatatataatttt 41004955  T
794 ccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
     || |||||||| ||||||||||| |||||| | ||||||   ||||||||| ||||| ||||||| |||||||||||||||||||||||    
41004956 tcaacatattctgaaacataaatctgacgtcccaatcgtctttaataagccagggcatgtagcttgtcgttttccatgcgtattcatctc 41005045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 471 - 883
Target Start/End: Complemental strand, 439792 - 439374
Alignment:
471 tgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttga 569  Q
    |||||||||||||| |||||||||| ||||||| ||| || ||||||||||||||||||||||  ||||| ||||||||| |||| ||||||||| ||||    
439792 tgcataattctaaagcatttccaagccattttt-cggtcagtttttacctgtaattaaaccagcgcatttccaaaggcaatataaatcatacaacattga 439694  T
570 aactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat 669  Q
    ||||| | |||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
439693 aactcggtcataaacaaga--aatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttgaaattcat 439596  T
670 caaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaatt 755  Q
    |||| | |||||              |||||| ||| ||||||||||||||||||||| |||      | |||||||| || |||||||||| | |||||    
439595 caaagcgttacaaagtatccataattaagtgttcataattaaacaactcattacacatgatt------atattaaatccctccttacattcatcacaatt 439502  T
756 gcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatag 855  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||   ||||||||| |||||||||    
439501 gcatatggaacgaacatacatatataatatattactttccaccatattccgaaacataaatccgacgtcgctatcgtctttaataagccagggcatatag 439402  T
856 cttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||||||||||||    
439401 cttgccgttttccatgcgtattcatctc 439374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 369 - 883
Target Start/End: Complemental strand, 82333 - 81814
Alignment:
369 tagttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggt 468  Q
    |||||||| ||| || ||||||||  ||| ||||||||||||| ||| ||||| ||| ||||||||||| ||||||| ||  |||||||||||| || ||    
82333 tagttaactgtcgagtaatttgaaa-ccggctgcagttaactgtcgaggaaaacctccgtagttaactgctgaggaaaaca-attatgcagacaatgagt 82236  T
469 tctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgtt 567  Q
    |||||||||||||||| ||||| |||  ||||||| ||| || ||||||||||||||||||||||| |||||  |||||||  |||| |||| |||| |     
82235 tctgcataattctaaagcattttcaaaccattttt-cggtcagtttttacctgtaattaaaccagagcatttctaaaggcagtataaatcatccaacatc 82137  T
568 gaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattc 667  Q
     |||||  | ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| || ||||||||||||||||||||||||    
82136 aaaacttggtcataaacaagaaaaatacaatatcttttacaattgtccata-ttaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattc 82038  T
668 atcaaaacattacaaagtgtc--------------catgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaa 753  Q
    |||||||| ||||||||||||              ||| ||||||||||||||||||||| |||      | |||||||   |||||||||||| | |||    
82037 atcaaaacgttacaaagtgtccataattaagtgtgcataattaaacaactcattacacatgatt------atattaaatgcatacttacattcatcacaa 81944  T
754 ttgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatat 853  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||| |||||||   |||||| ||||| ||||    
81943 ttgcatatggaacgaacatacatatataatatattattttcaaccatattccgaaacataaatccgacgtcgttatcgtctttaataagtcaagggatat 81844  T
854 agcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||||||||||||||    
81843 agcttgccgttttccatgcgtattcatctc 81814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 429 - 781
Target Start/End: Complemental strand, 38950565 - 38950232
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaa 528  Q
    |||||||||  ||||||  ||||||||||||||||||||||||||||||||||||  |||||| || |||||||             |||||||||||||    
38950565 agttaactgccgaggaaatctgattatgcagacagtgggttctgcataattctaagtatttccgagccattttt-------------acctgtaattaaa 38950479  T
529 ccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaa 628  Q
    ||||| ||||| |||||| || |||||||||||||  ||||||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
38950478 ccagagcatttccaaaggtaatataattcatacaagattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaattaa 38950379  T
629 accgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaatt 728  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||      |    
38950378 accgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcattaaat------t 38950285  T
729 aaatctctacttacattcaacgcaattgcatatggaacgaacatacatatata 781  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||    
38950284 aaatccctacttacattcaacacaattacatatggaacgaacatacatatata 38950232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 401 - 725
Target Start/End: Original strand, 18000265 - 18000590
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  ||||||   |||||||||||||||  ||||||||||||||||||  ||||||||| |||||    
18000265 gcagttaactgccgaggaaaacctcggtagttaactggcgaggaaatttgattatgcagacagcaggttctgcataattctaagtatttccaagccattt 18000364  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatac--aacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||| ||||||||||||||||||||||| ||||  |||||| || ||||||||||   |   ||||||||| |||||||  ||||||||||||||    
18000365 tttcggccagtttttacctgtaattaaaccagagcattc-caaaggtaatataattcatatgtatgattgaaactcggacataatgaagataaatacaat 18000463  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
18000464 atcttttacaattgttaataattaaattaaaccgacatttggttaaaattaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaa 18000563  T
699 caactcattacacatcattaaattaaa 725  Q
    | |||||||||||||||||||||||||    
18000564 ctactcattacacatcattaaattaaa 18000590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 406 - 671
Target Start/End: Original strand, 10825256 - 10825521
Alignment:
406 taactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttc 504  Q
    |||||| ||| ||||| ||||| |||||||||  ||| ||  |||||||||||| ||||| | ||||||| |||||||| |||||||||| |||||||||    
10825256 taactgtcgaggaaaacctcggcagttaactgccgagaaaatctgattatgcaggcagtgagctctgcatcattctaaaacatttccaag-cattttttc 10825354  T
505 ggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttt 604  Q
    ||||| ||||||||||||||||||||||| |||||  |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
10825355 ggccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcagacataaacaagataaatacaatatcttt 10825454  T
605 tacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||    
10825455 tacaattgtccataattaaatcaaacagacatttggttcaaattacacaaacgtttgaaattcatca 10825521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 370 - 666
Target Start/End: Complemental strand, 25184900 - 25184606
Alignment:
370 agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggtt 469  Q
    ||||||| ||| |||||||||||  ||| ||||||||||||||||| ||||| |||||||||||||||  |||||| ||  |||||| | ||||||||||    
25184900 agttaactgtcgaggaatttgaaa-ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaaca-attatgtaaacagtgggtt 25184803  T
470 ctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttg 568  Q
    ||| ||||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||||||  |||||||||||||| |||| ||||||||| |||    
25184802 ctgtataattctaaaacatttccaagccattttt-cggccagtttttacctgtaattaaaccagagtattttcaaaggcaatataaatcatacaacattg 25184704  T
569 aaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaatt 666  Q
    |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||    
25184703 aaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgatatttggttcaaattacacaaacgtttgaaatt 25184606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 407 - 671
Target Start/End: Complemental strand, 39951203 - 39950941
Alignment:
407 aactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcg 505  Q
    |||||||||  |||| |||||||||||| ||| ||||||  ||||||  |||  ||||| | ||||||| |||||||| |||||||||| | ||||||||    
39951203 aactgccgattaaaacctcggtagttaattgtcgaggaaatctgatt--gcaagcagtgagctctgcatcattctaaaacatttccaagcc-ttttttcg 39951107  T
506 gccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatctttt 605  Q
     ||| |||||| |||||||||||||||| |||||  |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
39951106 accagtttttatctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaacattgaaactcggacataaacaagataaatacaatatctttt 39951007  T
606 acaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||    
39951006 acaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatca 39950941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 32952861 - 32953033
Alignment:
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat 598  Q
    |||||||| || |||||||||||||||||| |||| |||||  ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||    
32952861 tttttcggtcagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcagacatcaacaagaaaaatacaat 32952960  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
32952961 attttttacaattgtccataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 32953033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 693 - 883
Target Start/End: Complemental strand, 1150779 - 1150595
Alignment:
693 attaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatct 792  Q
    ||||||||| |||||||||||||||||||||||      || |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||    
1150779 attaaacaattcattacacatcattaaattaaa------tcactacttacattcaatgaaattgcatatggaacgaacatacatatataatatagtatct 1150686  T
793 tccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||| ||||||| |||||||||||||||||||||||||||| | ||||| ||||||| ||||| ||||||||||||||||||||| |||||    
1150685 tccatcatattccaaaacataaatccgacgtcgctatcgtcacaaataaaccaaggcgtatagtttgccgttttccatgcgtatttatctc 1150595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 385 - 671
Target Start/End: Original strand, 29397927 - 29398208
Alignment:
385 aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct--- 481  Q
    |||| ||| |||||||||||||||||||||| ||||| ||||| |||||||||  |||||| ||     | ||||||| || | ||||||| || ||       
29397927 aattagaaatccgactgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaac-----aagcagacattgagctctgcatgatactttc 29398021  T
482 --aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagaca 579  Q
      |||||||| ||| |||||||| |||||| |||||||||||||||||| |||| |||||  ||||||||||||||||||||||| ||||||||| ||||    
29398022 taaaacattttcaaatcattttt-cggccagtttttacctgtaattaaagcagagcatttcgaaaggcaaaataattcatacaacattgaaactcggaca 29398120  T
580 taaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||    || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||    
29398121 taa----gaaaaatacaatattttttacaattgtccataattaaattaaaccgacatttagttcaaattacacaaatgtttgaaattcatca 29398208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 778 - 883
Target Start/End: Complemental strand, 38949855 - 38949750
Alignment:
778 tataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtatt 877  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||||||||||    
38949855 tataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgccgttttccatgcgtatt 38949756  T
878 catctc 883  Q
    ||||||    
38949755 catctc 38949750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 312 - 574
Target Start/End: Complemental strand, 7190080 - 7189820
Alignment:
312 tgttcccacattacataagctcg-gccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaact 410  Q
    ||||||||||||||||||| | | ||||||| ||||||| || ||||||||| || |  ||||||| | | | |  || ||| |||| ||||||||||||    
7190080 tgttcccacattacataaggttgtgccacacgagtaaattacgtttttgccc-ctcggcagttaactgccgaagttttagaaatccggctgcagttaact 7189982  T
411 gccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggcca 509  Q
    ||||| |||||  ||||||||||||||  ||||||  ||||||  |||| ||||| | ||||||| |||||||| |||||||||| | ||||||||||||    
7189981 gccgaggaaaacttcggtagttaactgccgaggaaatctgatt--gcaggcagtgagctctgcatcattctaaaacatttccaagcc-ttttttcggcca 7189885  T
510 ttttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactc 574  Q
     ||||||||||||||||||||||| |||||  ||||||| || |||||||||||| |||||||||    
7189884 atttttacctgtaattaaaccagagcatttcgaaaggcagaacaattcatacaacattgaaactc 7189820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 509 - 869
Target Start/End: Original strand, 25613344 - 25613697
Alignment:
509 attttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttaca 608  Q
    |||| |||||||| ||| ||||| | || || || |||||| | || ||||||| | || ||| |||| ||||||||||| |||||||  ||||||||||    
25613344 atttattacctgtcattcaaccacatcaattccagaggcaatacaactcatacatcatttaaaatcagtcataaacaaga-aaatacataatcttttaca 25613442  T
609 attgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcatta 708  Q
    |||| ||| |||||||| || | | ||||| ||| ||||||||  || |||||||||||||||||| ||||   ||| |     ||||| |||| |||||    
25613443 attgaccaaaattaaatcaatcaggcattttgtttaaattacaagaatgtttgaaattcatcaaaatattaatgagtatttgaaattaatcaacacatta 25613542  T
709 cacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaa 808  Q
    || ||||||| || |||      |||||| | |||||| | |||  |||| |||||||||||| | | |||||||||||||||||  |  ||||||  ||    
25613543 catatcattacataaaa------tctctattgacattctatgcacatgcagatggaacgaacacaaagatataatatattatctttaattatattcataa 25613636  T
809 acataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttcca 869  Q
    |||||||||| |||||||||||||| |||||||| ||||||| |||||| |||||||||||    
25613637 acataaatcctacgtcgctatcgtcacgaataagtcaaggcacatagctcgccgttttcca 25613697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 578 - 698
Target Start/End: Original strand, 3206957 - 3207077
Alignment:
578 cataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacat 677  Q
    ||||||||||| | ||||| ||||||||||||||||| |||||||||| |||||||||||| ||| ||| || ||||| ||||||||||||||||||| |    
3206957 cataaacaagaaagatacattatcttttacaattgtctataattaaatcaaaccgacatttagttcaaagtatacaaaagtttgaaattcatcaaaacgt 3207056  T
678 tacaaagtgtccatgattaaa 698  Q
    | ||  |||||||| ||||||    
3207057 tgcatggtgtccataattaaa 3207077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 777 - 838
Target Start/End: Original strand, 43668499 - 43668560
Alignment:
777 atataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaa 838  Q
    |||||||||||||||||| ||||||| |  |||||||||||| ||||| |||||||| ||||    
43668499 atataatatattatcttcaaccatatgcctaaacataaatcctacgtcactatcgtcacgaa 43668560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 382 - 434
Target Start/End: Complemental strand, 27276433 - 27276381
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaa 434  Q
    ||||||||||| |||| ||||||||||||||||| ||||| ||||| ||||||    
27276433 aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaa 27276381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 445
Target Start/End: Complemental strand, 28472123 - 28472079
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaa 445  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||    
28472123 gcagttaactaccgaagaaaacctcggtagttaactgtcgaggaa 28472079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 17424158 - 17424201
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
17424158 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 17424201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 43982225 - 43982268
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
43982225 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 43982268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 382 - 420
Target Start/End: Original strand, 24749700 - 24749738
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaa 420  Q
    |||||||||||||||||||| ||||||||||||| ||||    
24749700 aggaatttgaattccgactgtagttaactgccgaggaaa 24749738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 28477109 - 28477071
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| ||||| |||||||||||||||    
28477109 ctgcagttaactgccgaggaaaacctcggtagttaactg 28477071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 403 - 437
Target Start/End: Original strand, 30493394 - 30493428
Alignment:
403 agttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||| |||||||||||||||||||||    
30493394 agttaactgccgaggaaaatctcggtagttaactg 30493428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 35493383 - 35493345
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||| |||||| ||||||||||||||    
35493383 ctgcagttaactgccgaggaaaatatcggtagttaactg 35493345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 326; Significance: 0; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 424 - 883
Target Start/End: Complemental strand, 5344 - 4890
Alignment:
424 tcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaa 523  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||    
5344 tcggcagttaactgccgaggaaaactgattatgcagacagtgggttctgcataattctagacatttccaagccattttttcggccagtttttacctgtaa 5245  T
524 ttaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa 623  Q
    |||||||||| ||||| ||||||| |||||||||||||||  ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||    
5244 ttaaaccagagcatttccaaaggctaaataattcatacaagattgaaactcggtcataatcaagataaatacaatatcttttacaattgttcataattaa 5145  T
624 attaaaccgaca-tttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaatt 722  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||         
5144 attaaaccgacattttggttaaaattaaacaaacgtttgaaattcatgaaaacattacaaagtgtccataattaaactactcattacacatcatt----- 5050  T
723 aaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacg 822  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
5049 -aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacg 4951  T
823 tcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
4950 tcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 4890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 845 - 900
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||| | || ||| ||||||||||||| ||||| |||||||||||||||    
845 aggaatttgaaattcggctgtagttaactgccgaggaaaacctcggtagttaactg 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 382 - 883
Target Start/End: Original strand, 22417 - 22923
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattct 481  Q
    ||||||||||| | || |||||||||||||| || |||||||||||||||||||||  |||||| ||||||||||||  ||||| |||||||||||||||    
22417 aggaatttgaaattcggctgcagttaactgctgaggaaaatctcggtagttaactgccgaggaaaactgattatgca--cagtgagttctgcataattct 22514  T
482 aaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacata 581  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||    
22515 aaacatttccaagccattttttcggccaatttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagattgaaactcggacata 22614  T
582 aacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca 681  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
22615 atcaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaaacaaacg-ttgaaattcatcaaaacattaca 22713  T
682 --------------aagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacg 767  Q
                  |||||||||| |||||||||||||||||||||||||      |||||||||| |||||||||||||||||||||||| ||||||||    
22714 aagtgttcataattaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcaaatggaacg 22807  T
768 aacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttc 867  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||  ||||||| ||||||| |||||||||||||||||||||||    
22808 aacatacatatataatataatattttccaccatattctgaaacataaatccgacgtcgccgtcgtcgcaaataagcaaaggcatatagcttgccgttttc 22907  T
868 catgcgtattcatctc 883  Q
    ||||||||||||||||    
22908 catgcgtattcatctc 22923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 310; Significance: 1e-174; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 451 - 883
Target Start/End: Complemental strand, 31151054 - 31150629
Alignment:
451 attatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| ||||||| || ||| ||||||||| ||||||| ||||| ||||| ||||||||||    
31151054 attatgcagactgtgggttctgcataattctaaatatttccaagccattttt-cgcccagtttttacctataattaatccagagcatttccaaaggcaaa 31150956  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||    
31150955 ataattcatacaacattgaaactcggacataaacaaggtaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttccaattac 31150856  T
651 acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacg 750  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||      |||||| |||| |||||||||||    
31150855 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcattaaat------taaatccctacatacattcaacg 31150762  T
751 caattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggca 850  Q
    ||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
31150761 caattgcatatcgatcaaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggca 31150662  T
851 tatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||| |||||||||||||    
31150661 tatagcttgccgttttccaagcgtattcatctc 31150629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 451 - 883
Target Start/End: Original strand, 29286285 - 29286711
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||    
29286285 attatgcagacagtaggttctgcataattctaaagcatttccaagccatttt-tcggccagtttttacttgtaattaaaccagagcattttcaaaggcaa 29286383  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| ||||||||||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
29286384 tataaatcatacaacgttgaaactcggtcttaaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaatta 29286483  T
650 cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac 749  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||      |||||||| |||||||||||||||||    
29286484 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatcatt------aaattaaacctctacttacattcaac 29286577  T
750 gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc 849  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
29286578 gcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc 29286677  T
850 atatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||| ||||||||||| ||| |||||| ||||    
29286678 atatagtttgccgttttctatgtgtattcgtctc 29286711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 401 - 883
Target Start/End: Original strand, 13382662 - 13383150
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  |||||| |||||||||||||||||||||| |||||||||| |||||||||||||| |||||    
13382662 gcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaactgattatgcagacagtgggt-ctgcataattgtaaacatttccaagccattt 13382760  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    || || ||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||  ||||||| ||||||||    
13382761 tt-cgaccagtttttacctgtaattaaaccagagcatttccaaaggcaaaataattcatacaagtttgaaactcggacataataaagataactacaatat 13382859  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattca--------------tcaaaacattacaaagtg 686  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||              ||||||||||||||||||    
13382860 cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaattaaactactcaaaacattacaaagtg 13382959  T
687 tccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatata 786  Q
    ||||| ||||||| ||||||| |||||||||      |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
13382960 tccataattaaactactcattgcacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatata 13383053  T
787 ttatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
13383054 ttatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgacgttttccatgcgtattcatctc 13383150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 399 - 883
Target Start/End: Original strand, 23958921 - 23959399
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtca 497  Q
    |||||||||| |||||| ||||| |||||||||||||||  ||| || |||| ||||||||||||||| ||||||||||||||||| |||||||||| ||    
23958921 ctgcagttaaatgccgaggaaaacctcggtagttaactgccgagaaaaactggttatgcagacagtggattctgcataattctaaagcatttccaagcca 23959020  T
498 ttttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaa 597  Q
    ||||| || |||  |||||||||||||||||||||| ||||| ||||||||| |||| | ||||||| || |||||||| ||||||||||  ||||||||    
23959021 ttttt-cgaccagattttacctgtaattaaaccagagcatttccaaaggcaatataacttatacaacatttaaactcagtcataaacaagtaaaatacaa 23959119  T
598 tatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaa 697  Q
    ||| |||||||||||| ||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||  ||||| ||||||||| |||||    
23959120 tattttttacaattgttcataattaaatcaaaccgacatttggttcaaaatacacaaaagtttgaaattcatcaaaatgttacatagtgtccataattaa 23959219  T
698 acaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccac 797  Q
    ||||| ||||||||||||||      |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
23959220 acaacacattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttacac 23959313  T
798 catattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||  |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
23959314 catattccgaaacataaatccaacgtcgctatcgtcgtgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 23959399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 449 - 883
Target Start/End: Original strand, 1608373 - 1608803
Alignment:
449 tgattatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggca 548  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||| | |    
1608373 tgattatgcagacagcaggttctgcataattctaagtatttccaagccattttttcggccagtttttacctgtaattaaaccagagcatttccaaaagta 1608472  T
549 aaataattcatac--aacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaa 646  Q
    | ||||||||||   |   ||||||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
1608473 atataattcatatgtatgattgaaactcggacataatgaagataaatacaatatcttttacaattgttcataattaaattaaaccgacatttggttaaaa 1608572  T
647 ttacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattc 746  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||      |||||||||| ||||||||||||    
1608573 ttaaacagacgtttgaaattcatcaaaacattacaaagtgtccataattaaactactcattacacatcatt------aaattaaatccctacttacattc 1608666  T
747 aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa 846  Q
    || |||||| |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||  ||||||||||||||| ||    
1608667 aatgcaattacatatggaacgaacatacatatataatatattgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaa 1608766  T
847 ggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||||||||||    
1608767 ggcatatagcttgccgttttccatgcgtattcatctc 1608803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 440 - 883
Target Start/End: Original strand, 7537258 - 7537709
Alignment:
440 gaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccatt 538  Q
    |||||| |||||||||||||||||||  ||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||||||||| ||||    
7537258 gaggaaaactgattatgcagacagtgaattctgcataattctaaagcatttccaagccatttt-tcggccagtttttacctgtaattaaaccagagcatt 7537356  T
539 ttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacattt 638  Q
    | ||||||||| |||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
7537357 tccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacattt 7537456  T
639 ggttaaaattacacaaacgtttgaaattcatcaaaacattaca--------------aagtgtccatgattaaacaactcattacacatcattaaattaa 724  Q
    |||||||||||||||||||||||||||||||| ||||||||||              |||||||||| ||||||||| ||||| |||||||||      |    
7537457 ggttaaaattacacaaacgtttgaaattcatctaaacattacaaagtgtccataattaagtgtccataattaaacaaatcattgcacatcatt------a 7537550  T
725 aattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtc 824  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
7537551 aattaaatccctacttacattcaacgcaaatgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtc 7537650  T
825 gctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||    
7537651 gctatcgtcgcgaataagccaaggcatataacttgctgttttccatgcgtattcgtctc 7537709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 451 - 883
Target Start/End: Complemental strand, 25141096 - 25140669
Alignment:
451 attatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| ||||||| ||||||  |||||||||||||||||||||| ||||| |||||||||    
25141096 attatggagacagtgggttctgcataattctaaagcattttcaagccattttt-cggccaagttttacctgtaattaaaccagaacatttccaaaggcaa 25140998  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaatta 649  Q
     |||| ||||||||  ||||||||| | ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||    
25140997 tataaatcatacaatattgaaactcggccataaacaagaaaaatacaatatcatttacaattgtccataattaaatcaaaccgacatttggttcaaatta 25140898  T
650 cacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaac 749  Q
     |||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||      |||||| |||||||||||||||    
25140897 aacaaacgtttgaaattcatcaacacgttacaaagtgtccataattaaacaactcattacacatcattaaat------taaatccctacttacattcaac 25140804  T
750 gcaattgcatatggaacgaacataca-tatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaagg 848  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| ||||||||||||||    
25140803 gcaattgcatatggaacgaacatacattatataatatattatctttcaccatattccgaaacataaatgcgacgtcgctatcgtcacgaataagccaagg 25140704  T
849 catatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||||||||||||||| |||||| ||||    
25140703 catatagcttgccgttttccatgtgtattcgtctc 25140669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 452 - 883
Target Start/End: Complemental strand, 29667822 - 29667387
Alignment:
452 ttatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    |||||||||||||||||| |||||||||| ||| || ||||||| ||||||| |||||| |||||| |||||||| ||||||| |||||||||||||||     
29667822 ttatgcagacagtgggttttgcataattccaaagcacttccaagccattttt-cggccagtttttatctgtaatttaaccagagcattttcaaaggcaat 29667724  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||| | ||||||| || |||||||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||    
29667723 ataacttatacaacttttaaactcagtcataaacaagtaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatttggttcaaaatac 29667624  T
651 acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa----ttaaaattaaatctctacttacattc 746  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||  |||||| |     | |||||||||| ||||||||||||    
29667623 acaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaacaacacattacaactcattacacatcattaaattaaatccctacttacattc 29667524  T
747 aacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaa 846  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| ||| ||||||||||| ||||||||||||    
29667523 aacgcaattgcatatggaacgaacatacatatataatatattaacttccaccatattccgaaacataaatctgacatcgctatcgtcacgaataagccaa 29667424  T
847 ggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||||||||||||||    
29667423 ggcatatagcttgccgttttccatgcgtattcatctc 29667387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 453 - 883
Target Start/End: Complemental strand, 18610221 - 18609797
Alignment:
453 tatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaa 551  Q
    |||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||| || ||||||| ||||||||||||||| ||||||||||||||| |    
18610221 tatgcagatagtgggttctgcataattctaaagcatttccaagccattttt-cggtcagtttttacatgtaattaaaccagagcattttcaaaggcaata 18610123  T
552 taattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattaca 651  Q
    ||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||  |||||||    
18610122 taaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaatcaaaccgacatctggttcgaattaca 18610023  T
652 caaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgc 751  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||      | |||||||| ||||||||||||| | |    
18610022 caaacgtttgaaattcatcaaaacgttacaaagtgtccataattaaacaactcattacacatgatt------atattaaatccctacttacattcatcac 18609929  T
752 aattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcat 851  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||||||||||||||||||||   |||||||||||||||    
18609928 aattgcatatggaacgaacatacatatataatatataattttccaccatattccgaaacataaatccgacgtcgctatcgtctttaataagccaaggcat 18609829  T
852 atagcttgccgttttccatgcgtattcatctc 883  Q
    ||| |||| |||||||||||| |||| |||||    
18609828 ataacttgtcgttttccatgcatatttatctc 18609797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 382 - 883
Target Start/End: Complemental strand, 28362790 - 28362281
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactg-attatgcagacagtgggttctgcataattc 480  Q
    ||||||||||| |||| ||||||||||||||||| ||||| |||| ||||||||||  ||||||  ||| ||||||||| ||||| ||||||||||||||    
28362790 aggaatttgaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgcagaggaaatctggattatgcaggcagtgtgttctgcataattc 28362691  T
481 taaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacat 580  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||| |||||| || |||| ||||| ||| ||||||||| | |||    
28362690 taaacatttccaagccattttt-cggccagtttttacctgtaattaaaccagagcatttccaaaggtaatataaatcatataacattgaaactcggtcat 28362592  T
581 aaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattac 680  Q
    |||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||||||||| ||||||||||| || |||||||||| |||||| ||||    
28362591 aaacaagaaaaatacaatatcttttacagttgtctaaaattaaattaaaccgacatttggttcaaattacacaaccgattgaaattcaacaaaacgttac 28362492  T
681 aaag--------------tgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaac 766  Q
    ||||              ||||||| |||||||||||||||||||||||||      |||||||||| |||| ||||||| || ||||||||||| || |    
28362491 aaagtgttcataattaaatgtccatcattaaacaactcattacacatcatt------aaattaaatccctacatacattctacacaattgcatatcgatc 28362398  T
767 gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgtttt 866  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||    
28362397 gaacatacatatataatatattatcttccaccatattctgaaacataaattcgacgtcgctatcatcgcaaataagccaaggcatatagcttgccatttt 28362298  T
867 ccatgcgtattcatctc 883  Q
    |||||| ||||||||||    
28362297 ccatgcttattcatctc 28362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 400 - 878
Target Start/End: Original strand, 2051060 - 2051545
Alignment:
400 tgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcat 498  Q
    |||||||||||||||| ||||| ||||||||||| |||  |||||| ||  ||||||||||||||||||| |||||||||||||  ||||| |||| ||     
2051060 tgcagttaactgccgaggaaaacctcggtagttatctgcagaggaaaaca-attatgcagacagtgggttatgcataattctaatgcattttcaag-caa 2051157  T
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||||| |||||| ||||||||||| |||| ||||| ||||||||| |||| ||||||||| |||||||||   ||||| ||||| |||||||||    
2051158 tttttcggccagtttttatctgtaattaaaacagagcatttccaaaggcaatataaatcatacaacattgaaactcgatcataaccaagaaaaatacaat 2051257  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaac--------------attacaaag 684  Q
    |||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||              || |  |||    
2051258 atcttttacagttgtccataattaaatcaaaccgacattttgttcaaattacacaaacgtttgaaattcatcaaaacgataaaaagtgttaataattaag 2051357  T
685 tgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataata 784  Q
    ||| ||| |||||||||||||||||||||||||      |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
2051358 tgttcataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataata 2051451  T
785 tattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc 878  Q
    |||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||    
2051452 tattatcttccaccatatttcgaaacataaatccgacgtcgccatcgtcgcgaataagccaagacatataacttgccgttttccatgcgtattc 2051545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 401 - 725
Target Start/End: Complemental strand, 18351683 - 18351359
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaacatttccaagtcattt 500  Q
    ||||||||||||||| ||||| |||||||||||||||  || |||  |||||||||||||||||||||||||||||||||||||||||||| || |||||    
18351683 gcagttaactgccgaggaaaacctcggtagttaactgccgaagaaatctgattatgcagacagtgggttctgcataattctaaacatttccgagccattt 18351584  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||| |||||||  ||||||| ||||||||    
18351583 tttcggccagtttttacctgtaattaaaccagagcattttcaaaggcaaaataattcatacaagattgaaactcggacataatgaagataagtacaatat 18351484  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaaca 700  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||     
18351483 cttttacaattgttcataattaaattaaaccgacatttggttaaaattaaacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaaact 18351384  T
701 actcattacacatcattaaattaaa 725  Q
    ||| |||||||||||||||||||||    
18351383 acttattacacatcattaaattaaa 18351359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 310 - 669
Target Start/End: Complemental strand, 11840382 - 11840022
Alignment:
310 gttgttcccacattacataag-ctcggccacaccagtaaatgacatttttgccctcttgatagttaaccgtcaaggaatttgaattccgactgcagttaa 408  Q
    |||||||||||||| |||||| ||  | ||||| ||||| |||  ||||||||| |||| |||||||| | | | |  || ||| | || ||||||||||    
11840382 gttgttcccacattgcataaggctgtgacacacgagtaattgatgtttttgcccccttggtagttaactgccgaagttttagaaattcggctgcagttaa 11840283  T
409 ctgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggc 507  Q
    ||| ||| ||||| |||||||||||||||  ||||||  |||||||||||| ||||| | |||||||||||||||| |||||||||| ||||||| ||||    
11840282 ctgtcgaggaaaacctcggtagttaactgccgaggaaatctgattatgcaggcagtgagctctgcataattctaaaacatttccaagccattttt-cggc 11840184  T
508 cattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttac 607  Q
    || ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
11840183 cagtttttacctgtaattaaaccagaacatttccaaaggcaaaataattcatacaacattgaaactcgaacataaacaagataaatacaatatcttttac 11840084  T
608 aattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat 669  Q
    |||||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
11840083 aattgttcataattaaatcaaaccgacatttgattcaaattacacaaacgtttgaaattcat 11840022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 385 - 671
Target Start/End: Complemental strand, 31771797 - 31771510
Alignment:
385 aatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa 484  Q
    |||| ||| |||| ||||||||||||||||| |||||||||||||||||| ||  |||||| |   |||||||||||| ||   ||| ||| ||||||||    
31771797 aattagaaatccggctgcagttaactgccgaggaaaatctcggtagttaattgccgaggaaaataaattatgcagacaatgaactcttcatgattctaaa 31771698  T
485 -catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaa 583  Q
     |||||||||| ||||||||| |||||||||||||| ||||||||  ||| |||||  ||||||||||||||||||||||| ||||||||| ||||||||    
31771697 acatttccaagccattttttcagccattttttacctttaattaaagtagatcatttcgaaaggcaaaataattcatacaacattgaaactcggacataaa 31771598  T
584 caagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
31771597 caagaaaaatacaatattttttacaattgttcataattaaattaaaccgacatttggttcaaattacacaaacgtttgaaattcatca 31771510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 500 - 850
Target Start/End: Original strand, 34230611 - 34230956
Alignment:
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    |||||||||| ||||||||| ||||| |||||||  |||| |||||||||    | || |||||| || | |||||| |||||| || | ||||||| ||    
34230611 ttttcggccagtttttacctataattcaaccagattatttgcaaaggcaattatagtcgtacaacatttatactcagtcataaagaataaaaatacatta 34230710  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacg-tttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||||||||  || | |||||||||||||||||||||| | ||||||||| ||||||    
34230711 tcttttacaattgtctataattaaatcaaaccgacatttcgttaaaattacatgaatgctttgaaattcatcaaaacattaaagagtgtccataattaaa 34230810  T
699 caactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 798  Q
    |||| ||||||||||| ||      |||||||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||| |||    
34230811 caacacattacacatcgtt------aaattaaatctctactaacattctacacagttgcagatggaacgaacatacatatataatatattatcttctacc 34230904  T
799 atattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggca 850  Q
    ||||||||||||||||||| |||||| ||||| ||  |||||||||||||||    
34230905 atattctaaaacataaatcggacgtcactatcctcttgaataagccaaggca 34230956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 429 - 671
Target Start/End: Complemental strand, 3502676 - 3502434
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa 527  Q
    ||||||||| |||||||  |||||||||||| || || | ||||||| |||||||| ||||| |||||| |||||||||| | ||||||||||||||||     
3502676 agttaactgctgaggaaatctgattatgcaggcaatgagctctgcatcattctaaaacatttacaagtc-ttttttcggctagtttttacctgtaattac 3502578  T
528 accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaatta 627  Q
    |||||| |||||  |||||||||| |||||||||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||| |    
3502577 accagagcatttcaaaaggcaaaacaattcatacaacattgaaacttggccataaacaagataaatacaatatcttttacaattgtccataattaaatca 3502478  T
628 aaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
3502477 aaccgacatttggttcaaattacacaaacgtttgaaattcatca 3502434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 451 - 702
Target Start/End: Complemental strand, 26702692 - 26702451
Alignment:
451 attatgcagacagtgggttctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaa 550  Q
    ||||||||||||||||||||||||||||||||||         | |  ||||||| ||| ||||||| |||||||||| |||| ||||| ||||||||      
26702692 attatgcagacagtgggttctgcataattctaaa---------gcccatttttcgaccaatttttacatgtaattaaatcagagcatttccaaaggcagt 26702602  T
551 ataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattac 650  Q
    |||| ||||||||| | |||| || | ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
26702601 ataaatcatacaacatagaaattcggtcataaacaagaaaaatacaatatcttttacaattgtccataattaaa-taaaccgacatttggttcaaattac 26702503  T
651 acaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaac 702  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||    
26702502 acaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaaacaac 26702451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 621 - 883
Target Start/End: Original strand, 2259338 - 2259593
Alignment:
621 taaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaacaactcattacacatcattaaa 720  Q
    ||||| |||||||||||||||| ||| | ||||||   ||||||||||||||||| ||||| ||||||||| |||||||||| |||||||  | ||||||    
2259338 taaatgaaaccgacatttggttcaaaatgcacaaaatgttgaaattcatcaaaacgttacatagtgtccataattaaacaacacattacaacttattaaa 2259437  T
721 ttaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccga 820  Q
    |||||      ||  ||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||| ||||||||||||   ||||||||||| ||    
2259438 ttaaa------tccttacttacattcaacgta-ttgcatatggaacaaacatgcatatataatatattattttccaccatatttcgaaacataaatctga 2259530  T
821 cgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||| |||||   |||||||||| |||||||||||| ||||||| |||||||||||||||    
2259531 cgtcgctttcgtctttaataagccaatgcatatagcttgtcgttttctatgcgtattcatctc 2259593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 500 - 849
Target Start/End: Complemental strand, 20448728 - 20448386
Alignment:
500 ttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaata 599  Q
    |||||||||  |||||| |||||||| ||||||| ||||| || |||||| |||| ||||||| | || | ||| || |||||||||||  |||||| ||    
20448728 ttttcggcctatttttatctgtaattcaaccagagcatttacagaggcaatataactcatacaccatttatacttagtcataaacaagaagaatacatta 20448629  T
600 tcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaac 699  Q
    ||||||||| |||||||||||||||| || ||||||||| |||||||||| |  || ||||||||||||| ||||||||| | ||||||||| |||||||    
20448628 tcttttacagttgtccataattaaatcaatccgacatttcgttaaaattagaggaatgtttgaaattcataaaaacattaaagagtgtccataattaaac 20448529  T
700 aactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacca 799  Q
    ||| |||| || ||||||      | || |||| ||||   |||||| || || ||||| ||| ||| |||| ||||||||||||||||||||| || ||    
20448528 aacacatttcatatcatt------acataaaatatctatcgacattctacacatttgcaaatgtaacaaacacacatatataatatattatctt-caaca 20448436  T
800 tattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggc 849  Q
    ||| |  ||||||||||   |||||||||||||| |||||||||||||||    
20448435 tatacctaaacataaatgaaacgtcgctatcgtcacgaataagccaaggc 20448386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 451 - 623
Target Start/End: Original strand, 2258368 - 2258540
Alignment:
451 attatgcagacagtgggttctgcataattctaaaca-tttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaa 549  Q
    |||||||||||||||  ||||||||||||||||| | ||| |||||||||||| | | ||  |||||| ||||||||||||||| |||||||||||||||    
2258368 attatgcagacagtgaattctgcataattctaaagaattttcaagtcattttt-cagtcagattttacttgtaattaaaccagagcattttcaaaggcaa 2258466  T
550 aataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaa 623  Q
     |||| ||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
2258467 tataactcatacaacatttaaactcagtcataaacaagaaaaatacaatatcttttacaattgtccataattaa 2258540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 501 - 642
Target Start/End: Original strand, 8304570 - 8304711
Alignment:
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    ||||||||| ||||||| ||||||||||||||| ||||| ||||| ||| |||  ||||||||| ||   |||||| ||||||||||| ||||||| |||    
8304570 tttcggccagtttttacatgtaattaaaccagagcatttccaaagccaatatacctcatacaacatttgcactcagtcataaacaagaaaaatacattat 8304669  T
601 cttttacaattgtccataattaaattaaaccgacatttggtt 642  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
8304670 cttttacaattgtccataattaaatcaaaccgacatttggtt 8304711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 510 - 691
Target Start/End: Complemental strand, 20439936 - 20439755
Alignment:
510 ttttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaa 609  Q
    |||||||||||| ||| ||||||| ||||| || |||||| | || ||||||| | || | ||| || |||||||||||  |||||| |||||||||||     
20439936 ttttttacctgttattcaaccagagcatttccagaggcaatacaactcatacaccatttatacttagtcataaacaagaggaatacattatcttttacag 20439837  T
610 ttgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccat 691  Q
    |||||||||||||||| || ||||||||| ||||||||||||  || ||||||||||||| ||||||||| | |||||||||    
20439836 ttgtccataattaaatcaatccgacattttgttaaaattacaggaatgtttgaaattcatgaaaacattaaagagtgtccat 20439755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 511 - 679
Target Start/End: Original strand, 19129120 - 19129285
Alignment:
511 tttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaat 610  Q
    ||||||||||||||||||||| | ||||| || | |||| | || ||| ||| | || | |||||| |||||||||||   || || ||||||||||| |    
19129120 tttttacctgtaattaaaccacaacatttccagatgcaataaaactcacacaccatttatactcagtcataaacaaga---atgcattatcttttacagt 19129216  T
611 tgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacatta 679  Q
    ||||||||||||||| || | ||||||| ||| ||||||||| || |||||||||||||||||||||||    
19129217 tgtccataattaaatcaatctgacatttcgttgaaattacacgaatgtttgaaattcatcaaaacatta 19129285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 510 - 679
Target Start/End: Complemental strand, 20436228 - 20436059
Alignment:
510 ttttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttacaa 609  Q
    |||||||||||| ||| ||||||| ||||| || ||  || | |||||||||| | || | ||| || |||||||||||  |||||| |||||||||||     
20436228 ttttttacctgttattcaaccagagcatttccagagaaaatacaattcatacaccatttatacttagtcataaacaagaggaatacattatcttttacag 20436129  T
610 ttgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacatta 679  Q
    |||||||| ||||||| || |||||||||  |||||||||||  || ||||||||||||| |||||||||    
20436128 ttgtccatgattaaatcaatccgacattttattaaaattacatgaatgtttgaaattcatgaaaacatta 20436059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 847
Target Start/End: Original strand, 19129549 - 19129642
Alignment:
755 tgcatatggaac-gaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaag 847  Q
    |||| ||||||| ||||| |||||||||||||||||| ||| | ||||| |  ||||||||||   ||||||| |||||| |||||||||||||    
19129549 tgcagatggaacagaacacacatatataatatattatattcaatcatatgcctaaacataaatgaaacgtcgcaatcgtcacgaataagccaag 19129642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 27616748 - 27616784
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||||||||||| |||||||||||||||    
27616748 gcagttaactgccgaagaaaacctcggtagttaactg 27616784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 6204853 - 6204896
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
6204853 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 6204896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 11691820 - 11691863
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
11691820 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 11691863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 22305134 - 22305177
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
22305134 tccggctgcagttaactgccgaggaaaacctcggtagttaactg 22305177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 437
Target Start/End: Original strand, 31146387 - 31146442
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||| |||| ||||||||||||| ||| |||||  ||||||||||||||    
31146387 aggaatttgaaatccggctgcagttaactgtcgaggaaaacatcggtagttaactg 31146442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 437
Target Start/End: Complemental strand, 32643592 - 32643525
Alignment:
370 agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||| | |||||||||  || |||| ||||||||||||| ||| ||||| |||||||||||||||    
32643592 agttaactgccaaggaattaaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactg 32643525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 17596972 - 17597009
Alignment:
399 ctgcagttaactgccgaagaaaatctcggtagttaact 436  Q
    ||||||||||||||||| ||||||||||| ||||||||    
17596972 ctgcagttaactgccgaggaaaatctcggcagttaact 17597009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 24088825 - 24088784
Alignment:
402 cagttaactgccgaagaaaatctcggtagttaactgttgagg 443  Q
    |||||||||| ||| |||||||||||||||||||||| ||||    
24088825 cagttaactgtcgaggaaaatctcggtagttaactgtcgagg 24088784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 438
Target Start/End: Complemental strand, 24721998 - 24721961
Alignment:
401 gcagttaactgccgaagaaaatctcggtagttaactgt 438  Q
    ||||||||||||||| ||||| ||||||||||||||||    
24721998 gcagttaactgccgaggaaaacctcggtagttaactgt 24721961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 277; Significance: 1e-154; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 370 - 777
Target Start/End: Original strand, 8201 - 8602
Alignment:
370 agttaaccgtcaaggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggtt 469  Q
    ||||||| | ||||||||||||| ||||  ||||||||||||| |||||||| |||||||||||||||   ||||| |||||||||||||||||||||||    
8201 agttaactgccaaggaatttgaaatccggatgcagttaactgctgaagaaaacctcggtagttaactgccaaggaaaactgattatgcagacagtgggtt 8300  T
470 ctgcataattctaaacatttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttga 569  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||||| |||||||||||||||||||||||  ||||    
8301 ctgcataattctaaacatttccaagccattttttcggccagtttttacctgtaattaaaccaaagcatttccaaaggcaaaataattcatacaagattga 8400  T
570 aactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcat 669  Q
    ||||| | ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
8401 aactcgggcataatcaagataagtacaatatcttttacaattgttcataattaaattaaaccaacatttggttaaaattaaacaaacgtttgaaattcat 8500  T
670 caaaacattacaaagtgtccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaa 769  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||      |||||||||| |||||||||||||||||||||||||||||||||||    
8501 caaaacattacaaagtgtccataattaaacaactcattacacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgaa 8594  T
770 catacata 777  Q
    ||||||||    
8595 catacata 8602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 402 - 801
Target Start/End: Complemental strand, 20151 - 19743
Alignment:
402 cagttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattt 500  Q
    |||||||||| ||| ||||  |||||||||| ||||  |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||   |||    
20151 cagttaactgtcgaggaaatcctcggtagtttactgccgaggaaaactgattatgcagacagtgggttctgcataattctaaagcatttccaagcttttt 20052  T
501 tttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatat 600  Q
    |||||| || ||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| |||||||||||    
20051 tttcggtcagtttttacctgtaattaaaccagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatat 19952  T
601 cttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattaca--------------aagtg 686  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||              |||||    
19951 cttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaacgtttaaaattcatcaaaacgttacaaagtggccgtaattaagtg 19852  T
687 tccatgattaaacaactcattacacatcattaaattaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatata 786  Q
    | ||| ||||||||||||||| |||||||||      |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
19851 ttcataattaaacaactcattgcacatcatt------aaattaaatccctacttacattcaacgcaattgcatatggaacgagcatacatatataatata 19758  T
787 ttatcttccaccata 801  Q
    |||||||||||||||    
19757 ttatcttccaccata 19743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 807 - 883
Target Start/End: Complemental strand, 19574 - 19498
Alignment:
807 aaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
19574 aaacataaatctgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctc 19498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 152; Significance: 5e-80; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 499 - 880
Target Start/End: Original strand, 21780 - 22144
Alignment:
499 tttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaat 598  Q
    ||||||||||| ||||||||||||||||||||||| ||||| |||| |||| |||| ||||||||  |||||||||            || |||||||||    
21780 tttttcggccagtttttacctgtaattaaaccagagcatttccaaaagcaatataaatcatacaatattgaaactc------------gaaaaatacaat 21867  T
599 atcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatcaaaacattacaaagtgtccatgattaaa 698  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||    
21868 atcttttacaattgtccataattaaatcaaaccgacatttggttcaaattacacaaaagtttgaaattcatcaaaacgttaaaaagtgtccataattaaa 21967  T
699 caactcattacacatcattaaa----ttaaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttc 794  Q
    |||| |||||||  |||||| |     | | |||||||| ||||||||||||| | ||||||||||||||||||||||||||||||         | |||    
21968 caacacattacaactcattacacatcattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatat---------ttttc 22058  T
795 caccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcat 880  Q
    |||||||||| ||||||||||| |||||||||||| |||   ||||||||||| |||||| |||| | ||||||||||||||||||    
22059 caccatattccaaaacataaattcgacgtcgctattgtctttaataagccaagacatataacttgtcattttccatgcgtattcat 22144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 147; Significance: 5e-77; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 403 - 671
Target Start/End: Complemental strand, 236272 - 236006
Alignment:
403 agttaactgccgaagaaaatctcggtagttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcatttt 501  Q
    |||||||||| || |||||  ||||||||||||||  ||||||  ||||||  |||||||||| | ||||||| |||||||| |||||||||  | ||||    
236272 agttaactgcagaggaaaacttcggtagttaactgccgaggaaatctgatt--gcagacagtgagctctgcatcattctaaaacatttccaaacc-tttt 236176  T
502 ttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatc 601  Q
    |||| ||| ||||||||||||||||||||||| |||||  |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
236175 ttcgaccagtttttacctgtaattaaaccagagcatttcgaaaggcaaaacaattcatacaatattgaaactcagacataaacaagataaatacaatatc 236076  T
602 ttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgtttgaaattcatca 671  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||    
236075 ttttacaattgtccataattaaatcaaatcgacatttggttcaaattacacaaacgtttgaaattcatca 236006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 131; Significance: 2e-67; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 462 - 671
Target Start/End: Original strand, 12497 - 12706
Alignment:
462 agtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaaaccagaccattttcaaaggcaaaataattcata 560  Q
    |||| ||| ||||| |||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||| |||||  ||| |||||| ||||||||    
12497 agtgagttttgcatcattctaaaacatttccaagcc-ttttttcggccagtttttacctgtaattaaaccagagcatttcgaaaagcaaaacaattcata 12595  T
561 caacgttgaaactcagacataaacaagataaatacaatatcttttacaattgtccataattaaattaaaccgacatttggttaaaattacacaaacgttt 660  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||    
12596 caacattgaaactcggacataaacaagataaatacaatatcttttacaattgtccataattaaatcaaaccgacattttgtttaaattacacaaacgttt 12695  T
661 gaaattcatca 671  Q
     ||||||||||    
12696 aaaattcatca 12706  T

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Target: scaffold0199; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 12435 - 12392
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||    
12435 tccggctgcagttaactgccgatgaaaacctcggtagttaactg 12392  T

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Target: scaffold0169 (Bit Score: 129; Significance: 3e-66; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 735 - 883
Target Start/End: Complemental strand, 10976 - 10828
Alignment:
735 ctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcgctatcgtcg 834  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||     
10976 ctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgtca 10877  T
835 cgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
10876 cgaataagccaaggcatatagcttgctgttttccatgcgtattcatctc 10828  T

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Target: scaffold0169; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 429 - 608
Target Start/End: Complemental strand, 1695 - 1517
Alignment:
429 agttaactgttgaggaagactgattatgcagacagtgggttctgcataattctaaa-catttccaagtcattttttcggccattttttacctgtaattaa 527  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||||||||||||| | |||||||||| ||||||| |||||| |||||||||||||||||    
1695 agttaactgctgaggaaaaca-attatgcagacagtgggttctgcataattctatagcatttccaagccattttt-cggccagtttttacctgtaattaa 1598  T
528 accagaccattttcaaaggcaaaataattcatacaacgttgaaactcagacataaacaagataaatacaatatcttttaca 608  Q
    |||||| ||||| ||||||||| |||| ||||||||| ||||||||| | ||||||||||| |||||||||||||||||||    
1597 accagagcatttccaaaggcaatataaatcatacaacattgaaactcggtcataaacaagaaaaatacaatatcttttaca 1517  T

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Target: scaffold0794 (Bit Score: 110; Significance: 6e-55; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 726 - 883
Target Start/End: Complemental strand, 1472 - 1315
Alignment:
726 attaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattctaaaacataaatccgacgtcg 825  Q
    ||||||||  |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||    
1472 attaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaacataaatccgacgtcg 1373  T
826 ctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 883  Q
    |||| |||   |||||| ||||||||||||||||||||||||||||||||||||||||    
1372 ctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctc 1315  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 17410 - 17355
Alignment:
382 aggaatttgaattccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||| |||| ||||||||||||||||| ||||  |||||||||||||||    
17410 aggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactg 17355  T

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Target: scaffold0184 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 18340 - 18297
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||    
18340 tccgactgcagtttactgtcgaagaaaacctcggtagttaactg 18297  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 54504 - 54547
Alignment:
394 tccgactgcagttaactgccgaagaaaatctcggtagttaactg 437  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||    
54504 tccgactgcagtttactgtcgaagaaaacctcggtagttaactg 54547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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