View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11566_low_6 (Length: 440)

Name: NF11566_low_6
Description: NF11566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11566_low_6
NF11566_low_6
[»] chr8 (42 HSPs)
chr8 (7-382)||(33014258-33014632)
chr8 (388-440)||(22014180-22014232)
chr8 (388-440)||(184309-184361)
chr8 (388-440)||(36677646-36677698)
chr8 (392-438)||(7344646-7344692)
chr8 (387-437)||(32375584-32375634)
chr8 (393-438)||(17924040-17924085)
chr8 (387-440)||(26663120-26663173)
chr8 (388-440)||(21720-21772)
chr8 (388-440)||(23018619-23018671)
chr8 (387-438)||(17924372-17924423)
chr8 (388-434)||(2335240-2335286)
chr8 (388-437)||(42481460-42481509)
chr8 (387-438)||(8419337-8419388)
chr8 (388-438)||(489715-489765)
chr8 (392-438)||(30301160-30301205)
chr8 (388-437)||(42485628-42485677)
chr8 (388-440)||(1056288-1056340)
chr8 (386-434)||(15030816-15030864)
chr8 (386-437)||(25624-25675)
chr8 (387-434)||(45066454-45066501)
chr8 (386-440)||(1052490-1052544)
chr8 (388-438)||(22519684-22519734)
chr8 (388-434)||(27501535-27501581)
chr8 (388-434)||(28617503-28617549)
chr8 (388-433)||(184646-184691)
chr8 (391-440)||(26659391-26659440)
chr8 (388-433)||(36678023-36678068)
chr8 (387-438)||(2416136-2416187)
chr8 (387-438)||(2878517-2878568)
chr8 (386-433)||(28618529-28618576)
chr8 (392-438)||(483721-483767)
chr8 (388-434)||(915727-915773)
chr8 (389-439)||(15036790-15036840)
chr8 (392-438)||(22510486-22510532)
chr8 (388-434)||(31185537-31185583)
chr8 (388-434)||(32585082-32585128)
chr8 (388-434)||(43363352-43363398)
chr8 (387-440)||(1114676-1114729)
chr8 (388-440)||(23022374-23022426)
chr8 (386-434)||(32583985-32584033)
chr8 (386-434)||(44841966-44842014)
[»] chr4 (44 HSPs)
chr4 (386-440)||(30723053-30723107)
chr4 (388-440)||(49169184-49169236)
chr4 (387-438)||(39773630-39773681)
chr4 (387-440)||(54633745-54633798)
chr4 (388-440)||(31425405-31425457)
chr4 (388-440)||(37562999-37563051)
chr4 (388-438)||(55799649-55799699)
chr4 (387-440)||(40358367-40358420)
chr4 (386-438)||(41793263-41793315)
chr4 (388-434)||(21022980-21023026)
chr4 (388-438)||(49090381-49090431)
chr4 (388-438)||(49096440-49096490)
chr4 (388-440)||(1089671-1089723)
chr4 (386-434)||(26932516-26932564)
chr4 (387-439)||(30726829-30726881)
chr4 (387-438)||(6175780-6175831)
chr4 (387-438)||(13182187-13182238)
chr4 (403-438)||(49563789-49563824)
chr4 (386-433)||(55588377-55588424)
chr4 (388-438)||(6181880-6181930)
chr4 (388-438)||(13173168-13173218)
chr4 (388-434)||(14201619-14201665)
chr4 (388-434)||(26792337-26792383)
chr4 (388-434)||(40832581-40832627)
chr4 (387-437)||(41801027-41801077)
chr4 (388-434)||(51037560-51037606)
chr4 (388-433)||(52529147-52529192)
chr4 (388-433)||(54634109-54634154)
chr4 (388-440)||(1087794-1087846)
chr4 (392-440)||(9893351-9893399)
chr4 (388-440)||(31421640-31421692)
chr4 (388-440)||(40352300-40352352)
chr4 (388-419)||(15995656-15995687)
chr4 (386-433)||(37563374-37563421)
chr4 (387-433)||(7485754-7485800)
chr4 (388-434)||(23220613-23220659)
chr4 (388-434)||(46253421-46253467)
chr4 (387-433)||(55587292-55587338)
chr4 (389-438)||(1309203-1309252)
chr4 (388-433)||(7484665-7484710)
chr4 (388-433)||(23221760-23221805)
chr4 (388-433)||(38368166-38368211)
chr4 (388-440)||(9889928-9889980)
chr4 (386-434)||(29307554-29307602)
[»] chr2 (44 HSPs)
chr2 (387-440)||(5355618-5355671)
chr2 (387-440)||(7267531-7267584)
chr2 (387-440)||(30493292-30493345)
chr2 (387-438)||(5351821-5351872)
chr2 (386-437)||(15835301-15835352)
chr2 (387-438)||(43536035-43536086)
chr2 (392-438)||(208948-208994)
chr2 (388-437)||(44100888-44100937)
chr2 (392-438)||(18000170-18000216)
chr2 (392-438)||(41564581-41564627)
chr2 (388-438)||(42499687-42499737)
chr2 (397-438)||(10619942-10619983)
chr2 (387-438)||(17426487-17426538)
chr2 (387-438)||(42505851-42505902)
chr2 (392-438)||(3935768-3935814)
chr2 (388-434)||(10424774-10424820)
chr2 (388-438)||(17420502-17420552)
chr2 (387-437)||(39800742-39800792)
chr2 (388-434)||(43619235-43619281)
chr2 (387-440)||(38950613-38950666)
chr2 (388-437)||(39793897-39793946)
chr2 (388-440)||(15831061-15831113)
chr2 (391-434)||(22003494-22003537)
chr2 (388-439)||(28468575-28468626)
chr2 (387-438)||(30497038-30497089)
chr2 (388-434)||(20937832-20937878)
chr2 (388-434)||(39951242-39951288)
chr2 (392-438)||(43978474-43978520)
chr2 (392-438)||(43984423-43984469)
chr2 (387-440)||(24749619-24749672)
chr2 (388-433)||(38945696-38945741)
chr2 (388-432)||(26543238-26543282)
chr2 (386-434)||(29074095-29074143)
chr2 (387-434)||(3085970-3086017)
chr2 (391-434)||(30803110-30803153)
chr2 (392-438)||(3940818-3940864)
chr2 (388-434)||(21998148-21998194)
chr2 (388-434)||(39033033-39033079)
chr2 (386-419)||(3803651-3803684)
chr2 (387-440)||(27276461-27276514)
chr2 (386-434)||(39490055-39490103)
chr2 (388-432)||(39947534-39947578)
chr2 (385-429)||(43312663-43312707)
chr2 (386-434)||(43313451-43313499)
[»] chr3 (48 HSPs)
chr3 (388-440)||(35743667-35743719)
chr3 (385-438)||(41844080-41844133)
chr3 (388-440)||(2858043-2858095)
chr3 (388-440)||(46697645-46697697)
chr3 (387-438)||(6745415-6745466)
chr3 (392-438)||(3953304-3953350)
chr3 (392-438)||(8156446-8156492)
chr3 (392-438)||(30943127-30943173)
chr3 (387-440)||(3501982-3502035)
chr3 (387-440)||(25191854-25191907)
chr3 (388-440)||(9426565-9426617)
chr3 (387-438)||(34051435-34051486)
chr3 (388-438)||(42900111-42900161)
chr3 (386-438)||(54392117-54392169)
chr3 (387-438)||(46388891-46388942)
chr3 (388-438)||(2968014-2968064)
chr3 (388-438)||(34045342-34045392)
chr3 (388-438)||(46406713-46406763)
chr3 (388-438)||(49138515-49138565)
chr3 (385-440)||(1835414-1835466)
chr3 (387-440)||(42904269-42904322)
chr3 (388-440)||(29008820-29008872)
chr3 (388-440)||(50477114-50477166)
chr3 (387-434)||(19988393-19988440)
chr3 (388-438)||(2950267-2950317)
chr3 (388-438)||(16444542-16444592)
chr3 (388-438)||(46702114-46702164)
chr3 (388-438)||(49144545-49144595)
chr3 (388-433)||(1835084-1835129)
chr3 (387-432)||(4008417-4008462)
chr3 (388-433)||(12898780-12898825)
chr3 (386-434)||(4002673-4002721)
chr3 (386-434)||(12897757-12897805)
chr3 (386-434)||(34543228-34543276)
chr3 (388-440)||(50481470-50481522)
chr3 (387-419)||(50957774-50957806)
chr3 (387-438)||(54386066-54386117)
chr3 (388-434)||(3493523-3493569)
chr3 (388-434)||(3497217-3497263)
chr3 (388-434)||(11249616-11249662)
chr3 (388-434)||(27739659-27739705)
chr3 (388-434)||(28817093-28817139)
chr3 (388-434)||(50998772-50998818)
chr3 (387-432)||(3975665-3975710)
chr3 (388-433)||(16851061-16851106)
chr3 (386-434)||(2266963-2267011)
chr3 (387-419)||(2743331-2743363)
chr3 (387-419)||(9429957-9429989)
[»] chr1 (33 HSPs)
chr1 (388-440)||(8548756-8548808)
chr1 (388-438)||(19928934-19928984)
chr1 (387-440)||(3728668-3728721)
chr1 (392-438)||(20354024-20354070)
chr1 (392-438)||(20556836-20556882)
chr1 (392-438)||(38771567-38771613)
chr1 (392-437)||(3993933-3993978)
chr1 (392-438)||(3943912-3943958)
chr1 (388-434)||(19914401-19914447)
chr1 (388-440)||(15051435-15051487)
chr1 (388-438)||(3732442-3732492)
chr1 (388-438)||(19924689-19924739)
chr1 (402-440)||(29622511-29622549)
chr1 (387-434)||(586697-586744)
chr1 (388-438)||(13629338-13629388)
chr1 (392-426)||(29622545-29622579)
chr1 (388-438)||(30889995-30890045)
chr1 (388-434)||(38633246-38633292)
chr1 (388-440)||(8473717-8473769)
chr1 (388-440)||(26879382-26879434)
chr1 (388-440)||(30905705-30905757)
chr1 (387-434)||(4883167-4883214)
chr1 (388-419)||(30910111-30910142)
chr1 (388-434)||(2365169-2365215)
chr1 (388-434)||(30195476-30195522)
chr1 (388-434)||(43011762-43011808)
chr1 (388-434)||(43012737-43012783)
chr1 (388-434)||(47652662-47652708)
chr1 (388-433)||(585589-585634)
chr1 (387-440)||(44621204-44621257)
chr1 (388-440)||(5077875-5077927)
chr1 (388-440)||(6562248-6562300)
chr1 (387-419)||(29356779-29356811)
[»] chr7 (39 HSPs)
chr7 (387-438)||(603712-603763)
chr7 (387-440)||(10097849-10097902)
chr7 (388-434)||(7004-7050)
chr7 (392-438)||(30791097-30791143)
chr7 (386-440)||(41884213-41884267)
chr7 (392-438)||(43619643-43619689)
chr7 (388-440)||(35606723-35606775)
chr7 (387-434)||(16636335-16636382)
chr7 (387-434)||(17459256-17459303)
chr7 (387-434)||(17593911-17593958)
chr7 (387-438)||(48407410-48407461)
chr7 (388-434)||(8139-8185)
chr7 (387-438)||(20566448-20566499)
chr7 (387-438)||(45767950-45768000)
chr7 (388-438)||(10098267-10098317)
chr7 (388-440)||(15074315-15074367)
chr7 (388-440)||(35610502-35610554)
chr7 (386-434)||(42582048-42582096)
chr7 (386-434)||(46907472-46907520)
chr7 (383-438)||(9365575-9365630)
chr7 (387-434)||(12210682-12210729)
chr7 (388-439)||(42508115-42508166)
chr7 (387-434)||(46908565-46908612)
chr7 (388-434)||(27656973-27657019)
chr7 (388-433)||(10098211-10098256)
chr7 (386-434)||(13921356-13921404)
chr7 (388-440)||(17465800-17465852)
chr7 (388-440)||(17587362-17587414)
chr7 (388-440)||(41880448-41880500)
chr7 (387-434)||(10524449-10524496)
chr7 (387-438)||(48403305-48403356)
chr7 (387-434)||(49141710-49141757)
chr7 (386-432)||(7975704-7975750)
chr7 (388-434)||(18109867-18109913)
chr7 (388-438)||(20564007-20564057)
chr7 (392-434)||(40141319-40141361)
chr7 (388-434)||(42795172-42795218)
chr7 (388-433)||(618819-618864)
chr7 (387-439)||(18105306-18105358)
[»] chr5 (16 HSPs)
chr5 (388-438)||(37814516-37814566)
chr5 (387-440)||(28238072-28238125)
chr5 (391-440)||(28876580-28876629)
chr5 (392-438)||(14280989-14281035)
chr5 (388-438)||(19035139-19035189)
chr5 (388-438)||(19041206-19041256)
chr5 (388-434)||(27659874-27659920)
chr5 (386-438)||(11027027-11027079)
chr5 (386-438)||(11033551-11033603)
chr5 (388-438)||(38860257-38860307)
chr5 (388-437)||(28241889-28241938)
chr5 (386-434)||(8580572-8580620)
chr5 (388-432)||(13837658-13837702)
chr5 (388-419)||(13563602-13563633)
chr5 (388-434)||(3891418-3891464)
chr5 (388-440)||(27867907-27867959)
[»] chr6 (15 HSPs)
chr6 (388-437)||(30825984-30826033)
chr6 (387-438)||(27641840-27641891)
chr6 (388-438)||(18351732-18351782)
chr6 (392-438)||(1608256-1608302)
chr6 (388-438)||(11694149-11694199)
chr6 (385-437)||(26712313-26712365)
chr6 (388-434)||(6760964-6761010)
chr6 (388-438)||(27616649-27616699)
chr6 (385-438)||(6207182-6207235)
chr6 (386-434)||(13382561-13382609)
chr6 (388-434)||(2109452-2109498)
chr6 (392-440)||(30829738-30829786)
chr6 (387-438)||(11688047-11688098)
chr6 (388-434)||(13164349-13164395)
chr6 (389-434)||(8707917-8707962)
[»] scaffold0014 (1 HSPs)
scaffold0014 (388-438)||(84481-84531)
[»] scaffold1606 (1 HSPs)
scaffold1606 (388-438)||(50-100)
[»] scaffold0101 (1 HSPs)
scaffold0101 (388-438)||(41145-41195)
[»] scaffold0494 (2 HSPs)
scaffold0494 (386-440)||(763-817)
scaffold0494 (388-434)||(11546-11592)
[»] scaffold0094 (1 HSPs)
scaffold0094 (386-439)||(245-298)
[»] scaffold0016 (2 HSPs)
scaffold0016 (386-434)||(69313-69361)
scaffold0016 (388-434)||(68349-68395)
[»] scaffold0634 (1 HSPs)
scaffold0634 (386-432)||(7350-7396)
[»] scaffold0744 (1 HSPs)
scaffold0744 (388-440)||(509-561)
[»] scaffold0341 (1 HSPs)
scaffold0341 (388-440)||(17438-17490)
[»] scaffold0293 (1 HSPs)
scaffold0293 (391-439)||(810-858)
[»] scaffold0116 (1 HSPs)
scaffold0116 (388-440)||(11235-11287)


Alignment Details
Target: chr8 (Bit Score: 348; Significance: 0; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 7 - 382
Target Start/End: Complemental strand, 33014632 - 33014258
Alignment:
Q  7 gagaggacggtggagagagggctggtggtggggttgaggcggtggttgtcgaggagagtaacgagagaggtggcggcgggccagagctggaaggagaggc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33014632 gagaggacggtggagagagggctggtggtggggttgaggcggtggttgtcgaggagagtaacgagagaggtggcggcgggccagagctggaaggagaggc 33014533  T
Q  107 cttgagatgggagtgagcgaatggtgaccgttgattggatcgaatggaggaaatgggtttgaagtagttcttggttaggtagtagattgggttgtacggt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33014532 cttgagatgggagtgagcgaatggtgaccgttgattggatcgaatggaggaaatgggtttgaagtagttcttggttaggtagtaaattgggttgtacggt 33014433  T
Q  207 agggaatgggtttgtttcttcgtcggagtcagacatcattttgacgagtattgactttttgttgttgtgatagcagccagccgtcgaggatggttgaggt 306  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  33014432 ggggaatgggtttgtttcttcgtcggagtcagacatcattttgacgagtattgactttgtgttgttgtgatagcag-cagccgtcgaggatggttgaggt 33014334  T
Q  307 tgggactctcggttttatactttatactcatatttctaaagtggttttacttttctgtcccttctctttgaatatg 382  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33014333 tgggaatcccggttttatactttatactcatatttctaaagtggttttacttttctgtcccttctctttgaatatg 33014258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 22014180 - 22014232
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22014180 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 22014232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 184309 - 184361
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  184309 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacga 184361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 36677646 - 36677698
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36677646 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacga 36677698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 7344692 - 7344646
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7344692 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 7344646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 32375584 - 32375634
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32375584 agagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 32375634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 393 - 438
Target Start/End: Original strand, 17924040 - 17924085
Alignment:
Q  393 ttgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17924040 ttgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 17924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 26663173 - 26663120
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  26663173 agagaattgctattcccacattttgtttggctgtgccacacgagtaaaatacga 26663120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 21720 - 21772
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  21720 gagaattgttgttcccacatcttgtttggctgtgccacacgagtaaaatacga 21772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 23018619 - 23018671
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  23018619 gagaattgctgtttccacatcttgtttggctgtgccacacgagtaaaatacga 23018671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 17924423 - 17924372
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  17924423 agagtattgttgttcccacatgttgtttggctgtgccacacgagtaaaatac 17924372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 2335286 - 2335240
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  2335286 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 2335240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 42481460 - 42481509
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  42481460 gagaattgctgttctcacgtgttgtttggctgtgccacacgagtaaaata 42481509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 8419337 - 8419388
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  8419337 agaggattgctgatccaacatgttgtttggctgtgccacacgagtaaaatac 8419388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 489765 - 489715
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  489765 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 489715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 30301160 - 30301205
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  30301160 attgctgttcccacatgttgttt-gctgtgccacacgagtaaaatac 30301205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 42485677 - 42485628
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  42485677 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 42485628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 1056340 - 1056288
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| ||||||| ||||| ||||||||||||||||||    
T  1056340 gagaattgttgttcccacatcttgtttgactgtgtcacacgagtaaaatacga 1056288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 15030816 - 15030864
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  15030816 tagagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 15030864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 25675 - 25624
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    |||||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  25675 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 25624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 45066501 - 45066454
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  45066501 agagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 45066454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 1052490 - 1052544
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||||| | || ||| |||||||||| ||||||||||||    
T  1052490 tagagaattgctgttcccacatatagtatggatgtgccacaccagtaaaatacga 1052544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 22519734 - 22519684
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||| |||||||||||| | |||||| |||||||||||||||||||||    
T  22519734 gagaattactgttcccacatatagtttggttgtgccacacgagtaaaatac 22519684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 27501535 - 27501581
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||    
T  27501535 gagaattgctgttcccacttttggtttggctgtgccacacgagtaaa 27501581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 28617503 - 28617549
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||    
T  28617503 gagaattgctgttcccacttttggtttggctgtgccacacgagtaaa 28617549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 184691 - 184646
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||| | || ||||||||||||||||||||    
T  184691 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 184646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 26659391 - 26659440
Alignment:
Q  391 aattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||| | || |||||||||||||| ||||||||||||    
T  26659391 aattgctgttcccacatatagtatggctgtgccacaccagtaaaatacga 26659440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 36678068 - 36678023
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||| | || ||||||||||||||||||||    
T  36678068 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 36678023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 2416136 - 2416187
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||| ||||||||||| | || |||||||||||||| ||||||||||    
T  2416136 agagaattgttgttcccacatatagtatggctgtgccacacaagtaaaatac 2416187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 2878517 - 2878568
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||| ||||||  | ||||||||||||||| ||||||||||||||||    
T  2878517 agagaattgttgttcctgcgtgttgtttggctgtgtcacacgagtaaaatac 2878568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 433
Target Start/End: Complemental strand, 28618576 - 28618529
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||||| | |||||||| |||||||| |||||    
T  28618576 tagagaattgctgttcccacatttggtttggctatgccacacaagtaa 28618529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 483721 - 483767
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| ||||||||||| | |||||| |||||||||||||||||||||    
T  483721 attgttgttcccacatatagtttggttgtgccacacgagtaaaatac 483767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 915773 - 915727
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||| | | ||||||||||||||||||||||||    
T  915773 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 915727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 439
Target Start/End: Complemental strand, 15036840 - 15036790
Alignment:
Q  389 agaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacg 439  Q
    ||||||| ||||||||||  | |||||||||||||||||||||||| ||||    
T  15036840 agaattgttgttcccacacatagtttggctgtgccacacgagtaaattacg 15036790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 22510486 - 22510532
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||| ||||| | || |||||||||||||||||||||||||    
T  22510486 attgctgttctcacatatagtatggctgtgccacacgagtaaaatac 22510532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 31185583 - 31185537
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||| | | ||||||||||||||||||||||||    
T  31185583 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 31185537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 32585128 - 32585082
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||| | |||||||| |||||||||||||||    
T  32585128 gagaattgctattcccacatttggtttggctatgccacacgagtaaa 32585082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 43363398 - 43363352
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||| | | ||||||||||||||||||||||||    
T  43363398 gagaattgatgttcccacttttggtttggctgtgccacacgagtaaa 43363352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 1114676 - 1114729
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||| |||||||||||||  |  ||||||||||||| ||||||||||||    
T  1114676 agagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacga 1114729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 23022426 - 23022374
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || |||||||||||||  ||||||||||||    
T  23022426 gagaattgttgttcccacatatagtatggctgtgccacatcagtaaaatacga 23022374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 32583985 - 32584033
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | |  ||| |||||||||||||||||||    
T  32583985 tagagaattgctgttcccacttttactttagctgtgccacacgagtaaa 32584033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 44842014 - 44841966
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||| | | ||||||||||||||||| ||||||    
T  44842014 tagagaattgttgttcccacttttggtttggctgtgccacacaagtaaa 44841966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 30723053 - 30723107
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30723053 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 30723107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 49169236 - 49169184
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49169236 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 49169184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 39773681 - 39773630
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39773681 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 39773630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 54633745 - 54633798
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54633745 agagaattgctgttcccacatgttgtttgactgtgccacacgagtaaaatacga 54633798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 31425457 - 31425405
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31425457 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacga 31425405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 37562999 - 37563051
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37562999 gagaattgctgttcccacatgttgtttggctgtgtcacacgagtaaaatacga 37563051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 55799699 - 55799649
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  55799699 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatac 55799649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 40358420 - 40358367
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40358420 agagtattgctattcccacatgttgtttggctgtgccacacgagtaaaatacga 40358367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 41793263 - 41793315
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  41793263 tagagaattgctgttcccacatatagtttggctgtgccatacgagtaaaatac 41793315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 21023026 - 21022980
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  21023026 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 21022980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 49090381 - 49090431
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  49090381 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 49090431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 49096490 - 49096440
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  49096490 gagaattgctgttcccacatatagtttggttgtgccacacgagtaaaatac 49096440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 1089723 - 1089671
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||||||||    
T  1089723 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacga 1089671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 26932516 - 26932564
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  26932516 tagagaattgctgttcccacatatagtttggctgtgtcacacgagtaaa 26932564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 30726881 - 30726829
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacg 439  Q
    ||||||||||||||||||||| | || ||| ||||||||||||||||||||||    
T  30726881 agagaattgctgttcccacatatagtatggatgtgccacacgagtaaaatacg 30726829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 6175780 - 6175831
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| |||| ||||||||||| | ||||||||||||||||||||||||||||    
T  6175780 agagtattgttgttcccacatatagtttggctgtgccacacgagtaaaatac 6175831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 13182238 - 13182187
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||| ||||||||||| | || |||||||||||||||||||||||||    
T  13182238 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatac 13182187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 403 - 438
Target Start/End: Original strand, 49563789 - 49563824
Alignment:
Q  403 cacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||||||||||||||||||    
T  49563789 cacatgttgtttggctgtgccacacgagtaaaatac 49563824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 433
Target Start/End: Complemental strand, 55588424 - 55588377
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||    
T  55588424 tagagaattgctgttcccacatttggtttggctatgccacacgagtaa 55588377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 6181930 - 6181880
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||||||    
T  6181930 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatac 6181880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 13173168 - 13173218
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||||||    
T  13173168 gagaattgatgttcccacatatagtatggctgtgccacacgagtaaaatac 13173218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 14201665 - 14201619
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | |||||||| |||||||||||||||    
T  14201665 gagaattgctgttcccacatttggtttggctatgccacacgagtaaa 14201619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 26792383 - 26792337
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||    
T  26792383 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 26792337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 40832581 - 40832627
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | |||||||| |||||||||||||||    
T  40832581 gagaattgctgttcccacatttggtttggctatgccacacgagtaaa 40832627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 41801077 - 41801027
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    ||||||||||||||||||||| | || |||||||| |||||||||||||||    
T  41801077 agagaattgctgttcccacatatagtatggctgtgtcacacgagtaaaata 41801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 51037606 - 51037560
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||    
T  51037606 gagaattgttgttcccacatttagtttggctgtgccacacgagtaaa 51037560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 52529147 - 52529192
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||| | || ||||||||||||||||||||    
T  52529147 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 52529192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 54634154 - 54634109
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||| | || ||||||||||||||||||||    
T  54634154 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 54634109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 1087794 - 1087846
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||| | || |||||||||||||  ||||||||||||    
T  1087794 gagaattgctgttcccacatatagtatggctgtgccacatcagtaaaatacga 1087846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 9893399 - 9893351
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||| | || |||||||||||||| ||||||||||||    
T  9893399 attgctgttcccacatatagtatggctgtgccacacaagtaaaatacga 9893351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 31421640 - 31421692
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||| ||||| | || |||||||||||||| ||||||||||||    
T  31421640 gagaattgctgttctcacatatagtatggctgtgccacaccagtaaaatacga 31421692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 40352300 - 40352352
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || ||| |||||||||||||||||||||||    
T  40352300 gagaattgttgttcccacatatagtatggttgtgccacacgagtaaaatacga 40352352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 419
Target Start/End: Original strand, 15995656 - 15995687
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctg 419  Q
    ||||||||||||||||||||||||||||||||    
T  15995656 gagaattgctgttcccacatgttgtttggctg 15995687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 433
Target Start/End: Complemental strand, 37563421 - 37563374
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||||| | ||  |||||||||||||||||||    
T  37563421 tagagaattgctgttcccacatatggtaaggctgtgccacacgagtaa 37563374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 433
Target Start/End: Complemental strand, 7485800 - 7485754
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    ||||||||| ||||||||||| | |||||||| ||||||||||||||    
T  7485800 agagaattgttgttcccacatttggtttggctatgccacacgagtaa 7485754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 23220613 - 23220659
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||| | | ||||||||||||||||||||||||    
T  23220613 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 23220659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 46253421 - 46253467
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||| |||||||||||| | |||||| |||||||||||||||||    
T  46253421 gagaattactgttcccacatatagtttggttgtgccacacgagtaaa 46253467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 433
Target Start/End: Original strand, 55587292 - 55587338
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    ||||||||| ||||||||||| | |||||||| ||||||||||||||    
T  55587292 agagaattgttgttcccacatttggtttggctatgccacacgagtaa 55587338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 438
Target Start/End: Complemental strand, 1309252 - 1309203
Alignment:
Q  389 agaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||| |||||||| | || ||| |||||||||||||||||||||    
T  1309252 agaattgctgctcccacatatagtatggttgtgccacacgagtaaaatac 1309203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 7484665 - 7484710
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||| ||||||||||| | |||||||| ||||||||||||||    
T  7484665 gagaattgatgttcccacatttggtttggctatgccacacgagtaa 7484710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 23221805 - 23221760
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||| ||||||||||| | |||||||| ||||||||||||||    
T  23221805 gagaattgttgttcccacatttggtttggctatgccacacgagtaa 23221760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 38368166 - 38368211
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||| ||||||||||| | |||||||| ||||||||||||||    
T  38368166 gagaattgttgttcccacatttagtttggctatgccacacgagtaa 38368211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 9889928 - 9889980
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| |||||||||||||  |  ||||||||||||| ||||||||||||    
T  9889928 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacga 9889980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 29307602 - 29307554
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||| ||||| | |||||| |||||||||||||||||    
T  29307602 tagagaattgttgttctcacatttggtttggttgtgccacacgagtaaa 29307554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 7e-22; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 5355671 - 5355618
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5355671 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 5355618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 7267584 - 7267531
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7267584 agagaattgctgtttccacatgttgtttggctgtgccacacgagtaaaatacga 7267531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 30493292 - 30493345
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30493292 agagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaatacga 30493345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 5351872 - 5351821
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5351872 agagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 5351821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 15835352 - 15835301
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15835352 tagagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 15835301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 43536035 - 43536086
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43536035 agagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaatac 43536086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 208948 - 208994
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  208948 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 208994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 44100937 - 44100888
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44100937 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 44100888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 18000170 - 18000216
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  18000170 attgctgttcccacatgttgtttggttgtgccacacgagtaaaatac 18000216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 41564627 - 41564581
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  41564627 attgttgttcccacatgttgtttggctgtgccacacgagtaaaatac 41564581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 42499687 - 42499737
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  42499687 gagaattgctgttcccacatatagtttggctgtgccacacgagtaaaatac 42499737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 438
Target Start/End: Original strand, 10619942 - 10619983
Alignment:
Q  397 tgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10619942 tgttcccacatgttgtttggctgtgccacacgagtaaaatac 10619983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 17426538 - 17426487
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  17426538 agagaattgttgttcccacatatagtttggctgtgccacacgagtaaaatac 17426487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 42505902 - 42505851
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||||||    
T  42505902 agagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 42505851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 3935768 - 3935814
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||    
T  3935768 attgctgttcccacatatagtttggctgtgccacacgagtaaaatac 3935814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 10424774 - 10424820
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  10424774 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 10424820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 17420502 - 17420552
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  17420502 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 17420552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 39800792 - 39800742
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    ||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  39800792 agagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 39800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 43619281 - 43619235
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  43619281 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 43619235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 38950666 - 38950613
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||| |||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  38950666 agagtattgttgttcccacatgttgtttggctgtgtcgcacgagtaaaatacga 38950613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 39793897 - 39793946
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  39793897 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 39793946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 15831061 - 15831113
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||||||||    
T  15831061 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacga 15831113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 434
Target Start/End: Complemental strand, 22003537 - 22003494
Alignment:
Q  391 aattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  22003537 aattgctgttcccacatttggtttggctgtgccacacgagtaaa 22003494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 388 - 439
Target Start/End: Original strand, 28468575 - 28468626
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacg 439  Q
    |||||||| ||||||||| | | |||||||||||||||||||||||||||||    
T  28468575 gagaattgttgttcccacgtatagtttggctgtgccacacgagtaaaatacg 28468626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 30497089 - 30497038
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||| ||||||||||| | || |||||||||||||||||||||||||    
T  30497089 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatac 30497038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 20937832 - 20937878
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||    
T  20937832 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 20937878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 39951288 - 39951242
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||    
T  39951288 gagaattgctgttcccacatttggtttggctgtgtcacacgagtaaa 39951242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 43978474 - 43978520
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||| | || |||||||||||||||||||||||||    
T  43978474 attgctgttcccacatatagtatggctgtgccacacgagtaaaatac 43978520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 43984469 - 43984423
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||    
T  43984469 attgctgttcccacatatagtttggctgtgccacatgagtaaaatac 43984423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 24749619 - 24749672
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||||||  |  ||||||||||||| ||||||||||||    
T  24749619 agagaattgctgttcccacatgtgataaggctgtgccacactagtaaaatacga 24749672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 38945696 - 38945741
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||| | || ||||||||||||||||||||    
T  38945696 gagaattgctgttcccacatatagtatggctgtgccacacgagtaa 38945741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 432
Target Start/End: Original strand, 26543238 - 26543282
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagta 432  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||    
T  26543238 gagaattgttgttcccacatttggtttggctgtgccacacgagta 26543282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 29074143 - 29074095
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||||| | |||||| |||||||||||||||||    
T  29074143 tagagaattgttgttcccacatttggtttggttgtgccacacgagtaaa 29074095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 434
Target Start/End: Original strand, 3085970 - 3086017
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||| ||||||||||| | |||||| |||||||||||||||||    
T  3085970 agagaattgttgttcccacatttagtttggttgtgccacacgagtaaa 3086017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 434
Target Start/End: Complemental strand, 30803153 - 30803110
Alignment:
Q  391 aattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||    
T  30803153 aattgttgttcccacatttggtttggctgtgccacacgagtaaa 30803110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 3940864 - 3940818
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| ||||||||||| | || |||||||||||||||||||||||||    
T  3940864 attgttgttcccacatatagtatggctgtgccacacgagtaaaatac 3940818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 21998148 - 21998194
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | |||||| |||||||||||||||||    
T  21998148 gagaattgatgttcccacatatagtttggttgtgccacacgagtaaa 21998194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 39033033 - 39033079
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | |||||||||| |||||||||||||    
T  39033033 gagaattgttgttcccacatttggtttggctgtaccacacgagtaaa 39033079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 3803684 - 3803651
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctg 419  Q
    |||||||||||| |||||||||||||||||||||    
T  3803684 tagagaattgctattcccacatgttgtttggctg 3803651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 27276514 - 27276461
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||| |||||||||||||  |  ||||||||||||| ||||||||||||    
T  27276514 agagaattgttgttcccacatgtgataaggctgtgccacactagtaaaatacga 27276461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 39490103 - 39490055
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||||| | |||||||| ||||||||| |||||    
T  39490103 tagagaattgttgttcccacatttggtttggctatgccacacgggtaaa 39490055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 432
Target Start/End: Original strand, 39947534 - 39947578
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagta 432  Q
    |||||||| ||||||||||| | |||| |||||||||||||||||    
T  39947534 gagaattgttgttcccacatttggttttgctgtgccacacgagta 39947578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 43312663 - 43312707
Alignment:
Q  385 ctagagaattgctgttcccacatgttgtttggctgtgccacacga 429  Q
    ||||||||||| ||||||||||| | |||||||||| ||||||||    
T  43312663 ctagagaattgttgttcccacatttggtttggctgtaccacacga 43312707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 43313499 - 43313451
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||  ||||||||||||||||| |  |||||||||||    
T  43313499 tagagaattgctgttggcacatgttgtttggctgagaaacacgagtaaa 43313451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 35743719 - 35743667
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35743719 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 35743667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 438
Target Start/End: Original strand, 41844080 - 41844133
Alignment:
Q  385 ctagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41844080 ctagagaattgctcttcccacatgttgtttggctgtgccacacgagtaaaatac 41844133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 2858095 - 2858043
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2858095 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacga 2858043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 46697645 - 46697697
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46697645 gagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaatacga 46697697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 6745466 - 6745415
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6745466 agagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 6745415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 3953350 - 3953304
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3953350 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 3953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 8156446 - 8156492
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  8156446 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 8156492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 30943127 - 30943173
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30943127 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 30943173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 3502035 - 3501982
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3502035 agagaattgttgttcccacatgttgtttggttgtgccacacgagtaaaatacga 3501982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 25191854 - 25191907
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  25191854 agagaattgctcttcccacatgttgttcggctgtgccacacgagtaaaatacga 25191907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 9426565 - 9426617
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  9426565 gagaattgctgttcccacatgttgtttggttgtaccacacgagtaaaatacga 9426617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 34051486 - 34051435
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  34051486 agagaattgctgttcccacatatagtttggctgtgccacacgagtaaaatac 34051435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 42900111 - 42900161
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  42900111 gagagttgttgttcccacatgttgtttggctgtgccacacgagtaaaatac 42900161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 54392169 - 54392117
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||||    
T  54392169 tagagtattgctgttcccacatatagtttggctgtgccacacgagtaaaatac 54392117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 46388891 - 46388942
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||||||    
T  46388891 agagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 46388942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 2968064 - 2968014
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  2968064 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 2968014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 34045342 - 34045392
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  34045342 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 34045392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 46406763 - 46406713
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  46406763 gagaattgctgttcccacatatagtttggctgtgtcacacgagtaaaatac 46406713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 49138515 - 49138565
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  49138515 gagaattgctgttcccacatatagtttggctgtgccacatgagtaaaatac 49138565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 440
Target Start/End: Complemental strand, 1835466 - 1835414
Alignment:
Q  385 ctagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||||||||   ||| |||||||||||||||||||||||    
T  1835466 ctagagaattgctgttcccacatgtt---tggttgtgccacacgagtaaaatacga 1835414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 42904322 - 42904269
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||| | || |||||||||||||| ||||||||||||    
T  42904322 agagaattgctgttcccacatatagtatggctgtgccacaccagtaaaatacga 42904269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 29008820 - 29008872
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||||||||    
T  29008820 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacga 29008872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 50477114 - 50477166
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| ||||||| |||||||||| |||||||||||||    
T  50477114 gagaattgttgttcccacatcttgtttgactgtgccacatgagtaaaatacga 50477166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 434
Target Start/End: Original strand, 19988393 - 19988440
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  19988393 agagaattgctgttctcacatttggtttggctgtgccacacgagtaaa 19988440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 2950267 - 2950317
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | |||||| |||| ||||||||||||||||    
T  2950267 gagaattgctgttcccacatatagtttggttgtgtcacacgagtaaaatac 2950317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 16444542 - 16444592
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || ||| |||||||||||||||||||||    
T  16444542 gagaattgctgttcccacatatagtatggttgtgccacacgagtaaaatac 16444592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 46702164 - 46702114
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || ||| |||||||||||||||||||||    
T  46702164 gagaattgctgttcccacatatagtatggttgtgccacacgagtaaaatac 46702114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 49144595 - 49144545
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||| ||||||||||||||||    
T  49144595 gagaattgctgttcccacatatagtatggctgtgtcacacgagtaaaatac 49144545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 1835084 - 1835129
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||| | || ||||||||||||||||||||    
T  1835084 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 1835129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 387 - 432
Target Start/End: Complemental strand, 4008462 - 4008417
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagta 432  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||    
T  4008462 agagaattgctgttcccacatttggtttggccgtgccacacgagta 4008417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 12898825 - 12898780
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||| | |||||||| ||||||||||||||    
T  12898825 gagaattgctgttcccacatttggtttggctatgccacacgagtaa 12898780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 4002673 - 4002721
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||| ||| ||||||||||| | ||||||||||||||||||||||||    
T  4002673 tagagagttgttgttcccacatttggtttggctgtgccacacgagtaaa 4002721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 12897757 - 12897805
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||| | | ||||||||||||||||||||||||    
T  12897757 tagagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 12897805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 34543276 - 34543228
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||||| | |||||||||||||||| |||||||    
T  34543276 tagagaattgttgttcccacatttggtttggctgtgccacatgagtaaa 34543228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 50481522 - 50481470
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||| | || ||| |||||||||| ||||||||||||    
T  50481522 gagaattgctgttcccacatatagtatggttgtgccacaccagtaaaatacga 50481470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 387 - 419
Target Start/End: Complemental strand, 50957806 - 50957774
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctg 419  Q
    |||||||||||||||||||||||||||||||||    
T  50957806 agagaattgctgttcccacatgttgtttggctg 50957774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 54386066 - 54386117
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||| ||| ||||| | || |||||||||||||||||||||||||    
T  54386066 agagaattgctcttctcacatatagtatggctgtgccacacgagtaaaatac 54386117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 3493523 - 3493569
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| | ||||||||| | ||||||||||||||||||||||||    
T  3493523 gagaattgttcttcccacatttagtttggctgtgccacacgagtaaa 3493569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 3497217 - 3497263
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| | ||||||||| | ||||||||||||||||||||||||    
T  3497217 gagaattgttcttcccacatttagtttggctgtgccacacgagtaaa 3497263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 11249662 - 11249616
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||| | |  |||||||||||||||||||||||    
T  11249662 gagaattgctgttcccacttttactttggctgtgccacacgagtaaa 11249616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 27739705 - 27739659
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||| | | ||||||||||||||||||||||||    
T  27739705 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 27739659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 28817139 - 28817093
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||| | | ||||||||||||||||||||||||    
T  28817139 gagaattgatgttcccacttttggtttggctgtgccacacgagtaaa 28817093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 50998818 - 50998772
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||| ||| | ||||||||||||||||||||||||    
T  50998818 gagaattgttgttcccgcatttggtttggctgtgccacacgagtaaa 50998772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 432
Target Start/End: Original strand, 3975665 - 3975710
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagta 432  Q
    ||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  3975665 agagaattgttgtacccacatttggtttggctgtgccacacgagta 3975710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 16851061 - 16851106
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||| ||||||||||| | |||||||| ||||||||||||||    
T  16851061 gagaattgttgttcccacatttagtttggctatgccacacgagtaa 16851106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 2266963 - 2267011
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||||| | ||||||| ||| ||||||||||||    
T  2266963 tagagaattgatgttcccacatttggtttggccgtgtcacacgagtaaa 2267011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 419
Target Start/End: Original strand, 2743331 - 2743363
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctg 419  Q
    ||||||||| |||||||||||||||||||||||    
T  2743331 agagaattgttgttcccacatgttgtttggctg 2743363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 419
Target Start/End: Complemental strand, 9429989 - 9429957
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctg 419  Q
    |||||||||||||||||||||| ||||||||||    
T  9429989 agagaattgctgttcccacatggtgtttggctg 9429957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 8548808 - 8548756
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8548808 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 8548756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 19928984 - 19928934
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19928984 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 19928934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 3728668 - 3728721
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3728668 agagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaatacga 3728721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 20354070 - 20354024
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20354070 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 20354024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 20556836 - 20556882
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20556836 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 20556882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 38771567 - 38771613
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  38771567 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 38771613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 3993978 - 3993933
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3993978 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 3993933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 3943912 - 3943958
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  3943912 attgctgtttccacatgttgtttggctgtgccacacgagtaaaatac 3943958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 19914401 - 19914447
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  19914401 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 19914447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 15051487 - 15051435
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  15051487 gagaattgctcttcccacatgttgtttggttgtgtcacacgagtaaaatacga 15051435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 3732492 - 3732442
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  3732492 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 3732442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 19924689 - 19924739
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  19924689 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 19924739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 402 - 440
Target Start/End: Complemental strand, 29622549 - 29622511
Alignment:
Q  402 ccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29622549 ccacatgttgtttggctgtgccacacgagtaaaatacga 29622511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 586744 - 586697
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||||    
T  586744 agagaattgctgttcccacttttggtttggctgtgccacacgagtaaa 586697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 13629338 - 13629388
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || ||| |||||||||||||||||||||    
T  13629338 gagaattgctgttcccacatatagtatggttgtgccacacgagtaaaatac 13629388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 426
Target Start/End: Complemental strand, 29622579 - 29622545
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccaca 426  Q
    |||||||||||||||||||||||||||||||||||    
T  29622579 attgctgttcccacatgttgtttggctgtgccaca 29622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 30889995 - 30890045
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||||||    
T  30889995 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatac 30890045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 38633292 - 38633246
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||    
T  38633292 gagaattgttgttcccacatatagtttggctgtgccacacgagtaaa 38633246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 8473717 - 8473769
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||| |||||||||||| | || ||| |||||||||||||||||||||||    
T  8473717 gagaattactgttcccacatatagtatggatgtgccacacgagtaaaatacga 8473769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 26879434 - 26879382
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || |||||||||||||| ||||||||||||    
T  26879434 gagaattgttgttcccacatatagtatggctgtgccacaccagtaaaatacga 26879382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 30905705 - 30905757
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||||  |  ||||||||||||| ||||||||||||    
T  30905705 gagaattgctgttcccacatgtgataaggctgtgccacaccagtaaaatacga 30905757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 434
Target Start/End: Original strand, 4883167 - 4883214
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||| ||||||||||| | ||||||||||| ||||||||||||    
T  4883167 agagaattgttgttcccacatttggtttggctgtgtcacacgagtaaa 4883214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 419
Target Start/End: Complemental strand, 30910142 - 30910111
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctg 419  Q
    ||||||||||||||||||||||||||||||||    
T  30910142 gagaattgctgttcccacatgttgtttggctg 30910111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 2365169 - 2365215
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||  | ||||||||||||||||||||||||    
T  2365169 gagaattgttgttcccacaattggtttggctgtgccacacgagtaaa 2365215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 30195522 - 30195476
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | |||||||| |||||||||||||||    
T  30195522 gagaattgttgttcccacatttggtttggctatgccacacgagtaaa 30195476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 43011762 - 43011808
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||| | | ||||||||||||||||||||||||    
T  43011762 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 43011808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 43012783 - 43012737
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||| | |||||||| |||||||||||||||    
T  43012783 gagaattgctcttcccacatttggtttggctatgccacacgagtaaa 43012737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 47652662 - 47652708
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||| | | ||||||||||| ||||||||||||    
T  47652662 gagaattgctgttcccacgtttggtttggctgtgtcacacgagtaaa 47652708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 433
Target Start/End: Original strand, 585589 - 585634
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||| | |||||||| ||||||| ||||||    
T  585589 gagaattgctgttcccacatttagtttggctatgccacaggagtaa 585634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 44621257 - 44621204
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||| ||||||||| | | || ||| |||||||||||||||||||||||    
T  44621257 agagaattgttgttcccacgtatagtatggttgtgccacacgagtaaaatacga 44621204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 5077875 - 5077927
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| |||||||||||||  |  ||||||||||||| ||||||||||||    
T  5077875 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacga 5077927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 6562300 - 6562248
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||||  |  || |||||||||| ||||||||||||    
T  6562300 gagaattgctgttcccacatgtgataaggttgtgccacactagtaaaatacga 6562248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 419
Target Start/End: Complemental strand, 29356811 - 29356779
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctg 419  Q
    ||||||||| |||||||||||||||||||||||    
T  29356811 agagaattgttgttcccacatgttgtttggctg 29356779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 603712 - 603763
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  603712 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 603763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 10097849 - 10097902
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10097849 agagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacga 10097902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 7004 - 7050
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7004 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 7050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 30791143 - 30791097
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30791143 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 30791097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 440
Target Start/End: Complemental strand, 41884267 - 41884213
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  41884267 tagagaattgctattcccacatgttgtgtggctgtgccacacgagtaaaatacga 41884213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 43619643 - 43619689
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43619643 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 43619689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 35606723 - 35606775
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  35606723 gagaattgttgttcccacatgttgtttgcctgtgccacacgagtaaaatacga 35606775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 16636382 - 16636335
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16636382 agagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 16636335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 434
Target Start/End: Original strand, 17459256 - 17459303
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17459256 agagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 17459303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 17593958 - 17593911
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17593958 agagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 17593911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 48407461 - 48407410
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  48407461 agagaattgctcttcccacatgttgtttggctgtgccacacgagtaatatac 48407410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 8185 - 8139
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  8185 gagaattgctgttcccacatgttgtttggctgtgccacacaagtaaa 8139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 20566499 - 20566448
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  20566499 agagaattgttgttcccacatatagtttggctgtgccacacgagtaaaatac 20566448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 45768000 - 45767950
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  45768000 agagtattgctgttcccacat-ttgtttggctgtgccacacgagtaaaatac 45767950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 10098267 - 10098317
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  10098267 gagaattgttgttcccacatatagtttggctgtgccacacgagtaaaatac 10098317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 15074367 - 15074315
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||||||||    
T  15074367 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacga 15074315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 35610554 - 35610502
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||| | || |||||||||||||| ||||||||||||    
T  35610554 gagaattgctgttcccacatatagtatggctgtgccacaccagtaaaatacga 35610502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 42582048 - 42582096
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||    
T  42582048 tagagaattgctgttcccacatttggtttggctatgccacacgagtaaa 42582096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 46907472 - 46907520
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||    
T  46907472 tagagaattgctgttcccacatttggtttggctatgccacacgagtaaa 46907520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 9365575 - 9365630
Alignment:
Q  383 aactagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| ||| ||||||||||| |||| | ||||||||||||||||||||||||||||    
T  9365575 aactcgagtattgctgttcctacatatagtttggctgtgccacacgagtaaaatac 9365630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 12210729 - 12210682
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||||||||||||||| | |||||||||||||| |||||||||    
T  12210729 agagaattgctgttcccacatttggtttggctgtgccatacgagtaaa 12210682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 388 - 439
Target Start/End: Complemental strand, 42508166 - 42508115
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacg 439  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||||    
T  42508166 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacg 42508115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 46908612 - 46908565
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||||    
T  46908612 agagaattgctgttcccacttttggtttggctgtgccacacgagtaaa 46908565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 27656973 - 27657019
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||    
T  27656973 gagaattgctgttcccacatttggtttggttgtgccacacgagtaaa 27657019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 10098256 - 10098211
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||||||||||||| | || ||||||||||||||||||||    
T  10098256 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 10098211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 13921404 - 13921356
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||||| | |||||| |||||||||||||||||    
T  13921404 tagagaattgttgttcccacatttggtttggttgtgccacacgagtaaa 13921356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 17465852 - 17465800
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || |||||||||||||| ||||||||||||    
T  17465852 gagaattgatgttcccacatatagtatggctgtgccacaccagtaaaatacga 17465800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 17587362 - 17587414
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || |||||||||||||| ||||||||||||    
T  17587362 gagaattgatgttcccacatatagtatggctgtgccacaccagtaaaatacga 17587414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 41880448 - 41880500
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || ||| |||||||||||||||||||||||    
T  41880448 gagaattgttgttcccacatatagtatggttgtgccacacgagtaaaatacga 41880500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 10524496 - 10524449
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||| ||||||||||| | ||||||||||| ||||||||||||    
T  10524496 agagaattgttgttcccacatttggtttggctgtgtcacacgagtaaa 10524449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 48403305 - 48403356
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||| |||||||||||||||| | || |||||||||||||| ||||||||||    
T  48403305 agagtattgctgttcccacatatagtatggctgtgccacaccagtaaaatac 48403356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 49141757 - 49141710
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||||| ||||||||||| | |||||||| |||||||||||||||    
T  49141757 agagaattgttgttcccacatttggtttggctatgccacacgagtaaa 49141710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 432
Target Start/End: Complemental strand, 7975750 - 7975704
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagta 432  Q
    |||||||||| ||||||||||| | |||||| |||||||||||||||    
T  7975750 tagagaattgttgttcccacatttggtttggttgtgccacacgagta 7975704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 18109913 - 18109867
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | |||||||||||| |||||||||||    
T  18109913 gagaattgttgttcccacatttggtttggctgtgctacacgagtaaa 18109867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 20564007 - 20564057
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || ||| ||||||| |||||||||||||    
T  20564007 gagaattgctgttcccacatatagtatggttgtgccatacgagtaaaatac 20564057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 434
Target Start/End: Complemental strand, 40141361 - 40141319
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  40141361 attgttgttcccacatatagtttggctgtgccacacgagtaaa 40141319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 42795218 - 42795172
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||| | | ||||||||||||||||||||||||    
T  42795218 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 42795172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 618864 - 618819
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaa 433  Q
    |||||||||| ||||||||| | || ||||||||||||||||||||    
T  618864 gagaattgctcttcccacatatagtatggctgtgccacacgagtaa 618819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 18105306 - 18105358
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacg 439  Q
    ||||||||| ||||||||||| | || |||| || ||||||||||||||||||    
T  18105306 agagaattgttgttcccacatatagtatggccgtaccacacgagtaaaatacg 18105358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 37814516 - 37814566
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37814516 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 37814566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 28238072 - 28238125
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28238072 agagaattgctcttcccacatgttgtttggctgtgccacacgagtaaaatacga 28238125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 28876580 - 28876629
Alignment:
Q  391 aattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28876580 aattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacga 28876629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 14281035 - 14280989
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  14281035 attgctgttcccacatgttgtttggctgtgtcacacgagtaaaatac 14280989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 19035139 - 19035189
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  19035139 gagaattgctgttcccacatatagtttgactgtgccacacgagtaaaatac 19035189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 19041256 - 19041206
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  19041256 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 19041206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 27659874 - 27659920
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  27659874 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 27659920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 11027027 - 11027079
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||| ||||||||||| | || |||||||||||||||||||||||||    
T  11027027 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatac 11027079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 11033603 - 11033551
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||||| | || ||||||||||||| |||||||||||    
T  11033603 tagagaattgctgttcccacatatagtatggctgtgccacatgagtaaaatac 11033551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 38860307 - 38860257
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||||||    
T  38860307 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatac 38860257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 28241938 - 28241889
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  28241938 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 28241889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 8580620 - 8580572
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||| ||||||||| | |||| |||||||||||||||||||    
T  8580620 tagagaattgctattcccacatatagtttagctgtgccacacgagtaaa 8580572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 432
Target Start/End: Original strand, 13837658 - 13837702
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagta 432  Q
    |||||||||||||||||||| |  |||||||||||||||||||||    
T  13837658 gagaattgctgttcccacatttgctttggctgtgccacacgagta 13837702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 419
Target Start/End: Original strand, 13563602 - 13563633
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctg 419  Q
    ||||||||||||||||||||||||||||||||    
T  13563602 gagaattgctgttcccacatgttgtttggctg 13563633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 3891418 - 3891464
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||| | |  |||||||||||||||||||||||    
T  3891418 gagaattgctgttcccacttttactttggctgtgccacacgagtaaa 3891464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 27867959 - 27867907
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| |||||||||||||  |  ||||||||||||| ||||||||||||    
T  27867959 gagaattgttgttcccacatgtgataaggctgtgccacactagtaaaatacga 27867907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 30825984 - 30826033
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30825984 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 30826033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 27641891 - 27641840
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27641891 agagaattgctgttcccacatgttgtttggctgtgccacactagtaaaatac 27641840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 18351782 - 18351732
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18351782 gagaattgctgttctcacatgttgtttggctgtgccacacgagtaaaatac 18351732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 1608256 - 1608302
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  1608256 attgctgttcccacatgttgtttggctgtgccacacgtgtaaaatac 1608302  T

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Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 11694199 - 11694149
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  11694199 gagaattgctgttcccacatatagtttggctgtgccacacgagtaaaatac 11694149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 26712365 - 26712313
Alignment:
Q  385 ctagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 437  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  26712365 ctagcgaattgatgttcccacatgttgtttagctgtgccacacgagtaaaata 26712313  T

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Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 6761010 - 6760964
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  6761010 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 6760964  T

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Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 27616649 - 27616699
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  27616649 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 27616699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 438
Target Start/End: Complemental strand, 6207235 - 6207182
Alignment:
Q  385 ctagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||||||| ||||||||| | ||||| ||||||||||||||||||||||    
T  6207235 ctagagaattgcttttcccacatatagtttgactgtgccacacgagtaaaatac 6207182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 13382561 - 13382609
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  13382561 tagagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 13382609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 2109452 - 2109498
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||    
T  2109452 gagaattgttgttcccactttttgtttggctgtgccacacgagtaaa 2109498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 440
Target Start/End: Complemental strand, 30829786 - 30829738
Alignment:
Q  392 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||| | || ||| |||||||||||||||||||||||    
T  30829786 attgctgttcccacatatagtatggttgtgccacacgagtaaaatacga 30829738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 11688047 - 11688098
Alignment:
Q  387 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    ||||||||| |||||||||||   || |||||||||||||||||||||||||    
T  11688047 agagaattgttgttcccacatacagtatggctgtgccacacgagtaaaatac 11688098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 13164395 - 13164349
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | |||||||| |||||||||||||||    
T  13164395 gagaattgttgttcccacatttagtttggctatgccacacgagtaaa 13164349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 8707917 - 8707962
Alignment:
Q  389 agaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    ||||||| ||||||||||| | ||||||| ||||||||||||||||    
T  8707917 agaattgttgttcccacatttggtttggccgtgccacacgagtaaa 8707962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 84481 - 84531
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  84481 gagaattgctgttcccacatatagtttggctgtgccacacgagtaaaatac 84531  T

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Target: scaffold1606 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 100 - 50
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  100 gagaattgttgttcccacatatagtttggctgtgccacacgagtaaaatac 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 41195 - 41145
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 438  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||||    
T  41195 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatac 41145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 763 - 817
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||||||  |  ||||||||||||| ||||||||||||    
T  763 tagagaattgctgttcccacatgtgataaggctgtgccacaccagtaaaatacga 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 11592 - 11546
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||    
T  11592 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 11546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 298 - 245
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacg 439  Q
    |||||||||| ||||||||||| | ||||||||||||||||| |||||| ||||    
T  298 tagagaattgttgttcccacatttggtttggctgtgccacacaagtaaattacg 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 69361 - 69313
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||| ||||||||| | | ||||||||||||||||||||||||    
T  69361 tagagaattgatgttcccacttttggtttggctgtgccacacgagtaaa 69313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 68349 - 68395
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 434  Q
    |||||||||||||||||||| | |||||||| ||||||| |||||||    
T  68349 gagaattgctgttcccacatttggtttggctatgccacatgagtaaa 68395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 432
Target Start/End: Original strand, 7350 - 7396
Alignment:
Q  386 tagagaattgctgttcccacatgttgtttggctgtgccacacgagta 432  Q
    |||||||||| ||||||||||| | ||||||||||| ||||||||||    
T  7350 tagagaattgttgttcccacatctggtttggctgtgacacacgagta 7396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 561 - 509
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||| ||||||||||| | || ||| |||||||||| ||||||||||||    
T  561 gagaattgttgttcccacatatagtatggttgtgccacaccagtaaaatacga 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 17490 - 17438
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    ||||||||||||||||||||||  |  || |||||||||| ||||||||||||    
T  17490 gagaattgctgttcccacatgtgataaggttgtgccacactagtaaaatacga 17438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 858 - 810
Alignment:
Q  391 aattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacg 439  Q
    ||||| ||||||||||| | || ||||||||||||| ||||||||||||    
T  858 aattgttgttcccacatatagtatggctgtgccacatgagtaaaatacg 810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 11235 - 11287
Alignment:
Q  388 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacga 440  Q
    |||||||||||||||||||| |  |  ||||||||||||| ||||||||||||    
T  11235 gagaattgctgttcccacatttgataaggctgtgccacactagtaaaatacga 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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