View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11571_high_15 (Length: 490)
Name: NF11571_high_15
Description: NF11571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11571_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 277 - 473
Target Start/End: Complemental strand, 11038953 - 11038757
Alignment:
| Q |
277 |
tcttttcactaattctcaattaggagtgcttgtataaccatttattcatttgtttagtgaagaactgaagatagtggaagcagtacctttcatgctctaa |
376 |
Q |
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| T |
11038953 |
tcttttcactaattctcaattaggagtgcttgtataaccatttattcatttgtttagtgaagaactggagatagtggaagcagtacctatcatgctctaa |
11038854 |
T |
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| Q |
377 |
atcctttagagttaagcacattcgagttagtgttccctcatgtaattgaagaacaaactatttactactaatcaagaatacatctaatgtatgcttt |
473 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11038853 |
atcctttaaagttaagcacattcgagttagtgttccctcatgtaattgaagaacaaactatttactactaatcaagaatacatctaatgtatgcttt |
11038757 |
T |
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