View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11564_high_3 (Length: 687)

Name: NF11564_high_3
Description: NF11564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11564_high_3
NF11564_high_3
[»] chr7 (51 HSPs)
chr7 (175-433)||(43567619-43567877)
chr7 (510-680)||(43567950-43568120)
chr7 (21-144)||(43567499-43567623)
chr7 (22-163)||(8380414-8380556)
chr7 (24-163)||(29034660-29034800)
chr7 (24-166)||(5240328-5240471)
chr7 (32-163)||(42222194-42222326)
chr7 (24-158)||(27053489-27053624)
chr7 (26-160)||(49069531-49069666)
chr7 (21-158)||(24359701-24359839)
chr7 (21-133)||(40763253-40763365)
chr7 (27-161)||(41188785-41188920)
chr7 (26-163)||(8292718-8292856)
chr7 (29-179)||(22521539-22521694)
chr7 (25-163)||(36279095-36279231)
chr7 (33-162)||(7322958-7323088)
chr7 (23-113)||(48454817-48454907)
chr7 (26-157)||(40066915-40067045)
chr7 (23-155)||(5347967-5348097)
chr7 (21-150)||(8258636-8258761)
chr7 (24-136)||(30538476-30538585)
chr7 (32-161)||(46478560-46478689)
chr7 (32-136)||(43958087-43958191)
chr7 (21-163)||(1910217-1910359)
chr7 (34-132)||(3681699-3681797)
chr7 (66-165)||(29687447-29687547)
chr7 (38-134)||(31626051-31626147)
chr7 (32-156)||(1907593-1907717)
chr7 (46-137)||(46042748-46042838)
chr7 (43-136)||(40194827-40194920)
chr7 (61-160)||(30388693-30388793)
chr7 (21-136)||(22707050-22707164)
chr7 (71-163)||(10575802-10575895)
chr7 (69-156)||(16082473-16082561)
chr7 (25-112)||(35003630-35003716)
chr7 (63-118)||(41141043-41141098)
chr7 (45-99)||(31360309-31360363)
chr7 (49-133)||(32204186-32204270)
chr7 (72-166)||(44296945-44297040)
chr7 (104-161)||(29959042-29959100)
chr7 (64-105)||(4686079-4686120)
chr7 (65-134)||(6548533-6548602)
chr7 (45-117)||(40774259-40774331)
chr7 (26-105)||(35239785-35239864)
chr7 (64-118)||(16931910-16931963)
chr7 (64-118)||(16937293-16937346)
chr7 (32-118)||(46423377-46423463)
chr7 (91-163)||(16957639-16957711)
chr7 (45-118)||(18800166-18800238)
chr7 (45-105)||(3720131-3720191)
chr7 (48-138)||(42291279-42291371)
[»] chr5 (46 HSPs)
chr5 (21-163)||(35653248-35653391)
chr5 (21-162)||(25017284-25017426)
chr5 (21-163)||(4421957-4422100)
chr5 (21-163)||(39567876-39568019)
chr5 (21-163)||(16315527-16315668)
chr5 (51-160)||(12914151-12914261)
chr5 (24-163)||(34546751-34546891)
chr5 (21-136)||(43414057-43414172)
chr5 (32-160)||(3639079-3639207)
chr5 (25-133)||(1759821-1759929)
chr5 (21-136)||(338757-338872)
chr5 (31-163)||(27823235-27823365)
chr5 (30-157)||(5151468-5151596)
chr5 (21-165)||(8410113-8410258)
chr5 (21-157)||(28143116-28143253)
chr5 (25-160)||(35945222-35945358)
chr5 (21-132)||(37243852-37243962)
chr5 (50-163)||(13951258-13951372)
chr5 (32-161)||(12068178-12068307)
chr5 (40-163)||(25568304-25568428)
chr5 (21-163)||(4962510-4962652)
chr5 (25-98)||(15915871-15915944)
chr5 (25-128)||(1479133-1479236)
chr5 (45-163)||(39167569-39167687)
chr5 (32-137)||(10017626-10017728)
chr5 (21-133)||(10406792-10406903)
chr5 (59-162)||(39692984-39693088)
chr5 (31-118)||(678469-678556)
chr5 (24-107)||(40099362-40099444)
chr5 (63-118)||(39069311-39069366)
chr5 (49-133)||(6823773-6823858)
chr5 (96-158)||(4838259-4838322)
chr5 (48-107)||(5058775-5058834)
chr5 (30-138)||(27535096-27535202)
chr5 (70-137)||(39335473-39335540)
chr5 (20-118)||(38610284-38610382)
chr5 (45-118)||(3015067-3015140)
chr5 (70-117)||(10163668-10163715)
chr5 (30-117)||(17168696-17168783)
chr5 (71-105)||(24288519-24288553)
chr5 (71-105)||(24373668-24373702)
chr5 (69-118)||(12349585-12349634)
chr5 (91-140)||(16899635-16899684)
chr5 (48-156)||(19894798-19894907)
chr5 (64-105)||(28599690-28599731)
chr5 (90-160)||(15915014-15915083)
[»] chr1 (49 HSPs)
chr1 (21-177)||(34874527-34874683)
chr1 (21-161)||(49508724-49508864)
chr1 (21-161)||(22346227-22346368)
chr1 (25-160)||(43433751-43433887)
chr1 (24-176)||(41147471-41147624)
chr1 (24-163)||(27209714-27209854)
chr1 (26-156)||(49901906-49902037)
chr1 (21-170)||(24140739-24140888)
chr1 (21-135)||(40845253-40845367)
chr1 (26-133)||(50295428-50295535)
chr1 (31-163)||(4940740-4940873)
chr1 (21-129)||(11385800-11385908)
chr1 (33-166)||(6170553-6170687)
chr1 (25-160)||(932151-932287)
chr1 (24-163)||(11385954-11386094)
chr1 (33-155)||(33929947-33930070)
chr1 (21-136)||(42607314-42607429)
chr1 (32-154)||(47655372-47655495)
chr1 (25-161)||(2125701-2125838)
chr1 (21-161)||(7190465-7190606)
chr1 (21-161)||(28850900-28851040)
chr1 (30-136)||(52396444-52396549)
chr1 (59-162)||(47895308-47895412)
chr1 (25-130)||(32213883-32213988)
chr1 (24-158)||(29966800-29966936)
chr1 (33-158)||(28277484-28277610)
chr1 (24-163)||(45721728-45721865)
chr1 (45-176)||(50154432-50154565)
chr1 (33-155)||(26469584-26469707)
chr1 (21-163)||(31975460-31975603)
chr1 (21-163)||(14331810-14331953)
chr1 (21-163)||(44359662-44359805)
chr1 (32-133)||(4656020-4656121)
chr1 (21-160)||(43168117-43168257)
chr1 (24-136)||(44286873-44286985)
chr1 (29-118)||(17402967-17403056)
chr1 (45-161)||(48938611-48938727)
chr1 (21-118)||(16691313-16691410)
chr1 (24-110)||(5945447-5945533)
chr1 (45-118)||(8892785-8892858)
chr1 (61-133)||(30222624-30222697)
chr1 (32-133)||(40920189-40920292)
chr1 (50-118)||(41898878-41898946)
chr1 (25-163)||(8244070-8244200)
chr1 (49-156)||(51424137-51424245)
chr1 (39-105)||(27210757-27210823)
chr1 (21-134)||(41492912-41493024)
chr1 (240-293)||(2447183-2447236)
chr1 (86-118)||(46296240-46296272)
[»] chr4 (68 HSPs)
chr4 (21-161)||(35808389-35808530)
chr4 (24-158)||(26040356-26040491)
chr4 (21-163)||(55669712-55669855)
chr4 (21-162)||(30475399-30475541)
chr4 (21-163)||(2362602-2362747)
chr4 (21-161)||(23765553-23765694)
chr4 (21-160)||(31754914-31755054)
chr4 (33-163)||(33951673-33951804)
chr4 (21-161)||(34316715-34316857)
chr4 (21-164)||(31168106-31168250)
chr4 (25-163)||(45688716-45688855)
chr4 (24-161)||(10100109-10100247)
chr4 (21-162)||(41956206-41956348)
chr4 (32-163)||(51266897-51267029)
chr4 (50-161)||(19328950-19329062)
chr4 (21-160)||(32131118-32131258)
chr4 (32-136)||(34016626-34016730)
chr4 (59-163)||(47188696-47188801)
chr4 (21-160)||(20811239-20811379)
chr4 (24-163)||(26831782-26831921)
chr4 (21-136)||(27839299-27839414)
chr4 (32-161)||(50514618-50514747)
chr4 (21-145)||(35675183-35675308)
chr4 (26-162)||(54339087-54339223)
chr4 (31-102)||(19876186-19876257)
chr4 (26-161)||(40436056-40436192)
chr4 (21-113)||(31487745-31487837)
chr4 (59-163)||(45088043-45088145)
chr4 (24-94)||(51290473-51290543)
chr4 (44-156)||(52341581-52341694)
chr4 (21-155)||(30617930-30618065)
chr4 (25-163)||(31494658-31494797)
chr4 (85-162)||(9693528-9693606)
chr4 (54-163)||(15986239-15986349)
chr4 (26-161)||(53566948-53567087)
chr4 (21-92)||(46695955-46696026)
chr4 (32-165)||(48513590-48513724)
chr4 (32-105)||(35511184-35511257)
chr4 (24-156)||(39158322-39158455)
chr4 (36-163)||(20456542-20456670)
chr4 (45-112)||(20435807-20435874)
chr4 (45-163)||(51018396-51018515)
chr4 (44-118)||(3769832-3769906)
chr4 (64-118)||(46823491-46823545)
chr4 (31-135)||(13498120-13498224)
chr4 (21-117)||(31010420-31010516)
chr4 (64-116)||(36486722-36486774)
chr4 (26-101)||(9693380-9693454)
chr4 (63-105)||(11996138-11996180)
chr4 (45-162)||(52895698-52895816)
chr4 (69-133)||(35927315-35927379)
chr4 (21-75)||(16559987-16560041)
chr4 (89-162)||(23690980-23691054)
chr4 (21-107)||(29722074-29722160)
chr4 (50-100)||(40593638-40593688)
chr4 (79-155)||(1457586-1457663)
chr4 (71-104)||(1801635-1801668)
chr4 (29-138)||(29462800-29462909)
chr4 (64-101)||(49483133-49483170)
chr4 (89-129)||(966590-966630)
chr4 (29-57)||(19328748-19328776)
chr4 (21-57)||(22665762-22665798)
chr4 (45-116)||(23260725-23260797)
chr4 (39-118)||(27545881-27545960)
chr4 (21-85)||(31463286-31463350)
chr4 (45-105)||(42627116-42627176)
chr4 (71-107)||(53411838-53411874)
chr4 (32-128)||(53484624-53484720)
[»] chr3 (41 HSPs)
chr3 (21-163)||(36730146-36730289)
chr3 (24-160)||(8715498-8715634)
chr3 (24-160)||(9067385-9067521)
chr3 (21-164)||(32415541-32415685)
chr3 (24-163)||(51817308-51817448)
chr3 (21-163)||(44570379-44570522)
chr3 (26-155)||(4759848-4759978)
chr3 (21-161)||(29915568-29915709)
chr3 (21-161)||(29964721-29964862)
chr3 (21-161)||(37509086-37509227)
chr3 (47-161)||(52570755-52570872)
chr3 (21-161)||(46317461-46317602)
chr3 (25-163)||(8847449-8847588)
chr3 (21-161)||(10854834-10854979)
chr3 (33-163)||(12051011-12051142)
chr3 (21-163)||(35306305-35306448)
chr3 (26-152)||(44695669-44695796)
chr3 (21-163)||(25102315-25102457)
chr3 (37-160)||(12905292-12905415)
chr3 (21-129)||(18780-18888)
chr3 (25-155)||(45899540-45899672)
chr3 (24-105)||(1803920-1804001)
chr3 (62-160)||(41345951-41346050)
chr3 (77-162)||(31647278-31647364)
chr3 (44-118)||(49976157-49976231)
chr3 (24-135)||(34060761-34060873)
chr3 (46-129)||(18946-19029)
chr3 (53-161)||(20227405-20227514)
chr3 (24-96)||(48136719-48136790)
chr3 (65-134)||(34750294-34750363)
chr3 (26-118)||(48313836-48313928)
chr3 (66-133)||(11316970-11317037)
chr3 (43-156)||(11675293-11675405)
chr3 (49-138)||(21324515-21324603)
chr3 (24-65)||(41346346-41346387)
chr3 (39-102)||(13647047-13647110)
chr3 (39-105)||(39436497-39436563)
chr3 (21-118)||(12060052-12060149)
chr3 (44-116)||(26850510-26850582)
chr3 (70-112)||(4298362-4298404)
chr3 (48-128)||(39974826-39974906)
[»] chr2 (48 HSPs)
chr2 (27-163)||(6999175-6999312)
chr2 (21-163)||(862562-862705)
chr2 (25-163)||(27495096-27495235)
chr2 (21-163)||(39401528-39401670)
chr2 (21-175)||(16361524-16361682)
chr2 (21-136)||(765143-765258)
chr2 (32-163)||(2966513-2966645)
chr2 (26-161)||(44299679-44299815)
chr2 (33-163)||(41436451-41436582)
chr2 (25-162)||(39085789-39085927)
chr2 (21-161)||(33726355-33726496)
chr2 (23-159)||(35445285-35445423)
chr2 (21-163)||(17056051-17056193)
chr2 (21-163)||(17068498-17068640)
chr2 (32-161)||(17118377-17118506)
chr2 (21-133)||(33864359-33864471)
chr2 (21-163)||(17074481-17074623)
chr2 (21-136)||(17603812-17603927)
chr2 (24-157)||(1321147-1321281)
chr2 (21-163)||(23685656-23685788)
chr2 (45-157)||(44173099-44173211)
chr2 (21-163)||(11659235-11659378)
chr2 (37-136)||(13997913-13998012)
chr2 (29-163)||(17095068-17095202)
chr2 (32-163)||(9201499-9201630)
chr2 (77-158)||(15004905-15004987)
chr2 (23-163)||(12695231-12695373)
chr2 (34-156)||(34334167-34334290)
chr2 (88-162)||(11445379-11445454)
chr2 (32-146)||(2239572-2239687)
chr2 (33-116)||(43140328-43140411)
chr2 (32-118)||(34220650-34220736)
chr2 (46-104)||(37230253-37230311)
chr2 (32-137)||(2805381-2805488)
chr2 (63-118)||(747526-747581)
chr2 (37-161)||(464770-464896)
chr2 (44-156)||(2136416-2136529)
chr2 (50-101)||(11445313-11445364)
chr2 (63-98)||(31911200-31911235)
chr2 (63-118)||(34512665-34512720)
chr2 (74-112)||(10001849-10001887)
chr2 (48-118)||(10522810-10522880)
chr2 (67-156)||(29260167-29260257)
chr2 (45-118)||(40798342-40798413)
chr2 (50-156)||(41890141-41890240)
chr2 (45-118)||(32949526-32949598)
chr2 (32-116)||(8327001-8327085)
chr2 (45-112)||(34392568-34392636)
[»] chr8 (38 HSPs)
chr8 (21-180)||(19389303-19389462)
chr8 (32-163)||(8018733-8018866)
chr8 (24-157)||(45337983-45338117)
chr8 (32-136)||(25249345-25249449)
chr8 (24-162)||(10694781-10694920)
chr8 (31-163)||(4989909-4990039)
chr8 (37-147)||(18068951-18069062)
chr8 (21-136)||(21016235-21016350)
chr8 (21-155)||(21016050-21016185)
chr8 (27-136)||(6939159-6939268)
chr8 (38-136)||(26195383-26195481)
chr8 (46-162)||(6433518-6433635)
chr8 (33-154)||(34713924-34714048)
chr8 (33-164)||(37433238-37433369)
chr8 (29-156)||(3174436-3174568)
chr8 (29-156)||(7532767-7532893)
chr8 (38-156)||(14855394-14855513)
chr8 (33-163)||(26672763-26672894)
chr8 (31-161)||(44874308-44874431)
chr8 (21-113)||(5129449-5129541)
chr8 (21-106)||(35930167-35930252)
chr8 (39-137)||(26892786-26892884)
chr8 (25-162)||(38869978-38870116)
chr8 (21-118)||(11332787-11332884)
chr8 (21-118)||(34421311-34421408)
chr8 (39-111)||(6841707-6841779)
chr8 (77-133)||(33741523-33741579)
chr8 (21-156)||(39972145-39972281)
chr8 (45-118)||(31596438-31596511)
chr8 (72-166)||(20212433-20212528)
chr8 (21-63)||(18808941-18808983)
chr8 (63-112)||(8810524-8810573)
chr8 (91-138)||(30351590-30351637)
chr8 (70-137)||(37922972-37923038)
chr8 (21-82)||(19976483-19976545)
chr8 (45-146)||(24304932-24305033)
chr8 (97-156)||(5300203-5300263)
chr8 (74-118)||(17320000-17320044)
[»] scaffold0062 (3 HSPs)
scaffold0062 (29-163)||(16773-16907)
scaffold0062 (29-163)||(26941-27075)
scaffold0062 (29-163)||(37107-37241)
[»] chr6 (25 HSPs)
chr6 (21-163)||(5578247-5578390)
chr6 (26-163)||(12191466-12191604)
chr6 (48-163)||(7875201-7875317)
chr6 (26-136)||(6866916-6867026)
chr6 (24-163)||(10855406-10855545)
chr6 (24-163)||(26572078-26572213)
chr6 (21-113)||(29692334-29692426)
chr6 (48-163)||(7880447-7880563)
chr6 (30-163)||(16437592-16437718)
chr6 (26-162)||(7274212-7274349)
chr6 (25-161)||(8324101-8324238)
chr6 (26-155)||(31220325-31220455)
chr6 (29-134)||(28014638-28014743)
chr6 (21-94)||(32786259-32786331)
chr6 (44-161)||(12175535-12175652)
chr6 (45-118)||(27127524-27127597)
chr6 (46-145)||(14232509-14232609)
chr6 (96-163)||(32786042-32786110)
chr6 (24-161)||(6507385-6507523)
chr6 (32-122)||(12775125-12775215)
chr6 (71-163)||(29964274-29964367)
chr6 (73-161)||(34780023-34780112)
chr6 (26-161)||(12226329-12226465)
chr6 (70-133)||(21186059-21186122)
chr6 (47-122)||(12769223-12769294)
[»] scaffold0002 (1 HSPs)
scaffold0002 (21-156)||(392121-392261)
[»] scaffold0809 (1 HSPs)
scaffold0809 (26-95)||(4268-4337)
[»] scaffold0144 (1 HSPs)
scaffold0144 (45-163)||(39562-39679)
[»] scaffold0169 (1 HSPs)
scaffold0169 (70-118)||(9050-9098)
[»] scaffold0161 (1 HSPs)
scaffold0161 (22-106)||(8725-8809)


Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 175 - 433
Target Start/End: Original strand, 43567619 - 43567877
Alignment:
Q  175 ctttttaaaatgatgaaatctgtttctatctctcacaattaactctacatcaaaaaccttctaggtaaacttggtagctgtgtgacaatcttcacagaca 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  43567619 ctttttaaaatgatgaaatctgtttctatctctcacaattaactctacatcaaaaaccttcgagataaacttggtagctgtgtgacaatcttcacagaca 43567718  T
Q  275 cgcaagtttttcacaatccgaataggcccaggagcttgaatcttcataattccataggaaatggccagtttctcaccatgcctgtgaagtgcatcttctt 374  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  43567719 cgcaagtttttcacaatccgaatagtcccaggagcttgaatcttcataattccataggcaatggccagtttctcactatgcctgtgaagtgcatcttctt 43567818  T
Q  375 tttcctcctcatctatgtcaaacaatgcctcactagtatttcccatgtaccctgctaac 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43567819 tttcctcctcatctatgtcaaacaatgcctcactagtatttcccatgtaccctgctaac 43567877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 510 - 680
Target Start/End: Original strand, 43567950 - 43568120
Alignment:
Q  510 gtaaactcatgagtttttccgtctatctcaatgagactatatccaggttgttttctaacccctttttccttcattaatcttctcatgacagtagcatctt 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43567950 gtaaactcatgagtttttccgtctatctcaatgagactatatccaggttgttttctaacccctttttccttcattaatcttctcatgacagtagcatctt 43568049  T
Q  610 tccacttgtttgtacgcgcatatatgttcgacagcaacacataataaccactatgttctggtttcatctca 680  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43568050 tccacttgtttgtacgcgcatatatgttcgacagcaacgcataataaccactatgttctggtttcatctca 43568120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 43567499 - 43567623
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  43567499 tgcccttggggcattggataaggagataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttg 43567598  T
Q  121 aaaccaatgcaaacat-atactttt 144  Q
    |||||||||||||||| ||||||||    
T  43567599 aaaccaatgcaaacatgatactttt 43567623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 8380556 - 8380414
Alignment:
Q  22 gcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcga 121  Q
    |||||||||| |||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| |||| ||    
T  8380556 gcccttggggtattggataaggggataaaaataaaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttga 8380457  T
Q  122 aaccaatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  8380456 aaccaatgaaaacatactacttttggcttccttaaccattgcc 8380414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 29034800 - 29034660
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  29034800 ccttgaggcattggataaggggataaaaatataaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaa 29034701  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    | |||||||||||  |||||||||||| |||||||||||||    
T  29034700 ctaatgcaaacatgctacttttggctttcttaaccattgcc 29034660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 5240328 - 5240471
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| || | ||||    
T  5240328 ccttgaggcattggataaagggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaa 5240427  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcctta 166  Q
    |||||||||||||  |||||||||||||||||||||||| ||||    
T  5240428 ccaatgcaaacatgctacttttggcttccttaaccattgtctta 5240471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 42222326 - 42222194
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||    
T  42222326 cattagataaggggataaaaatagaaatatggtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaataca 42222227  T
Q  132 aacat-atacttttggcttccttaaccattgcc 163  Q
    |||||  ||||||| | ||||||||||||||||    
T  42222226 aacatgttacttttagtttccttaaccattgcc 42222194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 27053489 - 27053624
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||| ||||||||||||| ||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  27053489 ccttagggcattggataaagggataaaaatagaaatatagcatcagaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaa 27053588  T
Q  124 ccaatgcaaaca-tatacttttggcttccttaacca 158  Q
    |||||||||||| | ||||||||| |||||||||||    
T  27053589 ccaatgcaaacattctacttttggtttccttaacca 27053624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 49069666 - 49069531
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  49069666 ttggggcattggataagaagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatctaactttttaaaaatcaatatattgttgaaacc 49069567  T
Q  126 aatgcaaacat-atacttttggcttccttaaccatt 160  Q
    ||| |||||||  ||||||||| |||||||||||||    
T  49069566 aatacaaacatgttacttttggtttccttaaccatt 49069531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 24359701 - 24359839
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||| | ||||||||||| ||||| ||||||||||||||||||||| | ||||| |||| |    
T  24359701 tgcccttcgggtattggataaggggataaaaatagaaatatagcaatggaaaatggtaaaaagggataaatttaactttttaaaagttaaaatgttgttg 24359800  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaacca 158  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  24359801 aaaccaatgcaaacatgctacttttggcttccttaacca 24359839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 40763365 - 40763253
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||||||||||||| | ||||| |||| |    
T  40763365 tgcccttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttg 40763266  T
Q  121 aaaccaatgcaaa 133  Q
    |||||||||||||    
T  40763265 aaaccaatgcaaa 40763253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 41188785 - 41188920
Alignment:
Q  27 tggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacca 126  Q
    ||||||||| |||||| ||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||  ||| |||| ||    
T  41188785 tggggcatttgataagaggataaaaatataaatatagcattggaaaatggtgaaaggtgataaatttaactttttaaaagtcaaaatgctgttgaaatca 41188884  T
Q  127 atgcaaacata-tacttttggcttccttaaccattg 161  Q
    ||||||||||| ||| ||||||||||||||||||||    
T  41188885 atgcaaacatactacatttggcttccttaaccattg 41188920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 8292856 - 8292718
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||  |||||||||| ||||||| |||| |||| |    
T  8292856 ttggagcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagttataaatttgcctttttaaaagtcaaaatgttgttgaaatc 8292757  T
Q  126 aatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||| |||||||  |||||||| |||||||||||||||||    
T  8292756 aatccaaacatgctacttttgacttccttaaccattgcc 8292718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 22521694 - 22521539
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||| ||| |||||||||||||||||| |||||| ||||||| |||| |||||||||    
T  22521694 gggcattggataagaggataaaactagaaatatagcattggaaaatgatgagaagtgataaatttaacttcttaaaagtcaaaatgttgttgaaaccaat 22521595  T
Q  129 gcaaacat-atacttttggcttccttaaccattgcc----ttagcaagaccctttt 179  Q
    ||||||||  |||||||| ||| ||||||||||| |    ||||||||||||||||    
T  22521594 gcaaacatgctacttttgactttcttaaccattgtcttggttagcaagaccctttt 22521539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 36279231 - 36279095
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    |||||||||||||||||  ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||     
T  36279231 cttggggcattggataataggataaaaatataaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa---tgttgaaat 36279135  T
Q  125 caatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
     |||||||||||  |||||||| ||| |||||||||||||    
T  36279134 taatgcaaacatgctacttttgcctttcttaaccattgcc 36279095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 7322958 - 7323088
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    |||||||||| |||||||||||||| ||||   ||| |||||||||||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||    
T  7322958 attggataagaggataaaaatagaaatataaccttgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaa 7323057  T
Q  133 acat-atacttttggcttccttaaccattgc 162  Q
    ||||  |||||||| |||| |||||||||||    
T  7323058 acatgctacttttgacttctttaaccattgc 7323088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 48454817 - 48454907
Alignment:
Q  23 cccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaat 113  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  48454817 cccttggggcattggataaggggataaaaatagaaatataacattgggaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 48454907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 40066915 - 40067045
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||||  |||||    
T  40066915 ttggtgcattggataaggggataaaaatagaaatataatattgaaaaatggtgaaaaatgataaatttaactttttaaaaat-aaaatgttgttaaaacc 40067013  T
Q  126 aatgcaaacata-tacttttggcttccttaacc 157  Q
    ||| |||| ||| |||||||| |||||||||||    
T  40067014 aatacaaa-atactacttttgccttccttaacc 40067045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 5347967 - 5348097
Alignment:
Q  23 cccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaa 122  Q
    ||||| |||||||| ||||||| ||| |||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||||||   ||| |||    
T  5347967 cccttagggcattgaataagggaatataaatagaaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaa---tgttgaa 5348063  T
Q  123 accaatgcaaacat-atacttttggcttccttaa 155  Q
    ||||||||||||||  ||||||||||||||||||    
T  5348064 accaatgcaaacatgctacttttggcttccttaa 5348097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 8258636 - 8258761
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||||||| |||||||||||||||||||||| |||     || |||||||||||||||||||||||||||||||||| | ||| ||| |||| |    
T  8258636 tgcccttggggcatcggataaggggataaaaatagaaatat-----tgaaaaatggtgaaaagtgataaatttaactttttaatagtcataattttgttg 8258730  T
Q  121 aaaccaatgcaaacata-tacttttggcttc 150  Q
    ||||||||||||||||| |||||||| ||||    
T  8258731 aaaccaatgcaaacatactacttttgccttc 8258761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 30538476 - 30538585
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||   ||| ||||    
T  30538476 ccttgggacattagataaggggataaaaatagaaatatagtattagaaaatagtgaaaaatgataaatttaactttttaaaaatcaaaa---tgttgaaa 30538572  T
Q  124 ccaatgcaaacat 136  Q
     ||||||||||||    
T  30538573 tcaatgcaaacat 30538585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 46478560 - 46478689
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||||||||||||||||||||||| ||||  |||| ||||| ||||||| |||||||||||||||||||||| | |||||||||| ||||| ||||||    
T  46478560 cattggataaggggataaaaatagaaatatatcattgaaaaatagtgaaaa-tgataaatttaactttttaaaagttaaaatattgttgaaactaatgca 46478658  T
Q  132 aacat-atacttttggcttccttaaccattg 161  Q
    || ||  ||||||||||||| ||||||||||    
T  46478659 aatatgttacttttggcttcgttaaccattg 46478689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 43958087 - 43958191
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| ||||||| |||||||||||| ||||||||| ||||||||||   ||||||||||||    
T  43958087 cattggataaggcgataaaaatagaaatatagtattagaaaattgtgaaaaatgataaatttaattttttaaaagtcaaaatattactgaaaccaatgca 43958186  T
Q  132 aacat 136  Q
    |||||    
T  43958187 aacat 43958191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 1910359 - 1910217
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||||||| |||||||| |||||||||||| ||||  ||| |||||||||||||| |||||||||||||||||||||| | ||||| |||| |    
T  1910359 tgcccttagggcatttgataaggg-ataaaaatagaaatataacattagaaaatggtgaaaaatgataaatttaactttttaaaagttaaaatgttgttg 1910261  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||| |||| ||||||  |||||||| |||| ||||||||||||    
T  1910260 aaacaaatgtaaacatgctacttttgacttctttaaccattgcc 1910217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 3681797 - 3681699
Alignment:
Q  34 ttggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    ||||||||||||||||||||| || || |  ||||||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||||||    
T  3681797 ttggataaggggataaaaataaaaatacaacattggaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaa 3681699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 29687547 - 29687447
Alignment:
Q  66 ttggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaaccattgcct 164  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||| |||| |||||||||||||||||  ||||||||||||||||||  |||||||    
T  29687547 ttggaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaagtattgcct 29687448  T
Q  165 t 165  Q
    |    
T  29687447 t 29687447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 31626051 - 31626147
Alignment:
Q  38 ataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaac 134  Q
    |||||| |||||||||| || |||| ||||  |||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  31626051 ataaggagataaaaataaaaatataatattaaaaaatgatgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaac 31626147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 1907593 - 1907717
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    ||||||||||  ||||||||| |||| ||| |||||| |||||||| |||| | || ||||||| ||||||| |||||||||||||| |||  |||||||    
T  1907593 cattggataaaaggataaaaagagaaatattgtattgaaaaatggtaaaaaataatgaatttaattttttaataatcaaaatattgttgaatgcaatgca 1907692  T
Q  132 aacatatacttttggcttccttaac 156  Q
    ||||||||| ||||| |||||||||    
T  1907693 aacatatacatttggtttccttaac 1907717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 46042838 - 46042748
Alignment:
Q  46 ataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata 137  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| ||| || |||| |||| ||||||||||||||||||    
T  46042838 ataaaaatagaaatatagtattg-aaaatggtgaaaagttataaatttaacttttttaaagtctaaatgttgttgaaaccaatgcaaacata 46042748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 40194920 - 40194827
Alignment:
Q  43 gggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat 136  Q
    |||||||||||| || |||||||||  ||| || ||||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||||||    
T  40194920 gggataaaaatataaatatagtattataaattgatgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaacat 40194827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 61 - 160
Target Start/End: Original strand, 30388693 - 30388793
Alignment:
Q  61 tagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaaccat 159  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| |||||||||| | |||| ||||  ||||||| |||||||| |||| ||||||||    
T  30388693 tagtattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaatcaatataaacatactacttttgacttctttaaccat 30388792  T
Q  160 t 160  Q
    |    
T  30388793 t 30388793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 22707164 - 22707050
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||| ||||||||||| |||| || |||||||||||| ||||| ||||||||||  |||||| |||||||||| ||||||||||| | || || |||| |    
T  22707164 tgcctttggggcattgaataaagg-ataaaaatagaaatatagcattggaaaataatgaaaaatgataaattttactttttaaaagttaacatgttgttg 22707066  T
Q  121 aaaccaatgcaaacat 136  Q
    ||||||||||||||||    
T  22707065 aaaccaatgcaaacat 22707050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 10575802 - 10575895
Alignment:
Q  71 aaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| |||  ||||| ||| ||| ||||||||  ||| ||||||||||||    
T  10575802 aaatggtgaaaagtgaaaaatttaactttttaaaactccaaatattgttgaattcaatgaaaatatactacttttgatttctttaaccattgcc 10575895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 16082473 - 16082561
Alignment:
Q  69 gaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaac 156  Q
    |||||||||||||| |||| |||||||| |||||||| | ||  |||||| ||| |||||||||||||| ||||||||| |||||||||    
T  16082473 gaaaatggtgaaaattgatgaatttaacgttttaaaagttaagttattgttgaatccaatgcaaacatactacttttggattccttaac 16082561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 35003716 - 35003630
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa 112  Q
    ||||||||||| | | || ||| |||||||||| |||  ||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  35003716 cttggggcattagtttagaggacaaaaatagaaatattatattg-aaaatggtgaaaagtgattaatttaactttttaaaaattaaaa 35003630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 41141098 - 41141043
Alignment:
Q  63 gtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||||| |||||    
T  41141098 gtattggaaaatggtgaaaagttgttaatttaactttttaaaaatcaaaaaattgt 41141043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 31360309 - 31360363
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaacttt 99  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||||||||||||    
T  31360309 gataaaaatagaaatattgtattgggaaatggtaaaaagtgataaatttaacttt 31360363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 32204270 - 32204186
Alignment:
Q  49 aaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaa 133  Q
    ||||||||| ||| | |||| |||||| ||||||||||| ||||||||||||||||| | |||||||| | |||  |||||||||    
T  32204270 aaaatagaaatattgcattgaaaaatgatgaaaagtgatgaatttaactttttaaaagttaaaatatttttgaatacaatgcaaa 32204186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 44296945 - 44297040
Alignment:
Q  72 aatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaaccattgcctta 166  Q
    |||||||||||||||| ||||||| ||||||||| | ||||||| || ||| |||||| |||| |  ||||||||| ||||||||| | |||||||    
T  44296945 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaacaagtgcctta 44297040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 29959100 - 29959042
Alignment:
Q  104 aaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    |||||||||| |||| ||||||||||||||||| |||||||||| |||||||| |||||    
T  29959100 aaatcaaaatgttgttgaaaccaatgcaaacataatacttttggtttccttaatcattg 29959042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 4686079 - 4686120
Alignment:
Q  64 tattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  4686079 tattgaaaaatggtgaaaagtgattaatttaactttttaaaa 4686120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 6548602 - 6548533
Alignment:
Q  65 attggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaac 134  Q
    ||||| ||| |||||||| |||| ||||||||||||||||| | |||||||||| | | |||||||||||    
T  6548602 attgggaaacggtgaaaaatgatgaatttaactttttaaaagttaaaatattgttggatccaatgcaaac 6548533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 40774259 - 40774331
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattg 117  Q
    |||| |||||||| ||| | |||| |||||| |||||| |||| ||||||||||||||||| | |||||||||    
T  40774259 gatacaaatagaaatattgcattgaaaaatgatgaaaattgatgaatttaactttttaaaagttaaaatattg 40774331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 35239785 - 35239864
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    |||||||||| |||||| |||||||| || || ||| || ||| |||||| | ||| ||||| |||||||||||||||||    
T  35239785 ttggggcatttgataagaggataaaagtaaaaatatggtgttgaaaaatgataaaacgtgatgaatttaactttttaaaa 35239864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 16931963 - 16931910
Alignment:
Q  64 tattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||| || ||||||||  ||||||||||||||||| ||||||||||||    
T  16931963 tattggaaaatagt-aaaagtgaataatttaactttttaaaagtcaaaatattgt 16931910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 16937346 - 16937293
Alignment:
Q  64 tattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||| || ||||||||  ||||||||||||||||| ||||||||||||    
T  16937346 tattggaaaatagt-aaaagtgaataatttaactttttaaaagtcaaaatattgt 16937293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 46423463 - 46423377
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||| |||||| | ||||||||| || ||| |||||  |||||||| ||||||||||||||||| || |||||| |  |||||||||    
T  46423463 catttgataagagaataaaaataaaaatattgtatttaaaaatggtaaaaagtgataaatttaatttcttaaaagtacaaatattgt 46423377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 16957711 - 16957639
Alignment:
Q  91 tttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
    ||||||||||||||| |||||||||||| |||   |||| ||| ||| ||||||||| ||||||||||||||||    
T  16957711 tttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatattacttttgg-ttccttaaccattgcc 16957639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 18800166 - 18800238
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||||| ||| |||||  |||||  | || |||||||||||||||||||||||||| | ||||||||    
T  18800166 gataaaaatagaaatattgtatta-aaaataataaagagtgataaatttaactttttaaaaattacaatattgt 18800238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 3720131 - 3720191
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    ||||||||||| | ||| | ||||  |||||||| ||| ||||||||||||||||||||||    
T  3720131 gataaaaatagtaatattgcattgacaaatggtgtaaaatgataaatttaactttttaaaa 3720191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 42291371 - 42291279
Alignment:
Q  48 aaaaatagaattatagtattgg-aaaatggtgaaaagtgataaa-tttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacatat 138  Q
    |||||||||| ||| ||||||| ||||| ||||||| | ||||| ||||  ||||||||| | |||||||||| ||| |||||||||| ||||    
T  42291371 aaaaatagaaatattgtattggaaaaatagtgaaaaataataaattttatttttttaaaagttaaaatattgttgaatccaatgcaaatatat 42291279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 7e-54; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 35653248 - 35653391
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |    
T  35653248 tgcccttggtgcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttgaaaatcaaaatgttgttg 35653347  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  35653348 aaaccaatgcaaacatggtacttttggcttccttaaccattgcc 35653391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 25017284 - 25017426
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || |    
T  25017284 tgcccttgaggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttg 25017383  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgc 162  Q
    |||||||| |||||||  |||||||| ||||||||||||||||    
T  25017384 aaaccaatacaaacatgctacttttgacttccttaaccattgc 25017426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 4421957 - 4422100
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||| |    
T  4421957 tgcccttagggcattggataagaggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttacaaatcaaaatgttgttg 4422056  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||  ||||||||||||  |||||||| |||||||||||||||||    
T  4422057 aagtcaatgcaaacatgttacttttgacttccttaaccattgcc 4422100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 39568019 - 39567876
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||| |||||||||||| || ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||| ||||| |    
T  39568019 tgcccttggggcattggataatgggataaaaatataaatatagcattggaaaatgatgaaaaatgataaatttaactttttaaaaatcaaaacattgttg 39567920  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||||||||||  |||||||| ||||||||| |||||||    
T  39567919 aaaccaatgcaaacatgctacttttgacttccttaatcattgcc 39567876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 16315527 - 16315668
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||||||||| | ||||||| |||| |    
T  16315527 tgccctttgggcatcggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaa--taactttttaatagtcaaaatgttgttg 16315624  T
Q  121 aaaccaatgcaaaca-tatacttttggcttccttaaccattgcc 163  Q
    |||||||||||||||   ||||||||||||||||||||||||||    
T  16315625 aaaccaatgcaaacacgctacttttggcttccttaaccattgcc 16315668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 12914261 - 12914151
Alignment:
Q  51 aatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggctt 149  Q
    ||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12914261 aatagaaatatagcattgaaaaatggtgaaaagtgataaatttaattttttaaaaatcaaaatattgttgaaaccaatgcaaacatactacttttggctt 12914162  T
Q  150 ccttaaccatt 160  Q
    |||||||||||    
T  12914161 ccttaaccatt 12914151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 34546891 - 34546751
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||| | ||||||||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||| ||||||||| | ||||| |||| ||||    
T  34546891 ccttggagtattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaattttttaaaagttaaaatgttgttgaaa 34546792  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    | |||||||| || |||||||||||||||||||||||||||    
T  34546791 ctaatgcaaaaatgatacttttggcttccttaaccattgcc 34546751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 43414057 - 43414172
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||| ||  |||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||| |    
T  43414057 tgcccttgggacaagggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgatcaatttaactttttaaaaatcaaaatgttgttg 43414156  T
Q  121 aaaccaatgcaaacat 136  Q
    ||||||||||||||||    
T  43414157 aaaccaatgcaaacat 43414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 3639079 - 3639207
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    ||||| |||||||||||||||||||| ||||  |||||||||||||||| |||||||||||||| ||||||||| || ||||||||| ||||||||||||    
T  3639079 cattgaataaggggataaaaatagaaatataacattggaaaatggtgaagagtgataaatttaattttttaaaagtc-aaatattgttgaaaccaatgca 3639177  T
Q  132 aacata-tacttttggcttccttaaccatt 160  Q
    |||||| |||||||| ||||||||||||||    
T  3639178 aacatattacttttgacttccttaaccatt 3639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 1759929 - 1759821
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||| ||||||| ||||  ||||    
T  1759929 cttggggcattggataagaggataaaaatagaaatatagtattgaaaaatggagaaaagtgataaatttaactttttaaaagtcaaaatgttgttaaaac 1759830  T
Q  125 caatgcaaa 133  Q
    |||||||||    
T  1759829 caatgcaaa 1759821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 338757 - 338872
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||| |||||||||||| || |||  ||||| |||||| | |||||||||||||||||||||||||||||||||||||||| |    
T  338757 tgcccttggggcattggataaagggataaaaataaaaatatgatattgaaaaatgataaaaagtgataaatttaactttttaaaaatcaaaatattgttg 338856  T
Q  121 aaaccaatgcaaacat 136  Q
    |||| |||||||||||    
T  338857 aaacaaatgcaaacat 338872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 27823365 - 27823235
Alignment:
Q  31 gcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgc 130  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||| |||| |||| |    
T  27823365 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaa---tgttgaaatcaatac 27823269  T
Q  131 aaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||  || ||||| ||||||||| |||||||    
T  27823268 aaacatgctaattttgacttccttaatcattgcc 27823235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 5151596 - 5151468
Alignment:
Q  30 ggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatg 129  Q
    |||||| ||||||||||||||||||||| ||||  ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||| ||||| ||||    
T  5151596 ggcatttgataaggggataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaactaatg 5151497  T
Q  130 caaacat-atacttttggcttccttaacc 157  Q
    |||||||  |||||||| |||||||||||    
T  5151496 caaacatgctacttttgccttccttaacc 5151468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 8410258 - 8410113
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||| |||||| ||| |||||||||||||||||| || ||||||||| ||||||||| |||| |||||||||||||||||||||| ||||||| || |      
T  8410258 tgcctttggggtattagataaggggataaaaataaaaatatagtattagaaaatggtaaaaaatgataaatttaactttttaaaagtcaaaatgttatta 8410159  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcctt 165  Q
    |||||||| |||||||  || ||||||||||||||| |||||||||    
T  8410158 aaaccaatacaaacatgctagttttggcttccttaatcattgcctt 8410113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 28143116 - 28143253
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||| ||||| |||||| ||||||||||||| ||||  ||||| |||||||||||| | |||||||||||||||||||||||||||| |||| |    
T  28143116 tgcccttgggacattgaataaggagataaaaatagaaatataacattgggaaatggtgaaaaataataaatttaactttttaaaaatcaaaatgttgttg 28143215  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaacc 157  Q
    |||| ||| |||||||  ||||||||||||| ||||||    
T  28143216 aaactaatacaaacatgctacttttggcttctttaacc 28143253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 35945358 - 35945222
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    ||||||| |||||||||||| |||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||  | ||||| |||| |||||    
T  35945358 cttggggtattggataagggaataaaaatagaaatataacattggaaaatagtgaaaagtgataaatttaactttttaaatgttaaaatgttgttgaaac 35945259  T
Q  125 caatgcaaacat-atacttttggcttccttaaccatt 160  Q
     |||||||| || ||| ||||||||| ||||||||||    
T  35945258 taatgcaaatatgatatttttggctttcttaaccatt 35945222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 37243962 - 37243852
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||| |||||||||||| || ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |    
T  37243962 tgcccttgaggcattggataaagg-ataaaaataaaaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttg 37243864  T
Q  121 aaaccaatgcaa 132  Q
    ||| ||||||||    
T  37243863 aaatcaatgcaa 37243852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 13951258 - 13951372
Alignment:
Q  50 aaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggct 148  Q
    |||||||| ||||| |||| |||||||||||||||||||||||||  ||||||||| ||||||| |||| ||||||||||||| |||  |||||||||||    
T  13951258 aaatagaaatatagcattgaaaaatggtgaaaagtgataaatttatttttttaaaagtcaaaatgttgttgaaaccaatgcaagcatgctacttttggct 13951357  T
Q  149 tccttaaccattgcc 163  Q
    |||||||||||||||    
T  13951358 tccttaaccattgcc 13951372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 12068178 - 12068307
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | || |||||| ||    
T  12068178 cattggatgaggatataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttattgacaccaataca 12068277  T
Q  132 aacatatacttttggcttccttaaccattg 161  Q
    |||||    ||||| ||| |||||||||||    
T  12068278 aacatgctattttgactttcttaaccattg 12068307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 25568304 - 25568428
Alignment:
Q  40 aaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-at 138  Q
    ||||||||||||||| || ||||| |||| |||||| |||||||||||| |||||||||||||||||||||||| || | |||||||||||||||||  |    
T  25568304 aaggggataaaaatataaatatagcattgaaaaatgatgaaaagtgatacatttaactttttaaaaatcaaaatgttattgaaaccaatgcaaacatgtt 25568403  T
Q  139 acttttggcttccttaaccattgcc 163  Q
    | |||| | ||||||||||||||||    
T  25568404 aattttagtttccttaaccattgcc 25568428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 4962510 - 4962652
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||| ||||||||||||  |||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||| |    
T  4962510 tgcccttgggacattggataagga-ataaaaatagaaatataacattggaaaatgatgaaaagtgataaatttaacttttttaaagtcaaaatgttgttg 4962608  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||| ||| |||||||  |||||||| ||| | |||||||||||    
T  4962609 aaactaatacaaacatgctacttttgtctttcctaaccattgcc 4962652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 15915944 - 15915871
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactt 98  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  15915944 cttggggcattggataagggaataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactt 15915871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 1479133 - 1479236
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    |||| ||||||| |||||||||||||||||||| ||||| |||| |||||  ||||||||||||||||||||||||||||| ||||||| || | |||||    
T  1479133 cttgaggcattgaataaggggataaaaatagaaatatagcattgaaaaataatgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaac 1479232  T
Q  125 caat 128  Q
    ||||    
T  1479233 caat 1479236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 39167687 - 39167569
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttt 143  Q
    |||||||||||||  || |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||  ||  ||||| ||| ||| ||||||    
T  39167687 gataaaaatagaaacattgtattggaaaatggtgaaaagt-aaaaatttaactttttaaaaatcaaaacattgttaaattcaatgtaaatatattacttt 39167589  T
Q  144 tggcttccttaaccattgcc 163  Q
    ||| || |||||||||||||    
T  39167588 tggttttcttaaccattgcc 39167569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 10017626 - 10017728
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||| |||||| |||||||||||||| ||||||| ||| |||||||||||| |||||||  ||||||||||||| | ||||| ||||  |||||||||||    
T  10017626 catttgataagaggataaaaatagaaatatagtactgg-aaatggtgaaaattgataaa--taactttttaaaagttaaaatgttgttaaaaccaatgca 10017722  T
Q  132 aacata 137  Q
    ||||||    
T  10017723 aacata 10017728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 10406903 - 10406792
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| || ||||||||||  | |||  ||||||| ||| |||||| ||||||| |||||||||||||||||| ||||| ||| |||||||||||| |    
T  10406903 tgcccttaggacattggataaaagaataggaatagaaatattgtattgaaaaatggagaaaagtgataaatttaa-ttttttaaattcaaaatattgttg 10406805  T
Q  121 aaaccaatgcaaa 133  Q
    || ||||||||||    
T  10406804 aatccaatgcaaa 10406792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 39693088 - 39692984
Alignment:
Q  59 tatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaacc 157  Q
    ||||| |||| ||| |||| |||| ||||||||||| |||||||||| | |||||||||| |||| |||| |||||||  |||||||| |||||||||||    
T  39693088 tatagcattgaaaagtggtaaaaaatgataaatttatctttttaaaagttaaaatattgttgaaatcaatacaaacatgttacttttgacttccttaacc 39692989  T
Q  158 attgc 162  Q
    |||||    
T  39692988 attgc 39692984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 678556 - 678469
Alignment:
Q  31 gcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||| |||| ||| |||||||||||| | |||||||||||||||||||||| || |||||||| |||||||| | |||| |||||    
T  678556 gcattggttaagaggacaaaaatagaattgttgtattggaaaatggtgaaaagtaatgaatttaaccttttaaaagttaaaaaattgt 678469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 40099444 - 40099362
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaa-tggtgaaaagtgataaatttaactttttaaaaat 107  Q
    ||||| |||||||||||||||||  |||||| || ||||| |||| |||| ||||||||||||||||||||||| ||||||||||    
T  40099444 ccttgtggcattggataagggga--aaaataaaaatatagcattgaaaaaatggtgaaaagtgataaatttaaccttttaaaaat 40099362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 39069311 - 39069366
Alignment:
Q  63 gtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||||| |||||||||||| |||||||| |||||||| ||||||||||||    
T  39069311 gtattggaaaattgtgaaaagtgatgaatttaacattttaaaagtcaaaatattgt 39069366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 6823773 - 6823858
Alignment:
Q  49 aaaatagaattatagtattggaaaatggtgaaaagtgataaattt-aactttttaaaaatcaaaatattgtcgaaaccaatgcaaa 133  Q
    ||||||||| ||| |||| |||||| |||| ||||| |||||||| |||||||||||| | |||||||||| ||| ||||||||||    
T  6823773 aaaatagaaatattgtatcggaaaacggtggaaagtaataaattttaactttttaaaagttaaaatattgttgaatccaatgcaaa 6823858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 4838322 - 4838259
Alignment:
Q  96 ctttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaacca 158  Q
    |||||||||| |||||||||||| ||||| |||||||||||  || ||||||||||||||||||    
T  4838322 ctttttaaaagtcaaaatattgttgaaactaatgcaaacatgttatttttggcttccttaacca 4838259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 5058834 - 5058775
Alignment:
Q  48 aaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaat 107  Q
    ||||||| ||||||  | ||| ||||| ||||||||||||||||||||||||||||||||    
T  5058834 aaaaataaaattattattttgtaaaattgtgaaaagtgataaatttaactttttaaaaat 5058775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 27535202 - 27535096
Alignment:
Q  30 ggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgat-aaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    ||||||| ||||  ||||||||||| || ||| |||||| |||||||||||||||||| || ||||| ||||||||| | ||||   ||| ||| |||||    
T  27535202 ggcattgaataaaaggataaaaatataaatattgtattgaaaaatggtgaaaagtgatgaattttaagtttttaaaagttaaaa---tgttgaatccaat 27535106  T
Q  129 gcaaacatat 138  Q
    ||||||||||    
T  27535105 gcaaacatat 27535096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 39335540 - 39335473
Alignment:
Q  70 aaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata 137  Q
    ||||| || ||||||||| ||||||||||||||||| ||||||| |||| ||| ||||| ||||||||    
T  39335540 aaaatagtaaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatacaaacata 39335473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 38610284 - 38610382
Alignment:
Q  20 atgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||| ||| ||| ||||  |||||||||||||  || | |||| |||||| | ||||||||  ||||||||||||||||| |||||| |||||    
T  38610284 atgcccttggagcaatggttaagatgataaaaatagaaacattgcattgaaaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgt 38610382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 3015067 - 3015140
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||||| ||| || || |||||| ||| ||| |||| ||||||||||||||||| | ||||||||||    
T  3015067 gataaaaatagaaatattgtgttagaaaatagtgtaaaatgattaatttaactttttaaaagttaaaatattgt 3015140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 10163668 - 10163715
Alignment:
Q  70 aaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattg 117  Q
    |||| ||||||||||||  ||||||||||||||||| |||||||||||    
T  10163668 aaaagggtgaaaagtgaagaatttaactttttaaaagtcaaaatattg 10163715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 17168783 - 17168696
Alignment:
Q  30 ggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattg 117  Q
    |||||||| ||||  |||| |||||||| ||| | |||| |||| |||||||| |||| ||||| ||||||||||| | |||||||||    
T  17168783 ggcattggttaagaagatacaaatagaaatattgcattgaaaaacggtgaaaaatgatgaatttgactttttaaaatttaaaatattg 17168696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 24288553 - 24288519
Alignment:
Q  71 aaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    |||||||||||||||||| ||||||||||||||||    
T  24288553 aaatggtgaaaagtgatagatttaactttttaaaa 24288519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 24373668 - 24373702
Alignment:
Q  71 aaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    |||||||||||||||||| ||||||||||||||||    
T  24373668 aaatggtgaaaagtgatagatttaactttttaaaa 24373702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 12349585 - 12349634
Alignment:
Q  69 gaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||||||||||||| |||| ||||||||||| | |||| |||||    
T  12349585 gaaaatggtgaaaagtgatagatttgactttttaaaagttaaaaaattgt 12349634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 16899635 - 16899684
Alignment:
Q  91 tttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacatatac 140  Q
    ||||||||||||||| ||||||| |||| ||| ||||| |||||||||||    
T  16899635 tttaactttttaaaagtcaaaatgttgttgaatccaatacaaacatatac 16899684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 156
Target Start/End: Complemental strand, 19894907 - 19894798
Alignment:
Q  48 aaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaa-catatacttttgg 146  Q
    |||||||||| ||| | |||  |||||||| |||  |||| ||||||||||||||||| | ||||||||||  || ||||| |||| | ||||||||||     
T  19894907 aaaaatagaaatattgcattaaaaaatggttaaatatgatgaatttaactttttaaaagttaaaatattgttaaatccaattcaaaccttatacttttga 19894808  T
Q  147 cttccttaac 156  Q
     |||||||||    
T  19894807 tttccttaac 19894798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 28599690 - 28599731
Alignment:
Q  64 tattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    ||||||||||| ||||||| |||||||||| |||||||||||    
T  28599690 tattggaaaatagtgaaaaatgataaatttgactttttaaaa 28599731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 15915083 - 15915014
Alignment:
Q  90 atttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaaccatt 160  Q
    |||||||||||||||| | |||||||| | |||| |||  |||||||| ||||||||| |||||||||||||    
T  15915083 atttaactttttaaaagttaaaatatttttgaaatcaa--caaacatactacttttggtttccttaaccatt 15915014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 1e-52; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 34874683 - 34874527
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| |    
T  34874683 tgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttg 34874584  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgccttagcaagaccctt 177  Q
    ||||||||||||||||  ||||||||||||||||||||| ||  ||||||||||||||    
T  34874583 aaaccaatgcaaacatgctacttttggcttccttaaccaatg-gttagcaagaccctt 34874527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 49508724 - 49508864
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  49508724 tgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtg-aaagtgataaatttaactttttaaaagtcaaaatattgtcg 49508822  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||||||||||||||||  ||||||||||||| ||||||||||    
T  49508823 aaaccaatgcaaacatgctacttttggcttctttaaccattg 49508864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 22346227 - 22346368
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| |    
T  22346227 tgcccttggggctttggataagggaataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatattgttg 22346326  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  22346327 aaaccaatgcaaacatgctacttttggcttccttaaccattg 22346368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 43433887 - 43433751
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||    
T  43433887 cttggggcattggataaggggataaaaatagaaatatagtattaaaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaac 43433788  T
Q  125 caatgcaaacata-tacttttggcttccttaaccatt 160  Q
    |||| |||||||| |||||||||||||||||||||||    
T  43433787 caatacaaacatactacttttggcttccttaaccatt 43433751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 24 - 176
Target Start/End: Original strand, 41147471 - 41147624
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| |||||||| |||| |||| ||||||||||||||||| |||||||||||| ||||    
T  41147471 ccttggggcattggataaggggataaaaatagaaatatagcattgaaaaatggtaaaaaatgattaatttaactttttaaaagtcaaaatattgttgaaa 41147570  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgccttagcaagaccct 176  Q
    |||||||||||||  |||||||| |||||||||||||||||  |||||||||||    
T  41147571 ccaatgcaaacatgctacttttgacttccttaaccattgccccagcaagaccct 41147624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 27209714 - 27209854
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||| |||||||||||||||||||||| | ||||| |||| ||||    
T  27209714 ccttggggcattggataaagggataaaaatagaaatataacattggaaaatggtgaaaattgataaatttaactttttaaaagttaaaatgttgttgaaa 27209813  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  27209814 ccaatgcaaacatcctacttttggcttccttaaccattgcc 27209854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 49902037 - 49901906
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  | ||||  |||| ||||||    
T  49902037 ttggggtattggataagaggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaacgttaaaacgttgttgaaacc 49901938  T
Q  126 aatgcaaacat-atacttttggcttccttaac 156  Q
    ||||||||||| ||||||||||||||||||||    
T  49901937 aatgcaaacatgatacttttggcttccttaac 49901906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 24140888 - 24140739
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||| ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||| |||||||||| ||| ||||||| |||| |    
T  24140888 tgcctttggggcattg-ataaggggataaaaatagaaatatactattggaaaatggtgaaacgtgataaacttaacttttttaaagtcaaaatgttgttg 24140790  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgccttagcaa 170  Q
    ||||||||||||||||  || ||||||||||||||||||||||| ||||||    
T  24140789 aaaccaatgcaaacatgctatttttggcttccttaaccattgccctagcaa 24140739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 40845367 - 40845253
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||| | ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40845367 tgcccttgagacattgaataaggggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgttg 40845268  T
Q  121 aaaccaatgcaaaca 135  Q
    ||||||| |||||||    
T  40845267 aaaccaaagcaaaca 40845253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 50295428 - 50295535
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||| |    
T  50295428 ttggggcattggataagggggtaaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaatc 50295527  T
Q  126 aatgcaaa 133  Q
    ||||||||    
T  50295528 aatgcaaa 50295535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 4940740 - 4940873
Alignment:
Q  31 gcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgc 130  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||||||| |    
T  4940740 gcattggataaggggataaaaatagaaatatagcattggaaaatggttaaaagtgataaatttaactttttaaaagtcaaaatattgttaaaaccaatac 4940839  T
Q  131 aaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||  || |||||| ||||||||| ||||||    
T  4940840 aaacatgctatttttggtttccttaactattgcc 4940873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 11385800 - 11385908
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| |    
T  11385800 tgcccttgcagcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttg 11385899  T
Q  121 aaaccaatg 129  Q
    |||||||||    
T  11385900 aaaccaatg 11385908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 6170553 - 6170687
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    ||||||||| | ||||||||||||| ||||| |||||||||| | ||||| |||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  6170553 attggataaagagataaaaatagaaatatagcattggaaaatagagaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 6170652  T
Q  133 acat-atacttttggcttccttaaccattgcctta 166  Q
    ||||  |||||||| ||||||||||||||||||||    
T  6170653 acatgttacttttgacttccttaaccattgcctta 6170687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 932151 - 932287
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| | |||||||||| ||||||||| ||||||| |||| |||||    
T  932151 cttggggcattggataaggggataaaaatagaaatatagcattggaaaatgatgaaaaattataaatttaattttttaaaagtcaaaatgttgttgaaac 932250  T
Q  125 caatgcaaacat-atacttttggcttccttaaccatt 160  Q
     |||||||||||  |||||||  ||||||||||||||    
T  932251 taatgcaaacatgctacttttaccttccttaaccatt 932287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 11386094 - 11385954
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    ||||||| |||| |||||  |||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||| |||| ||||    
T  11386094 ccttgggacattagataattggataaaaatagaaatatagcattggaaaatggtaaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaa 11385995  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||||||||||||  ||||||||| || |||||||||||||    
T  11385994 ccaatgcaaacatgctacttttggttttcttaaccattgcc 11385954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 33 - 155
Target Start/End: Complemental strand, 33930070 - 33929947
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    |||||||||||||||||||||| || ||||| |||| ||||| ||||||| |||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  33930070 attggataaggggataaaaatataaatatagcattgaaaaatagtgaaaactgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 33929971  T
Q  133 acat-atacttttggcttccttaa 155  Q
    ||||  ||||||||||||||||||    
T  33929970 acatgctacttttggcttccttaa 33929947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 42607314 - 42607429
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||| |||||||||||||||||||||| || ||||| |||| ||||||||||||| |||||||||||||||||||||| ||||||| |||| |    
T  42607314 tgcccttagggtattggataaggggataaaaataaaaatatagcattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttg 42607413  T
Q  121 aaaccaatgcaaacat 136  Q
    ||||||||||||||||    
T  42607414 aaaccaatgcaaacat 42607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 47655372 - 47655495
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    ||||| |||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  47655372 cattgaataaggggataaaaatagaagtatagcattgaaaaatggtgaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 47655471  T
Q  132 aacat-atacttttggcttcctta 154  Q
    |||||  |||||||| ||||||||    
T  47655472 aacatgctacttttgccttcctta 47655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 2125701 - 2125838
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||||||| ||||||| |||  |||||    
T  2125701 cttggggcattggataaggggataaaaatagaaatatagcattgaaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatgttgatgaaac 2125800  T
Q  125 caatgcaaacat-atacttttggcttccttaaccattg 161  Q
     ||| ||| |||  |||||||| |||| ||||||||||    
T  2125801 aaatacaaccatgttacttttgacttctttaaccattg 2125838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 7190465 - 7190606
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||| |||| |||||||||||||| ||||| |||  |||||| ||||||||||||||||||||||||||||| | |||||  ||| |    
T  7190465 tgcccttggggcattggttaagaggataaaaatagaaatatagcattcaaaaatgatgaaaagtgataaatttaactttttaaaagttaaaatggtgttg 7190564  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    |||| |||||||||||  ||||||| ||||||||||||||||    
T  7190565 aaactaatgcaaacatgctacttttagcttccttaaccattg 7190606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 28850900 - 28851040
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||| |||||| | |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |    
T  28850900 tgcccttggggcattagataagagaataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa-attgttg 28850998  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||||||||||||| ||  |||||||| ||| |||||| ||||    
T  28850999 aaaccaatgcaaatatgctacttttgactttcttaacaattg 28851040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 52396549 - 52396444
Alignment:
Q  30 ggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatg 129  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||| |||||||||| | ||||| ||||    
T  52396549 ggcattggataaggggataaaaatagaaatatagtattgaaaaatgat-aaaagtgataaatttaactttttaaaagtcaaaatattattgaaacaaatg 52396451  T
Q  130 caaacat 136  Q
    |||||||    
T  52396450 caaacat 52396444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 47895412 - 47895308
Alignment:
Q  59 tatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaacc 157  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||  |||||||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  47895412 tatagtattgaaaaatggtgaaaggtgataaatttaactttttaaatgtcaaaatattgttgaaactaatgcaaacatgttacttttggcttccttaacc 47895313  T
Q  158 attgc 162  Q
    |||||    
T  47895312 attgc 47895308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 32213883 - 32213988
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    |||||| |||| ||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| |||||    
T  32213883 cttgggacattagataaggggataaaaatagaaatagaacattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaac 32213982  T
Q  125 caatgc 130  Q
    ||||||    
T  32213983 caatgc 32213988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 29966936 - 29966800
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaa-ctttttaaaaatcaaaatattgtcgaa 122  Q
    |||||| |||||||||||||||||||||||| || ||||| |||| |||||||  |||| ||||||||||||  ||||| ||| |||||||||||| |||    
T  29966936 ccttggagcattggataaggggataaaaatataaatatagcattgaaaaatggcaaaaaatgataaatttaattttttttaaagtcaaaatattgttgaa 29966837  T
Q  123 accaatgcaaacat-atacttttggcttccttaacca 158  Q
    ||||||||||||||  |||||||| ||||||||||||    
T  29966836 accaatgcaaacatgctacttttgacttccttaacca 29966800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 28277484 - 28277610
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    |||||||||| |||||||||||||| ||||  |||| |||||| | ||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||    
T  28277484 attggataagaggataaaaatagaaatataacattgaaaaatgataaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaa 28277583  T
Q  133 acat-atacttttggcttccttaacca 158  Q
    ||||  ||||||||  |||||||||||    
T  28277584 acatgttacttttgatttccttaacca 28277610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 45721865 - 45721728
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||| ||||||||||||| |||||||||| || ||||  ||||||||||||| |||| |||||||||||||||||||||||||||||   |||  |||    
T  45721865 ccttggagcattggataaggtgataaaaataaaaatataacattggaaaatggtaaaaactgataaatttaactttttaaaaatcaaaa---tgttaaaa 45721769  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
     ||||||||||||  ||||||||  ||||||||||||||||    
T  45721768 tcaatgcaaacatgctacttttgatttccttaaccattgcc 45721728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 45 - 176
Target Start/End: Complemental strand, 50154565 - 50154432
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttt 143  Q
    |||||||||| || ||||| |||| |||||| | |||| ||||||||||||| |||||||| | ||||| |||| |||||||||||||||||  ||||||    
T  50154565 gataaaaatataaatatagcattgaaaaatgataaaaaatgataaatttaaccttttaaaagttaaaatgttgttgaaaccaatgcaaacatgttacttt 50154466  T
Q  144 tggcttccttaaccatt-gccttagcaagaccct 176  Q
    |||||||||||||||||  |||||||||||||||    
T  50154465 tggcttccttaaccattacccttagcaagaccct 50154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 33 - 155
Target Start/End: Original strand, 26469584 - 26469707
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    ||||||||| |||||||||||| || ||||| |||| |||||  |||||| |||||||||||||||||||||| |||||||||| | |||||||||| ||    
T  26469584 attggataaagggataaaaataaaaatatagcattgaaaaataatgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaaccaatgaaa 26469683  T
Q  133 acata-tacttttggcttccttaa 155  Q
    ||||| |||||||  |||||||||    
T  26469684 acatactacttttaacttccttaa 26469707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 31975603 - 31975460
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||| || ||||||||| | |||| |||||||| ||||  |||| |||||| | ||||||| ||||||||||||||||||||||||||||||||      
T  31975603 tgcccttgaggtattggataaagagatataaatagaaatataacattgaaaaatgataaaaagtggtaaatttaactttttaaaaatcaaaatattgtta 31975504  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||| |||||||||||  || |||| |||| |||||||||||||    
T  31975503 aaactaatgcaaacatgttatttttagctttcttaaccattgcc 31975460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 14331953 - 14331810
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||| |||   |||||||||||||  || ||||||| |||||||||||| |||  ||||||||||||||||| |||||| ||||| |    
T  14331953 tgcccttggggcattggttaaaatgataaaaatagaaacattgtattgggaaatggtgaaaaatgaagaatttaactttttaaaagtcaaaacattgttg 14331854  T
Q  121 aaaccaatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
    ||  ||||| ||| ||| || |||||| ||||||||||||||||    
T  14331853 aattcaatgtaaatatactatttttggtttccttaaccattgcc 14331810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 44359662 - 44359805
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||| |||||| ||||  |||||||||||||  || |||| || ||||||||||||||||  ||||||||||||||||| |||||| ||||| |    
T  44359662 tgcccttgggccattggttaagatgataaaaatagaaacattgtatcgggaaatggtgaaaagtgaagaatttaactttttaaaagtcaaaacattgttg 44359761  T
Q  121 aaaccaatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
    ||  ||||| ||| ||| || |||||| ||||||||||||||||    
T  44359762 aattcaatgtaaatatactatttttggtttccttaaccattgcc 44359805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 4656121 - 4656020
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    ||||||||||||  ||||||||| || ||||  |||||||||| || ||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||    
T  4656121 cattggataaggaaataaaaataaaaatataacattggaaaatagtaaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaactaatgca 4656022  T
Q  132 aa 133  Q
    ||    
T  4656021 aa 4656020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 43168257 - 43168117
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||||||||| ||||  |||||||||||||  || ||||||| ||||||||||||||||  | ||||||||||||||| |||||| ||||| |    
T  43168257 tgcccttagggcattggttaagatgataaaaatagaaacattgtattgggaaatggtgaaaagtgaagagtttaactttttaaaagtcaaaacattgttg 43168158  T
Q  121 aaaccaatgcaaacata-tacttttggcttccttaaccatt 160  Q
    ||  ||||| ||| ||| ||||||||  |||||||||||||    
T  43168157 aattcaatgtaaatatactacttttgatttccttaaccatt 43168117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 44286985 - 44286873
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    ||||||||||||  ||||  ||||||||||| || || |||||| || ||| ||||||| |||||||||||||||||||||||| |||||||| |  |||    
T  44286985 ccttggggcattatataaaaggataaaaataaaaatacagtattagagaatagtgaaaaatgataaatttaactttttaaaaattaaaatattattaaaa 44286886  T
Q  124 ccaatgcaaacat 136  Q
    |||||||||||||    
T  44286885 ccaatgcaaacat 44286873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 17403056 - 17402967
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||| |||||||||||||||  || ||| |||||  |||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  17403056 gggcattggttaaggggataaaaattaaaatattgtattaaaaaatggtaaaaagtgatgaatttaactttttaaaagtcaaaatattgt 17402967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 48938727 - 48938611
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttt 143  Q
    ||||||||||||| ||| ||||| |||||||||||||||||| |||||| ||||||||||| |||||| ||||| |||   |||| ||| ||| ||||||    
T  48938727 gataaaaatagaaatattgtattagaaaatggtgaaaagtgaaaaattt-actttttaaaagtcaaaacattgttgaatttaatgtaaatatactacttt 48938629  T
Q  144 tggcttccttaaccattg 161  Q
    ||| ||||||||||||||    
T  48938628 tggtttccttaaccattg 48938611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 16691410 - 16691313
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||||||||| ||||  |||||||||||||  || ||||||| ||||||| |||| |||  ||||||||||||||||| |||||| |||||    
T  16691410 tgcccttggggcattggttaagatgataaaaatagaaacattgtattgggaaatggtaaaaaatgaagaatttaactttttaaaagtcaaaacattgt 16691313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 5945533 - 5945447
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaa 110  Q
    |||||| ||||||||||| |  |||||||||||| |||   |||| |||||||||||||||||||||||| ||||||||||| ||||    
T  5945533 ccttggagcattggataacgaaataaaaatagaaatatgacattgaaaaatggtgaaaagtgataaattttactttttaaaagtcaa 5945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 8892785 - 8892858
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||||||  || |||||||||||||||||||||| |  ||||||||||||||||| |||||| |||||    
T  8892785 gataaaaatagaaacatcgtattggaaaatggtgaaaagtaaagaatttaactttttaaaagtcaaaacattgt 8892858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 30222697 - 30222624
Alignment:
Q  61 tagtattggaaaatggtgaaaagtgataaatttaactttttaaaaa-tcaaaatattgtcgaaaccaatgcaaa 133  Q
    ||||||| ||||||| || |||||||||||||||| |||||||||| | |||||||||| ||||||||||||||    
T  30222697 tagtattagaaaatgatggaaagtgataaatttaattttttaaaaagttaaaatattgttgaaaccaatgcaaa 30222624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 40920292 - 40920189
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtg--ataaatttaactttttaaaaatcaaaatattgtcgaaaccaatg 129  Q
    |||||| |||| |||||||||||||| ||| | ||||  || ||||||||||||  || ||||||||||||||||| | |||||||||| ||| ||||||    
T  40920292 cattggttaagaggataaaaatagaaatattgcattgagaagtggtgaaaagtgtgattaatttaactttttaaaagttaaaatattgttgaatccaatg 40920193  T
Q  130 caaa 133  Q
    ||||    
T  40920192 caaa 40920189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 41898878 - 41898946
Alignment:
Q  50 aaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||| ||| |||||| |||||||| ||||||||| ||||||||||||||||| | ||||||||||    
T  41898878 aaatagaaatattgtattgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattgt 41898946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 8244200 - 8244070
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    |||||||||||||||||||||||||| |||||| ||||  |||||||||||    | | |||||||||||||||||| |     || || || | |||||    
T  8244200 cttggggcattggataaggggataaatatagaaatataacattggaaaatg----ataatgataaatttaactttttca-----aacatgtttttgaaac 8244110  T
Q  125 caatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||| ||||||  || |||||||||||||||||||||||    
T  8244109 caatggaaacatgttatttttggcttccttaaccattgcc 8244070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 51424245 - 51424137
Alignment:
Q  49 aaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggc 147  Q
    ||||||||| ||| |||||| ||||| |  ||||||||| ||||||||||||||||  | |||| ||||| ||| |||||| ||||||| |||||||||     
T  51424245 aaaatagaaatattgtattgaaaaattgctaaaagtgatgaatttaactttttaaaggttaaaacattgttgaatccaatgtaaacatattacttttggt 51424146  T
Q  148 ttccttaac 156  Q
    ||| |||||    
T  51424145 ttctttaac 51424137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 27210823 - 27210757
Alignment:
Q  39 taaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    |||| ||||||||||| || ||| ||| || ||||||||||||| |||| |||||||||||||||||    
T  27210823 taagaggataaaaataaaactattgtaatgaaaaatggtgaaaaatgatcaatttaactttttaaaa 27210757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 41493024 - 41492912
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||  |||||||| |||| |||||||| ||||| ||| | ||||| || |||||||||||||| ||||| || |||||||| | |||||||||  |    
T  41493024 tgcccttaaggcattggttaagaggataaaa-tagaaatattgcattgggaagtggtgaaaagtgatgaattttacattttaaaagttaaaatattgatg 41492926  T
Q  121 aaaccaatgcaaac 134  Q
    || || ||||||||    
T  41492925 aatcccatgcaaac 41492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 2447236 - 2447183
Alignment:
Q  240 taaacttggtagctgtgtgacaatcttcacagacacgcaagtttttcacaatcc 293  Q
    ||||||| ||||| |  ||||||||||| |||||||||||||| ||||||||||    
T  2447236 taaacttagtagcagaatgacaatcttcgcagacacgcaagttcttcacaatcc 2447183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 46296240 - 46296272
Alignment:
Q  86 ataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||||||||||||| ||||||||||||    
T  46296240 ataaatttaactttttaaaagtcaaaatattgt 46296272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 3e-50; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 35808389 - 35808530
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||| ||||||| |||| |    
T  35808389 tgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaattgtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttg 35808488  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  35808489 aaaccaatgcaaacatgctacttttggcttccttaaccattg 35808530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 26040356 - 26040491
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||     
T  26040356 ccttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataagtttaactttttaaaagtcaaaatattgttgaag 26040455  T
Q  124 ccaatgcaaacat-atacttttggcttccttaacca 158  Q
    |||||||||| ||  |||||||||||||||||||||    
T  26040456 ccaatgcaaatatgctacttttggcttccttaacca 26040491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 55669855 - 55669712
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| ||||      
T  55669855 tgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgtta 55669756  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||| ||||||||||||  ||||||||||||||||||||||||||    
T  55669755 aaaacaatgcaaacatgctacttttggcttccttaaccattgcc 55669712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 30475541 - 30475399
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||| ||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||| |    
T  30475541 tgcccttagggtattggataaggagataaaaataaaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaatgtcaaaatattgttg 30475442  T
Q  121 aaaccaatgcaaacata-tacttttggcttccttaaccattgc 162  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  30475441 aaaccaatgcaaacatattacttttggcttccttaactattgc 30475399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 2362747 - 2362602
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaa--ctttttaaaaatcaaaatattgt 118  Q
    |||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||   ||||||||| ||||||| ||||    
T  2362747 tgcccttggggcatcggataaggggataaaaataaaaatatagtattggaaaatggtgaaaagtgataaatttaattttttttaaaagtcaaaatgttgt 2362648  T
Q  119 cgaaaccaatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
      ||||||||||||||||| |||||||| |||||||||||||||||    
T  2362647 taaaaccaatgcaaacatactacttttgacttccttaaccattgcc 2362602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 23765694 - 23765553
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||| |||| ||||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  23765694 tgcctttggtgcattagataaggggataaaaattgaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgttg 23765595  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||||||||||||||||  ||||||| ||||||||||| ||||    
T  23765594 aaaccaatgcaaacatgctacttttagcttccttaacaattg 23765553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 31755054 - 31754914
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||| |||||| |||||||||||||||||||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||| |    
T  31755054 tgccattggggtattggataaggggataaaaatataaatatagaattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttg 31754955  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccatt 160  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  31754954 aaaccaatgcaaacatgctacttttgacttccttaaccatt 31754914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 33951804 - 33951673
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    |||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |||    
T  33951804 attgaataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaa 33951705  T
Q  133 acat-atacttttggcttccttaaccattgcc 163  Q
    ||||  || |||||||||||||||||||||||    
T  33951704 acatgttaattttggcttccttaaccattgcc 33951673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 34316715 - 34316857
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgat-aaatttaactttttaaaaatcaaaatattgtc 119  Q
    ||||||||||||||||||||||| |||||||||| || ||||  |||| ||||| |||||||||||| |||||||||||||||||| ||||||||||||     
T  34316715 tgcccttggggcattggataaggagataaaaatataaatataacattgaaaaatagtgaaaagtgataaaatttaactttttaaaagtcaaaatattgtt 34316814  T
Q  120 gaaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  34316815 gaaaccaatgcaaacatgctacttttggcttccttaaccattg 34316857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 31168250 - 31168106
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||| ||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||| |    
T  31168250 tgcccttggagcattagacaaggggataaaaatagaattttagcattggaaaatggtgaaaagtgataaatttaatttttttaaagtcaaaatgttgttg 31168151  T
Q  121 aaaccaatgcaaaca-tatacttttggcttccttaaccattgcct 164  Q
    ||||||||| ||||| | ||||||||||||| |||||||||||||    
T  31168150 aaaccaatgtaaacattctacttttggcttctttaaccattgcct 31168106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 45688855 - 45688716
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    ||||||| |||||||||||||||||||||||||  |||| |||| |||||| ||||||||||||||||||||||||||||| ||||||| |||| |||||    
T  45688855 cttggggtattggataaggggataaaaatagaaacatagcattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaac 45688756  T
Q  125 caatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
     |||||||||||  ||||||||||||||||||| ||||||    
T  45688755 taatgcaaacatgctacttttggcttccttaactattgcc 45688716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 10100109 - 10100247
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    ||||||| ||| ||||||||||||||||||| || |||| |||| |||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||    
T  10100109 ccttgggacatcggataaggggataaaaatataaatataatattagaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttgaaa 10100208  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    |||||||||||||  |||||||||||| |||||||||||    
T  10100209 ccaatgcaaacatgttacttttggctttcttaaccattg 10100247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 41956206 - 41956348
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||||||| ||||||| |||||||||||||| ||||  ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||| |    
T  41956206 tgcccttggggcatcggataagaggataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttg 41956305  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgc 162  Q
    || |||||||||||||  |||||||| ||||||||||||||||    
T  41956306 aagccaatgcaaacatgctacttttgccttccttaaccattgc 41956348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 51267029 - 51266897
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||| ||    
T  51267029 cattggataaggagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaataca 51266930  T
Q  132 aacat-atacttttggcttccttaaccattgcc 163  Q
    |||||  |||||||| ||||||||| |||||||    
T  51266929 aacatgctacttttgacttccttaatcattgcc 51266897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 19328950 - 19329062
Alignment:
Q  50 aaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggct 148  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||| ||    
T  19328950 aaatagaaatatagcattggaaaatggtgaaatgtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgcct 19329049  T
Q  149 tccttaaccattg 161  Q
    |||||||||||||    
T  19329050 tccttaaccattg 19329062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 32131258 - 32131118
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||  |||||||||| | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||| || |||| |    
T  32131258 tgcccttggaacattggataaagagataaaaatagaaatatagtattggaaaatggtgataagtgataaatttaactttttaaaagtcaagatgttgttg 32131159  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccatt 160  Q
    ||||||||||||||||  |||||||  |||| |||||||||    
T  32131158 aaaccaatgcaaacatgttacttttaacttctttaaccatt 32131118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 34016730 - 34016626
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |||| |||||||    
T  34016730 cattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaaatcaatgca 34016631  T
Q  132 aacat 136  Q
    |||||    
T  34016630 aacat 34016626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 47188696 - 47188801
Alignment:
Q  59 tatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaacc 157  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||| |||||||||||||||||  ||||||||||||||||||||    
T  47188696 tatagtattggaaaatggtgaaaagtgataaatttaacttctaaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaacc 47188795  T
Q  158 attgcc 163  Q
    ||||||    
T  47188796 attgcc 47188801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 20811379 - 20811239
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||| |||||| |||  |||||||||||||||||||| ||||  |||||||| |||||||||||||||||||||||||||||||| ||||||| ||||      
T  20811379 tgcctttggggtattaaataaggggataaaaatagaaatataacattggaaattggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgtta 20811280  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccatt 160  Q
    ||| ||||||||||||  ||||||||||||| |||||||||    
T  20811279 aaatcaatgcaaacatgctacttttggcttctttaaccatt 20811239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 26831782 - 26831921
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    ||||||||||||| ||||| |||||||||||||| |||| ||||| |||||||| |||||||||||||||| |||||||||||| ||||| |||| ||||    
T  26831782 ccttggggcattgaataagaggataaaaatagaaatataatattgtaaaatggtaaaaagtgataaatttatctttttaaaaattaaaatgttgttgaaa 26831881  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
     ||||||||||||  |||||||| |||| ||||| ||||||    
T  26831882 -caatgcaaacatgctacttttgacttctttaacgattgcc 26831921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 27839299 - 27839414
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||| |||||| |||||| |||||||||||| ||||||||| ||||||| || |      
T  27839299 tgcccttggggcattggataagggaataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaagtttttaaaagtcaaaatgttatta 27839398  T
Q  121 aaaccaatgcaaacat 136  Q
    ||||||||||||||||    
T  27839399 aaaccaatgcaaacat 27839414  T

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Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 50514618 - 50514747
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    ||||||||||| |||||||| ||||| ||||  |||| |||||||| ||||||||||||||||||||||||||| | ||||| |||| ||||||||||||    
T  50514618 cattggataagaggataaaa-tagaaatataacattgaaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgca 50514716  T
Q  132 aacat-atacttttggcttccttaaccattg 161  Q
    |||||  ||||||||| ||||||||||||||    
T  50514717 aacatgctacttttggtttccttaaccattg 50514747  T

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Target: chr4; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 35675183 - 35675308
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||| ||||  ||||||||||||| ||| ||||||| |||| |||||||||||| ||||||||||||||||| | |||||||||| |    
T  35675183 tgcccttggggcattggttaagacgataaaaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaactttttaaaagttaaaatattgttg 35675282  T
Q  121 aaaccaatgcaaacata-tacttttg 145  Q
    ||  ||||||||||||| ||||||||    
T  35675283 aattcaatgcaaacatactacttttg 35675308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 54339223 - 54339087
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||||||||||||||| |||||||||||| || ||||  |||| ||||||||||||| |||||||||||| ||||||||| |||||||||| | ||||||    
T  54339223 ttggggcattggataaagggataaaaatataaatataacattgaaaaatggtgaaaa-tgataaatttaattttttaaaagtcaaaatatttttgaaacc 54339125  T
Q  126 aatgcaaacat-atacttttggcttccttaaccattgc 162  Q
    |||| ||| ||  |||||||| ||||||||||||||||    
T  54339124 aatgtaaatatgctacttttgacttccttaaccattgc 54339087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 19876186 - 19876257
Alignment:
Q  31 gcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaacttttta 102  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  19876186 gcattggataaggggataaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaacttttta 19876257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 40436192 - 40436056
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    ||||| ||||||||||||||||||||||  ||  |||| |||  |||||| |||||| | ||||||||||||||||||| ||||||||||||| ||||||    
T  40436192 ttgggacattggataaggggataaaaatgaaaaaatagcattaaaaaatgatgaaaaataataaatttaactttttaaatatcaaaatattgttgaaacc 40436093  T
Q  126 aatgcaaacat-atacttttggcttccttaaccattg 161  Q
    || ||||||||  ||||||||| || |||||||||||    
T  40436092 aaagcaaacatgctacttttggttttcttaaccattg 40436056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 31487837 - 31487745
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaat 113  Q
    ||||||||| |||||| ||||||||||||||||| || ||||| |||| ||||| || ||||||||||||||| |||||||||| ||||||||    
T  31487837 tgcccttggagcattgaataaggggataaaaataaaaatatagcattgaaaaatagttaaaagtgataaatttgactttttaaagatcaaaat 31487745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 45088145 - 45088043
Alignment:
Q  59 tatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaacc 157  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||| ||| ||||||   ||| |||| ||||||||||||| ||||||||| ||||||||||    
T  45088145 tatagcattggaaaatgatgaaaagtgataaatttaattttttgaaagtcaaaa---tgttgaaatcaatgcaaacatactacttttggtttccttaacc 45088049  T
Q  158 attgcc 163  Q
    ||||||    
T  45088048 attgcc 45088043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 51290543 - 51290473
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaattta 94  Q
    ||||||| |||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||    
T  51290543 ccttgggacattggataaggggataaaattagaaatatagcattggaaaatgatgaaaagtgataaattta 51290473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 52341694 - 52341581
Alignment:
Q  44 ggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tactt 142  Q
    ||||| |||||||| |||  | |||||||||| |||||| |||| ||||||||||||||||| ||||||| |||| ||| |||||||||||||| || ||    
T  52341694 ggatacaaatagaaatattatgttggaaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatgcaaacatactaatt 52341595  T
Q  143 ttggcttccttaac 156  Q
    |||| |||||||||    
T  52341594 ttggtttccttaac 52341581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 30618065 - 30617930
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||||||||| |||| ||||||| |||||| ||| | ||||| ||||| |||||||  || ||||||||||||||||| |  ||||||||| |    
T  30618065 tgcccttagggcattggttaagaggataaacatagaaatattgcattgggaaatgatgaaaagcaatgaatttaactttttaaaagttcaaatattgttg 30617966  T
Q  121 aaaccaatgcaaacata-tacttttggcttccttaa 155  Q
    || ||||||||| | || ||||||||| ||||||||    
T  30617965 aatccaatgcaatcctactacttttggtttccttaa 30617930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 31494658 - 31494797
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    ||||||||||| | ||||  |||||||||||||  || ||||| | ||||||||||||||||  ||||||||||||||||   ||||| ||||| |||      
T  31494658 cttggggcattagttaagatgataaaaatagaaacattgtatttggaaatggtgaaaagtgaagaatttaactttttaaatgacaaaacattgttgaatt 31494757  T
Q  125 caatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
    ||||| ||| ||| ||||||||| ||||||||||||||||    
T  31494758 caatgtaaatatattacttttggtttccttaaccattgcc 31494797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 9693528 - 9693606
Alignment:
Q  85 gataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaaccattgc 162  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||||  || ||||| ||||||||||||||||    
T  9693528 gataaatttaactttttaaaagtcgaaatattgttgaaaccaatgcaaacatgctatttttgacttccttaaccattgc 9693606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 15986349 - 15986239
Alignment:
Q  54 agaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaaca-tatacttttggcttcct 152  Q
    |||| ||| |||||| |||||||||||||||| | ||||||| ||||||||| ||| |||||||| |||  ||||||||||| | ||||||| | |||||    
T  15986349 agaaatattgtattgaaaaatggtgaaaagtggtgaatttaaatttttaaaagtcagaatattgttgaattcaatgcaaacattctacttttagtttcct 15986250  T
Q  153 taaccattgcc 163  Q
    |||||||||||    
T  15986249 taaccattgcc 15986239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 53566948 - 53567087
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaag---tgataaatttaactttttaaaaatcaaaatattgtcgaa 122  Q
    |||||||||||| ||| | ||||||||||||| ||||| |||| ||||| || |||||   | |||||||||||||||||||| | ||||| |||| |||    
T  53566948 ttggggcattggttaaagagataaaaatagaaatatagcattgaaaaatagtaaaaagtactaataaatttaactttttaaaagttaaaatgttgttgaa 53567047  T
Q  123 accaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||  ||||||||||  |||||||| |||||||||| ||||    
T  53567048 actcatgcaaacatgctacttttgacttccttaactattg 53567087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 46695955 - 46696026
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatt 92  Q
    |||| |||||| |||||||||| ||||||||||| || ||||| |||| |||||||||||||||||||||||    
T  46695955 tgcctttggggtattggataagtggataaaaataaaaatataggattgaaaaatggtgaaaagtgataaatt 46696026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 48513724 - 48513590
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||| ||||  |||||||||| ||  || |||||| |||||| |||||||||| | |||||||||||||||| |||||| ||||| |||  |||||||    
T  48513724 cattggttaagacgataaaaataaaaacattgtattgaaaaatgatgaaaagtgaaagatttaactttttaaaagtcaaaacattgttgaattcaatgca 48513625  T
Q  132 aacata-tacttttggcttccttaaccattgcctt 165  Q
    |  |||  | |||||| ||||||||||||||||||    
T  48513624 agtataccaattttggtttccttaaccattgcctt 48513590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 35511184 - 35511257
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    |||||| ||||  ||| ||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  35511184 cattggttaagtagatgaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttgactttttaaaa 35511257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 39158322 - 39158455
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||| ||||||| |||| | | |||||||  | ||| ||||||| ||| |||||||||||||  |||||||||||||||||| ||||||||||  ||     
T  39158322 ccttggagcattggctaagagaacaaaaataagaatattgtattgggaaagggtgaaaagtgatctatttaactttttaaaaattaaaatattgttcaat 39158421  T
Q  124 ccaatgcaaacata-tacttttggcttccttaac 156  Q
     ||||| ||||||| ||||||||  |||||||||    
T  39158422 tcaatgtaaacatactacttttgatttccttaac 39158455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 36 - 163
Target Start/End: Complemental strand, 20456670 - 20456542
Alignment:
Q  36 ggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaaca 135  Q
    ||||||| |||||||||||||| | |  ||||| |||||| |||||||| || ||||||| ||||||||  | |||||||||| |||  |||||||||||    
T  20456670 ggataagaggataaaaatagaaatgttttattgaaaaatgatgaaaagttatgaatttaaatttttaaatgttaaaatattgttgaattcaatgcaaaca 20456571  T
Q  136 t-atacttttggcttccttaaccattgcc 163  Q
    |  ||||||||  |||||||| |||||||    
T  20456570 tgctacttttgatttccttaatcattgcc 20456542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 20435807 - 20435874
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa 112  Q
    |||||||||||||  || || ||||||||| |||||||||||  ||||||||||||||||||||||||    
T  20435807 gataaaaatagaaacattgtcttggaaaattgtgaaaagtgaagaatttaactttttaaaaatcaaaa 20435874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 51018396 - 51018515
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttt 143  Q
    |||||||||||||  || | |||| |||||||||||||||||  ||||||||||||||||||| |||| ||||| |||  ||||| ||| ||| ||||||    
T  51018396 gataaaaatagaaacattgcattgaaaaatggtgaaaagtgaagaatttaactttttaaaaattaaaacattgttgaattcaatgtaaatatactacttt 51018495  T
Q  144 tggcttccttaaccattgcc 163  Q
    |   ||| ||||||||||||    
T  51018496 taatttctttaaccattgcc 51018515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 3769906 - 3769832
Alignment:
Q  44 ggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||  ||||| ||| | |||| |||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  3769906 ggataaatttagaaatattgcattgaaaaatggtgaaaagtgataaatttgactttttaaaagttaaaatattgt 3769832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 46823545 - 46823491
Alignment:
Q  64 tattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||| |||||    
T  46823545 tattggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaaaattgt 46823491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 13498120 - 13498224
Alignment:
Q  31 gcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgc 130  Q
    ||||||| ||||  ||||||||||||| ||| |||||||||||| || || |  ||| ||||||||||||||||| ||||||  |||| ||| ||||||     
T  13498120 gcattggttaagatgataaaaatagaaatattgtattggaaaatagtaaagaacgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 13498219  T
Q  131 aaaca 135  Q
    |||||    
T  13498220 aaaca 13498224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 31010420 - 31010516
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattg 117  Q
    ||||||||| ||||||| ||||  |||||||||||||  || ||||||  ||||| | ||||||||  ||||||||||||||||| |||||| ||||    
T  31010420 tgcccttggagcattggttaagatgataaaaatagaaacattgtattgagaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattg 31010516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 36486722 - 36486774
Alignment:
Q  64 tattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatatt 116  Q
    |||||||||||||||||||||||  ||||||| ||||||||| ||||||||||    
T  36486722 tattggaaaatggtgaaaagtgaagaatttaattttttaaaagtcaaaatatt 36486774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 9693380 - 9693454
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaacttttt 101  Q
    |||| |||||||||||||||||||||||| |  |||| |||| ||||| |||||||| |||||||||||| |||||    
T  9693380 ttggcgcattggataaggggataaaaataaagatataatatt-gaaaaaggtgaaaaatgataaatttaaattttt 9693454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 11996138 - 11996180
Alignment:
Q  63 gtattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  11996138 gtattggaaaatggtgaaaagtgatagatttaactttctaaaa 11996180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 52895816 - 52895698
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttt 143  Q
    |||||||||||||  || ||||||  |||| ||||||||||| || ||||||||||||||| |||||| ||  | |||  ||||| ||| ||| ||| ||    
T  52895816 gataaaaatagaaacattgtattgagaaattgtgaaaagtgaaaattttaactttttaaaagtcaaaacatgcttgaactcaatgtaaatatactacatt 52895717  T
Q  144 tggcttccttaaccattgc 162  Q
    ||| |||||||||||||||    
T  52895716 tggtttccttaaccattgc 52895698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 35927315 - 35927379
Alignment:
Q  69 gaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaa 133  Q
    ||||||||||||||  ||| ||||||||||||||||| | |||||||||| ||| | ||||||||    
T  35927315 gaaaatggtgaaaaacgatgaatttaactttttaaaagttaaaatattgttgaatctaatgcaaa 35927379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 16559987 - 16560041
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatg 75  Q
    ||||||||||||||||||||| || |||||||||||| | | || ||||||||||    
T  16559987 tgcccttggggcattggataaaggaataaaaatagaaattttgtgttggaaaatg 16560041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 23690980 - 23691054
Alignment:
Q  89 aatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaaccattgc 162  Q
    |||||||| ||||||||||||||| ||||| |||  ||||| ||| ||| || |||||| |||||||||||||||    
T  23690980 aatttaaccttttaaaaatcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgc 23691054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 29722074 - 29722160
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaat 107  Q
    ||||||| ||||||||| || ||| | |||||||||  ||| || ||| || |||||||||| |||| ||||||||||||| |||||    
T  29722074 tgcccttagggcattggttaggggaacaaaaatagatatattgtgttgaaatatggtgaaaaatgatgaatttaactttttcaaaat 29722160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 40593688 - 40593638
Alignment:
Q  50 aaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttt 100  Q
    |||||||| ||| ||||||| |||| |||||||||||| ||||||||||||    
T  40593688 aaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaactttt 40593638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 1457586 - 1457663
Alignment:
Q  79 aaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaa 155  Q
    |||| |||||||||||| ||||||||| | |||||||||| |||  |||||||||| || ||||||||  ||||||||    
T  1457586 aaaattgataaatttaattttttaaaagttaaaatattgttgaattcaatgcaaacttattacttttgatttccttaa 1457663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 1801668 - 1801635
Alignment:
Q  71 aaatggtgaaaagtgataaatttaactttttaaa 104  Q
    |||||||||||||| |||||||||||||||||||    
T  1801668 aaatggtgaaaagttataaatttaactttttaaa 1801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 29462909 - 29462800
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    ||||||||  |||| ||||||||||| || |||  ||||| |||||| |||||| |||  ||||| | ||||| ||| ||||||| |||| ||| |||||    
T  29462909 gggcattgtttaagaggataaaaataaaaatattatattgaaaaatgatgaaaaatgaggaattttattttttcaaagtcaaaatgttgttgaatccaat 29462810  T
Q  129 gcaaacatat 138  Q
    | ||||||||    
T  29462809 gtaaacatat 29462800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 49483170 - 49483133
Alignment:
Q  64 tattggaaaatggtgaaaagtgataaatttaacttttt 101  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  49483170 tattggaaaatggtgaaaagtgatagatttgacttttt 49483133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 966630 - 966590
Alignment:
Q  89 aatttaactttttaaaaatcaaaatattgtcgaaaccaatg 129  Q
    ||||||||||||||||||| |||||||||| ||| ||||||    
T  966630 aatttaactttttaaaaattaaaatattgttgaatccaatg 966590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 29 - 57
Target Start/End: Original strand, 19328748 - 19328776
Alignment:
Q  29 gggcattggataaggggataaaaatagaa 57  Q
    |||||||||||||||||||||||||||||    
T  19328748 gggcattggataaggggataaaaatagaa 19328776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 22665798 - 22665762
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaa 57  Q
    |||||||||||||||||||||||| | ||||||||||    
T  22665798 tgcccttggggcattggataagggaacaaaaatagaa 22665762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 23260797 - 23260725
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaag-tgataaatttaactttttaaaaatcaaaatatt 116  Q
    |||||||||| || ||| | ||||  ||||||||||||| |||| ||||||||||||||||| | ||||||||    
T  23260797 gataaaaataaaaatattgcattgagaaatggtgaaaagctgatgaatttaactttttaaaagttaaaatatt 23260725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 27545960 - 27545881
Alignment:
Q  39 taaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaacttttt-aaaaatcaaaatattgt 118  Q
    |||| |||||||||||||| ||| | |||| |||||| | ||||||||| ||||||||||||| |||| | ||||||||||    
T  27545960 taagaggataaaaatagaaatattgcattgaaaaatgat-aaaagtgatgaatttaactttttgaaaacttaaaatattgt 27545881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 31463286 - 31463350
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtg 85  Q
    ||||||||||||||||||||| || | |||||||||| | | || ||||||| |||| |||||||    
T  31463286 tgcccttggggcattggataaaggaacaaaaatagaaattttgtgttggaaagtggtaaaaagtg 31463350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 42627116 - 42627176
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    ||||||||||||| ||| || || | |||||||||| | |||| |||||||||||||||||    
T  42627116 gataaaaatagaaatattgttttaggaaatggtgaagaatgatgaatttaactttttaaaa 42627176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 53411838 - 53411874
Alignment:
Q  71 aaatggtgaaaagtgataaatttaactttttaaaaat 107  Q
    |||||||||||||||||||||| || |||||||||||    
T  53411838 aaatggtgaaaagtgataaattcaattttttaaaaat 53411874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 53484720 - 53484624
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    |||||||||||   ||||||||| |||||| |||||| |||||||  ||||  ||| ||||||||||| ||||| | ||||| |||| ||| |||||    
T  53484720 cattggataagaaaataaaaataaaattattgtattgaaaaatgggaaaaaaagatgaatttaactttctaaaagttaaaatgttgtggaatccaat 53484624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 4e-49; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 36730146 - 36730289
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||  ||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  36730146 tgcccttatggcattggataaggggataaaaatataaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttg 36730245  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  36730246 aaaccaatgcaaacatgctacttttggcttccttaaccattgcc 36730289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 8715498 - 8715634
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  8715498 ccttagggcattggataagggg-taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaa 8715596  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccatt 160  Q
    |||||||||||||  ||||||| |||||||||||||||    
T  8715597 ccaatgcaaacatgctacttttagcttccttaaccatt 8715634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 9067385 - 9067521
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  9067385 ccttagggcattggataagggg-taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaa 9067483  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccatt 160  Q
    |||||||||||||  ||||||| |||||||||||||||    
T  9067484 ccaatgcaaacatgctacttttagcttccttaaccatt 9067521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 32415685 - 32415541
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||| |||||||||||| ||||||||||||||| ||||| |||| ||||| ||||||||| |||||||||||||||||||| ||||||| |||| |    
T  32415685 tgcccttgaggcattggataaagggataaaaatagaaatatagcattgaaaaattgtgaaaagtcataaatttaactttttaaaagtcaaaatgttgttg 32415586  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcct 164  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||    
T  32415585 aaaccaatgcaaacatgttacttttggtttccttaaccattgcct 32415541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 51817308 - 51817448
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||| |||||||| ||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  51817308 cctttgggcattgaataagaggataaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaa 51817407  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    | ||| |||||||  ||||||||||||||||||||||||||    
T  51817408 ctaatacaaacatgctacttttggcttccttaaccattgcc 51817448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 44570379 - 44570522
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||| ||||| ||||| ||||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| |    
T  44570379 tgcccttggggcattcgataaagggatcaaaatagaaatataacattggaaaatggtgaaaagtgataactttaactttttaaaagtcaaaatgttgttg 44570478  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||| ||||||||||||  ||||||||||||||||||||||||||    
T  44570479 aaatcaatgcaaacatgctacttttggcttccttaaccattgcc 44570522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 4759848 - 4759978
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||| ||||||||||| ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  4759848 ttggagcattggataaagggataaaaatagaaatatagcattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaacc 4759947  T
Q  126 aatgcaaacat-atacttttggcttccttaa 155  Q
    |||||||||||  ||||||||||||||||||    
T  4759948 aatgcaaacatgttacttttggcttccttaa 4759978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 29915568 - 29915709
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| |||| | |||||||||||||||||||| ||||||| | || |    
T  29915568 tgcccttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaagtcaaaatgtggttg 29915667  T
Q  121 aaaccaatgcaaaca-tatacttttggcttccttaaccattg 161  Q
    ||||||||||||||| | |||||||||||||||||| |||||    
T  29915668 aaaccaatgcaaacattctacttttggcttccttaatcattg 29915709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 29964721 - 29964862
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| |||| | |||||||||||||||||||| ||||||| | || |    
T  29964721 tgcccttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaagtcaaaatgtggttg 29964820  T
Q  121 aaaccaatgcaaaca-tatacttttggcttccttaaccattg 161  Q
    ||||||||||||||| | |||||||||||||||||| |||||    
T  29964821 aaaccaatgcaaacattctacttttggcttccttaatcattg 29964862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 37509227 - 37509086
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||| |||||||||||||||||||||||||||| ||| |  || |||||||||| |||||||||||||||||||||||||||||| |||||||||||| |    
T  37509227 tgcctttggggcattggataaggggataaaaattgaaatgcagcattggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttg 37509128  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||||||||||||| ||  |||||||| |||||||||||||||    
T  37509127 aaaccaatgcaaatatgttacttttgacttccttaaccattg 37509086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 52570872 - 52570755
Alignment:
Q  47 taaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata---tacttt 143  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||   ||||||    
T  52570872 taaaaatagaaatatagtattggaaaatggtgaaaagtgataaatataactttttaaaagtcaaaatattgttgaaaccaatgcaaacatatgctacttt 52570773  T
Q  144 tggcttccttaaccattg 161  Q
    |||| |||||||||||||    
T  52570772 tggcatccttaaccattg 52570755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 46317602 - 46317461
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||| | |||||||||||  ||||||||||||| ||||  ||||||||||| |||||| |||||||||||||||||||||| ||||||| |||| |    
T  46317602 tgcccttgagacattggataagtagataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttg 46317503  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  46317502 aaaccaatgcaaacatgttacttttggcttccttaaccattg 46317461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 8847449 - 8847588
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    |||||| |||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||| ||||||||||||||||| | |||||||||| ||||     
T  8847449 cttgggacattggataaggggataaaaatagaaatataacattggaaaatggtaaaaagtgattaatttaactttttaaaagttaaaatattgttgaaaa 8847548  T
Q  125 caatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||| ||||||  ||||||||| ||||||||||||||||    
T  8847549 caatgtaaacatgctacttttggtttccttaaccattgcc 8847588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 10854979 - 10854834
Alignment:
Q  21 tgcccttggggcattggataaggggat----aaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatatt 116  Q
    |||||||||||||||||||||||||||    |||| ||||| ||||| |||||||||||||||||| | |||||||||||||||||||| | ||||| ||    
T  10854979 tgcccttggggcattggataaggggatggataaaagtagaaatatagcattggaaaatggtgaaaactaataaatttaactttttaaaagttaaaatgtt 10854880  T
Q  117 gtcgaaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    || |||||||||||||||||  |||||||||||||||||| |||||    
T  10854879 gttgaaaccaatgcaaacatgctacttttggcttccttaatcattg 10854834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 12051142 - 12051011
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    |||||||||||  |||||||||||| |||||||||| |||||  |||||| |||||||||||||||||||||||| ||||| |||| |||| ||||||||    
T  12051142 attggataaggaaataaaaatagaaatatagtattgtaaaataatgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaa 12051043  T
Q  133 acat-atacttttggcttccttaaccattgcc 163  Q
    ||||  ||||||||||||||||||||||||||    
T  12051042 acatgctacttttggcttccttaaccattgcc 12051011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 35306448 - 35306305
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||  ||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||| | ||||| || | |    
T  35306448 tgcccttgggcaattggataaggggataaaaatagaaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaagttaaaatgttattg 35306349  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||| ||||||||||||  ||||||||| |||||||| |||||||    
T  35306348 aaatcaatgcaaacatgctacttttggtttccttaagcattgcc 35306305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 44695669 - 44695796
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    ||||| ||||||||||||||||||||||| || |||| | ||||||||||||||||| |||||||||||||||||||||||| ||||| |||| |||| |    
T  44695669 ttgggacattggataaggggataaaaatataaatataatcttggaaaatggtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaatc 44695768  T
Q  126 aatgcaaacat-atacttttggcttcct 152  Q
    |||||||||||  |||||||||||||||    
T  44695769 aatgcaaacatgttacttttggcttcct 44695796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 25102315 - 25102457
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||| |||||||||| | ||||||||||||| ||||| ||||||||||||| |||||||||||| |||| ||||| ||| | |||||||||| |    
T  25102315 tgcccttgggacattggataatgagataaaaatagaaatatagcattggaaaatggtaaaaagtgataaa-ttaatttttttaaagttaaaatattgttg 25102413  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||||||| ||  ||||||||| ||||||||| ||||||    
T  25102414 aaaccaatgcaaatatgctacttttggtttccttaactattgcc 25102457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 12905292 - 12905415
Alignment:
Q  37 gataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat 136  Q
    ||||||||||||||||||||| ||||  |||| ||||||||||||| ||||||||||||| |||||||| ||||||| |||| |||||||||||||||||    
T  12905292 gataaggggataaaaatagaaatataacattg-aaaatggtgaaaaatgataaatttaacattttaaaagtcaaaatgttgttgaaaccaatgcaaacat 12905390  T
Q  137 -atacttttggcttccttaaccatt 160  Q
      ||||||| |||||||||| ||||    
T  12905391 gctactttttgcttccttaatcatt 12905415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 18780 - 18888
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||||||||| |||| |||||||||||||| ||| | ||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||| |    
T  18780 tgcccttagggcattggttaagaggataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttg 18879  T
Q  121 aaaccaatg 129  Q
    || ||||||    
T  18880 aatccaatg 18888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 45899540 - 45899672
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtg-aaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||||||||||||||| | |||||||||||| |||  |||||||||||| || ||||||||| ||||||| ||||||||| |||||||||||| |||     
T  45899540 cttggggcattggataagagaataaaaatagaaatattatattggaaaatgatgaaaaagtgatgaatttaaatttttaaaagtcaaaatattgttgaat 45899639  T
Q  124 ccaatgcaaacata-tacttttggcttccttaa 155  Q
     ||||| ||||||| ||||||||| ||||||||    
T  45899640 tcaatgtaaacatactacttttggtttccttaa 45899672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 1804001 - 1803920
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||| ||| |||| |||||||||||||||| |||||    
T  1804001 ccttggggcattggataaggggataaaaatagaaatatattattgaaaaagggtaaaaaatgataaatttaactttgtaaaa 1803920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 41346050 - 41345951
Alignment:
Q  62 agtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaac-atatacttttggcttccttaaccatt 160  Q
    ||||||| ||||| ||||||||| |||||||||| ||||||||| | |||||||||| ||||||||||||||| ||||| ||||| ||| ||||||||||    
T  41346050 agtattgaaaaatagtgaaaagtaataaatttaattttttaaaagttaaaatattgttgaaaccaatgcaaacaatatatttttgcctttcttaaccatt 41345951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 31647364 - 31647278
Alignment:
Q  77 tgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaaccattgc 162  Q
    |||||| |||||||||||||||||||||| ||||||| || | |||| ||||||||||||  |||||||||||||||||||||||||    
T  31647364 tgaaaaatgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgctacttttggcttccttaaccattgc 31647278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 49976157 - 49976231
Alignment:
Q  44 ggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||||||||||| ||||||   |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  49976157 ggataaaaatagaattattgtattgactaatggtgaaaagtgatgaatttaactttttaaaagtcaaaatattgt 49976231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 34060761 - 34060873
Alignment:
Q  24 ccttggggcattggataaggggataaaaa-tagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaa 122  Q
    |||||| ||||||| ||||  |||||||| || || ||| |||||| |||||||||||||||||| ||||||||||||||||| | |||||||||| |||    
T  34060761 ccttggtgcattggttaagaagataaaaaataaaaatattgtattgaaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaa 34060860  T
Q  123 accaatgcaaaca 135  Q
      |||||||||||    
T  34060861 ttcaatgcaaaca 34060873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 18946 - 19029
Alignment:
Q  46 ataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatg 129  Q
    |||||||||||| ||| | ||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||    
T  18946 ataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatccaatg 19029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 20227405 - 20227514
Alignment:
Q  53 tagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttcc 151  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||| |||||| | ||||| || | ||||||||| |||||||  |||||||| |||||    
T  20227405 tagaaatatagcattgaaaaatgatgaaaagtgataaatttaacttcttaaaagttaaaatgttattgaaaccaatacaaacatgttacttttgacttcc 20227504  T
Q  152 ttaaccattg 161  Q
    |||| |||||    
T  20227505 ttaatcattg 20227514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 48136719 - 48136790
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaac 96  Q
    |||||||| |||||||||||| |||||||||||| ||||| |||||||||| ||| |||||||||||||||||    
T  48136719 ccttggggtattggataagggaataaaaatagaaatatagcattggaaaattgtg-aaagtgataaatttaac 48136790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 34750294 - 34750363
Alignment:
Q  65 attggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaac 134  Q
    |||||||| |||||||||||||| |||||||||||||| |||| |||||||||| ||| ||||| |||||    
T  34750294 attggaaactggtgaaaagtgatgaatttaactttttataaattaaaatattgttgaatccaatacaaac 34750363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 48313836 - 48313928
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||||  ||||   ||||||||||||  || ||||||| ||||||||||||| || |||||| |||||||||||||||||| |||||    
T  48313836 ttggggcattgattaagatcataaaaatagaaacattgtattgggaaatggtgaaaagcgaaaaatttgactttttaaaaatcaaaacattgt 48313928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 11317037 - 11316970
Alignment:
Q  66 ttggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaa 133  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||| | ||| | ||||||||    
T  11317037 ttggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaatattattgaatctaatgcaaa 11316970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 11675405 - 11675293
Alignment:
Q  43 gggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tact 141  Q
    ||||||||||||||| ||| |||||| |||||||| |||  |||  ||||||||||||||||  |||||||||||| ||| ||||||| ||| ||  |||    
T  11675405 gggataaaaatagaaatattgtattgaaaaatggtaaaa--tgacgaatttaactttttaaatgtcaaaatattgttgaatccaatgctaacctaccact 11675308  T
Q  142 tttggcttccttaac 156  Q
    ||||| |||||||||    
T  11675307 tttggtttccttaac 11675293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 21324603 - 21324515
Alignment:
Q  49 aaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacatat 138  Q
    ||||||||| ||| | |||||||| || |||||||||||| |||||||||||||||| | |||||||||| ||| || |||||| |||||    
T  21324603 aaaatagaaatattgcattggaaa-tgatgaaaagtgatagatttaactttttaaaagttaaaatattgttgaatccgatgcaatcatat 21324515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 41346387 - 41346346
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagta 65  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  41346387 ccttggggcattggataaggggataaaaatagaaatatagta 41346346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 13647047 - 13647110
Alignment:
Q  39 taaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaacttttta 102  Q
    |||| |||||||||||||| ||| | |||| ||||| |||||||||||| ||||||||||||||    
T  13647047 taagaggataaaaatagaaatattggattgaaaaatagtgaaaagtgatgaatttaacttttta 13647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 39436563 - 39436497
Alignment:
Q  39 taaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 105  Q
    |||| |||||||||||||| ||| |||||| ||||||||||||| | |  |||||||||||||||||    
T  39436563 taagaggataaaaatagaaatattgtattgaaaaatggtgaaaaataaagaatttaactttttaaaa 39436497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 12060052 - 12060149
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||| |||||| ||||| |||| ||| |||  ||||| ||| ||||||||||||| |||||||||||| |||| | ||||||||| | |||| |||||    
T  12060052 tgcctttggggtattggttaagaggacaaatttagaaatattgtattggaaaatgatgaaaagtgatagatttgagtttttaaaagttaaaaaattgt 12060149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 26850510 - 26850582
Alignment:
Q  44 ggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatatt 116  Q
    ||||||||||| || |||  |||| ||||||||| ||||||||| ||||||| ||||||||| | ||||||||    
T  26850510 ggataaaaatataaatattatattagaaaatggtaaaaagtgatgaatttaattttttaaaagttaaaatatt 26850582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 4298404 - 4298362
Alignment:
Q  70 aaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa 112  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||    
T  4298404 aaaatggtgaaaagtgatagatttgactttttaaaaattaaaa 4298362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 39974826 - 39974906
Alignment:
Q  48 aaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    ||||||| || ||| | ||| ||||||| ||| ||||||| ||||||||||||||||| | |||||| ||| ||| |||||    
T  39974826 aaaaataaaaatattgcattagaaaatgatgagaagtgatgaatttaactttttaaaagttaaaatagtgttgaatccaat 39974906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 6e-48; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 6999312 - 6999175
Alignment:
Q  27 tggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacca 126  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| |||||||    
T  6999312 tggggcaatggataaggagataaaaatagaaatatagtattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaacca 6999213  T
Q  127 atgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  6999212 atgcaaacatgctacttttggcttccttaaccattgcc 6999175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 862705 - 862562
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||| |    
T  862705 tgcccttagggcattgaataatgggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaagagtcaaaatcttgttg 862606  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||||||||||  |||||||||||||||||| |||||||    
T  862605 aaaccaatgcaaacatgctacttttggcttccttaatcattgcc 862562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 27495235 - 27495096
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    |||||||||||| ||||||||||||||||| || ||||  ||| |||||||||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  27495235 cttggggcattgaataaggggataaaaataaaaatataacattagaaaatggtgaaaagtgataaatttaacattttaaaaatcaaaatgttgttgaaac 27495136  T
Q  125 caatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  27495135 caatgcaaacatactacttttgacttccttaaccattgcc 27495096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 39401528 - 39401670
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||||||||||||| ||||||||||||||||| ||||||| |||| |    
T  39401528 tgcccttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgat-aatttaactttttaaaagtcaaaattttgttg 39401626  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||||||| |||||||  ||||||||||||||||||||||||||    
T  39401627 aaaccaatacaaacatgctacttttggcttccttaaccattgcc 39401670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 16361682 - 16361524
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||| |||||||||||||| |||||||||||| ||||  ||||||||||||| |||| |||||||||||||||| ||||| ||||||| ||||||    
T  16361682 tgcccttggagcattggataagggaataaaaatagaaatataacattggaaaatggtaaaaattgataaatttaactttataaaagtcaaaatgttgtcg 16361583  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc---ttagcaagaccc 175  Q
    ||||||||||||||||  |||||||||||||||||| |||||||   ||||||||||||    
T  16361582 aaaccaatgcaaacatgttacttttggcttccttaatcattgccctgttagcaagaccc 16361524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 765143 - 765258
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |    
T  765143 tgcccttggggcattggataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttg 765242  T
Q  121 aaaccaatgcaaacat 136  Q
    ||||||||||||||||    
T  765243 aaaccaatgcaaacat 765258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 2966645 - 2966513
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||    
T  2966645 cattggataaggggataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgca 2966546  T
Q  132 aacat-atacttttggcttccttaaccattgcc 163  Q
    || ||  ||||||| ||||||||||||||||||    
T  2966545 aatatgctacttttagcttccttaaccattgcc 2966513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 44299679 - 44299815
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||||||||||| |||| |||||||||||||| |||||  | | ||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  44299679 ttggggcattgggtaagaggataaaaatagaaatatagcctcgaaaaatggtgaaaagtgataaatttaacattttaaaagtcaaaatattgttgaaacc 44299778  T
Q  126 aatgcaaacata-tacttttggcttccttaaccattg 161  Q
    |||| || |||| || |||||||||||||||||||||    
T  44299779 aatgtaagcatactatttttggcttccttaaccattg 44299815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 41436582 - 41436451
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    |||| ||||||||||||||||| || |||||||||| |||||| |||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||    
T  41436582 attgaataaggggataaaaataaaaatatagtattgaaaaatgatgaaaagtgataaacttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 41436483  T
Q  133 acat-atacttttggcttccttaaccattgcc 163  Q
    ||||  |||||||| |||| ||||||||||||    
T  41436482 acatgctacttttgacttcattaaccattgcc 41436451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 39085789 - 39085927
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    |||||| |||||||||| ||||||||||||||| ||||  ||||||||||| | ||||||||||||||||||||||||||| ||||||| |||| ||||     
T  39085789 cttgggacattggataaagggataaaaatagaaatataacattggaaaatgataaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaat 39085888  T
Q  125 caatgcaaacat-atacttttggcttccttaaccattgc 162  Q
    ||||||||||||  | |||||| ||||||||||||||||    
T  39085889 caatgcaaacatgctgcttttgacttccttaaccattgc 39085927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 33726496 - 33726355
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| | |||||||||||||| ||||| | |||||||||| |    
T  33726496 tgcccttggggcattggataaggggataaaaataaaaatatagtattgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaatattgttg 33726397  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||| |||| |||||||  || |||||  ||||||||||||||    
T  33726396 aaatcaatacaaacatgctatttttgatttccttaaccattg 33726355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 35445285 - 35445423
Alignment:
Q  23 cccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaacttttt-aaaaatcaaaatattgtcga 121  Q
    ||||| |||||||| ||||||||||||||||| || ||||  |||| |||||||||||||||||||||||||||||||| |||| |||||||||||| ||    
T  35445285 cccttagggcattgaataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaactttttcaaaagtcaaaatattgttga 35445384  T
Q  122 aaccaatgcaaacat-atacttttggcttccttaaccat 159  Q
    ||||||| |||||||  |||||||| ||| |||||||||    
T  35445385 aaccaatacaaacatgctacttttgacttgcttaaccat 35445423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 17056051 - 17056193
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||||||||||||| |||||||||| |||| ||||  | |  ||||||||||||||||||||||||||||||||||||  |||||| |||| |    
T  17056051 tgcccttagggcattggataaagggataaaaaaagaaatataacacta-aaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttg 17056149  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||||||| ||  || |||||||||||||||||||||||    
T  17056150 aaaccaatgcaaatatgctatttttggcttccttaaccattgcc 17056193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 17068498 - 17068640
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||||||||||||| |||||||||| |||| ||||  | |  ||||||||||||||||||||||||||||||||||||  |||||| |||| |    
T  17068498 tgcccttagggcattggataaagggataaaaaaagaaatataacacta-aaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttg 17068596  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||||||| ||  || |||||||||||||||||||||||    
T  17068597 aaaccaatgcaaatatgctatttttggcttccttaaccattgcc 17068640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 17118377 - 17118506
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||||||| ||||||||||||||| |||| || ||||||||| |||||| |||||||||||||||||||||| || |||| |||| ||||||||||||    
T  17118377 cattggataaagggataaaaatagaaatataatactggaaaatgttgaaaaatgataaatttaactttttaaaactc-aaatgttgttgaaaccaatgca 17118475  T
Q  132 aacat-atacttttggcttccttaaccattg 161  Q
    || ||  || |||||||||||||||||||||    
T  17118476 aatatgttatttttggcttccttaaccattg 17118506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 33864471 - 33864359
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||| | ||||| ||||| ||||||||||| || ||| | |||||||||||||||||||| ||||||||||| |||||||| |||||||||||| |    
T  33864471 tgcccttgagacattgaataagaggataaaaataaaaatatcgcattggaaaatggtgaaaagtaataaatttaacattttaaaagtcaaaatattgttg 33864372  T
Q  121 aaaccaatgcaaa 133  Q
    |||||||||||||    
T  33864371 aaaccaatgcaaa 33864359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 17074481 - 17074623
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||||||| ||||| ||||||||||||||| ||||  | |  ||||||||||||||||||||||||||||||||||||  |||||| |||| |    
T  17074481 tgcccttagggcattagataaagggataaaaatagaaatataacacta-aaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttg 17074579  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||| |||||||| ||  || |||||||||||||||||||||||    
T  17074580 aaactaatgcaaatatgctatttttggcttccttaaccattgcc 17074623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 17603927 - 17603812
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||| | ||||||||||||| ||||| |||| |||||| | |||| |||||||||||||||||||||| ||||||| || | |    
T  17603927 tgcccttggggcattggataacgcgataaaaatagaaatatagcattgaaaaatgataaaaaatgataaatttaactttttaaaagtcaaaatgttattg 17603828  T
Q  121 aaaccaatgcaaacat 136  Q
    ||| ||||||||||||    
T  17603827 aaatcaatgcaaacat 17603812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 1321281 - 1321147
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||| |||||||||||| |||||||||||||| ||||  ||||||||||||| |||| | |||||||||||| ||||||||||||||| |||| ||||    
T  1321281 ccttggagcattggataagaggataaaaatagaaatataacattggaaaatggtaaaaaataataaatttaactctttaaaaatcaaaatgttgttgaaa 1321182  T
Q  124 ccaatgcaaacat-atacttttggcttccttaacc 157  Q
     ||||| ||||||  ||  ||||||||||||||||    
T  1321181 tcaatgtaaacatgctaactttggcttccttaacc 1321147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 23685656 - 23685788
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||| ||||||||||||           ||||||||||| |||||||||||||||||||||||||||| ||||||| || | |    
T  23685656 tgcccttggggcattggataaagggataaaaata-----------ttggaaaatggggaaaagtgataaatttaactttttaaaagtcaaaatgttattg 23685744  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||| ||||||||||||  |||||||||||||||||| |||||||    
T  23685745 aaatcaatgcaaacatgttacttttggcttccttaaacattgcc 23685788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 44173211 - 44173099
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacatatactttt 144  Q
    ||||||||||||| ||||| |||| |||||| |||||| |||||||||||| ||||||||||| ||||| |||| ||||||||| |||||||||  ||||    
T  44173211 gataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaattttttaaaaattaaaatgttgttgaaaccaatacaaacatattatttt 44173112  T
Q  145 ggcttccttaacc 157  Q
    |||||| ||||||    
T  44173111 ggcttctttaacc 44173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 11659378 - 11659235
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||| ||||| | |||| ||||||||||| || ||| |||||| ||||| |||||||||||  ||||||||||||||||||| |||||||||| |    
T  11659378 tgcccttggagcattcgttaagaggataaaaataaaaatattgtattgaaaaatagtgaaaagtgaagaatttaactttttaaaaattaaaatattgttg 11659279  T
Q  121 aaaccaatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
    ||  ||||| ||| ||| | ||||||| ||||||||||||||||    
T  11659278 aattcaatgtaaatatactgcttttggtttccttaaccattgcc 11659235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 13997913 - 13998012
Alignment:
Q  37 gataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat 136  Q
    |||||||| |||||||||||| ||||| |||| ||||| ||||||| |||||||||||||||||||||||| |||||||||| |||| |||| |||||||    
T  13997913 gataagggaataaaaatagaaatatagcattgaaaaattgtgaaaaatgataaatttaactttttaaaaattaaaatattgttgaaatcaatacaaacat 13998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 17095068 - 17095202
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    ||||||||||||| ||||||||||||||| ||||    |  |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  17095068 gggcattggataaagggataaaaatagaaatataactcta-aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaat 17095166  T
Q  129 gcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||| ||  || |||||  ||||||||||||||||    
T  17095167 gcaaatatgctatttttgcattccttaaccattgcc 17095202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 32 - 163
Target Start/End: Original strand, 9201499 - 9201630
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||||||| | ||||||||||| | |||| ||||  |||||||||||||||||||||||||||||||||||| ||||||| |||| | ||||||| ||    
T  9201499 cattggataatgagataaaaataggaatataatattaaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttg-aaccaataca 9201597  T
Q  132 aacat-atacttttggcttccttaaccattgcc 163  Q
    |||||  |||||||| |||| ||||| ||||||    
T  9201598 aacatgttacttttgacttctttaactattgcc 9201630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 15004987 - 15004905
Alignment:
Q  77 tgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaacca 158  Q
    ||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||| ||||||||| |||| |||||||    
T  15004987 tgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatgatacttttgacttctttaacca 15004905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 12695231 - 12695373
Alignment:
Q  23 cccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtg--aaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||||||| ||||  |||||||||||||  || ||||||||||||||||  |||||| |  |||||||||||||||||||||||| ||||| |    
T  12695231 cccttggagcattggttaagatgataaaaatagaaacattgtattggaaaatggtgtgaaaagtaaagaatttaactttttaaaaatcaaaacattgttg 12695330  T
Q  121 aaaccaatgcaaacatatacttttggcttccttaaccattgcc 163  Q
    ||  ||||| ||| |||   |||| | ||||||||||||||||    
T  12695331 aattcaatgtaaatatactatttttgtttccttaaccattgcc 12695373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 34334167 - 34334290
Alignment:
Q  34 ttggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaa 133  Q
    |||||||||  ||||||||||||| ||| ||||| ||||||||| |||| ||| ||||| ||||||||| |||| |||||||||| ||| ||||| ||||    
T  34334167 ttggataagatgataaaaatagaaatattgtatttgaaaatggtaaaaaatgacaaattaaactttttacaaattaaaatattgttgaatccaatacaaa 34334266  T
Q  134 cat-atacttttggcttccttaac 156  Q
    |||  ||||||| | |||||||||    
T  34334267 catgctacttttagtttccttaac 34334290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 11445379 - 11445454
Alignment:
Q  88 aaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaaccattgc 162  Q
    |||||||||||||||||  ||||||| |||| |||||||||||||||||  ||||||||| |||||||||||||||    
T  11445379 aaatttaactttttaaatgtcaaaatgttgttgaaaccaatgcaaacatgttacttttggtttccttaaccattgc 11445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 2239687 - 2239572
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||| |||| ||||||| |||||| ||| | | || |||||||| |||| |||| ||||||||||||||||| | |||||||||| ||| ||||| ||    
T  2239687 cattggttaagaggataaagatagaaatattgcaatgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaatattgttgaatccaataca 2239588  T
Q  132 aacata-tacttttgg 146  Q
    || ||| |||||||||    
T  2239587 aatatactacttttgg 2239572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 43140328 - 43140411
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatatt 116  Q
    |||||||||| ||||||||||| || ||||  |||| ||||||  ||||| |||||||||||||||||||||| | ||||||||    
T  43140328 attggataagaggataaaaataaaaatataacattgaaaaatgacgaaaaatgataaatttaactttttaaaattaaaaatatt 43140411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 34220650 - 34220736
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||| |||| |||||||||||||| | | | ||||| || |||||||||||||| ||||||| ||||||||| | ||||||||||    
T  34220650 cattggttaagaggataaaaatagaaatcttgcattgggaagtggtgaaaagtgatgaatttaagtttttaaaagttaaaatattgt 34220736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 37230311 - 37230253
Alignment:
Q  46 ataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaa 104  Q
    |||| ||||||| ||| |||||| ||||||||||||||||||||| |||||||||||||    
T  37230311 ataagaatagaaatattgtattgaaaaatggtgaaaagtgataaacttaactttttaaa 37230253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 2805488 - 2805381
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaact--ttttaaaaatcaaaatattgtcgaaaccaatg 129  Q
    |||||| |||| ||||||||||| || ||| |||||| |||||  | ||||||||| |||||||||  |||||||| |||||||||||| ||| | |||     
T  2805488 cattggttaagaggataaaaatataagtattgtattgaaaaataattaaaagtgatgaatttaactttttttaaaagtcaaaatattgttgaatctaata 2805389  T
Q  130 caaacata 137  Q
    ||||||||    
T  2805388 caaacata 2805381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 747526 - 747581
Alignment:
Q  63 gtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||||| ||||||||||||| |||||||||||||||| | |||| |||||    
T  747526 gtattggaaaatagtgaaaagtgatagatttaactttttaaaagttaaaaaattgt 747581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 464896 - 464770
Alignment:
Q  37 gataaggggataaaaatagaattatagtattggaaaatggtgaaaag-tgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaaca 135  Q
    ||||| ||||||||||||||| ||||  |||| |||||||| ||||  |||||| ||||||||||||||| | ||||| || | |||| |||| ||||||    
T  464896 gataaagggataaaaatagaaatataacattgaaaaatggtaaaaaaatgataattttaactttttaaaagttaaaatgttattgaaatcaatacaaaca 464797  T
Q  136 t-atacttttggcttccttaaccattg 161  Q
    |  |||||||  ||||||||| |||||    
T  464796 tgttacttttaacttccttaatcattg 464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 2136529 - 2136416
Alignment:
Q  44 ggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tactt 142  Q
    |||||||||||||| ||| | ||||||||||| |||||||||   ||||| |||||| |||| | |||||||||| |||  |||| ||||| || || ||    
T  2136529 ggataaaaatagaaatattgcattggaaaatgatgaaaagtggagaatttgacttttgaaaagtgaaaatattgttgaatacaatacaaacctactaatt 2136430  T
Q  143 ttggcttccttaac 156  Q
    |||| |||||||||    
T  2136429 ttggtttccttaac 2136416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 11445313 - 11445364
Alignment:
Q  50 aaatagaattatagtattggaaaatggtgaaaagtgataaatttaacttttt 101  Q
    |||||||| ||||  |||| ||||||||||||| ||||||||||||||||||    
T  11445313 aaatagaaatataacattgaaaaatggtgaaaaatgataaatttaacttttt 11445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 31911200 - 31911235
Alignment:
Q  63 gtattggaaaatggtgaaaagtgataaatttaactt 98  Q
    |||||||||||||||||||||||||| |||||||||    
T  31911200 gtattggaaaatggtgaaaagtgatagatttaactt 31911235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 34512720 - 34512665
Alignment:
Q  63 gtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||| |||||||||||||||||||| |||| ||||||||||| | |||| |||||    
T  34512720 gtattagaaaatggtgaaaagtgatagatttgactttttaaaagttaaaaaattgt 34512665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 74 - 112
Target Start/End: Complemental strand, 10001887 - 10001849
Alignment:
Q  74 tggtgaaaagtgataaatttaactttttaaaaatcaaaa 112  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  10001887 tggtgaaaagtgataaatttaagtttttaaaaattaaaa 10001849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 10522880 - 10522810
Alignment:
Q  48 aaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||  || ||||||||||||||||||||||  | |||||||||||| |||| | |||| |||||    
T  10522880 aaaaatagaaaaattgtattggaaaatggtgaaaagttgtgaatttaacttttcaaaagtaaaaaaattgt 10522810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 29260167 - 29260257
Alignment:
Q  67 tggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacatat-acttttggcttccttaac 156  Q
    |||||||||||||||||||||| |||| |||||| |||| | |||| ||||| |||  |||||| ||| ||| | |||||| |||||||||    
T  29260167 tggaaaatggtgaaaagtgatagatttgacttttaaaaagttaaaaaattgttgaattcaatgcgaacttatcatttttggtttccttaac 29260257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 40798342 - 40798413
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||||||  || ||||||||||||  ||||||||||   |||||||||||||||| |||||| |||||    
T  40798342 gataaaaatagaaacattgtattggaaaat--tgaaaagtgaaggatttaactttttaaaagtcaaaacattgt 40798413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 41890141 - 41890240
Alignment:
Q  50 aaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggct 148  Q
    |||||||| ||| ||||||||||||| ||||||||||| ||        ||||||| | |||||||||| ||| ||||||||||| || ||||||||| |    
T  41890141 aaatagaaatattgtattggaaaatgatgaaaagtgatgaa--------tttaaaagttaaaatattgttgaatccaatgcaaacctactacttttggtt 41890232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 32949598 - 32949526
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||| |||||||| |||||||||| ||||| |  |||| |||| ||||| ||||||||||||| ||||||||||    
T  32949598 gatacaaatagaaatatagtattgaaaaatagcaaaaa-tgatgaatttgactttttaaaaattaaaatattgt 32949526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 8327085 - 8327001
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatatt 116  Q
    |||||| |||| ||||||||||| || ||| |  |||  ||||  |||||||||| |||||||||||||||||| | ||||||||    
T  8327085 cattggttaagaggataaaaataaaaatattgctttgagaaataatgaaaagtgaaaaatttaactttttaaaagttaaaatatt 8327001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 34392568 - 34392636
Alignment:
Q  45 gataaaaatagaattatagta-ttggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa 112  Q
    |||||||||||||| || ||| |||||||||||| |||| |||  ||||||| ||||||||| ||||||    
T  34392568 gataaaaatagaatcattgtaattggaaaatggttaaaaatgaagaatttaattttttaaaagtcaaaa 34392636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 3e-47; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 19389303 - 19389462
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || |    
T  19389303 tgcccttggggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttg 19389402  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgccttagcaagacccttttt 180  Q
    ||| ||||||||||||  ||||||||  ||||||||||| ||  ||||||||||| |||||    
T  19389403 aaaacaatgcaaacatgctacttttgatttccttaaccaatg-gttagcaagaccgttttt 19389462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 8018866 - 8018733
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgc- 130  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||     
T  8018866 cattggataaggggataaaaatagaaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgttaaaactaatgca 8018767  T
Q  131 aaacata-tacttttggcttccttaaccattgcc 163  Q
    ||||||| ||||||||||||||||||||||||||    
T  8018766 aaacatactacttttggcttccttaaccattgcc 8018733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 45338117 - 45337983
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||| ||||||||||||||||||||||||||||| ||||  |||| ||||||||||||| |||||||||||||||||||||||||||||| || | || |    
T  45338117 cctttgggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaaatgataaatttaactttttaaaaatcaaaatgttattgaga 45338018  T
Q  124 ccaatgcaaacata-tacttttggcttccttaacc 157  Q
    |||||||||||||| ||||||||| ||||||||||    
T  45338017 ccaatgcaaacatactacttttggtttccttaacc 45337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 25249345 - 25249449
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgca 131  Q
    |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  25249345 cattggataagggggtaaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgca 25249444  T
Q  132 aacat 136  Q
    |||||    
T  25249445 aacat 25249449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 10694920 - 10694781
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||| | ||||||||||||||| |||||| || |||||||||  |||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||    
T  10694920 ccttggtgtattggataaggggattaaaataaaaatatagtatttaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaa 10694821  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgc 162  Q
     ||||||||| || ||||||||||||||||||||||||||    
T  10694820 tcaatgcaaatatgatacttttggcttccttaaccattgc 10694781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 4990039 - 4989909
Alignment:
Q  31 gcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgc 130  Q
    ||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||  ||||||   ||| |||||||||||    
T  4990039 gcattggataaggggataaaaatagaaatatagcattggaaaatagtgaaaaatgataaatttaactttttaaatgtcaaaa---tgttgaaaccaatgc 4989943  T
Q  131 aaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||  |||||||| |||||||||||||||||    
T  4989942 aaacatgctacttttgacttccttaaccattgcc 4989909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 18069062 - 18068951
Alignment:
Q  37 gataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaaca- 135  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||||| ||||||||||     
T  18069062 gataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaggtcaaaatgttgttgaaactaatgcaaacat 18068963  T
Q  136 tatacttttggc 147  Q
    ||||||||||||    
T  18068962 tatacttttggc 18068951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 21016350 - 21016235
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||| ||||||| |||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||| ||||||| |||| |    
T  21016350 tgcctttggggctttggataaggggataaaaatagaaatataatattgaaaaatggtgaaaagtgatagatttaactttttaaaagtcaaaatgttgttg 21016251  T
Q  121 aaaccaatgcaaacat 136  Q
    || |||||||||||||    
T  21016250 aagccaatgcaaacat 21016235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 21016050 - 21016185
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||| ||| ||| |||||||||||||||||||||||| ||||  |||| |||||||| |||||||||| |||||||||||||||| ||||||| |||| |    
T  21016050 tgcctttgaggctttggataaggggataaaaatagaaatataacattgaaaaatggttaaaagtgatagatttaactttttaaaagtcaaaatgttgttg 21016149  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaa 155  Q
    || |||||||||||||  |||||||| |||||||||    
T  21016150 aagccaatgcaaacatgctacttttgacttccttaa 21016185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 6939268 - 6939159
Alignment:
Q  27 tggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacca 126  Q
    |||||||||| |||| | ||||||||||||| ||||  |||| |||||||||| ||||||||||||||||||||||||| ||||||| |||| |||||||    
T  6939268 tggggcattgaataatgagataaaaatagaaatataacattgaaaaatggtgacaagtgataaatttaactttttaaaagtcaaaatgttgttgaaacca 6939169  T
Q  127 atgcaaacat 136  Q
    ||||||||||    
T  6939168 atgcaaacat 6939159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 26195383 - 26195481
Alignment:
Q  38 ataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat 136  Q
    |||||||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||| | ||||| |||| ||||||||| |||||||    
T  26195383 ataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatacaaacat 26195481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 6433635 - 6433518
Alignment:
Q  46 ataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tactttt 144  Q
    ||||||||| || ||||| |||| |||||||| |||||| |||||||||||||||||||| | ||||||||||  ||||||||||||| ||| |||||||    
T  6433635 ataaaaataaaaatatagcattgaaaaatggtaaaaagttataaatttaactttttaaaagttaaaatattgttaaaaccaatgcaaagatactactttt 6433536  T
Q  145 ggcttccttaaccattgc 162  Q
    | ||||||||||||||||    
T  6433535 gtcttccttaaccattgc 6433518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 34713924 - 34714048
Alignment:
Q  33 attggataaggggataaaaataga-at-tatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgc 130  Q
    |||| ||||||||||||||||||| || |||||||||| ||||||||| |||||||||||||| |||| |||||| ||||||| |||| |||||||||||    
T  34713924 attgaataaggggataaaaatagatatatatagtattgaaaaatggtgcaaagtgataaatttcacttcttaaaagtcaaaatgttgttgaaaccaatgc 34714023  T
Q  131 aaacat-atacttttggcttcctta 154  Q
    ||||||  |||||||| ||||||||    
T  34714024 aaacatgctacttttgacttcctta 34714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 37433369 - 37433238
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    ||||||||||||||||||||| ||  ||||  |||| |||||| ||||||||||||||||||||||||| ||| | ||||| |||| |||||||||||||    
T  37433369 attggataaggggataaaaatcgacatataacattgaaaaatgatgaaaagtgataaatttaacttttt-aaagttaaaatgttgttgaaaccaatgcaa 37433271  T
Q  133 acata-tacttttggcttccttaaccattgcct 164  Q
    ||||| |||||||  ||||||||| ||||||||    
T  37433270 acatactacttttaacttccttaatcattgcct 37433238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 3174568 - 3174436
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaata----ttgtcgaaac 124  Q
    |||| |||||| ||||||||||||||||| |||  ||||||||||||||||||| | |||||||| ||||||||||| ||||||||    |||| |||||    
T  3174568 gggcgttggatgaggggataaaaatagaaatattatattggaaaatggtgaaaaattataaatttgactttttaaaagtcaaaataaatgttgttgaaac 3174469  T
Q  125 caatgcaaacat-atacttttggcttccttaac 156  Q
    |||| |||||||  |||||||||||||||||||    
T  3174468 caatacaaacatgctacttttggcttccttaac 3174436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 7532893 - 7532767
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||  ||||||||| |   |||||||| ||| |||||    
T  7532893 gggcattggttaaggggataaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttaggtttttaaaagt--taatattgttgaatccaat 7532796  T
Q  129 gcaaacata-tacttttggcttccttaac 156  Q
     ||||| || ||||||||| |||||||||    
T  7532795 tcaaacctactacttttggtttccttaac 7532767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 14855394 - 14855513
Alignment:
Q  38 ataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat- 136  Q
    |||||||||||||||||||| |||||||||  ||||| |||||||| |||||||||||| |||||||| | ||||| ||||  |||| |||||||||||     
T  14855394 ataaggggataaaaatagaaatatagtattaaaaaatagtgaaaagagataaatttaacattttaaaagttaaaatgttgttaaaactaatgcaaacatg 14855493  T
Q  137 atacttttggcttccttaac 156  Q
     ||||||||| |||||||||    
T  14855494 ctacttttggtttccttaac 14855513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 26672894 - 26672763
Alignment:
Q  33 attggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaa 132  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||| | ||||  ||||||||||| ||||||||| ||||||| |||| |||||||||  ||    
T  26672894 attggataaagggataaaaatagaaatatagcattggaaaatgataaaaaaggataaatttaattttttaaaagtcaaaatgttgttgaaaccaatataa 26672795  T
Q  133 acat-atacttttggcttccttaaccattgcc 163  Q
    ||||  || |||||  ||||||||||||||||    
T  26672794 acatcgtatttttgatttccttaaccattgcc 26672763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 44874431 - 44874308
Alignment:
Q  31 gcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgc 130  Q
    |||||||||||||||||||||||| || ||||  |||| |||||||||||||||||||||||||| |||||||||         |||| |||||||||||    
T  44874431 gcattggataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaaatttttaaaa--------gttgttgaaaccaatgc 44874340  T
Q  131 aaacat-atacttttggcttccttaaccattg 161  Q
    ||||||  |||||||| |||||||||||||||    
T  44874339 aaacatgctacttttgtcttccttaaccattg 44874308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 5129449 - 5129541
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaat 113  Q
    ||||||| | ||||| ||||||||||||||||| ||| ||||| |||| |||||| ||||||||||||||||||| ||||||||| |||||||    
T  5129449 tgcccttagagcatttgataaggggataaaaattgaaatatagcattgaaaaatgatgaaaagtgataaatttaattttttaaaagtcaaaat 5129541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 35930252 - 35930167
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaa 106  Q
    ||||||||| ||||||||||||  |||||||||| || |||||||||| |||||| |||||| | |||||||||||||||||||||    
T  35930252 tgcccttggagcattggataagaagataaaaataaaaatatagtattgaaaaatgatgaaaaataataaatttaactttttaaaaa 35930167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 39 - 137
Target Start/End: Complemental strand, 26892884 - 26892786
Alignment:
Q  39 taaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata 137  Q
    |||| |||||||||||||| |||| ||||| ||||| || |||| |||||||||||||||||||||| | |||||||| | ||||| |||  |||||||    
T  26892884 taagaggataaaaatagaaatataatattgaaaaattgtaaaaaatgataaatttaactttttaaaagttaaaatattattgaaactaatataaacata 26892786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 162
Target Start/End: Complemental strand, 38870116 - 38869978
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    ||||||||||||  ||||  |||||||||||||  || | ||||||||||| ||||||||||  |||| ||| |||||||| |||||||||||  |||      
T  38870116 cttggggcattgattaagatgataaaaatagaaacattgcattggaaaatgatgaaaagtgaagaattcaacattttaaaagtcaaaatattgatgaatt 38870017  T
Q  125 caatgcaaacata-tacttttggcttccttaaccattgc 162  Q
    ||||| ||| ||| ||||||||| |||||| ||||||||    
T  38870016 caatgtaaatatactacttttggtttccttgaccattgc 38869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 11332787 - 11332884
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||| ||| |||||||| ||||  ||||||||||||| ||| ||||||  |||||||| |||||||  ||||||||||||||||| |||||| |||||    
T  11332787 tgccattgtggcattggttaagaagataaaaatagaaatattgtattgagaaatggtgtaaagtgaagaatttaactttttaaaagtcaaaacattgt 11332884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 34421311 - 34421408
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||  ||||| ||||  |||||||||||||  || ||||| | |||||||||||| ||| ||||| ||||||||||||||||||| |||||    
T  34421311 tgcccttgggaaattggttaagatgataaaaatagaaacattgtatttggaaatggtgaaaaatgaaaaattcaactttttaaaaatcaaaacattgt 34421408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 6841707 - 6841779
Alignment:
Q  39 taaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaa 111  Q
    |||| |||||||||||||| ||| ||||| ||||||| |||||||||||  || |||||||||||||||||||    
T  6841707 taagaggataaaaatagaaatattgtattagaaaatgatgaaaagtgatgtatataactttttaaaaatcaaa 6841779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 33741523 - 33741579
Alignment:
Q  77 tgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaa 133  Q
    |||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  33741523 tgaaaaatgataaatttaactttttaaaagttaaaatattgttgaaaccaatgcaaa 33741579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 39972145 - 39972281
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    ||||||| ||||||||| ||||  || |||  ||||| | | ||||||| ||||||||||||||||| ||||| ||||||||||| | |||| |||||      
T  39972145 tgcccttagggcattggttaagaagacaaatttagaaatgttgtattgggaaatggtgaaaagtgatgaatttgactttttaaaagttaaaaaattgttc 39972244  T
Q  121 aaaccaatgcaaacata-tacttttggcttccttaac 156  Q
    ||  ||||||||||||| || |||||| |||||||||    
T  39972245 aattcaatgcaaacatactatttttggtttccttaac 39972281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 31596438 - 31596511
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||||| ||| || ||  ||||||||||||| |||| ||||| ||||||||||| ||||||||||||    
T  31596438 gataaaaatagaaatattgtgttaaaaaatggtgaaaaatgatgaattttactttttaaaagtcaaaatattgt 31596511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 20212433 - 20212528
Alignment:
Q  72 aatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaaccattgcctta 166  Q
    |||||||||||||||| ||||||| ||||||||| | ||||||| || ||| |||||| |||| |  ||||||||| ||||||||| | |||||||    
T  20212433 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaacaagtgcctta 20212528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 18808983 - 18808941
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatag 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  18808983 tgcccttggggcattggataaggggataaaagtataattatag 18808941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 8810573 - 8810524
Alignment:
Q  63 gtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa 112  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||| ||||    
T  8810573 gtattgggaaatggtgaaaagtaatagatttaactttttaaaaattaaaa 8810524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 30351637 - 30351590
Alignment:
Q  91 tttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacatat 138  Q
    ||||||||||||||| | |||||||||| ||| |||||||||||||||    
T  30351637 tttaactttttaaaagttaaaatattgttgaatccaatgcaaacatat 30351590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 37922972 - 37923038
Alignment:
Q  70 aaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata 137  Q
    |||||||| |||||| || |||||||||||||| || |||||||||| | ||| ||||||||||||||    
T  37922972 aaaatggt-aaaagtaatgaatttaactttttagaagtcaaaatattattgaatccaatgcaaacata 37923038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 19976483 - 19976545
Alignment:
Q  21 tgcccttggggcattggataag-gggataaaaatagaattatagtattggaaaatggtgaaaa 82  Q
    |||| ||||||| ||||||||| ||||||||| ||||| |||| ||||| |||||||||||||    
T  19976483 tgcctttggggctttggataagtgggataaaagtagaaatataatattgaaaaatggtgaaaa 19976545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 24305033 - 24304932
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttt 143  Q
    ||||||||| ||| ||| |||||| |||| ||||||||||||  |||||||| ||||||| |||||||| |||| |||  ||||| ||| ||| ||||||    
T  24305033 gataaaaatggaaatattgtattgaaaaacggtgaaaagtgaagaatttaac-ttttaaagatcaaaattttgttgaattcaatgtaaatatactacttt 24304935  T
Q  144 tgg 146  Q
    |||    
T  24304934 tgg 24304932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 5300263 - 5300203
Alignment:
Q  97 tttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaac 156  Q
    ||||||||| |||||||||||| |||  |||||||||| || ||||||||| |||||||||    
T  5300263 tttttaaaagtcaaaatattgttgaattcaatgcaaacttactacttttggtttccttaac 5300203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 17320000 - 17320044
Alignment:
Q  74 tggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||| ||| ||||||||||||||||| | ||||||||||    
T  17320000 tggtgaaaagagatgaatttaactttttaaaagttaaaatattgt 17320044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 88; Significance: 6e-42; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 16773 - 16907
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||| |||||||| ||||||||||||| |||||||||||| |||||||||    
T  16773 gggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaat 16871  T
Q  129 gcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||  ||||||||||||||||||||||||||    
T  16872 gcaaacatgctacttttggcttccttaaccattgcc 16907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 26941 - 27075
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||| |||||||| ||||||||||||| |||||||||||| |||||||||    
T  26941 gggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaat 27039  T
Q  129 gcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||  ||||||||||||||||||||||||||    
T  27040 gcaaacatgctacttttggcttccttaaccattgcc 27075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 37107 - 37241
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||| |||||||| ||||||||||||| |||||||||||| |||||||||    
T  37107 gggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaat 37205  T
Q  129 gcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||||||||  ||||||||||||||||||||||||||    
T  37206 gcaaacatgctacttttggcttccttaaccattgcc 37241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 4e-37; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 5578390 - 5578247
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcg 120  Q
    |||||||| |||||||||| ||||||||||||||||| ||||| |||| |||||  ||| || |||||||||||||||||||||| |||||||||||| |    
T  5578390 tgcccttgaggcattggatgaggggataaaaatagaaatatagcattgaaaaataatgagaattgataaatttaactttttaaaagtcaaaatattgttg 5578291  T
Q  121 aaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||| |||||||||||  |||||||| |||||||||||||||||    
T  5578290 aaacaaatgcaaacatgctacttttgacttccttaaccattgcc 5578247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 12191604 - 12191466
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||| |||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||| ||||||| |||| |||| |    
T  12191604 ttggcgcattggataagtggataaaaatagaaatatagcattggtaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaatc 12191505  T
Q  126 aatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    ||| |||||||  |||||||| |||||||||||||||||    
T  12191504 aatacaaacatgctacttttgccttccttaaccattgcc 12191466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 7875201 - 7875317
Alignment:
Q  48 aaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttgg 146  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||  |||||||||    
T  7875201 aaaaatagaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcagacatgctacttttgg 7875300  T
Q  147 cttccttaaccattgcc 163  Q
    ||||||||| |||||||    
T  7875301 cttccttaatcattgcc 7875317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 6867026 - 6866916
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    ||||||||||||||||||||||||||||| || ||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||| |||| |||| |    
T  6867026 ttggggcattggataaggggataaaaataaaaatatagcatttgaaaatggtgaaaagtgataaatttaaccttttaaaagtcaaaatgttgttgaaatc 6866927  T
Q  126 aatgcaaacat 136  Q
    |||||||||||    
T  6866926 aatgcaaacat 6866916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 10855545 - 10855406
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||| |||||| ||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  10855545 ccttggggcatttgataaggggataaaaatagaaatataatattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaa 10855446  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    || ||||||| ||  ||||||||  ||| ||||||||||||    
T  10855445 cc-atgcaaatatgctacttttgatttctttaaccattgcc 10855406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 26572078 - 26572213
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||||||||||||||||||||||||||||||| |||||     ||||||| | |||||||||||||||||  |||||||| | ||||||||||  |||    
T  26572078 ccttggggcattggataaggggataaaaatagaaatatag-----gaaaatgataaaaagtgataaatttaatattttaaaagttaaaatattgttaaaa 26572172  T
Q  124 ccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||||||||||||  |||||||| |||||||||||||||||    
T  26572173 ccaatgcaaacatgctacttttgacttccttaaccattgcc 26572213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 29692334 - 29692426
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaat 113  Q
    |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| | |||||||    
T  29692334 tgcccttggggcattggataaatggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaagagtcaaaat 29692426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 7880447 - 7880563
Alignment:
Q  48 aaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttgg 146  Q
    |||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| ||| || ||||  |||||||||    
T  7880447 aaaaatagaaatatagcattagaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaatacagacatgctacttttgg 7880546  T
Q  147 cttccttaaccattgcc 163  Q
    ||||||||| |||||||    
T  7880547 cttccttaatcattgcc 7880563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 16437592 - 16437718
Alignment:
Q  30 ggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatg 129  Q
    ||||||||||||| |||||||||||||| ||||  ||||||||||||||||||        ||||||||||||||| | |||||||||| ||||||||||    
T  16437592 ggcattggataagtggataaaaatagaaatataacattggaaaatggtgaaaa--------tttaactttttaaaagtaaaaatattgttgaaaccaatg 16437683  T
Q  130 caaacat-atacttttggcttccttaaccattgcc 163  Q
    |||||||  |||| |||| ||||||||||||||||    
T  16437684 caaacatgctactgttggtttccttaaccattgcc 16437718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 7274212 - 7274349
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    ||||| ||||||| ||||| ||||| |||||| ||||  |||||||||||  ||||||||||||||||||| |||||||| | ||||| |||| |||| |    
T  7274212 ttgggacattggacaagggaataaatatagaaatataacattggaaaatgacgaaaagtgataaatttaacattttaaaagttaaaatgttgttgaaatc 7274311  T
Q  126 aatgcaaacat-atacttttggcttccttaaccattgc 162  Q
    ||| |||||||  ||||||||| |||||||| ||||||    
T  7274312 aatacaaacatgttacttttggtttccttaatcattgc 7274349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 8324101 - 8324238
Alignment:
Q  25 cttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaac 124  Q
    |||||||||||| |||||  |||||||||||||  |||| ||||  |||| ||||||| |||||||||||||||||||||||| ||||| |||| |||||    
T  8324101 cttggggcattgaataagaagataaaaatagaaacatagcattgagaaattgtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaac 8324200  T
Q  125 caatgcaaacat-atacttttggcttccttaaccattg 161  Q
    ||||  ||||||  || ||||  |||||||||||||||    
T  8324201 caatataaacatgttatttttaccttccttaaccattg 8324238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 31220325 - 31220455
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    ||||||||||||||||| ||||  |||| ||| ||| || ||| |||||||| ||||||||| ||||||||||||||||| | ||||| || | |||       
T  31220325 ttggggcattggataagaggatggaaatggaaatatcgttttgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatgttattgaataa 31220424  T
Q  126 aatgcaaacata-tacttttggcttccttaa 155  Q
    |||||||||||| ||||||||| ||||||||    
T  31220425 aatgcaaacatactacttttggtttccttaa 31220455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 28014743 - 28014638
Alignment:
Q  29 gggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaat 128  Q
    ||||||||| |||| || ||||| ||||| ||| ||||||| |||||||||||| |||| | ||| ||||||||||| | |||||||||| ||| |||||    
T  28014743 gggcattggttaagagggtaaaattagaaatattgtattgggaaatggtgaaaaatgatgagtttgactttttaaaagttaaaatattgttgaatccaat 28014644  T
Q  129 gcaaac 134  Q
    ||||||    
T  28014643 gcaaac 28014638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 32786331 - 32786259
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaattta 94  Q
    ||||||||||| |||||||||||| |||||||||||| ||||  ||||||||||||||||||| ||||||||||    
T  32786331 tgcccttggggtattggataaggg-ataaaaatagaaatataacattggaaaatggtgaaaagagataaattta 32786259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 12175652 - 12175535
Alignment:
Q  44 ggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tactt 142  Q
    ||||||||||| || |||||||||| |||||| | |||| |||||||||||||||||||||| | ||||  || |  ||||||||||||||||| |||||    
T  12175652 ggataaaaatataaatatagtattgaaaaatgataaaaactgataaatttaactttttaaaagttaaaa-gttattaaaaccaatgcaaacatactactt 12175554  T
Q  143 ttggcttccttaaccattg 161  Q
    ||   ||||||||||||||    
T  12175553 ttaagttccttaaccattg 12175535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 27127524 - 27127597
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    ||||||||||||| ||| ||||||  |||||||||||| |||| ||||||||||||||||| |||| |||||||    
T  27127524 gataaaaatagaaatattgtattgagaaatggtgaaaaatgatgaatttaactttttaaaagtcaagatattgt 27127597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 14232509 - 14232609
Alignment:
Q  46 ataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tactttt 144  Q
    ||||||||| || ||| | |||| |||||||||||||||||| |||||| ||||| |||| |||||| ||||||||| | |||| ||||||| |||||||    
T  14232509 ataaaaataaaaatattgaattgaaaaatggtgaaaagtgatgaatttagcttttcaaaagtcaaaacattgtcgaatctaatgtaaacatactactttt 14232608  T
Q  145 g 145  Q
    |    
T  14232609 g 14232609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 32786110 - 32786042
Alignment:
Q  96 ctttttaaaaatcaaaatattgtcgaaaccaatgcaaacat-atacttttggcttccttaaccattgcc 163  Q
    |||||||||| ||||||| |||| |||||||||||||||||  ||||||||| ||||||||||||||||    
T  32786110 ctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggtttccttaaccattgcc 32786042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 6507385 - 6507523
Alignment:
Q  24 ccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaa 123  Q
    |||||||| | ||| ||||  |||||||||||||   | | ||||| ||||  |||||||||| ||||||||||||||||||||||||| ||||| |||     
T  6507385 ccttggggtaatggttaagatgataaaaatagaaactttgcattgggaaatattgaaaagtgaaaaatttaactttttaaaaatcaaaacattgttgaat 6507484  T
Q  124 ccaatgcaaacata-tacttttggcttccttaaccattg 161  Q
     ||||| | | ||| ||||||||  ||||||||||||||    
T  6507485 tcaatgtatatatactacttttgatttccttaaccattg 6507523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 12775215 - 12775125
Alignment:
Q  32 cattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaa 122  Q
    |||||| |||| ||||||||||| || ||| |||||  ||| || |||||| |||| ||||||||||||||||| | ||||||||||||||    
T  12775215 cattggttaagaggataaaaatataaatattgtattaaaaactgatgaaaaatgattaatttaactttttaaaacttaaaatattgtcgaa 12775125  T

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Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 29964367 - 29964274
Alignment:
Q  71 aaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaaccattgcc 163  Q
    |||||||||||| | |  ||||||||||||||||| |||||| ||||| |||  ||||| ||| ||| || |||||| ||||||||||||||||    
T  29964367 aaatggtgaaaaataaataatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatattatttttgggttccttaaccattgcc 29964274  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 34780023 - 34780112
Alignment:
Q  73 atggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttttggcttccttaaccattg 161  Q
    ||||||||||||||  ||||||||||||||||| | |||| ||||| |||  ||||| ||| ||| ||||||||  ||||||||||||||    
T  34780023 atggtgaaaagtgaagaatttaactttttaaaagttaaaacattgttgaattcaatgtaaatatactacttttgatttccttaaccattg 34780112  T

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Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 12226329 - 12226465
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaacc 125  Q
    |||||||||| | ||||  |||||||||||||  || ||||||  ||||| | ||||||||  ||||||||||||| ||| | |||| ||||| |||  |    
T  12226329 ttggggcattagttaagatgataaaaatagaaacattgtattgagaaatgattaaaagtgaagaatttaactttttgaaagtaaaaacattgttgaattc 12226428  T
Q  126 aatgcaaacata-tacttttggcttccttaaccattg 161  Q
    |||| ||| ||| || |||||| ||||||||||||||    
T  12226429 aatgtaaatatactatttttggtttccttaaccattg 12226465  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 21186059 - 21186122
Alignment:
Q  70 aaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaa 133  Q
    |||||||| ||||||||| ||||||||||||||||| | |||||||| | ||| | ||||||||    
T  21186059 aaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattattgaatctaatgcaaa 21186122  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 12769294 - 12769223
Alignment:
Q  47 taaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaa 122  Q
    ||||||||||| |||| ||||| ||||||||||||| ||    |||||| ||||||||| | ||||||||||||||    
T  12769294 taaaaatagaaatataatattgaaaaatggtgaaaaatg----atttaaatttttaaaacttaaaatattgtcgaa 12769223  T

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Target: scaffold0002 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 392121 - 392261
Alignment:
Q  21 tgcccttggggcattggataaggggataaaaatagaattata----gtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatatt 116  Q
    |||||||| || ||| ||||| ||||||||| ||||| ||||    | |||| |||||||| ||||||||||||||||||||||||||| ||||||| ||    
T  392121 tgcccttgaggaattagataaagggataaaattagaaatatatatagcattgaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgtt 392220  T
Q  117 gtcgaaaccaatgcaaacat-atacttttggcttccttaac 156  Q
    || |||||| ||||||||||  ||||||| |||||||||||    
T  392221 gttgaaaccgatgcaaacatgctacttttcgcttccttaac 392261  T

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Target: scaffold0809 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 4268 - 4337
Alignment:
Q  26 ttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaa 95  Q
    ||||| |||||||||  |||||||||||| || ||||| |||||||||| ||||||||||||||||||||    
T  4268 ttgggacattggatagagggataaaaataaaaatatagcattggaaaattgtgaaaagtgataaatttaa 4337  T

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Target: scaffold0144 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 163
Target Start/End: Complemental strand, 39679 - 39562
Alignment:
Q  45 gataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgtcgaaaccaatgcaaacata-tacttt 143  Q
    |||||||||||||  || |||||||||||| ||||||| |||  ||||||||||||||||| ||  || ||||| |||  ||||| ||| ||| ||||||    
T  39679 gataaaaatagaaacattgtattggaaaatagtgaaaactgaagaatttaactttttaaaagtc--aacattgttgaattcaatgtaaatatactacttt 39582  T
Q  144 tggcttccttaaccattgcc 163  Q
    ||| ||||||||||||||||    
T  39581 tggtttccttaaccattgcc 39562  T

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Target: scaffold0169 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 9050 - 9098
Alignment:
Q  70 aaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgt 118  Q
    |||||||||||||||| | |||| |||||||||||| |||||| |||||    
T  9050 aaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaaattgt 9098  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 8725 - 8809
Alignment:
Q  22 gcccttggggcattggataaggggataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaa 106  Q
    ||||||||||||| |  || | ||||| |||| |||| || ||||| ||||||| |||||| |||| ||||||||||||| ||||    
T  8725 gcccttggggcatagattaggaggatagaaattgaataattgtattagaaaatgatgaaaaatgatgaatttaacttttttaaaa 8809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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