View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11569_high_8 (Length: 251)
Name: NF11569_high_8
Description: NF11569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11569_high_8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 29671854 - 29672093
Alignment:
| Q |
12 |
cacagatgaaaacagaaacactctggtgcatcaatccaaatcatctcagaagaatcttcagcattctttgataaaaccccgaacctcgagactttctcct |
111 |
Q |
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| T |
29671854 |
cacagatgaaaacagaaacactctggtgcatcaatccaaatcatctcagaagaatcttcagcattcttggataaaaccccgaacctcgagactttctcct |
29671953 |
T |
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| Q |
112 |
tatcgtaaacaacaggcgacccaccacggatcatttcacccaatttaaacacaacttgttgatcaggcacaacaacgaaattctcagtgatcgcgaagtc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29671954 |
tatcgtaaacaacaggcgacccaccacggatcatttcacccaatttaaacacaacttgttgatcaggcacaacaacgaaattctcagtgatcgcgaagtc |
29672053 |
T |
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| Q |
212 |
atgcatcatagtaggctgctccaacggaatctcaacgtcc |
251 |
Q |
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| T |
29672054 |
atgcatcatagtaggctgctccaacggaatctcaacgtcc |
29672093 |
T |
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