View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11567_high_16 (Length: 259)

Name: NF11567_high_16
Description: NF11567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11567_high_16
NF11567_high_16
[»] chr6 (53 HSPs)
chr6 (86-241)||(5882911-5883066)
chr6 (95-231)||(5890146-5890282)
chr6 (108-234)||(5763927-5764053)
chr6 (108-234)||(5767462-5767588)
chr6 (108-234)||(5770997-5771123)
chr6 (108-234)||(5774532-5774658)
chr6 (108-234)||(5778067-5778193)
chr6 (108-234)||(5781602-5781728)
chr6 (108-234)||(5785137-5785263)
chr6 (108-234)||(5788672-5788798)
chr6 (108-234)||(5792207-5792333)
chr6 (108-234)||(5795742-5795868)
chr6 (108-234)||(5799277-5799403)
chr6 (108-234)||(5802812-5802938)
chr6 (108-234)||(5806347-5806473)
chr6 (108-234)||(5809882-5810008)
chr6 (108-234)||(5813417-5813543)
chr6 (108-234)||(5816952-5817078)
chr6 (108-234)||(5820487-5820613)
chr6 (106-228)||(5880196-5880318)
chr6 (1-87)||(19996682-19996768)
chr6 (107-231)||(5829813-5829937)
chr6 (107-200)||(5826967-5827060)
chr6 (106-218)||(5755465-5755577)
chr6 (106-218)||(5760943-5761055)
chr6 (116-231)||(5852757-5852872)
chr6 (34-87)||(1605579-1605632)
chr6 (34-87)||(7761301-7761354)
chr6 (34-87)||(29260192-29260245)
chr6 (35-90)||(4129432-4129487)
chr6 (34-88)||(8626481-8626535)
chr6 (34-87)||(15064918-15064971)
chr6 (34-87)||(17942443-17942496)
chr6 (34-80)||(30734707-30734753)
chr6 (34-87)||(13757208-13757261)
chr6 (38-81)||(30734836-30734879)
chr6 (46-87)||(19996322-19996363)
chr6 (34-87)||(8235624-8235677)
chr6 (35-72)||(31559961-31559998)
chr6 (49-87)||(15064695-15064733)
chr6 (49-87)||(17942682-17942720)
chr6 (59-89)||(25476042-25476072)
chr6 (59-88)||(22055006-22055035)
chr6 (59-87)||(4147931-4147959)
chr6 (59-87)||(18668688-18668716)
chr6 (59-87)||(18668922-18668950)
chr6 (59-87)||(19087958-19087986)
chr6 (59-87)||(19088192-19088220)
chr6 (59-87)||(20437017-20437045)
chr6 (59-87)||(24623941-24623969)
chr6 (59-87)||(32414913-32414941)
chr6 (59-87)||(32420754-32420782)
chr6 (59-87)||(32671816-32671844)
[»] scaffold0257 (2 HSPs)
scaffold0257 (1-87)||(23467-23553)
scaffold0257 (46-89)||(23872-23915)
[»] chr8 (34 HSPs)
chr8 (1-87)||(41307928-41308014)
chr8 (1-89)||(45278668-45278756)
chr8 (1-87)||(8697865-8697951)
chr8 (1-87)||(10646592-10646678)
chr8 (1-88)||(40486420-40486507)
chr8 (34-89)||(27034995-27035050)
chr8 (34-88)||(43275621-43275675)
chr8 (34-87)||(3585451-3585504)
chr8 (34-87)||(40918953-40919006)
chr8 (34-97)||(40058527-40058590)
chr8 (34-87)||(2540155-2540208)
chr8 (34-87)||(7146913-7146966)
chr8 (34-87)||(11174447-11174500)
chr8 (34-87)||(11646549-11646602)
chr8 (35-96)||(36068071-36068132)
chr8 (34-88)||(37345570-37345624)
chr8 (34-80)||(30999745-30999791)
chr8 (43-90)||(20546520-20546567)
chr8 (46-92)||(41305757-41305803)
chr8 (56-94)||(10647268-10647306)
chr8 (59-88)||(132016-132045)
chr8 (46-87)||(28562421-28562462)
chr8 (46-87)||(28567919-28567960)
chr8 (46-87)||(28575512-28575553)
chr8 (46-87)||(45278013-45278053)
chr8 (59-87)||(616783-616811)
chr8 (59-87)||(617017-617045)
chr8 (59-87)||(623176-623204)
chr8 (59-87)||(623410-623438)
chr8 (55-87)||(5878317-5878349)
chr8 (59-87)||(14237514-14237542)
chr8 (59-87)||(40494618-40494646)
chr8 (49-89)||(40918729-40918769)
chr8 (59-87)||(42587482-42587510)
[»] chr7 (25 HSPs)
chr7 (1-87)||(25060100-25060186)
chr7 (1-87)||(2911515-2911601)
chr7 (34-87)||(10981508-10981561)
chr7 (34-87)||(27813811-27813864)
chr7 (34-90)||(47110448-47110504)
chr7 (35-90)||(25614576-25614631)
chr7 (34-85)||(36453348-36453399)
chr7 (34-87)||(40348960-40349013)
chr7 (46-81)||(25059456-25059491)
chr7 (59-89)||(47156025-47156055)
chr7 (46-87)||(2910859-2910900)
chr7 (59-88)||(36623307-36623336)
chr7 (59-87)||(16778505-16778533)
chr7 (59-87)||(20885103-20885131)
chr7 (59-87)||(25566548-25566576)
chr7 (59-87)||(28061515-28061543)
chr7 (59-87)||(28061749-28061777)
chr7 (59-87)||(36623542-36623570)
chr7 (59-87)||(38852081-38852109)
chr7 (59-87)||(41897988-41898016)
chr7 (59-87)||(41898222-41898250)
chr7 (59-87)||(42877386-42877414)
chr7 (59-87)||(46103370-46103398)
chr7 (59-87)||(46103597-46103625)
chr7 (59-87)||(47156261-47156289)
[»] chr3 (34 HSPs)
chr3 (1-87)||(12094582-12094668)
chr3 (1-87)||(44277422-44277508)
chr3 (1-93)||(19911503-19911595)
chr3 (1-87)||(38805245-38805331)
chr3 (1-78)||(4226716-4226791)
chr3 (34-87)||(29375138-29375191)
chr3 (34-94)||(36881275-36881335)
chr3 (1-87)||(4235751-4235835)
chr3 (34-92)||(27707388-27707446)
chr3 (34-89)||(198853-198908)
chr3 (34-87)||(3383076-3383129)
chr3 (34-87)||(13364843-13364896)
chr3 (34-87)||(19241892-19241945)
chr3 (34-87)||(43750137-43750190)
chr3 (34-89)||(46694334-46694389)
chr3 (34-80)||(32835180-32835226)
chr3 (1-87)||(40931622-40931708)
chr3 (46-87)||(19912174-19912215)
chr3 (46-87)||(38806341-38806382)
chr3 (34-94)||(23088155-23088215)
chr3 (46-89)||(44276773-44276816)
chr3 (44-87)||(48963156-48963199)
chr3 (46-87)||(12095423-12095464)
chr3 (59-92)||(13499569-13499602)
chr3 (34-87)||(13702769-13702822)
chr3 (59-90)||(42761717-42761748)
chr3 (59-89)||(19823898-19823928)
chr3 (59-93)||(42761477-42761511)
chr3 (46-87)||(37293437-37293478)
chr3 (59-87)||(6910568-6910596)
chr3 (59-87)||(20765430-20765458)
chr3 (59-87)||(27010474-27010502)
chr3 (59-87)||(27010708-27010736)
chr3 (59-87)||(42490430-42490458)
[»] chr2 (18 HSPs)
chr2 (1-87)||(34224345-34224431)
chr2 (34-87)||(1102503-1102556)
chr2 (34-87)||(3518908-3518961)
chr2 (34-87)||(12969963-12970016)
chr2 (34-86)||(23366790-23366842)
chr2 (34-87)||(37673961-37674014)
chr2 (34-87)||(39938170-39938223)
chr2 (49-89)||(12969738-12969778)
chr2 (49-87)||(40756911-40756949)
chr2 (59-88)||(11841592-11841621)
chr2 (59-88)||(44365391-44365420)
chr2 (59-87)||(2183191-2183219)
chr2 (59-87)||(5405230-5405258)
chr2 (59-87)||(7608283-7608311)
chr2 (59-87)||(8042256-8042284)
chr2 (59-87)||(19141066-19141094)
chr2 (59-87)||(19141300-19141328)
chr2 (59-87)||(39358146-39358174)
[»] chr1 (31 HSPs)
chr1 (1-87)||(3943060-3943146)
chr1 (1-87)||(13984958-13985044)
chr1 (1-90)||(41959075-41959164)
chr1 (1-87)||(9588670-9588756)
chr1 (1-87)||(44228196-44228281)
chr1 (8-79)||(1168369-1168440)
chr1 (34-89)||(284331-284386)
chr1 (34-89)||(23045503-23045558)
chr1 (34-86)||(27211188-27211240)
chr1 (34-88)||(321625-321679)
chr1 (34-88)||(24772129-24772183)
chr1 (34-80)||(46771644-46771690)
chr1 (34-87)||(40783881-40783934)
chr1 (46-87)||(44227848-44227889)
chr1 (45-87)||(47038085-47038127)
chr1 (46-87)||(3943763-3943804)
chr1 (34-87)||(23526240-23526293)
chr1 (46-87)||(41959809-41959850)
chr1 (46-87)||(9589631-9589672)
chr1 (49-94)||(321865-321910)
chr1 (59-88)||(16120674-16120703)
chr1 (59-87)||(6402644-6402672)
chr1 (55-87)||(10845481-10845513)
chr1 (59-87)||(11641067-11641095)
chr1 (56-88)||(13984436-13984468)
chr1 (59-87)||(30701718-30701746)
chr1 (59-87)||(36399332-36399360)
chr1 (59-87)||(36757486-36757514)
chr1 (59-87)||(40771772-40771800)
chr1 (59-87)||(40772006-40772034)
chr1 (59-87)||(52024260-52024288)
[»] scaffold0087 (10 HSPs)
scaffold0087 (107-231)||(33885-34009)
scaffold0087 (106-218)||(12509-12621)
scaffold0087 (105-235)||(39932-40062)
scaffold0087 (116-228)||(55139-55251)
scaffold0087 (116-228)||(19533-19645)
scaffold0087 (116-228)||(29881-29993)
scaffold0087 (96-198)||(821-924)
scaffold0087 (96-198)||(15710-15813)
scaffold0087 (96-213)||(5511-5630)
scaffold0087 (96-213)||(22626-22745)
[»] chr4 (32 HSPs)
chr4 (1-72)||(19361662-19361733)
chr4 (35-87)||(40122710-40122762)
chr4 (34-87)||(14261044-14261097)
chr4 (34-87)||(21310425-21310478)
chr4 (34-87)||(21661759-21661812)
chr4 (34-87)||(21670523-21670576)
chr4 (34-87)||(25704651-25704704)
chr4 (34-87)||(34324807-34324860)
chr4 (35-87)||(12071561-12071613)
chr4 (34-87)||(22321491-22321544)
chr4 (34-87)||(24706471-24706524)
chr4 (1-72)||(20541476-20541547)
chr4 (35-87)||(44568837-44568889)
chr4 (34-89)||(20249236-20249291)
chr4 (34-85)||(31892240-31892291)
chr4 (59-90)||(2760727-2760758)
chr4 (59-90)||(55209571-55209602)
chr4 (59-89)||(2760961-2760991)
chr4 (49-91)||(12071799-12071841)
chr4 (46-80)||(19362189-19362223)
chr4 (59-89)||(19433356-19433386)
chr4 (59-89)||(55209808-55209838)
chr4 (59-87)||(4467520-4467548)
chr4 (59-87)||(26169986-26170014)
chr4 (59-87)||(26170221-26170249)
chr4 (59-87)||(29830343-29830371)
chr4 (59-87)||(35381128-35381156)
chr4 (59-87)||(38416650-38416678)
chr4 (59-87)||(38416884-38416912)
chr4 (59-87)||(44232077-44232105)
chr4 (59-87)||(45292066-45292094)
chr4 (59-87)||(47386520-47386548)
[»] chr5 (19 HSPs)
chr5 (1-87)||(15305182-15305265)
chr5 (34-89)||(30720716-30720771)
chr5 (34-87)||(12807077-12807130)
chr5 (34-87)||(16983258-16983311)
chr5 (34-87)||(25773649-25773702)
chr5 (34-87)||(37900848-37900901)
chr5 (34-87)||(10285281-10285334)
chr5 (34-87)||(40886834-40886887)
chr5 (34-89)||(36561323-36561378)
chr5 (35-76)||(7277647-7277688)
chr5 (46-87)||(15304822-15304863)
chr5 (49-92)||(25683224-25683267)
chr5 (59-89)||(33387453-33387483)
chr5 (59-88)||(978311-978340)
chr5 (61-90)||(24992374-24992403)
chr5 (59-87)||(978077-978105)
chr5 (59-87)||(8086264-8086292)
chr5 (59-87)||(9502627-9502655)
chr5 (59-87)||(14634157-14634185)
[»] scaffold1770 (1 HSPs)
scaffold1770 (35-90)||(167-222)
[»] scaffold1431 (1 HSPs)
scaffold1431 (34-87)||(123-176)
[»] scaffold0127 (1 HSPs)
scaffold0127 (105-210)||(16563-16673)
[»] scaffold0054 (2 HSPs)
scaffold0054 (34-87)||(45454-45507)
scaffold0054 (49-89)||(45692-45732)
[»] scaffold0022 (1 HSPs)
scaffold0022 (59-90)||(100644-100675)


Alignment Details
Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 86 - 241
Target Start/End: Complemental strand, 5883066 - 5882911
Alignment:
Q  86 taattattatttactttattacttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattcc 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5883066 taattattatttactttattacttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattccaaactcgaagagagattcc 5882967  T
Q  186 aaaaccatttaggaactgaatctgaaataccactatttgagatgtctagagttgta 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5882966 aaaaccatttaggaactgaatctgaaataccactatttgagatgtctagagttgta 5882911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 95 - 231
Target Start/End: Original strand, 5890146 - 5890282
Alignment:
Q  95 tttactttattacttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatt 194  Q
    ||||||||  |||||| |||||| |||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5890146 tttactttcatacttgtaaatgactttggcaaaggtccattaagttggttatgtgaaacattcaagtattgtaaactcgaagagagattccaaaaccatt 5890245  T
Q  195 taggaactgaatctgaaataccactatttgagatgtc 231  Q
    |||||| |||||| |||||||||| ||| ||||||||    
T  5890246 taggaaatgaatccgaaataccacaattagagatgtc 5890282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5764053 - 5763927
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5764053 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5763954  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5763953 tgaaataccactacttgagatgtctag 5763927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5767588 - 5767462
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5767588 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5767489  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5767488 tgaaataccactacttgagatgtctag 5767462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5771123 - 5770997
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5771123 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5771024  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5771023 tgaaataccactacttgagatgtctag 5770997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5774658 - 5774532
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5774658 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5774559  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5774558 tgaaataccactacttgagatgtctag 5774532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5778193 - 5778067
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5778193 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5778094  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5778093 tgaaataccactacttgagatgtctag 5778067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5781728 - 5781602
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5781728 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5781629  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5781628 tgaaataccactacttgagatgtctag 5781602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5785263 - 5785137
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5785263 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5785164  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5785163 tgaaataccactacttgagatgtctag 5785137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5788798 - 5788672
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5788798 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5788699  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5788698 tgaaataccactacttgagatgtctag 5788672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5792333 - 5792207
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5792333 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5792234  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5792233 tgaaataccactacttgagatgtctag 5792207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5795868 - 5795742
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5795868 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5795769  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5795768 tgaaataccactacttgagatgtctag 5795742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5799403 - 5799277
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5799403 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5799304  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5799303 tgaaataccactacttgagatgtctag 5799277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5802938 - 5802812
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5802938 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5802839  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5802838 tgaaataccactacttgagatgtctag 5802812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5806473 - 5806347
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5806473 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5806374  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5806373 tgaaataccactacttgagatgtctag 5806347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5810008 - 5809882
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5810008 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5809909  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5809908 tgaaataccactacttgagatgtctag 5809882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5813543 - 5813417
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5813543 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5813444  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5813443 tgaaataccactacttgagatgtctag 5813417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5817078 - 5816952
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5817078 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5816979  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5816978 tgaaataccactacttgagatgtctag 5816952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 5820613 - 5820487
Alignment:
Q  108 ttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatc 207  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||||||    
T  5820613 ttggaattgactttggcaagggtccattaagtttgttatatgaaacattcaagtatatcaaacttgaagagaggttccaaaaccatttaggaaatgaatc 5820514  T
Q  208 tgaaataccactatttgagatgtctag 234  Q
    ||||||||||||| |||||||||||||    
T  5820513 tgaaataccactacttgagatgtctag 5820487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 5880318 - 5880196
Alignment:
Q  106 acttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaa 205  Q
    |||||||||  ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  5880318 acttggaaagtattttggcaagtgtccatgaagtttgttatgtgaaacattcaagtattgcaaacttgaagatagattccaaaaccatttaggaaatgaa 5880219  T
Q  206 tctgaaataccactatttgagat 228  Q
    ||||||||||||||||| |||||    
T  5880218 tctgaaataccactattggagat 5880196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 19996682 - 19996768
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19996682 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 19996768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 5829937 - 5829813
Alignment:
Q  107 cttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaat 206  Q
    |||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| |||||    
T  5829937 cttgtaaatgattttggcaaggttcctttaagtatgttatgtgaaacattcaagtatcgcaaactcaaagatagattccaaaaccatttaggaaatgaat 5829838  T
Q  207 ctgaaataccactatttgagatgtc 231  Q
    ||||||||||| |||  ||||||||    
T  5829837 ctgaaataccattatgagagatgtc 5829813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 5827060 - 5826967
Alignment:
Q  107 cttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaa 200  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  5827060 cttggaaaagattttggcaagggtccattaattttgttatgtgaaacattcaagtaatgcaaacttgaagatagattccaaaaccatttaggaa 5826967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 5755577 - 5755465
Alignment:
Q  106 acttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaa 205  Q
    |||||| || |||||||||||||||||||| ||||||||||| |||| || |||||||| |||||| ||||| | ||||| |||||||||||||| ||||    
T  5755577 acttggtaaggattttggcaagggtccattgagtttgttatgggaaaaatccaagtatttcaaacttgaagataaattcccaaaccatttaggaaatgaa 5755478  T
Q  206 tctgaaataccac 218  Q
    |||||||||||||    
T  5755477 tctgaaataccac 5755465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 5761055 - 5760943
Alignment:
Q  106 acttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaa 205  Q
    |||||| || |||||||||||||||||||| ||||||||||| |||| || |||||||| |||||| ||||| | ||||| |||||||||||||| ||||    
T  5761055 acttggtaaggattttggcaagggtccattgagtttgttatgggaaaaatccaagtatttcaaacttgaagataaattcccaaaccatttaggaaatgaa 5760956  T
Q  206 tctgaaataccac 218  Q
    |||||||||||||    
T  5760955 tctgaaataccac 5760943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 5852872 - 5852757
Alignment:
Q  116 gattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatctgaaatac 215  Q
    |||||||||||   ||| |||||| ||||||||||||||||||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||||||    
T  5852872 gattttggcaacattcctttaagtatgttatgtgaaacattcaagtatcgcaaactcaaagatagcttccaaaaccatttaggaaatgaatctgaaatac 5852773  T
Q  216 cactatttgagatgtc 231  Q
     |||||  ||||||||    
T  5852772 tactatgagagatgtc 5852757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 1605632 - 1605579
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1605632 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 1605579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 7761354 - 7761301
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7761354 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 7761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 29260245 - 29260192
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29260245 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 29260192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 4129487 - 4129432
Alignment:
Q  35 ttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaatt 90  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  4129487 ttggttactgcaatttctccaaagtggatatgtattttgaaacggagggagtaatt 4129432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 8626535 - 8626481
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 88  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  8626535 cttggttaatgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 8626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 15064918 - 15064971
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  15064918 cttggttgctgcaatttctctaaaatggacatgtattttgaaacggagggagta 15064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 17942496 - 17942443
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  17942496 cttggttactgcaatttctcaaaaatggacatgtattttgaaacgaagggagta 17942443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 30734707 - 30734753
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacgga 80  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  30734707 cttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 13757261 - 13757208
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  13757261 cttggttagtgtaatttctccaaaatggacatgtattttgaaacggagagagta 13757208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 30734836 - 30734879
Alignment:
Q  38 gttactgcaatttctccaaaatggacatgtattttgaaacggag 81  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  30734836 gttactgcaatttcttcaaaatggacatgtattttgaaacggag 30734879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 19996363 - 19996322
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggagggagta 19996322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 8235677 - 8235624
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||  |||||||||    
T  8235677 cttggttactgcaatttcttcaaaatgtacatgtattttaaaatagagggagta 8235624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 31559961 - 31559998
Alignment:
Q  35 ttggttactgcaatttctccaaaatggacatgtatttt 72  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  31559961 ttggttaatgcaatttctccaaaatggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 15064733 - 15064695
Alignment:
Q  49 ttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  15064733 ttctccaaaatggacaagtattatgaaacggagggagta 15064695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 17942682 - 17942720
Alignment:
Q  49 ttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  17942682 ttctccaaaatggacaagtattatgaaacggagggagta 17942720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 89
Target Start/End: Original strand, 25476042 - 25476072
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaat 89  Q
    |||||||||||||||||||||||||||||||    
T  25476042 tggacatgtattttgaaacggagggagtaat 25476072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 22055006 - 22055035
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaa 88  Q
    ||||||||||||||||||||||||||||||    
T  22055006 tggacatgtattttgaaacggagggagtaa 22055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 4147959 - 4147931
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  4147959 tggacatgtattttgaaacggagggagta 4147931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 18668716 - 18668688
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  18668716 tggacatgtattttgaaacggagggagta 18668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 18668922 - 18668950
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  18668922 tggacatgtattttgaaacggagggagta 18668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 19087986 - 19087958
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  19087986 tggacatgtattttgaaacggagggagta 19087958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 19088192 - 19088220
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  19088192 tggacatgtattttgaaacggagggagta 19088220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 20437045 - 20437017
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  20437045 tggacatgtattttgaaacggagggagta 20437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 24623969 - 24623941
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  24623969 tggacatgtattttgaaacggagggagta 24623941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 32414913 - 32414941
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  32414913 tggacatgtattttgaaacggagggagta 32414941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 32420754 - 32420782
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  32420754 tggacatgtattttgaaacggagggagta 32420782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 32671844 - 32671816
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  32671844 tggacatgtattttgaaacggagggagta 32671816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 23553 - 23467
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23553 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 23872 - 23915
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||||||| |||||||||||||||||||||||||| ||||||||    
T  23872 aatttctctaaaatggacatgtattttgaaacggatggagtaat 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 9e-42; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41307928 - 41308014
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41307928 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 41308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 45278668 - 45278756
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45278668 ataataggaacttttgtgtcaaattagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 45278756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8697865 - 8697951
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8697865 ataataggaacttttgtgtcaaactagtttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 8697951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10646678 - 10646592
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10646678 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggaggaagta 10646592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40486420 - 40486507
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 88  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40486420 ataataggaacttttgtgtcaaattagcttgtccttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 40486507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 27035050 - 27034995
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27035050 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 27034995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 43275621 - 43275675
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 88  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43275621 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 43275675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 3585504 - 3585451
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3585504 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 40918953 - 40919006
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40918953 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 40919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 40058527 - 40058590
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaattattattt 97  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  40058527 cttggttagtgcaatttctccgaaatggacatgtattttgaaacggagggagtattttttattt 40058590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 2540155 - 2540208
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  2540155 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggaggaagta 2540208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 7146966 - 7146913
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  7146966 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggaaggagta 7146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 11174447 - 11174500
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  11174447 cttggttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 11174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 11646549 - 11646602
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  11646549 cttggttagtgcaatttctccaaaatggacatgtattttgaaacgaagggagta 11646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 36068132 - 36068071
Alignment:
Q  35 ttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaattattatt 96  Q
    ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  36068132 ttggttagtacaattcctccaaaatggacatgtattttgaaacggagggagtaatttttatt 36068071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 37345624 - 37345570
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 88  Q
    |||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  37345624 cttggttggtgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 37345570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 30999745 - 30999791
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacgga 80  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  30999745 cttggttagtgcaatttctccaaaattgacatgtattttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 20546520 - 20546567
Alignment:
Q  43 tgcaatttctccaaaatggacatgtattttgaaacggagggagtaatt 90  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||    
T  20546520 tgcaatttcttcaaaatggacatatattttgaaatggagggagtaatt 20546567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 41305803 - 41305757
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagtaattat 92  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggagagagtatttat 41305757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 10647268 - 10647306
Alignment:
Q  56 aaatggacatgtattttgaaacggagggagtaattatta 94  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  10647268 aaatggacatgtattttgaaacggaggaagtagttatta 10647306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 132045 - 132016
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaa 88  Q
    ||||||||||||||||||||||||||||||    
T  132045 tggacatgtattttgaaacggagggagtaa 132016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 28562462 - 28562421
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||    
T  28562462 aatttcttcaaaatggacaagtattttgaaacggaggaagta 28562421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 28567960 - 28567919
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||    
T  28567960 aatttcttcaaaatggacaagtattttgaaacggaggaagta 28567919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 28575553 - 28575512
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||    
T  28575553 aatttcttcaaaatggacaagtattttgaaacggaggaagta 28575512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 45278053 - 45278013
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  45278053 aatttctctaaaatggacatgtattttgaaac-gagggagta 45278013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 616811 - 616783
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  616811 tggacatgtattttgaaacggagggagta 616783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 617017 - 617045
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  617017 tggacatgtattttgaaacggagggagta 617045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 623204 - 623176
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  623204 tggacatgtattttgaaacggagggagta 623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 623410 - 623438
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  623410 tggacatgtattttgaaacggagggagta 623438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 5878349 - 5878317
Alignment:
Q  55 aaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||| |||||||||||||||    
T  5878349 aaaatggacatgtatttggaaacggagggagta 5878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 14237514 - 14237542
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  14237514 tggacatgtattttgaaacggagggagta 14237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 40494618 - 40494646
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  40494618 tggacatgtattttgaaacggagggagta 40494646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 40918769 - 40918729
Alignment:
Q  49 ttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  40918769 ttctctaaaatggacaagtattatgaaacggagggagtaat 40918729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 42587482 - 42587510
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  42587482 tggacatgtattttgaaacggagggagta 42587510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 9e-42; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25060100 - 25060186
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25060100 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 25060186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2911515 - 2911601
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2911515 ataataggaacttttgtgtcaaattagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaatggagggagta 2911601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 10981561 - 10981508
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10981561 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 10981508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 27813864 - 27813811
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27813864 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 27813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 47110504 - 47110448
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaatt 90  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  47110504 cttggttagtgcaatttctccaaaatggacatgtattttgaaatggagggagtaatt 47110448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 25614576 - 25614631
Alignment:
Q  35 ttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaatt 90  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  25614576 ttggttagtgcaatttctccaaaatggacatgtattttgaaacggaaggagtaatt 25614631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 36453348 - 36453399
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 85  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36453348 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 36453399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 40349013 - 40348960
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  40349013 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggaaggagta 40348960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 25059491 - 25059456
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggag 81  Q
    |||||||| |||||||||||||||||||||||||||    
T  25059491 aatttctctaaaatggacatgtattttgaaacggag 25059456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 89
Target Start/End: Complemental strand, 47156055 - 47156025
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaat 89  Q
    |||||||||||||||||||||||||||||||    
T  47156055 tggacatgtattttgaaacggagggagtaat 47156025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 2910900 - 2910859
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||  ||||| |||||||||||||||||||||||||||    
T  2910900 aatttctttaaaatagacatgtattttgaaacggagggagta 2910859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 36623336 - 36623307
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaa 88  Q
    ||||||||||||||||||||||||||||||    
T  36623336 tggacatgtattttgaaacggagggagtaa 36623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 16778533 - 16778505
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  16778533 tggacatgtattttgaaacggagggagta 16778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 20885131 - 20885103
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  20885131 tggacatgtattttgaaacggagggagta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 25566576 - 25566548
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  25566576 tggacatgtattttgaaacggagggagta 25566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 28061543 - 28061515
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  28061543 tggacatgtattttgaaacggagggagta 28061515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 28061749 - 28061777
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  28061749 tggacatgtattttgaaacggagggagta 28061777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 36623542 - 36623570
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  36623542 tggacatgtattttgaaacggagggagta 36623570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 38852081 - 38852109
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  38852081 tggacatgtattttgaaacggagggagta 38852109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 41898016 - 41897988
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  41898016 tggacatgtattttgaaacggagggagta 41897988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 41898222 - 41898250
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  41898222 tggacatgtattttgaaacggagggagta 41898250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 42877414 - 42877386
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  42877414 tggacatgtattttgaaacggagggagta 42877386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 46103398 - 46103370
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  46103398 tggacatgtattttgaaacggagggagta 46103370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 46103597 - 46103625
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  46103597 tggacatgtattttgaaacggagggagta 46103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 47156261 - 47156289
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  47156261 tggacatgtattttgaaacggagggagta 47156289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 9e-42; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12094668 - 12094582
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12094668 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 12094582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44277422 - 44277508
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44277422 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 44277508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19911595 - 19911503
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaattatt 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  19911595 ataataggaacttttgtgtcaaactaacttgtccttggttactgcaatttctccaaaatgaacatgtattttgaaacggagggagtaaatatt 19911503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38805331 - 38805245
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  38805331 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctctaaaatggacatgtattttaaaacggagggagta 38805245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4226791 - 4226716
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacg 78  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  4226791 ataataggaacttt-gtgtcaaactagtttgtccttggttactgcaatttctccaaaa-cgacatgtattttgaaacg 4226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 29375191 - 29375138
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29375191 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 29375138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 36881335 - 36881275
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaattatta 94  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36881335 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaaatatta 36881275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4235835 - 4235751
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| || |||||    
T  4235835 ataataggaacttt-gtatcaaactagcttgtccttggttagtgcaatttctccaaaa-cgacatgtattttgaaacgaagtgagta 4235751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 27707388 - 27707446
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaattat 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  27707388 cttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggagtagttat 27707446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 198908 - 198853
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  198908 cttggtcagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 198853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 3383129 - 3383076
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  3383129 cttggttactgcaatttctccaaaatggacatatattttgaaacggaaggagta 3383076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 13364896 - 13364843
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  13364896 cttggttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 13364843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 19241892 - 19241945
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  19241892 cttggttagtgcaatttcaccaaaatggacatgtattttgaaacggagggagta 19241945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 43750190 - 43750137
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  43750190 cttggttactccaatttctccaaaatggacatgtattttgaaacgaagggagta 43750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 46694334 - 46694389
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  46694334 cttgattagtgcaatttctccaaaaaggacatgtattttgaaacggagggagtaat 46694389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 32835180 - 32835226
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacgga 80  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  32835180 cttggttattgcaatttctccaaaatggacatgtattttgaaacgga 32835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40931708 - 40931622
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||| || ||||||||| |||||||| || ||||| |  ||||| |||||||||||| ||||||| ||||||    
T  40931708 ataataggaacttttgtgttaatctagcttgtgcttggttaatgtaatttttttaaaatagacatgtattttaaaacggatggagta 40931622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 19912174 - 19912215
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggagggagta 19912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 38806341 - 38806382
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggagggagta 38806382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 23088155 - 23088215
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaattatta 94  Q
    |||||||| |||||||||| |||||| ||||| ||||||||||| |||||||||| |||||    
T  23088155 cttggttagtgcaatttcttcaaaatagacatatattttgaaacagagggagtaactatta 23088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 44276816 - 44276773
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggagagagtaat 44276773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 48963199 - 48963156
Alignment:
Q  44 gcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  48963199 gcaatttctccaaaatagatatgtattttgaaacggagggagta 48963156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 12095423 - 12095464
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  12095423 aatttctctaaaatggacatatattttgaaacggagggagta 12095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 13499569 - 13499602
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaattat 92  Q
    ||||||||||||||||||||||||||||||||||    
T  13499569 tggacatgtattttgaaacggagggagtaattat 13499602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 13702822 - 13702769
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||| | |||||||||| ||| ||| ||||||    
T  13702822 cttggttactgcaatttctccaaaataggcatgtattttaaaatggatggagta 13702769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 90
Target Start/End: Original strand, 42761717 - 42761748
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaatt 90  Q
    ||||||||||||||||||||||||||||||||    
T  42761717 tggacatgtattttgaaacggagggagtaatt 42761748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 89
Target Start/End: Complemental strand, 19823928 - 19823898
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaat 89  Q
    |||||||||||||||||||||||||||||||    
T  19823928 tggacatgtattttgaaacggagggagtaat 19823898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 42761511 - 42761477
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaattatt 93  Q
    ||||||||||||||||||||||||||||| |||||    
T  42761511 tggacatgtattttgaaacggagggagtacttatt 42761477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 37293478 - 37293437
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||    
T  37293478 aatttcttcaaaatggacaagtattgtgaaacggagggagta 37293437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 6910568 - 6910596
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  6910568 tggacatgtattttgaaacggagggagta 6910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 20765430 - 20765458
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  20765430 tggacatgtattttgaaacggagggagta 20765458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 27010502 - 27010474
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  27010502 tggacatgtattttgaaacggagggagta 27010474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 27010708 - 27010736
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  27010708 tggacatgtattttgaaacggagggagta 27010736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 42490430 - 42490458
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  42490430 tggacatgtattttgaaacggagggagta 42490458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 9e-42; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34224345 - 34224431
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34224345 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 1102556 - 1102503
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1102556 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 3518961 - 3518908
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3518961 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 3518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 12969963 - 12970016
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12969963 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 12970016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 23366842 - 23366790
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagt 86  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23366842 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 37673961 - 37674014
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  37673961 cttggttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 37674014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 39938223 - 39938170
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  39938223 cttggttagtgcaatttctccaaaatggtcatgtattttgaaacggagggagta 39938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 12969778 - 12969738
Alignment:
Q  49 ttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  12969778 ttctccaaaatggacaagtattatgaaacggagggagtaat 12969738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 40756949 - 40756911
Alignment:
Q  49 ttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40756949 ttctccaaaatggacaagtattatgaaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 11841621 - 11841592
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaa 88  Q
    ||||||||||||||||||||||||||||||    
T  11841621 tggacatgtattttgaaacggagggagtaa 11841592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 44365391 - 44365420
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaa 88  Q
    ||||||||||||||||||||||||||||||    
T  44365391 tggacatgtattttgaaacggagggagtaa 44365420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 2183191 - 2183219
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  2183191 tggacatgtattttgaaacggagggagta 2183219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 5405230 - 5405258
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  5405230 tggacatgtattttgaaacggagggagta 5405258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 7608283 - 7608311
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  7608283 tggacatgtattttgaaacggagggagta 7608311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 8042256 - 8042284
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  8042256 tggacatgtattttgaaacggagggagta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 19141094 - 19141066
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  19141094 tggacatgtattttgaaacggagggagta 19141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 19141300 - 19141328
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  19141300 tggacatgtattttgaaacggagggagta 19141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 39358174 - 39358146
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  39358174 tggacatgtattttgaaacggagggagta 39358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3943146 - 3943060
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3943146 ataataggaacttttgtgtcaaattagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 3943060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13984958 - 13985044
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13984958 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggatggagta 13985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 41959164 - 41959075
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaatt 90  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41959164 ataatatgaacttttgtgtcaaactagcttgtccttggttattgcaatttctccaaaatggacatgtattttgaaacggagggagtaatt 41959075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9588756 - 9588670
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9588756 ataataggaacttttgtgtcaaaatagattgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 9588670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44228196 - 44228281
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  44228196 ataataggaacttttatgtcag-ctagcttgtccttggttacagcaatttctccaaaatggacatgtattttgaaatggaggtagta 44228281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 1168440 - 1168369
Alignment:
Q  8 gaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacgg 79  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  1168440 gaacttttgtgtcaaaatagcttgtccttggttactgcaatttcttcaaaaacgacatgtattttgaaacgg 1168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 284386 - 284331
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  284386 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 284331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 23045503 - 23045558
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23045503 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 23045558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 27211188 - 27211240
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagt 86  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27211188 cttggttattgcaatttctccaaaatggacatgtattttgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 321679 - 321625
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 88  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  321679 cttggttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagtaa 321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 24772129 - 24772183
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 88  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  24772129 cttggttagtgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 24772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 46771690 - 46771644
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacgga 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  46771690 cttggttactgcaatttctccaaaatggacatgtattttgaaacgga 46771644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 40783881 - 40783934
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  40783881 cttggttagtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 40783934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 44227889 - 44227848
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggagggagta 44227848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 47038085 - 47038127
Alignment:
Q  45 caatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  47038085 caatttctccaaaatggacatgtattttgaaacggatggagta 47038127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 3943763 - 3943804
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggagta 3943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 23526293 - 23526240
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||| |||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  23526293 cttgattactgcaatttctccaaaatgaacatgtattttgaaatggaaggagta 23526240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 41959809 - 41959850
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggagggagta 41959850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 9589631 - 9589672
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  9589631 aatttctctaaaatagacatgtattttgaaacggagggagta 9589672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 321865 - 321910
Alignment:
Q  49 ttctccaaaatggacatgtattttgaaacggagggagtaattatta 94  Q
    ||||| |||||||||| ||||| ||||||||||||||||| |||||    
T  321865 ttctctaaaatggacaagtattatgaaacggagggagtaactatta 321910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 16120674 - 16120703
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaa 88  Q
    ||||||||||||||||||||||||||||||    
T  16120674 tggacatgtattttgaaacggagggagtaa 16120703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 6402644 - 6402672
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  6402644 tggacatgtattttgaaacggagggagta 6402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 10845513 - 10845481
Alignment:
Q  55 aaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||| |||||    
T  10845513 aaaatggacatgtattttgaaacggagtgagta 10845481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 11641095 - 11641067
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  11641095 tggacatgtattttgaaacggagggagta 11641067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 13984468 - 13984436
Alignment:
Q  56 aaatggacatgtattttgaaacggagggagtaa 88  Q
    ||||||| |||||||||||||||||||||||||    
T  13984468 aaatggatatgtattttgaaacggagggagtaa 13984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 30701746 - 30701718
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  30701746 tggacatgtattttgaaacggagggagta 30701718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 36399332 - 36399360
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  36399332 tggacatgtattttgaaacggagggagta 36399360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 36757514 - 36757486
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  36757514 tggacatgtattttgaaacggagggagta 36757486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 40771800 - 40771772
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  40771800 tggacatgtattttgaaacggagggagta 40771772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 40772006 - 40772034
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  40772006 tggacatgtattttgaaacggagggagta 40772034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 52024260 - 52024288
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  52024260 tggacatgtattttgaaacggagggagta 52024288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 81; Significance: 3e-38; HSPs: 10)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 34009 - 33885
Alignment:
Q  107 cttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaat 206  Q
    |||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| |||||    
T  34009 cttgtaaatgattttggcaaggttcctttaagtatgttatgtgaaacattcaagtatcgcaaactcaaagatagattccaaaaccatttaggaaatgaat 33910  T
Q  207 ctgaaataccactatttgagatgtc 231  Q
    ||||||||||| |||  ||||||||    
T  33909 ctgaaataccattatgagagatgtc 33885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 12621 - 12509
Alignment:
Q  106 acttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaa 205  Q
    |||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||| | |||||| ||||||||||||| ||||    
T  12621 acttggtaaggattttggcaagggtccattgagtttgttatgggaaacattcaagtatctcaaactcgaagataaattccagaaccatttaggaaatgaa 12522  T
Q  206 tctgaaataccac 218  Q
    |||||||||||||    
T  12521 tctgaaataccac 12509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 40062 - 39932
Alignment:
Q  105 tacttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactga 204  Q
    |||||||||||||  |||||||||||||||||||||||||||  || || |||||||||  |||||| ||||| ||||||||||||||||| |||| |||    
T  40062 tacttggaaatgacattggcaagggtccattaagtttgttatacgatacgttcaagtatgtcaaacttgaagatagattccaaaaccattttggaaatga 39963  T
Q  205 atctgaaataccactatttgagatgtctaga 235  Q
    |||| |||||||| |||| ||||| ||||||    
T  39962 atctaaaataccaatattagagatttctaga 39932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 55251 - 55139
Alignment:
Q  116 gattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatctgaaatac 215  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||  |||||||||||  | |||||| ||||||||||||| ||||||||||||||    
T  55251 gattttggcaagggtccattgagtttgttatgggaaacatccaagtatctcaaactcgaaggtaaattccagaaccatttaggaaatgaatctgaaatac 55152  T
Q  216 cactatttgagat 228  Q
    ||| ||| |||||    
T  55151 cacaattagagat 55139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 19645 - 19533
Alignment:
Q  116 gattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatctgaaatac 215  Q
    |||||||||||||||||||| ||||| ||||| |||| || |||||||  |||||||||||| | ||||| |||||||||||||| ||||||||||||||    
T  19645 gattttggcaagggtccattgagtttattatgggaaatatccaagtatgtcaaactcgaagataaattcccaaaccatttaggaaatgaatctgaaatac 19546  T
Q  216 cactatttgagat 228  Q
    ||| ||| |||||    
T  19545 cacaattagagat 19533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 29993 - 29881
Alignment:
Q  116 gattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaactcgaagagagattccaaaaccatttaggaactgaatctgaaatac 215  Q
    |||||||||||||||||||| ||||| ||||| |||| || |||||||  |||||||||||| | ||||| |||||||||||||| ||||||||||||||    
T  29993 gattttggcaagggtccattgagtttattatgggaaatatccaagtatgtcaaactcgaagataaattcccaaaccatttaggaaatgaatctgaaatac 29894  T
Q  216 cactatttgagat 228  Q
    ||| ||| |||||    
T  29893 cacaattagagat 29881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 924 - 821
Alignment:
Q  96 ttactttattacttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaac-tcgaagagagattccaaaaccatt 194  Q
    |||||||  |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||| | ||||| | ||||||||| ||||    
T  924 ttacttttgtacttggaaatgatttcggcaagggaccattgagtttgttatgtgaaacattcaagtattccaaactttgaagataaattccaaaatcatt 825  T
Q  195 tagg 198  Q
    ||||    
T  824 tagg 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 15813 - 15710
Alignment:
Q  96 ttactttattacttggaaatgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaac-tcgaagagagattccaaaaccatt 194  Q
    |||||||  |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||| | ||||| | ||||||||| ||||    
T  15813 ttacttttgtacttggaaatgatttcggcaagggaccattgagtttgttatgtgaaacattcaagtattccaaactttgaagataaattccaaaatcatt 15714  T
Q  195 tagg 198  Q
    ||||    
T  15713 tagg 15710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 5630 - 5511
Alignment:
Q  96 ttactttattacttggaaa-tgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaac-tcgaagagagattccaaaaccat 193  Q
    |||||||  |||||||||| |||||| |||||||| ||||| |||||||||||||||||| ||||||||| ||||| | ||||| | ||||||||| |||    
T  5630 ttacttttgtacttggaaaatgatttcggcaagggaccattgagtttgttatgtgaaacaatcaagtattccaaactttgaagataaattccaaaatcat 5531  T
Q  194 ttaggaactgaatctgaaat 213  Q
    || || | ||||||| ||||    
T  5530 ttggggaatgaatctaaaat 5511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 22745 - 22626
Alignment:
Q  96 ttactttattacttggaaa-tgattttggcaagggtccattaagtttgttatgtgaaacattcaagtattgcaaac-tcgaagagagattccaaaaccat 193  Q
    |||||||  |||||||||| |||||| |||||||| ||||| |||||||||||||||||| ||||||||| ||||| | ||||| | ||||||||| |||    
T  22745 ttacttttgtacttggaaaatgatttcggcaagggaccattgagtttgttatgtgaaacaatcaagtattccaaactttgaagataaattccaaaatcat 22646  T
Q  194 ttaggaactgaatctgaaat 213  Q
    || || | ||||||| ||||    
T  22645 tttgggaatgaatctaaaat 22626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19361733 - 19361662
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtatttt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19361733 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtatttt 19361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 40122710 - 40122762
Alignment:
Q  35 ttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40122710 ttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 40122762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 14261097 - 14261044
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14261097 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 14261044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 21310478 - 21310425
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21310478 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 21310425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 21661759 - 21661812
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21661759 cttggttactgcaatttctccaaaatggacatgtattttgaaagggagggagta 21661812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 21670523 - 21670576
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21670523 cttggttactgcaatttctccaaaatggacatgtattttgaaagggagggagta 21670576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 25704704 - 25704651
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25704704 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 25704651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 34324807 - 34324860
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34324807 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 12071613 - 12071561
Alignment:
Q  35 ttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12071613 ttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 12071561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 22321491 - 22321544
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  22321491 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggaaggagta 22321544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 24706471 - 24706524
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  24706471 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggatggagta 24706524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 20541547 - 20541476
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtatttt 72  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| |   |||||||||||    
T  20541547 ataataggaacttttgtgtcgaactagtttgtccttggttaatgcaatttctccaatagcaacatgtatttt 20541476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 44568889 - 44568837
Alignment:
Q  35 ttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  44568889 ttggttagtgcaatttcttcaaaatggacatgtattttgaaacggaaggagta 44568837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 20249236 - 20249291
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||||||| | |||||| |||||||||||||||||||||||||||||| |||||||    
T  20249236 cttggttaatacaatttatccaaaatggacatgtattttgaaacggagagagtaat 20249291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 31892291 - 31892240
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 85  Q
    |||||||||||||||||||  |||||| ||||||||||||| ||||||||||    
T  31892291 cttggttactgcaatttctttaaaatgaacatgtattttgatacggagggag 31892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 2760758 - 2760727
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaatt 90  Q
    ||||||||||||||||||||||||||||||||    
T  2760758 tggacatgtattttgaaacggagggagtaatt 2760727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 55209602 - 55209571
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaatt 90  Q
    ||||||||||||||||||||||||||||||||    
T  55209602 tggacatgtattttgaaacggagggagtaatt 55209571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 89
Target Start/End: Original strand, 2760961 - 2760991
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaat 89  Q
    |||||||||||||||||||||||||||||||    
T  2760961 tggacatgtattttgaaacggagggagtaat 2760991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 12071799 - 12071841
Alignment:
Q  49 ttctccaaaatggacatgtattttgaaacggagggagtaatta 91  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||    
T  12071799 ttctctaaaatggacaagtattatgaaacggagggagtaatta 12071841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 19362189 - 19362223
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacgga 80  Q
    |||||||| ||||||||||||||||||||||||||    
T  19362189 aatttctctaaaatggacatgtattttgaaacgga 19362223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 89
Target Start/End: Complemental strand, 19433386 - 19433356
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaat 89  Q
    |||||||||||||||||||||||||||||||    
T  19433386 tggacatgtattttgaaacggagggagtaat 19433356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 89
Target Start/End: Original strand, 55209808 - 55209838
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaat 89  Q
    |||||||||||||||||||||||||||||||    
T  55209808 tggacatgtattttgaaacggagggagtaat 55209838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 4467548 - 4467520
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  4467548 tggacatgtattttgaaacggagggagta 4467520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 26170014 - 26169986
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  26170014 tggacatgtattttgaaacggagggagta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 26170221 - 26170249
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  26170221 tggacatgtattttgaaacggagggagta 26170249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 29830371 - 29830343
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  29830371 tggacatgtattttgaaacggagggagta 29830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 35381128 - 35381156
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  35381128 tggacatgtattttgaaacggagggagta 35381156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 38416678 - 38416650
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  38416678 tggacatgtattttgaaacggagggagta 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 38416884 - 38416912
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  38416884 tggacatgtattttgaaacggagggagta 38416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 44232105 - 44232077
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  44232105 tggacatgtattttgaaacggagggagta 44232077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 45292066 - 45292094
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  45292066 tggacatgtattttgaaacggagggagta 45292094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 47386520 - 47386548
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  47386520 tggacatgtattttgaaacggagggagta 47386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15305182 - 15305265
Alignment:
Q  1 ataataggaacttttgtgtcaaactagcttgtccttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    ||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15305182 ataataggaacttttgtgtcaaacttgcttgtca---gttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 15305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 30720716 - 30720771
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30720716 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 30720771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 12807077 - 12807130
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12807077 cttggttaatgcaatttctccaaaatggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 16983311 - 16983258
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16983311 cttggttactgcaatttctccaaaatggacatgtattttgaaacagagggagta 16983258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 25773702 - 25773649
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25773702 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 37900848 - 37900901
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  37900848 cttggttactgcaatttctccaaaatggatgtgtattttgaaacggagggagta 37900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 10285281 - 10285334
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||    
T  10285281 cttggttaatgcaatttctccaaaatagacatctattttgaaacggagggagta 10285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 40886834 - 40886887
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  40886834 cttggttagtgcaatttctccaaaatgaacatgtattttgaaacggatggagta 40886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 36561323 - 36561378
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    |||| |||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  36561323 cttgattactgcaatttttctaaaatggacatgtattttgaaacggatggagtaat 36561378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 7277647 - 7277688
Alignment:
Q  35 ttggttactgcaatttctccaaaatggacatgtattttgaaa 76  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  7277647 ttggttactccaatttctccaaaatagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 15304863 - 15304822
Alignment:
Q  46 aatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  15304863 aatttctctaaaatggacatgtattttaaaacggagggagta 15304822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 25683267 - 25683224
Alignment:
Q  49 ttctccaaaatggacatgtattttgaaacggagggagtaattat 92  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||    
T  25683267 ttctccaaaatggacaagtattatgaaacggagggagtagttat 25683224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 89
Target Start/End: Original strand, 33387453 - 33387483
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaat 89  Q
    |||||||||||||||||||||||||||||||    
T  33387453 tggacatgtattttgaaacggagggagtaat 33387483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 978311 - 978340
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaa 88  Q
    ||||||||||||||||||||||||||||||    
T  978311 tggacatgtattttgaaacggagggagtaa 978340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 24992374 - 24992403
Alignment:
Q  61 gacatgtattttgaaacggagggagtaatt 90  Q
    ||||||||||||||||||||||||||||||    
T  24992374 gacatgtattttgaaacggagggagtaatt 24992403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 978105 - 978077
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  978105 tggacatgtattttgaaacggagggagta 978077  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 8086264 - 8086292
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  8086264 tggacatgtattttgaaacggagggagta 8086292  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 9502655 - 9502627
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  9502655 tggacatgtattttgaaacggagggagta 9502627  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 14634185 - 14634157
Alignment:
Q  59 tggacatgtattttgaaacggagggagta 87  Q
    |||||||||||||||||||||||||||||    
T  14634185 tggacatgtattttgaaacggagggagta 14634157  T

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Target: scaffold1770 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 222 - 167
Alignment:
Q  35 ttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaatt 90  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  222 ttggttactgcaatttctccaaagtggatatgtattttgaaacggagggagtaatt 167  T

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Target: scaffold1431 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 123 - 176
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  123 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagagagta 176  T

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Target: scaffold0127 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 210
Target Start/End: Original strand, 16563 - 16673
Alignment:
Q  105 tacttggaaatgattttggcaagggtccattaagtttgt----tatgtgaaacattcaagtattgcaaactcgaagagag-attccaaaaccatttagga 199  Q
    |||||| ||||||||||||||| |||||||||| ||| |    |||| |||||| |||||  ||||||||||||||| ||  ||||||||||||||||||    
T  16563 tacttgtaaatgattttggcaatggtccattaaattttttatatatgcgaaacactcaagatttgcaaactcgaagatagctttccaaaaccatttagga 16662  T
Q  200 actgaatctga 210  Q
    | |||||||||    
T  16663 aatgaatctga 16673  T

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Target: scaffold0054 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 45507 - 45454
Alignment:
Q  34 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 87  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  45507 cttggttggtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 45454  T

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Target: scaffold0054; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 45692 - 45732
Alignment:
Q  49 ttctccaaaatggacatgtattttgaaacggagggagtaat 89  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  45692 ttctctaaaatggacaagtattatgaaacggagggagtaat 45732  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 100675 - 100644
Alignment:
Q  59 tggacatgtattttgaaacggagggagtaatt 90  Q
    ||||||||||||||||||||||||||||||||    
T  100675 tggacatgtattttgaaacggagggagtaatt 100644  T

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