View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11564_low_2 (Length: 688)
Name: NF11564_low_2
Description: NF11564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11564_low_2 |
 | |
|
| [»] scaffold0267 (1 HSPs) |
| | |
|
| [»] scaffold0464 (1 HSPs) |
| | |
|
| [»] scaffold0867 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 569; Significance: 0; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 21 - 669
Target Start/End: Complemental strand, 10554144 - 10553496
Alignment:
| Q |
21 |
atgattggcctcgtgagtattattggctctatctatggaacccagctacaagaactaaatctagaagaaatatattatctttccctagtaattttaagtt |
120 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10554144 |
atgattggcctcatgagtattattggctctatctatggaacccagctacaagaactaaatctagaagaaatatattatctttccctagtaattttaagtt |
10554045 |
T |
|
| Q |
121 |
ctcttttgggtatgatatttcaagtaaaacatataaggtggtagcgtttcgtgtggatttggataaagagcgtggtaatgcaacaagtgtggtgaaagta |
220 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10554044 |
ctcttttggctatgatatttcaagtaaaacatataaggtggtagcgtttcgtgtggatttggataaagagcgtggtaatgcaacaagtgtggtgaaagta |
10553945 |
T |
|
| Q |
221 |
ttcaacattgcggataattcatggagaaacattcaatgcttccccgtgcttccactttactggtttaagcatgaaaagaacaatggtgtgtatttgagtg |
320 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |
|
|
| T |
10553944 |
ttcaacatggcggataattcatggagaaacattcaatgtttccccgtgcttccactttactggtttaagcgtgaaaagaacaatggtgtgtatttgaatg |
10553845 |
T |
|
| Q |
321 |
gtacaattaactggttgacccttcgcgattacttctattctgattatgaaattggtaatgttagtggtattactgttgagcaatatgtgattgtttcact |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||| |
|
|
| T |
10553844 |
gtacaattaactggttgacccttcgcgattacttctattctgattatgaaattggtaatgttagcaatattagtgttgcgcaatatgggattgtttcact |
10553745 |
T |
|
| Q |
421 |
agatctctcaactgagtcatacactgaatatttgctccctcggggttttgacgaggtgcctcgtgttcagccaacgcttgtgggtttgatcaattgtctt |
520 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| || |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10553744 |
tgatctctcaactgagtcatacactgaattgttgcttccccggggttttgacaaggtgtctcgtgttcagccaacgcttgtgggtttgatcaattgtctt |
10553645 |
T |
|
| Q |
521 |
tgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagttatg |
620 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10553644 |
tgcttttgtcatgatttcaagggaagccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagttatg |
10553545 |
T |
|
| Q |
621 |
agaatttccattcaagcgaatatttattgaaatttgaaacgatggagtt |
669 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10553544 |
agaatttccattcaagcgaatatttattgaaatttgaaacgatggagtt |
10553496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 545; E-Value: 0
Query Start/End: Original strand, 21 - 669
Target Start/End: Complemental strand, 10571874 - 10571226
Alignment:
| Q |
21 |
atgattggcctcgtgagtattattggctctatctatggaacccagctacaagaactaaatctagaagaaatatattatctttccctagtaattttaagtt |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
10571874 |
atgattggcctcgtgagtattattggctctatctatggaacccagctacaagaactaaatctagaagaacttcattatctttccctagtaattttaagtt |
10571775 |
T |
|
| Q |
121 |
ctcttttgggtatgatatttcaagtaaaacatataaggtggtagcgtttcgtgtggatttggataaagagcgtggtaatgcaacaagtgtggtgaaagta |
220 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10571774 |
ctcttttggctatgatatttcaagtaaaacatataaggtggtagcatttcgtgtggatttggataaagaacgtggtaatgcaacaagtgtggtgaaagta |
10571675 |
T |
|
| Q |
221 |
ttcaacattgcggataattcatggagaaacattcaatgcttccccgtgcttccactttactggtttaagcatgaaaagaacaatggtgtgtatttgagtg |
320 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10571674 |
ttcaacatggcggataattcaaggagaaacattcaatgtttccccgtgcttccactttactggtttaagcgtgaaaagaacaatggtgtgtatttgagtg |
10571575 |
T |
|
| Q |
321 |
gtacaattaactggttgacccttcgcgattacttctattctgattatgaaattggtaatgttagtggtattactgttgagcaatatgtgattgtttcact |
420 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10571574 |
gtacaattaactggatgacccttcgcgattacttctattctgattatgaaattggtaatgttagtagtattactgttgagcaatatgtgattgtttcact |
10571475 |
T |
|
| Q |
421 |
agatctctcaactgagtcatacactgaatatttgctccctcggggttttgacgaggtgcctcgtgttcagccaacgcttgtgggtttgatcaattgtctt |
520 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||| ||||||||||||| ||| ||||| |||||| |
|
|
| T |
10571474 |
tgatctctcaactgagtcatacactgaattgttgcttcctcggggttttgacgaggtgtcttgtgttcaaccaacgcttgtggttttaatcaactgtctt |
10571375 |
T |
|
| Q |
521 |
tgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagttatg |
620 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
10571374 |
tgcttttgtcatgatttcaagggaagtcatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgtttaaaattagttatg |
10571275 |
T |
|
| Q |
621 |
agaatttccattcaagcgaatatttattgaaatttgaaacgatggagtt |
669 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10571274 |
agaatttccattcaagcgaatatttattgaaatttgaaacgatggagtt |
10571226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 628
Target Start/End: Original strand, 10482014 - 10482260
Alignment:
| Q |
382 |
tagtggtattactgttgagcaatatgtgattgtttcactagatctctcaactgagtcatacactgaatatttgctccctcggggttttgacgaggtgcct |
481 |
Q |
| |
|
|||| |||||||| |||| | ||||||||| ||||||| ||||||||||||||| |||||||| ||| ||||| |||||||||||| | ||||| | |
|
|
| T |
10482014 |
tagtagtattactcctgagaagtatgtgattctttcacttgatctctcaactgagacatacactcaattgttgctacctcggggttttaataaggtgtca |
10482113 |
T |
|
| Q |
482 |
cgtgttcagccaacgcttgtgggtttgatcaattgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggag |
581 |
Q |
| |
|
||| ||| |||| ||||| || |||||| |||||||||| ||| ||||||||| ||| ||| || ||||| ||||| |||||| |||||||||| |
|
|
| T |
10482114 |
cgtcatcaaccaaagcttgcggttttgatggattgtctttgttttggtcatgattatgaggaaacttattttgttatatggcaaatgaaggattttggag |
10482213 |
T |
|
| Q |
582 |
ttcaagagtcttggattcagttgcttaacattagttatgagaatttc |
628 |
Q |
| |
|
|||| |||||||||||| || |||| |||| |||| |||||||| |
|
|
| T |
10482214 |
ttcagtcgtcttggattcaattatttaaaattacttatcagaatttc |
10482260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 245 - 596
Target Start/End: Original strand, 10460318 - 10460672
Alignment:
| Q |
245 |
agaaacattcaatgcttccccgtgcttccactttactggtttaagcatgaaaagaacaatggtgtgtatttgagtggtacaattaactggttgacccttc |
344 |
Q |
| |
|
||||| |||||||| || || || |||||||||| ||| || | | ||| |||||||| ||||||||||||| |||||| |||| ||||||| |||||| |
|
|
| T |
10460318 |
agaaatattcaatgtttacctgttattccactttattggatttatcgtgataagaacaacggtgtgtatttgaatggtactattagctggttggcccttc |
10460417 |
T |
|
| Q |
345 |
gcgattacttctattctgattatgaaattggt---aatgttagtggtattactgttgagcaatatgtgattgtttcactagatctctcaactgagtcata |
441 |
Q |
| |
|
||||||||| |||| ||||||| || || || | || || ||||||||||| ||||||||||||||||| | |||||||| ||||| |||| |
|
|
| T |
10460418 |
acgattactttgattcaaattatgatttttgttggaaagacggtagtgttactgttgagaaatatgtgattgtttcattggatctctcctctgagacata |
10460517 |
T |
|
| Q |
442 |
cactgaatatttgctccctcggggttttgacgaggtgcctcgtgttcagccaacgcttgtgggtttgatcaattgtctttgcttttgtcatgatttcaag |
541 |
Q |
| |
|
|||| | ||| | ||||||||||| || |||||||| ||| ||||||||| ||||||| |||||| | |||||||| || | | ||||||| ||| |
|
|
| T |
10460518 |
cactcagctgttgttgcctcggggtttcgatgaggtgccacgttatcagccaacacttgtggttttgatggactgtctttgtttctcttatgattttaag |
10460617 |
T |
|
| Q |
542 |
ggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttgga |
596 |
Q |
| |
|
||||| ||| |||| |||| | |||| ||||||||||||| ||||| |||| |
|
|
| T |
10460618 |
ggaactcattttgtgatatgacagatgaagaattttggagttcacgagtcatgga |
10460672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 391 - 600
Target Start/End: Original strand, 6388082 - 6388291
Alignment:
| Q |
391 |
tactgttgagcaatatgtgattgtttcactagatctctcaactgagtcatacactgaatatttgctccctcggggttttgacgaggtgcctcgtgttcag |
490 |
Q |
| |
|
||||||| |||||| ||||||| ||||||| ||||| |||| |||| ||||||| ||| |||||| ||||||| |||||| |||| || ||| |||| |
|
|
| T |
6388082 |
tactgttaagcaatgtgtgattctttcacttgatctatcaagtgagaaatacactcaatttttgcttcctcgggattttgataaggttccacgttatcag |
6388181 |
T |
|
| Q |
491 |
ccaacgcttgtgggtttgatcaattgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagt |
590 |
Q |
| |
|
|||| |||||| | |||||| |||||||| |||||||||||||| ||| ||| ||| |||| ||||| |||||| |||||||| | ||||||| |
|
|
| T |
6388182 |
ccaaagcttgttgttttgatgggctgtctttgtttttgtcatgattttgaggaaactcattctgttatatggcaaatgaaggattttggcgcccaagagt |
6388281 |
T |
|
| Q |
591 |
cttggattca |
600 |
Q |
| |
|
|||||||||| |
|
|
| T |
6388282 |
cttggattca |
6388291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 404 - 628
Target Start/End: Original strand, 10467898 - 10468121
Alignment:
| Q |
404 |
tatgtgattgtttcactagatctctcaactgagtcatacactgaatatttgctccctcggggttttgacgaggtgcctcgtgttcagccaacgcttgtgg |
503 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| |||||||| ||| ||||| ||||| |||||| | ||||| | ||| |||||||| || || || |
|
|
| T |
10467898 |
tatgtgattctttcacttgatctctcaactgagacatacactcaattgttgctacctcgaggtttt-ataaggtgtcacgtcatcagccaaagcctgcgg |
10467996 |
T |
|
| Q |
504 |
gtttgatcaattgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagtt |
603 |
Q |
| |
|
|||||| |||||||||| || ||||||||| ||| ||| || ||||| ||||| |||||| |||||||||||||| |||||||||||| || |
|
|
| T |
10467997 |
ttttgatggattgtctttgtttcggtcatgattatgaggaaacttattttgttatatggcaaatgaaggattttggagttcagtcgtcttggattcaatt |
10468096 |
T |
|
| Q |
604 |
gcttaacattagttatgagaatttc |
628 |
Q |
| |
|
|||| |||| |||| |||||||| |
|
|
| T |
10468097 |
atttaaaattacttataagaatttc |
10468121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 600
Target Start/End: Original strand, 10464207 - 10464320
Alignment:
| Q |
487 |
tcagccaacgcttgtgggtttgatcaattgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaa |
586 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||| |||||| |||||||| | |||||| ||||| ||||| |||||| |||||||| | ||| |
|
|
| T |
10464207 |
tcagccaaggcttgtggttttgatggattgtctttgtttttgttatgatttccaaaatacccattttgttatatggcaaatgaaggattttggggatcag |
10464306 |
T |
|
| Q |
587 |
gagtcttggattca |
600 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
10464307 |
gagtcttggattca |
10464320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 627
Target Start/End: Complemental strand, 8443558 - 8443446
Alignment:
| Q |
515 |
tgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacatta |
614 |
Q |
| |
|
|||||||| |||| | ||||||||||| |||| ||| |||| | ||| | |||| |||||||||||||| |||||||||||||| || |||| |||| |
|
|
| T |
8443558 |
tgtctttgtttttcttatgatttcaagagaactcattatgttatttggcagatgaaggattttggagttcacgagtcttggattcaattatttaaaatta |
8443459 |
T |
|
| Q |
615 |
gttatgagaattt |
627 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
8443458 |
gttatcagaattt |
8443446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 6392660 - 6392716
Alignment:
| Q |
388 |
tattactgttgagcaatatgtgattgtttcactagatctctcaactgagtcatacact |
445 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| | |||||| |||||| |||||||| |
|
|
| T |
6392660 |
tattactgttgagcaatatgtgattctttcactcg-tctctccactgagacatacact |
6392716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 6387934 - 6387978
Alignment:
| Q |
234 |
ataattcatggagaaacattcaatgcttccccgtgcttccacttt |
278 |
Q |
| |
|
||||||| |||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
6387934 |
ataattcttggagaaatattcaatgcttccccatgcttccacttt |
6387978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 10481827 - 10481915
Alignment:
| Q |
192 |
gtggtaatgcaacaagtgtggtgaaagtattcaacattgcggataattcatggagaaacattcaatgcttccccgtgcttccactttac |
280 |
Q |
| |
|
|||||||||||| ||| ||||||||||| |||| || |||||||| |||||||| |||||||| || || ||||||||||||||| |
|
|
| T |
10481827 |
gtggtaatgcaagaagcgtggtgaaagttttcagtatgagggataattgttggagaaatattcaatgttttcctgtgcttccactttac |
10481915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 625
Target Start/End: Original strand, 53774804 - 53774916
Alignment:
| Q |
513 |
attgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacat |
612 |
Q |
| |
|
||||| |||| |||| | ||||||| || | ||| ||| ||||| ||||| |||||| || ||||||||| |||||||||||| ||| || ||||| || |
|
|
| T |
53774804 |
attgtatttgtttttcttatgattttaaagaaactcattttgttatatggcaaatgaaggaatttggagttgaagagtcttggactcaattccttaaaat |
53774903 |
T |
|
| Q |
613 |
tagttatgagaat |
625 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
53774904 |
tagttatcagaat |
53774916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 558 - 635
Target Start/End: Original strand, 6392833 - 6392910
Alignment:
| Q |
558 |
tatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagttatgagaatttccattcaa |
635 |
Q |
| |
|
||||| |||||| |||||||||||||| |||||||||||||| || |||| |||||||| | ||||||| ||||| |
|
|
| T |
6392833 |
tatggcaaatgaaggattttggagttcacgagtcttggattcaattatttaaaattagttacaacaatttcctttcaa |
6392910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 10460183 - 10460244
Alignment:
| Q |
104 |
cctagtaattttaagttctcttttgggtatgatatttcaagtaaaacatataaggtggtagc |
165 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| ||| | | |||| |||||||||||||| |
|
|
| T |
10460183 |
cctagtaattttaagtttgcttttggttatgataattcgactgaaacttataaggtggtagc |
10460244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 600
Target Start/End: Original strand, 35766984 - 35767069
Alignment:
| Q |
515 |
tgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattca |
600 |
Q |
| |
|
||||||||||||| | |||||| | | |||| ||| ||||| ||||||| ||| ||| ||||||||| |||||||||||||||| |
|
|
| T |
35766984 |
tgtctttgcttttctaatgattatatgtgaactcattttgttatatggaagatggaagaatttggagttgaagagtcttggattca |
35767069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 544 - 600
Target Start/End: Original strand, 837771 - 837827
Alignment:
| Q |
544 |
aacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattca |
600 |
Q |
| |
|
||||||| ||||| ||||| |||||| ||||||| |||||||||||||||||||| |
|
|
| T |
837771 |
aacccattttgttatatggcaaatgaagaattttggtgttcaagagtcttggattca |
837827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 216; Significance: 1e-118; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 202 - 669
Target Start/End: Complemental strand, 25901696 - 25901229
Alignment:
| Q |
202 |
aacaagtgtggtgaaagtattcaacattgcggataattcatggagaaacattcaatgcttccccgtgcttccactttactggtttaagcatgaaaagaac |
301 |
Q |
| |
|
|||||||||||||||||| ||| ||| | |||| |||||||||||||||||||||| ||||| |||||||||||||| |||||| | ||||| |||||| |
|
|
| T |
25901696 |
aacaagtgtggtgaaagttctcagcatggaggatgattcatggagaaacattcaatgtttccctgtgcttccactttattggtttgatcatgataagaac |
25901597 |
T |
|
| Q |
302 |
aatggtgtgtatttgagtggtacaattaactggttgacccttcgcgattacttctattctgattatgaaattggtaatgttagtggtattactgttgagc |
401 |
Q |
| |
|
| ||||| || ||||||||||| |||||||||||| | |||| | ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||| |
|
|
| T |
25901596 |
caaggtgtttacttgagtggtactattaactggttggcacttcacaattacttctattcagattatgaatttgataatgttagtaagattactgttgagc |
25901497 |
T |
|
| Q |
402 |
aatatgtgattgtttcactagatctctcaactgagtcatacactgaatatttgctccctcggggttttgacgaggtgcctcgtgttcagccaacgcttgt |
501 |
Q |
| |
|
|||||||||||||||| || ||||| || ||||||||||||||| | | ||||| ||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
25901496 |
aatatgtgattgtttcgcttgatctgtccactgagtcatacactcagttgttgctacctcggggttttgacgaggtgccacgtgttcagccaacaattgt |
25901397 |
T |
|
| Q |
502 |
gggtttgatcaattgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcag |
601 |
Q |
| |
|
|| |||||| | | ||||| ||| |||||||||||||||||| |||| ||||| |||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
25901396 |
ggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaaggattttcgagttcaagagtcttggattcaa |
25901297 |
T |
|
| Q |
602 |
ttgcttaacattagttatgagaatttccattcaagcgaatatttattgaaatttgaaacgatggagtt |
669 |
Q |
| |
|
||| | || ||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
25901296 |
ttgttaaaaattagttatcagaatatttgttcaagccaatatttattgaaatttgaaacgatggagtt |
25901229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 202 - 671
Target Start/End: Complemental strand, 25915714 - 25915245
Alignment:
| Q |
202 |
aacaagtgtggtgaaagtattcaacattgcggataattcatggagaaacattcaatgcttccccgtgcttccactttactggtttaagcatgaaaagaac |
301 |
Q |
| |
|
|||||||||||||||||| ||| ||| | |||| |||||||||||||||||||||||||||| |||||||| ||||| |||||| | | ||| |||| | |
|
|
| T |
25915714 |
aacaagtgtggtgaaagttctcagcatgggggatgattcatggagaaacattcaatgcttccctgtgcttcccctttattggtttcatcgtgataagagc |
25915615 |
T |
|
| Q |
302 |
aatggtgtgtatttgagtggtacaattaactggttgacccttcgcgattacttctattctgattatgaaattggtaatgttagtggtattactgttgagc |
401 |
Q |
| |
|
| ||||| || ||||||||||| |||||||||||| | |||||| |||||||||||||||| |||||| ||| |||||||||| ||||||||||||| |
|
|
| T |
25915614 |
caaggtgtttacttgagtggtactattaactggttggcacttcgcaattacttctattctgactatgaatttgataatgttagtaagattactgttgagc |
25915515 |
T |
|
| Q |
402 |
aatatgtgattgtttcactagatctctcaactgagtcatacactgaatatttgctccctcggggttttgacgaggtgcctcgtgttcagccaacgcttgt |
501 |
Q |
| |
|
|||||||||||||||| || ||||| || ||||||||||||||| | | ||||| ||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
25915514 |
aatatgtgattgtttcgcttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaggtgccacgtgttcagccaacaattgt |
25915415 |
T |
|
| Q |
502 |
gggtttgatcaattgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcag |
601 |
Q |
| |
|
|| |||||| | | ||||| ||| |||||||||||||||||| |||| ||||| |||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
25915414 |
ggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaaggattttcgagttcaagagtcttggattcaa |
25915315 |
T |
|
| Q |
602 |
ttgcttaacattagttatgagaatttccattcaagcgaatatttattgaaatttgaaacgatggagttct |
671 |
Q |
| |
|
||| | || ||||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
25915314 |
ttgttaaaaattagttatcagaatttttgttcaagccaatctttattgaaatttgaaacgatggagttct |
25915245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 604
Target Start/End: Original strand, 3837903 - 3837964
Alignment:
| Q |
543 |
gaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttg |
604 |
Q |
| |
|
|||||||| ||||||| ||| |||||| ||| |||||||||||||||||||||| ||||||| |
|
|
| T |
3837903 |
gaacccattttgttttgtgggaaatgaaagagtttggagttcaagagtcttggactcagttg |
3837964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 25901775 - 25901718
Alignment:
| Q |
111 |
attttaagttctcttttgggtatgatatttcaagtaaaacatataaggtggtagcgtt |
168 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
25901775 |
attttaagttctcttttggttatgatattttgagtaaaacttataaggtactagcgtt |
25901718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 617
Target Start/End: Complemental strand, 12734874 - 12734792
Alignment:
| Q |
535 |
tttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagtt |
617 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| || || ||||||||||| ||||||||||| || || || ||||||| |
|
|
| T |
12734874 |
tttcaagggaacccattttgttttatggatgatgttggaattcggagttcaagattcttggattcaatttctcaaaattagtt |
12734792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 25915793 - 25915736
Alignment:
| Q |
111 |
attttaagttctcttttgggtatgatatttcaagtaaaacatataaggtggtagcgtt |
168 |
Q |
| |
|
||||||||||||||||||| ||||||| || |||||||| |||||||| ||||||| |
|
|
| T |
25915793 |
attttaagttctcttttggttatgatactttgagtaaaacttataaggtaatagcgtt |
25915736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 512 - 622
Target Start/End: Original strand, 554439 - 554549
Alignment:
| Q |
512 |
aattgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaaca |
611 |
Q |
| |
|
||||||||||| |||| ||| ||||| |||||||||||||| || ||||| |||||| ||| | ||||||| |||||||||||| ||| || ||||| | |
|
|
| T |
554439 |
aattgtctttgtttttctcacgattttgagggaacccatcttattatatggcaaatgatagaatatggagttaaagagtcttggactcaattacttaaaa |
554538 |
T |
|
| Q |
612 |
ttagttatgag |
622 |
Q |
| |
|
||||||||||| |
|
|
| T |
554539 |
ttagttatgag |
554549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 619
Target Start/End: Original strand, 25377040 - 25377144
Alignment:
| Q |
515 |
tgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacatta |
614 |
Q |
| |
|
|||||||| |||||||||||||| ||| || |||| ||||| |||||| |||| ||||||||||||||||||||||||||||| || |||| |||| |
|
|
| T |
25377040 |
tgtctttgtttttgtcatgatttggaggaaaaccattttgttatatggatgatgaaggattttggagttcaagagtcttggattcaattatttaaaatta |
25377139 |
T |
|
| Q |
615 |
gttat |
619 |
Q |
| |
|
||||| |
|
|
| T |
25377140 |
gttat |
25377144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 25376854 - 25376908
Alignment:
| Q |
299 |
aacaatggtgtgtatttgagtggtacaattaactggttgacccttcgcgattact |
353 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||| |||||||| |||||| |
|
|
| T |
25376854 |
aacaatggtgtgtatttgagtggtactattacctggttggcccttcgcaattact |
25376908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 619
Target Start/End: Original strand, 14514882 - 14514970
Alignment:
| Q |
531 |
atgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagttat |
619 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||| || ||||||||| |||| ||||||| ||| || ||||| ||||||||| |
|
|
| T |
14514882 |
atgatttcaagaaaacccatcttgttatatggaaaatggatgaatttggagttgaagattcttggactcaattccttaaaattagttat |
14514970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 609
Target Start/End: Original strand, 20980568 - 20980664
Alignment:
| Q |
513 |
attgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaa |
609 |
Q |
| |
|
|||||||||| ||||||||| ||| ||| |||| || ||||| |||||||||||||||| ||| ||||| |||||||||||| | |||| ||||| |
|
|
| T |
20980568 |
attgtctttgtttttgtcattattccaacggaaatgattttgttatatggaaaatgacagaatttagagttgaagagtcttggactaagttccttaa |
20980664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 535 - 617
Target Start/End: Complemental strand, 18913641 - 18913559
Alignment:
| Q |
535 |
tttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagtt |
617 |
Q |
| |
|
||||| |||||||||| ||||| ||||||| |||| || |||||||||||||||||||||| ||| || || || ||||||| |
|
|
| T |
18913641 |
tttcaggggaacccattttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt |
18913559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 596
Target Start/End: Complemental strand, 33637727 - 33637674
Alignment:
| Q |
543 |
gaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttgga |
596 |
Q |
| |
|
|||||||||||||||| || |||||| ||| |||||||||||||||||||||| |
|
|
| T |
33637727 |
gaacccatcttgttttgtgagaaatgagagagtttggagttcaagagtcttgga |
33637674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 617
Target Start/End: Complemental strand, 18908884 - 18908811
Alignment:
| Q |
544 |
aacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagtt |
617 |
Q |
| |
|
||||||| ||||| ||||||| |||| || |||||||||||||||||||||| ||| || || || ||||||| |
|
|
| T |
18908884 |
aacccattttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt |
18908811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 617
Target Start/End: Complemental strand, 18920840 - 18920767
Alignment:
| Q |
544 |
aacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagtt |
617 |
Q |
| |
|
||||||| ||||| ||||||| |||| || |||||||||||||||||||||| ||| || || || ||||||| |
|
|
| T |
18920840 |
aacccattttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt |
18920767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 25376921 - 25376970
Alignment:
| Q |
396 |
ttgagcaatatgtgattgtttcactagatctctcaactgagtcatacact |
445 |
Q |
| |
|
||||| |||||||||||||||| || |||||||| |||||| |||||||| |
|
|
| T |
25376921 |
ttgagaaatatgtgattgtttcgctcgatctctcgactgagacatacact |
25376970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 515 - 625
Target Start/End: Original strand, 27618457 - 27618567
Alignment:
| Q |
515 |
tgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacatta |
614 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||| ||| ||||| ||||||||||| ||| | |||||| |||||||||||| |||||||||||| ||| |
|
|
| T |
27618457 |
tgtctttgtttttgtcatgattttaagcaaactcattttgttatatggaaaatggaagaactcggagttgaagagtcttggactcagttgcttaaagtta |
27618556 |
T |
|
| Q |
615 |
gttatgagaat |
625 |
Q |
| |
|
||||| ||||| |
|
|
| T |
27618557 |
gttatcagaat |
27618567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 21258691 - 21258746
Alignment:
| Q |
299 |
aacaatggtgtgtatttgagtggtacaattaactggttgacccttcgcgattactt |
354 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||| || || ||||| |||| |
|
|
| T |
21258691 |
aacaatggtgtgtatttgagtggtactattaattggttggccgtttgcgatcactt |
21258746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 42846877 - 42846824
Alignment:
| Q |
299 |
aacaatggtgtgtatttgagtggtacaattaactggttgacccttcgcgattac |
352 |
Q |
| |
|
|||| |||||| |||||||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
42846877 |
aacactggtgtttatttgagtggtactattaactggttggtccttcgtgattac |
42846824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 22028616 - 22028696
Alignment:
| Q |
537 |
tcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagtt |
617 |
Q |
| |
|
|||||| ||||||| ||||| ||||||||||||| |||| ||||||| |||||||||||| ||| || ||||| ||||||| |
|
|
| T |
22028616 |
tcaaggaaacccattttgttatatggaaaatgacggattatggagttgaagagtcttggactcaattacttaagattagtt |
22028696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 619
Target Start/End: Complemental strand, 15572001 - 15571895
Alignment:
| Q |
513 |
attgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacat |
612 |
Q |
| |
|
|||||||||| |||| | |||||||||||||||||||| |||| | ||| |||||| || ||||||||| ||||||||||| |||| || | ||| || |
|
|
| T |
15572001 |
attgtctttgtttttcttatgatttcaagggaacccattttgtcatgtggcaaatgagggagtttggagttgaagagtcttgggttcaattccataaaat |
15571902 |
T |
|
| Q |
613 |
tagttat |
619 |
Q |
| |
|
||||||| |
|
|
| T |
15571901 |
tagttat |
15571895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 596
Target Start/End: Complemental strand, 16846565 - 16846487
Alignment:
| Q |
518 |
ctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttgga |
596 |
Q |
| |
|
||||| |||| ||||| | ||||| ||| ||||||||| ||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
16846565 |
ctttgtttttctcatgttgtcaagcaaactcatcttgttatatggaagatgacagattatggagttcaagagtcttgga |
16846487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 596
Target Start/End: Complemental strand, 16839452 - 16839404
Alignment:
| Q |
548 |
catcttgttttatggaaaatgacagattttggagttcaagagtcttgga |
596 |
Q |
| |
|
||||||||| ||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
16839452 |
catcttgttatatggaagatgacagattatggagttcaagagtcttgga |
16839404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 630
Target Start/End: Original strand, 22063610 - 22063723
Alignment:
| Q |
517 |
tctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagt |
616 |
Q |
| |
|
|||||| |||| |||||||||||| ||| ||| ||||| ||||| |||||| || |||||| ||||||||||||||| |||||| | || |||||| |
|
|
| T |
22063610 |
tctttgtttttttcatgatttcaaacaaactcattttgttatatggcaaatgaaggaatttggatttcaagagtcttggactcagttattcaaaattagt |
22063709 |
T |
|
| Q |
617 |
tatgagaatttcca |
630 |
Q |
| |
|
||| ||||| |||| |
|
|
| T |
22063710 |
tatcagaatatcca |
22063723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 630
Target Start/End: Original strand, 22070075 - 22070192
Alignment:
| Q |
513 |
attgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacat |
612 |
Q |
| |
|
|||||||||| |||| |||||||||||| |||| ||| || || ||||| |||||| | |||||||||||||||||||||| || ||| | || || |
|
|
| T |
22070075 |
attgtctttgtttttctcatgatttcaaacgaactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggactcggttattcaaaat |
22070174 |
T |
|
| Q |
613 |
tagttatgagaatttcca |
630 |
Q |
| |
|
||||||| ||||| |||| |
|
|
| T |
22070175 |
tagttataagaatctcca |
22070192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 554 - 614
Target Start/End: Original strand, 22039951 - 22040011
Alignment:
| Q |
554 |
gttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacatta |
614 |
Q |
| |
|
||||||||||| |||||||||| ||||||| |||||||||||| ||| || ||||| |||| |
|
|
| T |
22039951 |
gttttatggaagatgacagattatggagttgaagagtcttggactcaattacttaagatta |
22040011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 600
Target Start/End: Original strand, 36260217 - 36260304
Alignment:
| Q |
513 |
attgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattca |
600 |
Q |
| |
|
||||||||||||||| | |||||| |||| ||| || ||||| ||||||| ||| ||| ||||||||| |||||||||||||||| |
|
|
| T |
36260217 |
attgtctttgcttttctaatgattacaagaaaactgattttgttatatggaagatggaagaatttggagttgaagagtcttggattca |
36260304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 534 - 596
Target Start/End: Original strand, 19357895 - 19357957
Alignment:
| Q |
534 |
atttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttgga |
596 |
Q |
| |
|
||||||| || |||||| | ||||||||||| |||| || |||||||||||||||||||||| |
|
|
| T |
19357895 |
atttcaaagggacccatttcgttttatggaagatgatggaatttggagttcaagagtcttgga |
19357957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 619
Target Start/End: Complemental strand, 19637318 - 19637217
Alignment:
| Q |
518 |
ctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagtt |
617 |
Q |
| |
|
|||||||| | ||||||||| || ||||| || || || ||||| |||||| || ||||||||||||||||| ||||||| | | ||||| ||||||| |
|
|
| T |
19637318 |
ctttgcttgtctcatgattttaatggaactgattttattatatggcaaatgaaggaatttggagttcaagagtcgtggattcggctccttaaaattagtt |
19637219 |
T |
|
| Q |
618 |
at |
619 |
Q |
| |
|
|| |
|
|
| T |
19637218 |
at |
19637217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 558 - 615
Target Start/End: Complemental strand, 20133378 - 20133321
Alignment:
| Q |
558 |
tatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattag |
615 |
Q |
| |
|
||||| |||||| ||| ||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
20133378 |
tatggcaaatgaaagaatttggagttgaagattcttggattcagttatttaacattag |
20133321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 596
Target Start/End: Complemental strand, 20476046 - 20475993
Alignment:
| Q |
543 |
gaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttgga |
596 |
Q |
| |
|
|||||||| ||||||| ||| |||||| ||| ||||| |||||||||||||||| |
|
|
| T |
20476046 |
gaacccattttgttttgtgggaaatgagagagtttggggttcaagagtcttgga |
20475993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 630
Target Start/End: Original strand, 22080832 - 22080949
Alignment:
| Q |
513 |
attgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacat |
612 |
Q |
| |
|
|||||||||| |||| |||||||||||| ||| ||| || || ||||| |||||| | |||||||||||||||||||||| || ||| | || || |
|
|
| T |
22080832 |
attgtctttgtttttctcatgatttcaaacaaactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggactcggttattcaaaat |
22080931 |
T |
|
| Q |
613 |
tagttatgagaatttcca |
630 |
Q |
| |
|
||||||| ||||| |||| |
|
|
| T |
22080932 |
tagttatcagaatctcca |
22080949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 630
Target Start/End: Original strand, 22100461 - 22100574
Alignment:
| Q |
517 |
tctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagt |
616 |
Q |
| |
|
|||||| |||| |||||||||||| ||| ||| || || ||||| |||||| | |||||||||||||||||||||| |||||| | || |||||| |
|
|
| T |
22100461 |
tctttgtttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagt |
22100560 |
T |
|
| Q |
617 |
tatgagaatttcca |
630 |
Q |
| |
|
||| ||||| |||| |
|
|
| T |
22100561 |
tatcagaatatcca |
22100574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 619
Target Start/End: Complemental strand, 50645575 - 50645485
Alignment:
| Q |
529 |
tcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagttat |
619 |
Q |
| |
|
||||||||| ||||||| ||| ||||| | ||| |||||| ||||||||||||||||||||||||||||| || |||| ||||||||| |
|
|
| T |
50645575 |
tcatgattttgagggaactcattttgttatgtggcaaatgaaggattttggagttcaagagtcttggattcaattatttaaaattagttat |
50645485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0267 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0267
Description:
Target: scaffold0267; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 604
Target Start/End: Original strand, 13384 - 13445
Alignment:
| Q |
543 |
gaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttg |
604 |
Q |
| |
|
|||||||| ||||||| ||| |||||| ||| |||||||||||||||||||||| ||||||| |
|
|
| T |
13384 |
gaacccattttgttttgtgggaaatgaaagagtttggagttcaagagtcttggactcagttg |
13445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0464 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0464
Description:
Target: scaffold0464; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 535 - 617
Target Start/End: Original strand, 8047 - 8129
Alignment:
| Q |
535 |
tttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagtt |
617 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||| || || ||||||||||| ||||||||||| || || || ||||||| |
|
|
| T |
8047 |
tttcaagggaacccattttgttttatggatgatgatggaattcggagttcaagattcttggattcaatttctcaaaattagtt |
8129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 603
Target Start/End: Original strand, 5978991 - 5979081
Alignment:
| Q |
513 |
attgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagtt |
603 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||| | ||||| ||||| |||| || |||||||| ||||||||||||| |||||| |
|
|
| T |
5978991 |
attgtctttgcttttcgcatgatttcaagagaaccgaatttgttatatggctgatgaaggagtttggagtccaagagtcttggactcagtt |
5979081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 513 - 625
Target Start/End: Complemental strand, 6947986 - 6947874
Alignment:
| Q |
513 |
attgtctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacat |
612 |
Q |
| |
|
|||| ||||| |||| |||||||||||| |||||| ||||| | ||| |||||| || ||||||||| |||| ||||||| ||| || ||||| || |
|
|
| T |
6947986 |
attgcctttgtttttcacatgatttcaagaaaacccactttgttctttggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaat |
6947887 |
T |
|
| Q |
613 |
tagttatgagaat |
625 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
6947886 |
tagttatgtgaat |
6947874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0867 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0867
Description:
Target: scaffold0867; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 630
Target Start/End: Complemental strand, 4771 - 4658
Alignment:
| Q |
517 |
tctttgcttttgtcatgatttcaagggaacccatcttgttttatggaaaatgacagattttggagttcaagagtcttggattcagttgcttaacattagt |
616 |
Q |
| |
|
|||||| |||| |||||||||||| ||| ||| || || ||||| |||||| | |||||||||||||||||||||| |||||| | || |||||| |
|
|
| T |
4771 |
tctttgtttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagt |
4672 |
T |
|
| Q |
617 |
tatgagaatttcca |
630 |
Q |
| |
|
||| ||||| |||| |
|
|
| T |
4671 |
tatcagaatatcca |
4658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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