View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1156_low_9 (Length: 339)
Name: NF1156_low_9
Description: NF1156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1156_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 84 - 275
Target Start/End: Complemental strand, 47518332 - 47518140
Alignment:
| Q |
84 |
attgagttaggcttaagcttaaata-taagaaatacatttgtacttgattccctctatgtatattgttttgtaaaacattatgcgtaaaggttgtataat |
182 |
Q |
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| T |
47518332 |
attgagttaggcttaagcttaaatactaagaaatacatttgtacttgattctctctatgtatattgttttgtaaaacattatgcggaaaggttgtataat |
47518233 |
T |
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| Q |
183 |
gtttctgcattatgtgaaactctcaagtccaggttcacccgcatgatgtgcttgtcaaagtcttatgttaacatacccaaataatggtctgtg |
275 |
Q |
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| T |
47518232 |
gtttctgcattatgtgaaactctcaagtccaggttcacccgcatgatgtgcttgtcaaagtcttatgttaacatacccaaataatggtctgtg |
47518140 |
T |
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