View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11571_high_36 (Length: 345)
Name: NF11571_high_36
Description: NF11571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11571_high_36 |
 | |
|
| [»] chr3 (32 HSPs) |
| |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] chr7 (1 HSPs) |
| |
|
| [»] scaffold0002 (3 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 304; Significance: 1e-171; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 14 - 345
Target Start/End: Original strand, 10582049 - 10582380
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
10582049 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcaagaacgtggataatgttgttgatgccaaagaggcacatgatgccagcttgaaaagc |
10582148 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10582149 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcataaagtgaaagttgtgcttgatatgttgcaaccagcaataaatt |
10582248 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10582249 |
tgaagagcctgaatatttgcttatatggcgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
10582348 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccaccaatagggc |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
10582349 |
tgaatattgtgtgacacttccaccaatagggc |
10582380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 14 - 337
Target Start/End: Complemental strand, 10362428 - 10362108
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10362428 |
agagctaaggaaattcccaaacctacaaggaaaacttaccatcaagaacctagataatgttgttgatgccaaagaggcacatgatgccaacttgaaaagc |
10362329 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10362328 |
aaagagaaaattcaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgcttgatatgttgcaaccaccaataaatt |
10362229 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10362228 |
tgaagagcctgaatatttgc---catggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
10362132 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccacc |
337 |
Q |
| |
|
|||||||||||||| ||||||||| |
|
|
| T |
10362131 |
tgaatattgtgtgatacttccacc |
10362108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 14 - 345
Target Start/End: Original strand, 10033439 - 10033770
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| |
|
|
| T |
10033439 |
agagctaaggaaattcccaaacctacaaggaaaacttaccatcaagaacctggataatgttgttgatgccagagaggcacacgatgcaaacctgaaaagc |
10033538 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||| |
|
|
| T |
10033539 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctcgatattttgcaaccaccaataaatc |
10033638 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
| ||||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| || |||||||||||||| |
|
|
| T |
10033639 |
taaagagcctgaatatttgtttgtatggtgggacaagctttccgagttggttgggaaattctttgttttctaacatggtatctcttcgcatcactaattg |
10033738 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccaccaatagggc |
345 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||| |
|
|
| T |
10033739 |
tgaatattgtatgacacttccacccatagggc |
10033770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 14 - 345
Target Start/End: Original strand, 10262137 - 10262468
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| |
|
|
| T |
10262137 |
agagctaaggaaattcccaaacctacaaggaaaacttaccatcaagaacctggataatgttgttgatgccagagaggcacacgatgcaaacctgaaaagc |
10262236 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
10262237 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctcgatatgttgcaaccaccaataaatc |
10262336 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
| ||||||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||| || |||||||||||||| |
|
|
| T |
10262337 |
taaagagcctgaaaatttgtttgtatggtgggacaagctttccgagttggttgggaaattcttcgttttataacatggtatctctgcgcatcactaattg |
10262436 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccaccaatagggc |
345 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||| |
|
|
| T |
10262437 |
tgaatattgtatgacacttccacccatagggc |
10262468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 345
Target Start/End: Original strand, 10128364 - 10128695
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| || |
|
|
| T |
10128364 |
agagctaaggaaattcccaaacctacaaggaaaacttaccatcaagaacctggataatgttgttgatgccagagaggcacacgatgcaaacctgaaaggc |
10128463 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
10128464 |
aaagagaaaattgaggagttagaactgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctcgatatgttgcaaccaccaataaatc |
10128563 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
| ||||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| || |||||||||||||| |
|
|
| T |
10128564 |
taaagagcctgaatatttgtttgtatggtgggacaagctttccgagttggttgggaaattctttgttttctaacatggtatctctgcgcatcactaattg |
10128663 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccaccaatagggc |
345 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||| |
|
|
| T |
10128664 |
tgaatattgtatgacacttccacccatagggc |
10128695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 14 - 337
Target Start/End: Original strand, 10664965 - 10665288
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10664965 |
agagctaaggaaattcccaaacctacagggaaaacttaccatcaagaacctggataatgttgttgatgccagagaggcacacgatgccaacttgaaaagc |
10665064 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||| ||||||||| |
|
|
| T |
10665065 |
aaagagaagattgagaagttagagctgatatggggaaaacaaagtgaagattcgcaaaaagtgaaagttgtactcgatatgttgcaaccaccaataaatt |
10665164 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |
|
|
| T |
10665165 |
tgaagagcctgaatattttcttgtatggtggaacaagctttccaagttggttgggaaattcttcgttttctaacatggtatccctctgtatcagtaattg |
10665264 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccacc |
337 |
Q |
| |
|
|||||||||||||| ||||||||| |
|
|
| T |
10665265 |
tgaatattgtgtgatacttccacc |
10665288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 343
Target Start/End: Original strand, 10090229 - 10090558
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
10090229 |
agagctaaggaaattcccaaacctacaaggaaaacttaccatcaagaacctgtataatgttgttgatgcctgggaggcacgtgatgccaacttgaaaagc |
10090328 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
10090329 |
aaagagaaaattgaggagttagagctgatatggggaaagcaaagtgaagactcgcaaaaagtgaaagttgtgctcgatatgttgcaacctccaataaatc |
10090428 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |
|
|
| T |
10090429 |
tgaagagcttgaatatttgcttgtatggtgggacaagctttccgagttggttgggaaattcttcgttttctaacatggtatccctctgtatcagtaattg |
10090528 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccaccaatagg |
343 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |
|
|
| T |
10090529 |
tgaatattgtgtgacacttccacccatagg |
10090558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 343
Target Start/End: Original strand, 10197112 - 10197441
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
10197112 |
agagctaaggaaattcccaaacctacaaggaaaacttaccatcaagaacctgtataatgttgttgatgcctgggaggcacgtgatgccaacttgaaaagc |
10197211 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
10197212 |
aaagagaaaattgaggagttagagctgatatggggaaagcaaagtgaagactcgcaaaaagtgaaagttgtgctcgatatgttgcaacctccaataaatc |
10197311 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |
|
|
| T |
10197312 |
tgaagagcttgaatatttgcttgtatggtgggacaagctttccgagttggttgggaaattcttcgttttctaacatggtatccctctgtatcagtaattg |
10197411 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccaccaatagg |
343 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |
|
|
| T |
10197412 |
tgaatattgtgtgacacttccacccatagg |
10197441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 335
Target Start/End: Complemental strand, 10374475 - 10374154
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||| ||||| || |
|
|
| T |
10374475 |
agagctaaggaaattcccaaacctacaaggaaaacttaccatcaagaacctagataatgttgttgatgccagagaggcacacgatgcaaacctgaaaggc |
10374376 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10374375 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagacttgcaaaaagtaaaagttgtgttggatatgttgcaaccagcaataaatt |
10374276 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||| ||| | |||| |||||| |
|
|
| T |
10374275 |
tgaagagcctgcatatttgcttgtatggtgggacaagctttccgagttggttgggaagttcttcgttttataacatggtatctctcagtatcagtaattg |
10374176 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttcca |
335 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
10374175 |
tgaaaattgtgtgacacttcca |
10374154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 10518924 - 10519245
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| | |||||| |
|
|
| T |
10518924 |
agagctcaggaaattcccaaacctacaaggaaaacttaccatcaagaacctggataatgtggttgatgccagagaggcacacgatgccaacctaaaaagc |
10519023 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
| ||||| ||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10519024 |
atagagacaatcgaggagttagagctgatatggggaaaacaaagtgacgactcgcaaaaagtgaaagttgtgctcgatatgttgcaaccaccaataaatt |
10519123 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||| | |||| |||||| |
|
|
| T |
10519124 |
tgaagagcctgaatatttgtttgtatggtgggacaagttttccgagttggttgggaagttcttcgttttataacatggtatctctcagtatcagtaattg |
10519223 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttcca |
335 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
10519224 |
tgaaaattgtgtgacacttcca |
10519245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 14 - 337
Target Start/End: Complemental strand, 10432674 - 10432351
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||| |
|
|
| T |
10432674 |
agagctaaggaaattcccaaacctacagggaaaacttaccatcaagaacctggataatgttgttgatgccagagaggcacacgatgccaacctaaaaagc |
10432575 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| | | |
|
|
| T |
10432574 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagactcgcacaaagtgaaagttgtgctggatatgttgcaaccaccaatgagta |
10432475 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||| ||||| ||||| |||||| ||||||||||||||||||| |||||||||||||| | |||| |||||| |
|
|
| T |
10432474 |
tgaagagcctaaatatttgcttgtatgatggtacaagctttccgagttggctgggaaattcttcgttttcggacatggtatccctctgtatcagtaattg |
10432375 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccacc |
337 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
10432374 |
tgaatattgtgtgacacttccacc |
10432351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 24 - 345
Target Start/End: Complemental strand, 11780602 - 11780281
Alignment:
| Q |
24 |
aaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagcaaagagaaaa |
123 |
Q |
| |
|
|||||| |||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
11780602 |
aaattcccaaacctacatagaacacttaccatcaagaacctggataatgttgttgatgccggagaggcacacgatgccaacctgaaaagcaaagaaaaaa |
11780503 |
T |
|
| Q |
124 |
ttgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcct |
223 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| || |||||||| |||||||||| |
|
|
| T |
11780502 |
ttgaggatttagagctaatatggggaaaacaaagtgacgagtcgcaaaaagtgaaagttgtgctcgatatgctgcagccgccaataaatctgaagagcct |
11780403 |
T |
|
| Q |
224 |
gaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgt |
323 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||| |||||| |||||||| |||| ||||| ||||||||||||||||| || | |||||||||||||||| |
|
|
| T |
11780402 |
gaatatttgcttgtatggtgggacaagctttccaagttggctgggaaatccttcattttcaaacatggtatccctccgtattagtaattgtgaatattgt |
11780303 |
T |
|
| Q |
324 |
gtgacacttccaccaatagggc |
345 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
11780302 |
gtgacacttccacccatagggc |
11780281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 345
Target Start/End: Original strand, 11770673 - 11771004
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
||||||| | ||| || |||||||||| ||| |||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||| |
|
|
| T |
11770673 |
agagctcggaaaactcccaaacctacatagaacacttaccatcaagaacctggataatgtttttgattccgtagaggcacacgatgccaacttgaaaagc |
11770772 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||| |||| || |||||||| |
|
|
| T |
11770773 |
aaagaaaaaattgaggatttagagctaatatggggaaaacaaagtgacgagtcgcaaaaagtgaaagatgtgctcgatatgctgcagccgccaataaatc |
11770872 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||||||| || | |||||| |
|
|
| T |
11770873 |
tgaagagcctgaatatttgcttgtatggtgggacaagctttccgagttggctgggaaattcttcattttctaacatggtatccctccgtattagtaattg |
11770972 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccaccaatagggc |
345 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |
|
|
| T |
11770973 |
tgaatattgtgtgacacttccacccatagggc |
11771004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 9851178 - 9851499
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
9851178 |
agagctaaggaaattcccaaacctacacggaaaacttaccatcaagaacctggataatgttgttgatgcccgagaggcacacgatgccaacctgaaaagc |
9851277 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
9851278 |
aaagagcaaattgaggagttagagctgatatggggaaaacatagtgaagattcgcaagaagtgaaagttgtgctcgatatgttgcaaccaccaataaatc |
9851377 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
||||| || || ||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||| | |||| |||||| |
|
|
| T |
9851378 |
tgaaggtgcttaaaattgacttgtatggtgggacaagttttccgagttggttgggaagttcttcgttttataacatggtatctctcagtatcagtaattg |
9851477 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttcca |
335 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
9851478 |
tgaaaattgtgtgacacttcca |
9851499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 335
Target Start/End: Original strand, 9840300 - 9840621
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |
|
|
| T |
9840300 |
agagctcaggaaattcccaaacctacagggaaaacttaccatcaagaacctggataatgttgttgatgcccgagacgcacacgatgccaacctgaaaagc |
9840399 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
9840400 |
aaagagcaaattgaggagttagagctgatatggggaaaacatagtgaagattcgcaagaagtgaaagttgtgctcgatatgttgcaaccaccaataaatc |
9840499 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
||||| || || ||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||| ||| | |||| |||||| |
|
|
| T |
9840500 |
tgaaggtgcttaaaattgacttgtatggtgggacaagttttccgagttggttgggaagttcttcgttttataacatcgtatctctcagtatcagtaattg |
9840599 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttcca |
335 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
9840600 |
tgaaaattgtgtgacacttcca |
9840621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 58 - 338
Target Start/End: Original strand, 10078893 - 10079173
Alignment:
| Q |
58 |
agaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagcaaagagaaaattgaggagttagagctgatatggggaaaacaaag |
157 |
Q |
| |
|
||||| |||| ||| |||||||||||| ||||||| ||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
10078893 |
agaacttggaaaatattgttgatgccacagaggcatgtgatgccaaccttaaaagcaaagaccaaattgaggagttagagatgatatggggaaagcaaag |
10078992 |
T |
|
| Q |
158 |
tgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcctgaatatttgcttatatggtgggacaagttttcct |
257 |
Q |
| |
|
|||||| || |||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||| | |
|
|
| T |
10078993 |
tgaagattcacaaaaagtgaaagtattgctcgatatgttgcaaccaccaataaatttgaagagtctgaatatttgcttgtatggtgggacaagcttttcg |
10079092 |
T |
|
| Q |
258 |
agttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccacca |
338 |
Q |
| |
|
|||||||| |||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
10079093 |
agttggttaggaaattcttcgttttgtaacttggtatccctcgtaatcactgattgtgaatattgtgtgatacttccacca |
10079173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 14 - 338
Target Start/End: Original strand, 10185819 - 10186143
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| |||| |||| ||||||||| ||||||||| || ||||| |||| ||| |||||||||||| ||||||| ||||||||| | |||||| |
|
|
| T |
10185819 |
agagctaagtagattcacaaacctacggcgaaaacttattattaagaacttggaaaatattgttgatgccacagaggcatgtgatgccaaccttaaaagc |
10185918 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||| ||||||||| |
|
|
| T |
10185919 |
aaagaccaaattgaggagttagagatgatatggggaaaacaaagtgaagattcacaaaaagtgaaagtattgctagatatgttgcaaccaccaataaatt |
10186018 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||| ||| | |||||||| |||||||||||||||| |||| |||| |||||| |||||| |||| |
|
|
| T |
10186019 |
tgaagagtctgaatatttgcttgtatggtgggacaagcttttcgagttggttaggaaattcttcgttttgtaacttggtgtccctcgtaatcactgattg |
10186118 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttccacca |
338 |
Q |
| |
|
||||||||||| || |||||||||| |
|
|
| T |
10186119 |
tgaatattgtgcgatacttccacca |
10186143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 24 - 337
Target Start/End: Original strand, 10502035 - 10502348
Alignment:
| Q |
24 |
aaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagcaaagagaaaa |
123 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10502035 |
aaattctcgcacctacaaggaaaacttaccatcaagaacctaaataatgtagttgatgccacggaggcacacgatgccaacctgaaaagcaaagagaaaa |
10502134 |
T |
|
| Q |
124 |
ttgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcct |
223 |
Q |
| |
|
|||| ||||||||| || ||||||| ||||||| |||||| || ||||||| |||| ||| || || |||||||| ||| || |||| ||||||| || |
|
|
| T |
10502135 |
ttgaagagttagagttgttatggggcaaacaaattgaagactcacaaaaagagaaaaatgtacttgagatgttgcatccatcagtaaacttgaagaaact |
10502234 |
T |
|
| Q |
224 |
gaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgt |
323 |
Q |
| |
|
| || ||| ||| | |||||||| ||||| | ||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| |
|
|
| T |
10502235 |
aatcatagacttgtatagcgggacaagctttccaaattggttgggaaattcttcgttttctaacatggtatccatcaacatcactaactgtgaatattgt |
10502334 |
T |
|
| Q |
324 |
gtgacacttccacc |
337 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
10502335 |
gtgacacttccacc |
10502348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 337
Target Start/End: Original strand, 10678887 - 10679200
Alignment:
| Q |
24 |
aaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagcaaagagaaaa |
123 |
Q |
| |
|
|||||| || || |||| ||||||||||| ||| ||||||| ||||||| |||||||||| || ||| | ||||||||| || || ||||||| ||| |
|
|
| T |
10678887 |
aaattcccacacttacagggaaaacttactatcaagaaccttcataatgtcgttgatgccacggatgcaaaagatgccaacctggaagacaaagagcaaa |
10678986 |
T |
|
| Q |
124 |
ttgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcct |
223 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||| || ||||||||||||||| |||||| | ||||||| || |
|
|
| T |
10678987 |
ttgaggagttagagctgttgtggggaaaacaaagtgaagactcgcgaaaagtgaaagttgttctagatatgttgcaaccaccaataagtctgaagaggct |
10679086 |
T |
|
| Q |
224 |
gaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgt |
323 |
Q |
| |
|
|||| |||| ||||| |||||||||||||| | |||| | ||||| |||| ||| | ||||||||| || || |||||| ||||| ||||||||| |
|
|
| T |
10679087 |
tcgtattggcttgtatggcgggacaagttttccaaattgggtaggaaactctttgttctataacatggtgtctcttcgcatcgataattctgaatattgc |
10679186 |
T |
|
| Q |
324 |
gtgacacttccacc |
337 |
Q |
| |
|
||||||||||||| |
|
|
| T |
10679187 |
atgacacttccacc |
10679200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 24 - 337
Target Start/End: Original strand, 10530098 - 10530409
Alignment:
| Q |
24 |
aaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagcaaagagaaaa |
123 |
Q |
| |
|
|||||| || || |||| ||||||||||| ||| |||| ||| ||||||| |||||||||| || ||| | ||||||||| || || | |||| ||| |
|
|
| T |
10530098 |
aaattcccacacttacagggaaaacttactatcaagaaactgcataatgtcgttgatgccatggatgcaaaagatgccaacctggaa--gacagagcaaa |
10530195 |
T |
|
| Q |
124 |
ttgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcct |
223 |
Q |
| |
|
|||||||||||| ||| | ||||||||| |||||||||| |||| ||||||||||||||| || ||||||||||||||| |||||| | |||||||||| |
|
|
| T |
10530196 |
ttgaggagttaggtctgttgtggggaaaagaaagtgaagactcgcgaaaagtgaaagttgttctagatatgttgcaaccaccaataactctgaagagcct |
10530295 |
T |
|
| Q |
224 |
gaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgt |
323 |
Q |
| |
|
||||| |||| ||||| |||||||||||||| | |||| | ||||| |||| ||||| ||||||||| || || |||||| ||||||||||||||| |
|
|
| T |
10530296 |
tcatattggcttgtatggcgggacaagttttccaaattgggtcggaaactctttgttttataacatggtgtctcttcgcatcgataattgtgaatattgc |
10530395 |
T |
|
| Q |
324 |
gtgacacttccacc |
337 |
Q |
| |
|
||||||||||||| |
|
|
| T |
10530396 |
atgacacttccacc |
10530409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 343
Target Start/End: Complemental strand, 11129450 - 11129330
Alignment:
| Q |
223 |
tgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattg |
322 |
Q |
| |
|
|||| |||| ||| ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| || || |||| |||||| |||||| |
|
|
| T |
11129450 |
tgaacatttacttttatggcgggacaagttttcctagttggttgggagattcttcattttctaacatggtgtcactttgcatagaaaattgtcgatattg |
11129351 |
T |
|
| Q |
323 |
tgtgacacttccaccaatagg |
343 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
11129350 |
tgtgacacttccaccactagg |
11129330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 343
Target Start/End: Original strand, 13345634 - 13345854
Alignment:
| Q |
123 |
attgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcc |
222 |
Q |
| |
|
||||||||||||||| | |||| | ||||||| ||||| |||| || || ||||| |||||| ||||||||||||||| || | || ||| || | |
|
|
| T |
13345634 |
attgaggagttagagttacaatggagcaaacaaacggaagactcgcgaatagagaaagatgtgcttgatatgttgcaaccatcatttaacctgaggaaac |
13345733 |
T |
|
| Q |
223 |
tgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattg |
322 |
Q |
| |
|
||| ||| | || |||||||||||||| ||||| ||||||||||| || | | ||||||||||||||| ||| | | ||| | |||||||||||||| |
|
|
| T |
13345734 |
tgagcattcggttgtatggtgggacaagctttccgagttggttgggtgatccattgttttctaacatggtgtccttgtgtatctcgaattgtgaatattg |
13345833 |
T |
|
| Q |
323 |
tgtgacacttccaccaatagg |
343 |
Q |
| |
|
||| |||||||||||| |||| |
|
|
| T |
13345834 |
tgtaacacttccaccactagg |
13345854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 237 - 343
Target Start/End: Complemental strand, 11158424 - 11158318
Alignment:
| Q |
237 |
tatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccac |
336 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||| ||||||| |||||||||||||| || || |||| ||||||| ||||||||| |||||||||| |
|
|
| T |
11158424 |
tatggtgggacaagctttccaagttggttgggagattcttcattttctaacatggtgtcacttagcatagaaaattgtggatattgtgtaacacttccac |
11158325 |
T |
|
| Q |
337 |
caatagg |
343 |
Q |
| |
|
|| |||| |
|
|
| T |
11158324 |
cactagg |
11158318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 335
Target Start/End: Original strand, 13172606 - 13172791
Alignment:
| Q |
150 |
aaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcctgaatatttgcttatatggtgggacaa |
249 |
Q |
| |
|
||||||| ||||| |||| || || ||||| |||||| ||||||||||||||| || | || ||| || |||| ||| |||| ||||||||||||| |
|
|
| T |
13172606 |
aaacaaacggaagactcgcgaatagagaaagatgtgcttgatatgttgcaaccatcatttaacctgaggaaactgagcattagcttgtatggtgggacaa |
13172705 |
T |
|
| Q |
250 |
gttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttcca |
335 |
Q |
| |
|
| ||||| ||||||||||| || ||| |||||||||||||| ||| | | ||| | ||||||||||||||||| ||||||||| |
|
|
| T |
13172706 |
gctttccgagttggttgggtgatccttttttttctaacatggtgtccttgtgtatctcgaattgtgaatattgtgtaacacttcca |
13172791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 343
Target Start/End: Original strand, 8862951 - 8863054
Alignment:
| Q |
240 |
ggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccaccaa |
339 |
Q |
| |
|
||||||||||| ||||| ||||||||||| ||||||| |||||||||||||| || || |||| ||||||| |||||||||||||||||||||| |
|
|
| T |
8862951 |
ggtgggacaagctttccatgttggttgggagattcttcattttctaacatggtgtcactgtgcattgaaaattgtggatattgtgtgacacttccaccac |
8863050 |
T |
|
| Q |
340 |
tagg |
343 |
Q |
| |
|
|||| |
|
|
| T |
8863051 |
tagg |
8863054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 343
Target Start/End: Original strand, 10890968 - 10891074
Alignment:
| Q |
237 |
tatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccac |
336 |
Q |
| |
|
|||||||||||||| ||||| ||||||| ||| ||||||| |||||||||||||| || || |||| ||||||| |||||||||||||||||||| |
|
|
| T |
10890968 |
tatggtgggacaagctttccatgttggttaggagattcttcattttctaacatggtgtcactgtgcattgaaaattgtggatattgtgtgacacttccac |
10891067 |
T |
|
| Q |
337 |
caatagg |
343 |
Q |
| |
|
|| |||| |
|
|
| T |
10891068 |
cactagg |
10891074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 343
Target Start/End: Original strand, 13334569 - 13334675
Alignment:
| Q |
237 |
tatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccac |
336 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||| || ||| ||||||||||||||| ||| | | ||| | ||||||||||||||||| |||||||||| |
|
|
| T |
13334569 |
tatggtggaacaagctttccgagttggttgggtgatcctttgttttctaacatggtgtccttgtgtatctcgaattgtgaatattgtgtaacacttccac |
13334668 |
T |
|
| Q |
337 |
caatagg |
343 |
Q |
| |
|
|| |||| |
|
|
| T |
13334669 |
cactagg |
13334675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 11147261 - 11147206
Alignment:
| Q |
237 |
tatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggt |
292 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||| ||||||| |||||||||||||| |
|
|
| T |
11147261 |
tatggtgggacaagctttccaagttggttgggagattcttcattttctaacatggt |
11147206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 12130070 - 12130165
Alignment:
| Q |
243 |
gggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccacca |
338 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||| |||||| ||||| || || | |||||||| |||||| |||||| |||||||||||||| |
|
|
| T |
12130070 |
gggacaagttttccaagttggttgggagattctttgttttccaacattgtgtctgttcgcatcacaaattgttcatattgcatgacacttccacca |
12130165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 343
Target Start/End: Original strand, 13162645 - 13162751
Alignment:
| Q |
237 |
tatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccac |
336 |
Q |
| |
|
|||||||| ||||| || || ||||||||||| || ||| ||||||||||||||| ||| | | ||| | ||||||||||||||||| |||||||||| |
|
|
| T |
13162645 |
tatggtggaacaagcttcccgagttggttgggtgatcctttgttttctaacatggtgtccttgtgtatctcgaattgtgaatattgtgtaacacttccac |
13162744 |
T |
|
| Q |
337 |
caatagg |
343 |
Q |
| |
|
|| |||| |
|
|
| T |
13162745 |
cactagg |
13162751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 11245026 - 11244926
Alignment:
| Q |
244 |
ggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccaccaatagg |
343 |
Q |
| |
|
||||||||||||| |||| |||||| ||||||| |||||||||||||| || || ||||| ||||| || ||||||||||||||| || ||| |||| |
|
|
| T |
11245026 |
ggacaagttttccatgttgattgggagattcttcattttctaacatggtttctctttgcatcgataattttgcatattgtgtgacactacctccagtagg |
11244927 |
T |
|
| Q |
344 |
g |
344 |
Q |
| |
|
| |
|
|
| T |
11244926 |
g |
11244926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 13397148 - 13397203
Alignment:
| Q |
237 |
tatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggt |
292 |
Q |
| |
|
|||||||||| ||| ||||| ||||||||||| ||| |||||||||||||||||| |
|
|
| T |
13397148 |
tatggtgggataagctttccaagttggttgggggattgttcgttttctaacatggt |
13397203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 335
Target Start/End: Complemental strand, 56232 - 55911
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
|||||| || |||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| |
|
|
| T |
56232 |
agagctaaggaaattcccaaacctacaaggaaaacttaccatcaataacctggataatgttgttgatgccagagaggcacacgatgcaaacctgaaaagc |
56133 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
56132 |
aaagagaaaattgaggagttagagctgatatggggaaatcaaagtgaagactcgcaaaaagtgaaagttgtgctcgatatgttgcaaccaccaataaatt |
56033 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
|||||||| |||||||||| || |||||||||||||| ||||| ||||||||||||| |||||| |||| |||||||||||| ||| | |||| |||||| |
|
|
| T |
56032 |
tgaagagcttgaatatttgtttgtatggtgggacaagctttccgagttggttgggaagttcttcattttataacatggtatctctcagtatcagtaattg |
55933 |
T |
|
| Q |
314 |
tgaatattgtgtgacacttcca |
335 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
55932 |
tgaaaattgtgtgacacttcca |
55911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 14 - 318
Target Start/End: Original strand, 26908327 - 26908631
Alignment:
| Q |
14 |
agagctcagtaaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagc |
113 |
Q |
| |
|
||||||||| ||||| ||||||||| |||||||||||||| |||||||| ||||||| |||||||||| ||||||| | ||||||||||||||||| |
|
|
| T |
26908327 |
agagctcagaaaatttcaaaacctacagggaaaacttaccattaagaacctgcataatgtcgttgatgccacagaggcagaagatgccaacttgaaaaga |
26908426 |
T |
|
| Q |
114 |
aaagagaaaattgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatt |
213 |
Q |
| |
|
||||||||||| |||||||||||| || | |||||||||||||||||||| || | | |||||||| ||||||| ||||||||||| ||| |||||||| |
|
|
| T |
26908427 |
aaagagaaaatcgaggagttagagttgctttggggaaaacaaagtgaagattcactacaagtgaaatttgtgcttgatatgttgcatccaccaataaatc |
26908526 |
T |
|
| Q |
214 |
tgaagagcctgaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattg |
313 |
Q |
| |
|
||||||||||||| ||| ||| ||||||||||||||||| || |||||||||||| | ||||| |||||||| ||||| ||||| | ||| |||||||| |
|
|
| T |
26908527 |
tgaagagcctgaaaattgacttgtatggtgggacaagtttcccgagttggttgggagactcttcattttctaagatggtgtcccttcacataactaattg |
26908626 |
T |
|
| Q |
314 |
tgaat |
318 |
Q |
| |
|
||||| |
|
|
| T |
26908627 |
tgaat |
26908631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 24 - 337
Target Start/End: Complemental strand, 44956297 - 44955984
Alignment:
| Q |
24 |
aaattctcaaacctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagcaaagagaaaa |
123 |
Q |
| |
|
||||| ||| |||||||||||||||| | ||| ||||| || ||||||| | |||||||| ||||||||| |||| ||| |||||||||||||| ||| |
|
|
| T |
44956297 |
aaattttcacacctacaaggaaaactcatcatgaagaacttgcataatgtcatagatgccaaggaggcacactatgcgaacctgaaaagcaaagagcaaa |
44956198 |
T |
|
| Q |
124 |
ttgaggagttagagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcct |
223 |
Q |
| |
|
|||| || || |||||| ||||||||||||| |||||||| |||| |||||||||||| ||||| ||||||||||||||| |||| || ||||||| || |
|
|
| T |
44956197 |
ttgaagacttggagctgctatggggaaaacatagtgaagactcgctaaaagtgaaagtcgtgcttgatatgttgcaaccaccaatgaacctgaagagtct |
44956098 |
T |
|
| Q |
224 |
gaatatttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgt |
323 |
Q |
| |
|
|| ||| ||| |||||||||||||| ||||| | |||||||||| ||| ||||||||||||||||| ||||| |||||| |||||| | |||||| |
|
|
| T |
44956097 |
aaaaattgacttctatggtgggacaagctttccaaattggttgggagatttttcgttttctaacatggcgtccctttgcatcagtaattgagggtattgt |
44955998 |
T |
|
| Q |
324 |
gtgacacttccacc |
337 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
44955997 |
gtaacacttccacc |
44955984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 34 - 337
Target Start/End: Original strand, 11486494 - 11486797
Alignment:
| Q |
34 |
acctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagcaaagagaaaattgaggagtt |
133 |
Q |
| |
|
|||||||||||| | |||||| |||||||| ||||||| ||||||||| ||||||| | ||||||||| | |||||||||||| |||||||| || |
|
|
| T |
11486494 |
acctacaaggaagcttaaccatcaagaacctgcataatgtcattgatgccacagaggcagaagatgccaaccttaaaagcaaagagcaaattgagatatt |
11486593 |
T |
|
| Q |
134 |
agagctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcctgaatatttgc |
233 |
Q |
| |
|
| | |||| |||||||||| ||||||||| |||| |||||||||||||||||| ||||||||||| ||| ||||||| | |||| | |||| ||| | |
|
|
| T |
11486594 |
aaatctgaaatggggaaaattaagtgaagactcgctaaaagtgaaagttgtgcttgatatgttgcatccaccaataaactcgaagggactgagcattgac |
11486693 |
T |
|
| Q |
234 |
ttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttc |
333 |
Q |
| |
|
|| |||||||||||||||||||| | ||||||||| ||||||| |||||||| ||||| ||||| ||||| | ||||||||||||| ||||||||| |
|
|
| T |
11486694 |
ttgtatggtgggacaagttttccgaattggttgggtgattcttcattttctaaaatggtgtccctttacatcaatgattgtgaatattgcatgacacttc |
11486793 |
T |
|
| Q |
334 |
cacc |
337 |
Q |
| |
|
|||| |
|
|
| T |
11486794 |
cacc |
11486797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 36 - 337
Target Start/End: Complemental strand, 17851534 - 17851233
Alignment:
| Q |
36 |
ctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagcaaagagaaaattgaggagttag |
135 |
Q |
| |
|
|||||||||| |||||||||| |||||||| || |||| |||| |||| ||| ||| |||||||| |||||||||||||||||||| ||| |||| | |
|
|
| T |
17851534 |
ctacaaggaacacttaccatcaagaacctgcatgatgtcattgaggccagagatgcaggtgatgccaatttgaaaagcaaagagaaaatggagaagttgg |
17851435 |
T |
|
| Q |
136 |
agctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcctgaatatttgctt |
235 |
Q |
| |
|
|||| |||||| |||||| |||||| |||| || || |||| ||||| ||||||||||||||| | | || |||||| || | ||| ||| |
|
|
| T |
17851434 |
agctacaatggggcgaacaaactgaagactcgcgaatagaaaaagacgtgcttgatatgttgcaaccatcggttaacctgaagaaactaagcattgactt |
17851335 |
T |
|
| Q |
236 |
atatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttcca |
335 |
Q |
| |
|
|||||||||||||||||||| |||||| | ||| ||||||||||||||||||| || | | | |||||| |||| ||||| |||| ||||||||||| |
|
|
| T |
17851334 |
ttatggtgggacaagttttccaagttggctaggagattcttcgttttctaacatcgtgttcttgggcatcagtaatggtgaacattgcatgacacttcca |
17851235 |
T |
|
| Q |
336 |
cc |
337 |
Q |
| |
|
|| |
|
|
| T |
17851234 |
cc |
17851233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 345
Target Start/End: Original strand, 29838101 - 29838410
Alignment:
| Q |
36 |
ctacaaggaaaacttaccatcgagaacctggataatgttgttgatgccaaagaggcacacgatgccaacttgaaaagcaaagagaaaattgaggagttag |
135 |
Q |
| |
|
||||| ||||||||||||||| ||||||| ||||||| |||| ||| |||||| ||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
29838101 |
ctacagggaaaacttaccatcttgaacctgcataatgtcactgattccatggaggcattttctgccaacttaaaaagcaaagagcaaattgaggagttag |
29838200 |
T |
|
| Q |
136 |
agctgatatggggaaaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcctgaatatttgctt |
235 |
Q |
| |
|
| ||||||| |||||| |||||| | || | |||| |||||| |||||||||| |||| ||||||| ||||||| |||| |||| ||| |
|
|
| T |
29838201 |
tattacaatggggagaacaaactgaagaccatcgaactgagaaaactgtgcttgatatgttgcgaccatcaataaacttgaagaaactgagtattggcta |
29838300 |
T |
|
| Q |
236 |
atatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttcca |
335 |
Q |
| |
|
||||| || | ||| ||||| |||||||||||| ||||||| || | ||||||||| | ||| |||||| ||||||||||||||| | ||||||||| |
|
|
| T |
29838301 |
ctatggcggaaaaagctttccaagttggttgggagattcttcattctttaacatggtgtaccttagcatcagtaattgtgaatattgccttacacttcca |
29838400 |
T |
|
| Q |
336 |
ccaatagggc |
345 |
Q |
| |
|
|| |||||| |
|
|
| T |
29838401 |
tcactagggc |
29838410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 335
Target Start/End: Complemental strand, 134382 - 134197
Alignment:
| Q |
150 |
aaacaaagtgaagagtcgcaaaaagtgaaagttgtgctggatatgttgcaaccagcaataaatttgaagagcctgaatatttgcttatatggtgggacaa |
249 |
Q |
| |
|
||||||| ||||| |||| || || ||||| |||||| ||||||||||||||| || | || ||| || |||| ||| |||| ||||||||||||| |
|
|
| T |
134382 |
aaacaaacggaagactcgcgaatagagaaagatgtgcttgatatgttgcaaccatcatttaacctgaggaaactgagcattagcttgtatggtgggacaa |
134283 |
T |
|
| Q |
250 |
gttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttcca |
335 |
Q |
| |
|
| ||||| ||||||||||| || ||| |||||||||||||| ||| | | ||| | ||||||||||||||||| ||||||||| |
|
|
| T |
134282 |
gctttccgagttggttgggtgatccttttttttctaacatggtgtccttgtgtatctcgaattgtgaatattgtgtaacacttcca |
134197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 343
Target Start/End: Complemental strand, 144343 - 144237
Alignment:
| Q |
237 |
tatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccac |
336 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||| || ||| ||||||||||||||| ||| | | ||| | ||||||||||||||||| |||||||||| |
|
|
| T |
144343 |
tatggtggaacaagctttccgagttggttgggtgatcctttgttttctaacatggtgtccttgtgtatctcgaattgtgaatattgtgtaacacttccac |
144244 |
T |
|
| Q |
337 |
caatagg |
343 |
Q |
| |
|
|| |||| |
|
|
| T |
144243 |
cactagg |
144237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 343
Target Start/End: Complemental strand, 152648 - 152542
Alignment:
| Q |
237 |
tatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggtatccctccgcatcactaattgtgaatattgtgtgacacttccac |
336 |
Q |
| |
|
|||||||| ||||| || || ||||||||||| || ||| ||||||||||||||| ||| | | ||| | ||||||||||||||||| |||||||||| |
|
|
| T |
152648 |
tatggtggaacaagcttcccgagttggttgggtgatcctttgttttctaacatggtgtccttgtgtatctcgaattgtgaatattgtgtaacacttccac |
152549 |
T |
|
| Q |
337 |
caatagg |
343 |
Q |
| |
|
|| |||| |
|
|
| T |
152548 |
cactagg |
152542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 827546 - 827610
Alignment:
| Q |
228 |
atttgcttatatggtgggacaagttttcctagttggttgggaaattcttcgttttctaacatggt |
292 |
Q |
| |
|
|||| ||| ||||||||||| |||||||| ||||||||||| ||| ||| |||||||||||||| |
|
|
| T |
827546 |
atttacttctatggtgggacgagttttccacgttggttgggagattgttcattttctaacatggt |
827610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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