View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11567_low_15 (Length: 261)
Name: NF11567_low_15
Description: NF11567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11567_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 31 - 247
Target Start/End: Complemental strand, 40453217 - 40453001
Alignment:
| Q |
31 |
aaggatggttgatactagtgaatgcttttaaacttcaattcctttgggattttctgtaaagagtgcttgaaatggagagaaagaaaacagaaagagatag |
130 |
Q |
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| T |
40453217 |
aaggatggttgatactagtgaatgcttttaaacttcaattcctttgggattttctgtaaagagtgcttgaaatggagagaaagaaaacagaaagagatag |
40453118 |
T |
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| Q |
131 |
gtatggaagtggaaaattcagaattcagtttagattctttgtttaagtagagtttaattggcatatgtactaaggcaagtgtaaattagttttacactta |
230 |
Q |
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| T |
40453117 |
gtatggaagtggaaaattcagaattcagtttagattctttgtttaagtagagtttaattggcatatgtactaaggcaagtgtaaattagttttacactta |
40453018 |
T |
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| Q |
231 |
cattttgatcccacttt |
247 |
Q |
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||||||||||||||||| |
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| T |
40453017 |
cattttgatcccacttt |
40453001 |
T |
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