View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11571_high_68 (Length: 239)

Name: NF11571_high_68
Description: NF11571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11571_high_68
NF11571_high_68
[»] chr1 (45 HSPs)
chr1 (42-223)||(16274556-16274737)
chr1 (60-223)||(41230941-41231104)
chr1 (59-223)||(9044518-9044682)
chr1 (59-223)||(22050350-22050514)
chr1 (59-229)||(29298913-29299083)
chr1 (69-223)||(22122344-22122498)
chr1 (60-229)||(40129563-40129732)
chr1 (60-199)||(22122168-22122307)
chr1 (42-211)||(43543398-43543562)
chr1 (115-223)||(15859371-15859479)
chr1 (52-149)||(46560040-46560137)
chr1 (52-172)||(51083112-51083233)
chr1 (49-187)||(14237645-14237783)
chr1 (60-223)||(31613236-31613389)
chr1 (59-187)||(13989686-13989814)
chr1 (59-187)||(21474298-21474426)
chr1 (59-164)||(41373316-41373422)
chr1 (59-187)||(16362740-16362868)
chr1 (59-170)||(21922503-21922615)
chr1 (59-170)||(23592944-23593056)
chr1 (59-177)||(21042505-21042622)
chr1 (59-151)||(48444350-48444443)
chr1 (59-170)||(21841607-21841719)
chr1 (59-177)||(22125133-22125250)
chr1 (42-104)||(42314734-42314796)
chr1 (58-158)||(20453635-20453736)
chr1 (58-171)||(48521353-48521464)
chr1 (42-98)||(34770621-34770677)
chr1 (59-177)||(20958963-20959081)
chr1 (59-164)||(22350663-22350768)
chr1 (172-223)||(43630215-43630266)
chr1 (58-177)||(47191436-47191554)
chr1 (47-165)||(16381981-16382099)
chr1 (58-134)||(21708126-21708202)
chr1 (58-134)||(21712669-21712745)
chr1 (172-223)||(16401600-16401651)
chr1 (54-177)||(52940022-52940144)
chr1 (58-140)||(13880537-13880619)
chr1 (59-141)||(14801360-14801442)
chr1 (59-141)||(14810234-14810316)
chr1 (59-129)||(51476975-51477045)
chr1 (52-149)||(21683858-21683955)
chr1 (58-134)||(11946418-11946493)
chr1 (98-159)||(45755471-45755532)
chr1 (59-154)||(21995664-21995758)
[»] chr7 (63 HSPs)
chr7 (42-222)||(8941153-8941333)
chr7 (44-223)||(45846750-45846929)
chr7 (42-223)||(8469220-8469401)
chr7 (42-223)||(14269067-14269248)
chr7 (60-223)||(11973033-11973196)
chr7 (58-219)||(23461632-23461793)
chr7 (66-223)||(15081169-15081326)
chr7 (59-223)||(16214362-16214526)
chr7 (60-223)||(21188926-21189089)
chr7 (59-198)||(5294432-5294571)
chr7 (59-223)||(14317516-14317679)
chr7 (59-198)||(5295605-5295744)
chr7 (59-198)||(5296778-5296917)
chr7 (59-223)||(38897549-38897712)
chr7 (59-190)||(9945010-9945141)
chr7 (59-187)||(26355194-26355321)
chr7 (59-187)||(26357646-26357773)
chr7 (59-187)||(11392516-11392642)
chr7 (59-177)||(14156392-14156510)
chr7 (59-187)||(27217682-27217809)
chr7 (59-187)||(18431533-18431661)
chr7 (59-187)||(457143-457271)
chr7 (59-187)||(15375927-15376055)
chr7 (59-187)||(20384337-20384465)
chr7 (59-177)||(10500735-10500852)
chr7 (59-187)||(13870166-13870294)
chr7 (59-187)||(16410880-16411008)
chr7 (59-187)||(18628386-18628514)
chr7 (60-187)||(16580541-16580668)
chr7 (59-187)||(16233342-16233471)
chr7 (59-187)||(18641092-18641220)
chr7 (60-187)||(16460036-16460163)
chr7 (59-170)||(41523756-41523868)
chr7 (59-172)||(32126325-32126439)
chr7 (62-170)||(41526218-41526327)
chr7 (59-170)||(14948333-14948445)
chr7 (59-149)||(24703081-24703172)
chr7 (59-149)||(24705528-24705619)
chr7 (54-177)||(16997027-16997149)
chr7 (54-171)||(14980665-14980781)
chr7 (54-171)||(15410141-15410257)
chr7 (62-177)||(38519616-38519732)
chr7 (59-177)||(42462806-42462923)
chr7 (68-187)||(20484900-20485018)
chr7 (60-151)||(20488296-20488387)
chr7 (59-177)||(129943-130059)
chr7 (54-140)||(18455585-18455671)
chr7 (108-174)||(32302163-32302228)
chr7 (60-172)||(14928290-14928402)
chr7 (60-172)||(15351756-15351868)
chr7 (52-171)||(9176828-9176946)
chr7 (106-172)||(14259334-14259398)
chr7 (59-157)||(13893401-13893498)
chr7 (59-159)||(15095637-15095737)
chr7 (58-171)||(9724801-9724913)
chr7 (58-144)||(11768089-11768174)
chr7 (59-174)||(15203116-15203230)
chr7 (59-159)||(8135238-8135337)
chr7 (54-154)||(11085478-11085577)
chr7 (59-134)||(11054690-11054765)
chr7 (59-126)||(19485973-19486039)
chr7 (54-140)||(37793387-37793473)
chr7 (76-152)||(9032533-9032608)
[»] scaffold0040 (5 HSPs)
scaffold0040 (45-223)||(20522-20700)
scaffold0040 (69-223)||(43416-43570)
scaffold0040 (59-187)||(13033-13161)
scaffold0040 (64-160)||(14213-14307)
scaffold0040 (59-171)||(23059-23168)
[»] scaffold0322 (1 HSPs)
scaffold0322 (42-223)||(18615-18796)
[»] chr6 (56 HSPs)
chr6 (42-223)||(17027847-17028028)
chr6 (42-211)||(25689323-25689492)
chr6 (43-223)||(25535893-25536073)
chr6 (56-223)||(34963858-34964025)
chr6 (42-223)||(18914803-18914983)
chr6 (58-223)||(30676038-30676203)
chr6 (59-223)||(31629861-31630025)
chr6 (56-223)||(23992907-23993074)
chr6 (42-197)||(25721009-25721164)
chr6 (59-211)||(16198295-16198447)
chr6 (60-223)||(1598927-1599082)
chr6 (58-229)||(19005823-19005991)
chr6 (56-164)||(25753385-25753493)
chr6 (56-164)||(25755555-25755663)
chr6 (59-187)||(8055851-8055978)
chr6 (59-187)||(22783048-22783176)
chr6 (59-172)||(17882710-17882823)
chr6 (59-187)||(18333806-18333934)
chr6 (59-187)||(19858136-19858264)
chr6 (59-187)||(24423367-24423495)
chr6 (59-187)||(26923659-26923787)
chr6 (59-187)||(33865098-33865226)
chr6 (135-223)||(19847368-19847456)
chr6 (59-187)||(2290392-2290520)
chr6 (59-170)||(33862633-33862745)
chr6 (59-164)||(18343033-18343139)
chr6 (59-158)||(12743168-12743268)
chr6 (59-177)||(17229064-17229181)
chr6 (59-172)||(1540125-1540239)
chr6 (59-172)||(18454067-18454179)
chr6 (47-172)||(23527288-23527413)
chr6 (60-187)||(2077125-2077251)
chr6 (59-174)||(20137513-20137626)
chr6 (59-174)||(22195243-22195356)
chr6 (58-159)||(13612331-13612432)
chr6 (54-159)||(18697383-18697487)
chr6 (52-159)||(23077575-23077682)
chr6 (58-120)||(19003468-19003530)
chr6 (54-159)||(18707134-18707238)
chr6 (59-185)||(25739249-25739373)
chr6 (58-171)||(18895485-18895594)
chr6 (52-177)||(19363301-19363422)
chr6 (58-159)||(19401046-19401147)
chr6 (106-172)||(19772714-19772779)
chr6 (58-140)||(14978542-14978624)
chr6 (59-174)||(20183657-20183772)
chr6 (59-174)||(22152219-22152334)
chr6 (58-140)||(25618899-25618981)
chr6 (52-149)||(35012023-35012120)
chr6 (59-171)||(22375800-22375911)
chr6 (106-172)||(22806678-22806743)
chr6 (59-126)||(8226740-8226806)
chr6 (59-126)||(23531896-23531962)
chr6 (107-136)||(15704613-15704642)
chr6 (55-104)||(23415908-23415957)
chr6 (59-154)||(16246176-16246270)
[»] chr5 (39 HSPs)
chr5 (42-223)||(17516273-17516454)
chr5 (58-223)||(2153951-2154116)
chr5 (60-223)||(20917168-20917331)
chr5 (60-223)||(32028703-32028866)
chr5 (42-183)||(24473792-24473933)
chr5 (42-176)||(29330698-29330832)
chr5 (59-223)||(295603-295759)
chr5 (59-187)||(38620256-38620384)
chr5 (59-187)||(39245956-39246084)
chr5 (59-187)||(39364204-39364332)
chr5 (59-170)||(29346817-29346929)
chr5 (59-170)||(29349290-29349402)
chr5 (59-170)||(29351763-29351875)
chr5 (59-170)||(42244576-42244688)
chr5 (59-170)||(20909850-20909963)
chr5 (59-170)||(263982-264094)
chr5 (58-164)||(40723459-40723566)
chr5 (59-164)||(23065358-23065464)
chr5 (59-170)||(10732151-10732263)
chr5 (59-159)||(41860581-41860681)
chr5 (59-159)||(14048940-14049040)
chr5 (59-159)||(41094818-41094918)
chr5 (47-171)||(15797281-15797405)
chr5 (59-177)||(23470626-23470744)
chr5 (59-177)||(23476337-23476456)
chr5 (50-171)||(26739788-26739908)
chr5 (58-110)||(20901325-20901377)
chr5 (54-177)||(25573572-25573694)
chr5 (64-177)||(25574817-25574929)
chr5 (64-177)||(25576010-25576122)
chr5 (58-140)||(22413056-22413138)
chr5 (64-171)||(26731989-26732095)
chr5 (59-159)||(31062196-31062293)
chr5 (59-131)||(21914492-21914564)
chr5 (59-126)||(10774664-10774731)
chr5 (59-134)||(21405628-21405703)
chr5 (59-126)||(40726666-40726732)
chr5 (58-159)||(31251891-31251991)
chr5 (53-141)||(20572731-20572818)
[»] scaffold0747 (1 HSPs)
scaffold0747 (42-223)||(1386-1567)
[»] chr8 (53 HSPs)
chr8 (42-223)||(11361195-11361376)
chr8 (59-223)||(27471737-27471901)
chr8 (56-223)||(16412632-16412799)
chr8 (59-223)||(19897192-19897356)
chr8 (42-223)||(38549116-38549297)
chr8 (59-223)||(20457356-20457520)
chr8 (59-223)||(32122406-32122570)
chr8 (59-229)||(24049282-24049452)
chr8 (58-223)||(1326444-1326609)
chr8 (60-223)||(20403957-20404120)
chr8 (59-223)||(15202306-15202470)
chr8 (59-223)||(37609722-37609886)
chr8 (59-223)||(32810381-32810536)
chr8 (59-187)||(5852507-5852634)
chr8 (59-172)||(24485254-24485368)
chr8 (58-172)||(45289760-45289875)
chr8 (59-187)||(1485222-1485350)
chr8 (59-187)||(4484100-4484228)
chr8 (59-187)||(14408658-14408786)
chr8 (59-187)||(14824596-14824724)
chr8 (59-187)||(18677276-18677404)
chr8 (59-187)||(20045409-20045537)
chr8 (59-177)||(22252315-22252432)
chr8 (59-170)||(22002591-22002703)
chr8 (59-170)||(22245237-22245347)
chr8 (115-223)||(19936294-19936393)
chr8 (60-187)||(23914804-23914931)
chr8 (59-187)||(4541584-4541712)
chr8 (59-177)||(22385077-22385193)
chr8 (151-223)||(15071238-15071310)
chr8 (52-159)||(19154005-19154112)
chr8 (59-148)||(19928758-19928847)
chr8 (54-177)||(20501225-20501347)
chr8 (59-165)||(21330771-21330876)
chr8 (60-159)||(25733821-25733920)
chr8 (58-171)||(37516548-37516660)
chr8 (59-174)||(13660854-13660969)
chr8 (59-174)||(13719497-13719612)
chr8 (52-159)||(17438657-17438764)
chr8 (59-177)||(28398423-28398540)
chr8 (54-141)||(17460203-17460290)
chr8 (60-164)||(42265510-42265614)
chr8 (58-114)||(20457989-20458045)
chr8 (52-141)||(22996682-22996770)
chr8 (59-171)||(40492028-40492139)
chr8 (59-134)||(3273867-3273942)
chr8 (66-177)||(17085077-17085187)
chr8 (66-177)||(17085311-17085421)
chr8 (59-134)||(22317911-22317986)
chr8 (59-140)||(23661266-23661347)
chr8 (58-129)||(14396910-14396981)
chr8 (58-114)||(20463192-20463248)
chr8 (59-134)||(22237050-22237125)
[»] chr3 (56 HSPs)
chr3 (42-223)||(20629495-20629676)
chr3 (42-217)||(55318607-55318782)
chr3 (42-223)||(24514161-24514342)
chr3 (56-223)||(46822939-46823106)
chr3 (60-223)||(13937295-13937458)
chr3 (60-223)||(41124617-41124780)
chr3 (60-223)||(16282079-16282242)
chr3 (56-217)||(10379823-10379984)
chr3 (60-223)||(17444084-17444247)
chr3 (60-223)||(38961158-38961322)
chr3 (59-176)||(12119185-12119302)
chr3 (60-223)||(8899510-8899664)
chr3 (59-177)||(37428549-37428667)
chr3 (59-187)||(17463998-17464126)
chr3 (59-187)||(34160146-34160274)
chr3 (60-140)||(13938301-13938381)
chr3 (56-164)||(6468345-6468454)
chr3 (59-187)||(10246936-10247064)
chr3 (59-187)||(15978355-15978483)
chr3 (59-187)||(55477312-55477440)
chr3 (59-170)||(7780559-7780671)
chr3 (59-187)||(15413251-15413379)
chr3 (59-187)||(45577655-45577783)
chr3 (59-170)||(16453489-16453601)
chr3 (59-170)||(1864367-1864479)
chr3 (151-223)||(8500198-8500270)
chr3 (59-158)||(13151002-13151102)
chr3 (59-158)||(13153470-13153570)
chr3 (59-172)||(28847833-28847947)
chr3 (58-159)||(12386281-12386382)
chr3 (59-174)||(14604801-14604914)
chr3 (154-223)||(53300919-53300988)
chr3 (54-177)||(9578480-9578602)
chr3 (60-187)||(14671706-14671832)
chr3 (151-223)||(27165930-27166002)
chr3 (59-159)||(44495489-44495588)
chr3 (56-159)||(325031-325133)
chr3 (59-185)||(16828281-16828405)
chr3 (106-172)||(22758882-22758947)
chr3 (177-223)||(10557587-10557633)
chr3 (54-136)||(24152381-24152463)
chr3 (59-177)||(32402182-32402300)
chr3 (106-172)||(43888803-43888868)
chr3 (59-159)||(43927958-43928058)
chr3 (54-141)||(11202191-11202278)
chr3 (106-141)||(18699478-18699513)
chr3 (172-223)||(45220313-45220364)
chr3 (58-159)||(49968858-49968959)
chr3 (59-126)||(22146768-22146834)
chr3 (59-126)||(37641504-37641570)
chr3 (59-165)||(46752053-46752158)
chr3 (106-172)||(12470783-12470848)
chr3 (59-97)||(45606140-45606178)
chr3 (58-140)||(50243782-50243864)
chr3 (59-134)||(13522202-13522277)
chr3 (58-129)||(26054434-26054505)
[»] scaffold0711 (1 HSPs)
scaffold0711 (42-223)||(6880-7061)
[»] scaffold0317 (1 HSPs)
scaffold0317 (42-223)||(6240-6421)
[»] scaffold0306 (2 HSPs)
scaffold0306 (42-223)||(10643-10824)
scaffold0306 (169-223)||(15589-15643)
[»] scaffold0149 (2 HSPs)
scaffold0149 (58-223)||(34174-34339)
scaffold0149 (138-223)||(30697-30782)
[»] scaffold0035 (2 HSPs)
scaffold0035 (42-223)||(107153-107334)
scaffold0035 (42-146)||(115731-115835)
[»] chr4 (47 HSPs)
chr4 (42-223)||(15489452-15489633)
chr4 (59-229)||(363045-363215)
chr4 (42-223)||(12778179-12778361)
chr4 (58-223)||(14970026-14970191)
chr4 (59-223)||(3515685-3515849)
chr4 (59-223)||(18214524-18214688)
chr4 (64-223)||(11773-11932)
chr4 (42-223)||(14745683-14745860)
chr4 (42-223)||(52872385-52872557)
chr4 (60-211)||(52313444-52313595)
chr4 (42-186)||(19858327-19858472)
chr4 (58-222)||(19617394-19617550)
chr4 (59-223)||(15354846-15355002)
chr4 (59-187)||(7640400-7640528)
chr4 (59-187)||(1836734-1836860)
chr4 (59-172)||(44616125-44616239)
chr4 (52-172)||(3485803-3485924)
chr4 (59-187)||(19243523-19243651)
chr4 (59-187)||(15117566-15117694)
chr4 (59-187)||(44772297-44772425)
chr4 (59-177)||(16043892-16044010)
chr4 (59-170)||(50221552-50221664)
chr4 (59-187)||(18238826-18238954)
chr4 (59-158)||(12032985-12033085)
chr4 (58-172)||(25031099-25031215)
chr4 (54-177)||(32306147-32306269)
chr4 (59-158)||(29268204-29268304)
chr4 (59-172)||(14873299-14873413)
chr4 (59-149)||(14717934-14718025)
chr4 (58-177)||(15792629-15792747)
chr4 (42-140)||(12611880-12611978)
chr4 (59-177)||(26049620-26049737)
chr4 (63-172)||(14651564-14651672)
chr4 (59-171)||(26014225-26014336)
chr4 (60-187)||(18022934-18023060)
chr4 (54-159)||(12841517-12841621)
chr4 (59-152)||(26790215-26790307)
chr4 (106-172)||(15011518-15011583)
chr4 (60-140)||(51463031-51463111)
chr4 (177-223)||(19858256-19858302)
chr4 (59-140)||(23802406-23802487)
chr4 (54-177)||(14852019-14852141)
chr4 (58-171)||(13591068-13591180)
chr4 (59-174)||(27996729-27996843)
chr4 (106-185)||(50161014-50161092)
chr4 (59-126)||(22354654-22354720)
chr4 (59-154)||(10057619-10057713)
[»] chr2 (55 HSPs)
chr2 (42-223)||(24671703-24671884)
chr2 (59-223)||(22106143-22106307)
chr2 (56-223)||(32214247-32214414)
chr2 (42-223)||(23706329-23706510)
chr2 (42-223)||(23932138-23932319)
chr2 (59-223)||(45027220-45027384)
chr2 (60-223)||(6726725-6726888)
chr2 (60-223)||(24368504-24368668)
chr2 (59-211)||(24918830-24918982)
chr2 (60-223)||(21154136-21154299)
chr2 (60-223)||(41523202-41523364)
chr2 (58-223)||(24528866-24529031)
chr2 (45-223)||(24682122-24682292)
chr2 (61-172)||(24897411-24897523)
chr2 (61-172)||(24899894-24900006)
chr2 (61-172)||(24902371-24902483)
chr2 (61-172)||(24904848-24904960)
chr2 (61-172)||(24907323-24907435)
chr2 (59-187)||(18809763-18809891)
chr2 (59-187)||(23711227-23711355)
chr2 (59-187)||(32038711-32038839)
chr2 (59-187)||(39683136-39683264)
chr2 (59-187)||(23131682-23131810)
chr2 (59-187)||(23134149-23134277)
chr2 (59-187)||(34401736-34401864)
chr2 (58-172)||(38968314-38968426)
chr2 (59-172)||(28577939-28578053)
chr2 (59-187)||(22695155-22695283)
chr2 (59-187)||(26508677-26508805)
chr2 (59-187)||(26506199-26506327)
chr2 (59-187)||(27919978-27920106)
chr2 (59-172)||(572232-572347)
chr2 (59-172)||(23136402-23136516)
chr2 (76-187)||(22690559-22690670)
chr2 (60-187)||(9785463-9785589)
chr2 (54-177)||(39827190-39827312)
chr2 (60-177)||(34137799-34137915)
chr2 (59-158)||(18388190-18388289)
chr2 (60-116)||(25616572-25616628)
chr2 (58-177)||(27845492-27845610)
chr2 (52-170)||(26393264-26393381)
chr2 (59-171)||(43946518-43946629)
chr2 (58-140)||(7187395-7187477)
chr2 (58-140)||(22172978-22173060)
chr2 (106-172)||(23068455-23068520)
chr2 (52-177)||(18546136-18546260)
chr2 (59-134)||(19358868-19358943)
chr2 (59-134)||(44072534-44072609)
chr2 (59-159)||(3539788-3539889)
chr2 (54-154)||(27473414-27473513)
chr2 (102-165)||(14694271-14694334)
chr2 (54-86)||(23079869-23079901)
chr2 (58-129)||(31346101-31346172)
chr2 (59-154)||(34858192-34858286)
chr2 (59-154)||(34873254-34873348)
[»] scaffold1792 (1 HSPs)
scaffold1792 (42-217)||(1042-1217)
[»] scaffold0716 (1 HSPs)
scaffold0716 (56-223)||(5372-5539)
[»] scaffold0230 (3 HSPs)
scaffold0230 (42-217)||(22683-22858)
scaffold0230 (42-223)||(20507-20688)
scaffold0230 (59-158)||(14798-14898)
[»] scaffold0494 (1 HSPs)
scaffold0494 (57-223)||(34-200)
[»] scaffold0043 (3 HSPs)
scaffold0043 (42-223)||(10662-10843)
scaffold0043 (52-172)||(27916-28036)
scaffold0043 (52-141)||(42804-42894)
[»] scaffold0021 (1 HSPs)
scaffold0021 (42-223)||(504-685)
[»] scaffold0574 (1 HSPs)
scaffold0574 (59-223)||(7129-7293)
[»] scaffold0001 (4 HSPs)
scaffold0001 (59-223)||(501742-501906)
scaffold0001 (58-177)||(447348-447466)
scaffold0001 (59-177)||(498258-498375)
scaffold0001 (59-174)||(498996-499110)
[»] scaffold0042 (1 HSPs)
scaffold0042 (60-223)||(43169-43332)
[»] scaffold0023 (2 HSPs)
scaffold0023 (56-223)||(16757-16924)
scaffold0023 (59-187)||(95231-95359)
[»] scaffold0053 (1 HSPs)
scaffold0053 (60-223)||(60614-60777)
[»] scaffold1296 (1 HSPs)
scaffold1296 (42-223)||(1931-2113)
[»] scaffold0535 (1 HSPs)
scaffold0535 (58-220)||(7465-7627)
[»] scaffold0278 (1 HSPs)
scaffold0278 (59-223)||(8610-8774)
[»] scaffold0151 (2 HSPs)
scaffold0151 (45-199)||(36585-36739)
scaffold0151 (59-165)||(31055-31160)
[»] scaffold0191 (1 HSPs)
scaffold0191 (58-197)||(3524-3663)
[»] scaffold0016 (2 HSPs)
scaffold0016 (60-192)||(184978-185110)
scaffold0016 (54-155)||(118750-118849)
[»] scaffold0019 (3 HSPs)
scaffold0019 (42-175)||(21898-22031)
scaffold0019 (59-170)||(158621-158733)
scaffold0019 (106-172)||(30010-30075)
[»] scaffold0319 (1 HSPs)
scaffold0319 (58-176)||(6046-6164)
[»] scaffold0297 (1 HSPs)
scaffold0297 (59-187)||(2918-3044)
[»] scaffold0028 (6 HSPs)
scaffold0028 (59-172)||(135047-135161)
scaffold0028 (59-172)||(137516-137630)
scaffold0028 (59-172)||(139985-140099)
scaffold0028 (59-172)||(142454-142568)
scaffold0028 (59-172)||(144923-145037)
scaffold0028 (60-134)||(3053-3127)
[»] scaffold0031 (1 HSPs)
scaffold0031 (59-170)||(56220-56332)
[»] scaffold0254 (2 HSPs)
scaffold0254 (59-172)||(21585-21699)
scaffold0254 (59-159)||(19120-19221)
[»] scaffold0146 (1 HSPs)
scaffold0146 (52-187)||(22909-23045)
[»] scaffold0134 (1 HSPs)
scaffold0134 (59-187)||(38642-38770)
[»] scaffold0063 (1 HSPs)
scaffold0063 (59-187)||(38952-39080)
[»] scaffold0029 (1 HSPs)
scaffold0029 (59-187)||(12110-12238)
[»] scaffold0323 (1 HSPs)
scaffold0323 (60-147)||(11828-11915)
[»] scaffold0695 (1 HSPs)
scaffold0695 (59-187)||(6765-6893)
[»] scaffold0546 (1 HSPs)
scaffold0546 (52-172)||(7871-7992)
[»] scaffold0359 (1 HSPs)
scaffold0359 (59-172)||(16273-16385)
[»] scaffold0109 (2 HSPs)
scaffold0109 (52-172)||(5315-5436)
scaffold0109 (52-172)||(12-133)
[»] scaffold0363 (1 HSPs)
scaffold0363 (59-170)||(10082-10194)
[»] scaffold0009 (1 HSPs)
scaffold0009 (59-177)||(191798-191915)
[»] scaffold0444 (1 HSPs)
scaffold0444 (59-170)||(14230-14342)
[»] scaffold0500 (1 HSPs)
scaffold0500 (59-172)||(8335-8447)
[»] scaffold0454 (1 HSPs)
scaffold0454 (59-170)||(419-531)
[»] scaffold0044 (1 HSPs)
scaffold0044 (59-158)||(41248-41348)
[»] scaffold0357 (1 HSPs)
scaffold0357 (53-159)||(4817-4923)
[»] scaffold0012 (1 HSPs)
scaffold0012 (52-177)||(220327-220449)
[»] scaffold0074 (3 HSPs)
scaffold0074 (151-223)||(38261-38333)
scaffold0074 (59-174)||(9044-9159)
scaffold0074 (59-154)||(1896-1990)
[»] scaffold0686 (1 HSPs)
scaffold0686 (52-159)||(2132-2239)
[»] scaffold0480 (1 HSPs)
scaffold0480 (59-174)||(10273-10387)
[»] scaffold0006 (2 HSPs)
scaffold0006 (52-159)||(97899-98006)
scaffold0006 (52-159)||(107177-107284)
[»] scaffold0780 (1 HSPs)
scaffold0780 (58-171)||(2470-2583)
[»] scaffold0145 (1 HSPs)
scaffold0145 (59-152)||(8127-8221)
[»] scaffold0010 (2 HSPs)
scaffold0010 (60-177)||(7144-7260)
scaffold0010 (59-177)||(1492-1609)
[»] scaffold0005 (1 HSPs)
scaffold0005 (63-172)||(165620-165728)
[»] scaffold0481 (1 HSPs)
scaffold0481 (59-135)||(2-78)
[»] scaffold0122 (1 HSPs)
scaffold0122 (59-135)||(33837-33913)
[»] scaffold0232 (1 HSPs)
scaffold0232 (66-187)||(4150-4270)
[»] scaffold1835 (1 HSPs)
scaffold1835 (54-177)||(142-264)
[»] scaffold1419 (1 HSPs)
scaffold1419 (47-165)||(903-1020)
[»] scaffold0282 (1 HSPs)
scaffold0282 (59-169)||(17335-17444)
[»] scaffold0096 (1 HSPs)
scaffold0096 (106-172)||(22037-22102)
[»] scaffold0180 (2 HSPs)
scaffold0180 (58-159)||(33668-33769)
scaffold0180 (58-134)||(28328-28404)
[»] scaffold0290 (1 HSPs)
scaffold0290 (54-141)||(1042-1129)
[»] scaffold0169 (1 HSPs)
scaffold0169 (54-177)||(28691-28812)
[»] scaffold0848 (1 HSPs)
scaffold0848 (58-159)||(2020-2121)
[»] scaffold0417 (1 HSPs)
scaffold0417 (59-177)||(464-581)
[»] scaffold0394 (1 HSPs)
scaffold0394 (58-140)||(13019-13101)
[»] scaffold0205 (1 HSPs)
scaffold0205 (106-172)||(30593-30658)
[»] scaffold0091 (1 HSPs)
scaffold0091 (71-177)||(31648-31752)
[»] scaffold0054 (1 HSPs)
scaffold0054 (52-170)||(75018-75134)
[»] scaffold0034 (1 HSPs)
scaffold0034 (106-172)||(120893-120958)
[»] scaffold0018 (1 HSPs)
scaffold0018 (102-172)||(21634-21703)
[»] scaffold0007 (1 HSPs)
scaffold0007 (59-164)||(158822-158927)
[»] scaffold0125 (1 HSPs)
scaffold0125 (54-141)||(1046-1133)
[»] scaffold0452 (1 HSPs)
scaffold0452 (106-172)||(12670-12735)
[»] scaffold0083 (1 HSPs)
scaffold0083 (58-140)||(42266-42348)
[»] scaffold0046 (2 HSPs)
scaffold0046 (59-177)||(16085-16203)
scaffold0046 (59-177)||(25272-25390)
[»] scaffold0008 (1 HSPs)
scaffold0008 (59-164)||(135504-135609)
[»] scaffold0037 (2 HSPs)
scaffold0037 (59-140)||(82967-83048)
scaffold0037 (54-159)||(81519-81624)
[»] scaffold0117 (2 HSPs)
scaffold0117 (58-126)||(40218-40285)
scaffold0117 (58-129)||(42653-42724)
[»] scaffold0022 (1 HSPs)
scaffold0022 (127-171)||(128165-128209)
[»] scaffold0175 (1 HSPs)
scaffold0175 (59-134)||(8619-8694)
[»] scaffold0112 (1 HSPs)
scaffold0112 (58-141)||(23123-23206)
[»] scaffold0101 (1 HSPs)
scaffold0101 (59-134)||(476-551)
[»] scaffold0077 (1 HSPs)
scaffold0077 (54-177)||(54807-54929)
[»] scaffold0057 (1 HSPs)
scaffold0057 (58-141)||(72399-72482)
[»] scaffold0439 (1 HSPs)
scaffold0439 (59-159)||(12346-12446)
[»] scaffold0379 (1 HSPs)
scaffold0379 (59-171)||(3893-4006)
[»] scaffold0106 (1 HSPs)
scaffold0106 (63-149)||(18857-18943)
[»] scaffold0011 (2 HSPs)
scaffold0011 (58-144)||(37282-37367)
scaffold0011 (106-141)||(126760-126795)
[»] scaffold0877 (1 HSPs)
scaffold0877 (52-141)||(2021-2110)
[»] scaffold0347 (1 HSPs)
scaffold0347 (58-152)||(9759-9854)
[»] scaffold1128 (1 HSPs)
scaffold1128 (58-134)||(475-550)
[»] scaffold0819 (1 HSPs)
scaffold0819 (59-126)||(5351-5418)
[»] scaffold0065 (1 HSPs)
scaffold0065 (59-165)||(55888-55993)
[»] scaffold0004 (1 HSPs)
scaffold0004 (59-142)||(333206-333289)
[»] scaffold0292 (1 HSPs)
scaffold0292 (106-172)||(7495-7559)
[»] scaffold0107 (1 HSPs)
scaffold0107 (59-97)||(51328-51366)
[»] scaffold1439 (1 HSPs)
scaffold1439 (59-140)||(1045-1126)
[»] scaffold0853 (1 HSPs)
scaffold0853 (116-177)||(9-68)
[»] scaffold0601 (1 HSPs)
scaffold0601 (42-79)||(179-216)
[»] scaffold0003 (1 HSPs)
scaffold0003 (42-79)||(160279-160316)
[»] scaffold0338 (1 HSPs)
scaffold0338 (59-134)||(10762-10837)
[»] scaffold0200 (1 HSPs)
scaffold0200 (58-129)||(18575-18646)
[»] scaffold0153 (2 HSPs)
scaffold0153 (59-154)||(5255-5349)
scaffold0153 (59-154)||(12275-12369)
[»] scaffold0108 (1 HSPs)
scaffold0108 (59-147)||(3994-4082)


Alignment Details
Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 16274556 - 16274737
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16274556 ccttgcaattgatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 16274655  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  16274656 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 16274737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 41230941 - 41231104
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41230941 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaagtttagtttttgagaatttgagaattag 41231040  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  41231041 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 41231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 9044518 - 9044682
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9044518 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtacttaacatgttgtaggtttagtttttgagaatttgagaatta 9044617  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9044618 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 9044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 22050350 - 22050514
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22050350 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaatta 22050449  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  22050450 gggttaagagcgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 22050514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 59 - 229
Target Start/End: Complemental strand, 29299083 - 29298913
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29299083 taaggtaagggtgggactaacattcaataatcttgaatctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaatta 29298984  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgcttttgatgat 229  Q
      ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| |||||    
T  29298983 tggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatgggttgctttttatgat 29298913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 22122344 - 22122498
Alignment:
Q  69 gtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagag 168  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  22122344 gtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaattagggttaagag 22122443  T
Q  169 tgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  22122444 tgatgattgtgatgattttgaatgaaagtgaagttgaataatatgggttgctttt 22122498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 60 - 229
Target Start/End: Complemental strand, 40129732 - 40129563
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    |||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  40129732 aaggtaagggtgagactaacattcaataattttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaattagagaattag 40129633  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgcttttgatgat 229  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| |||||    
T  40129632 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatgggttgctttttatgat 40129563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 22122168 - 22122307
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22122168 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaattag 22122267  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtga 199  Q
     |||||||||||||||||||||||||||||||||||||||    
T  22122268 ggttaagagtgatgattgtgatgattttgaatgaaagtga 22122307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 42 - 211
Target Start/End: Complemental strand, 43543562 - 43543398
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaa---aattgtatttaacatgttgtaggtttagt 138  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||    
T  43543562 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaataattgtatttaacatgttgtaggtttagt 43543463  T
Q  139 ttttgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataata 211  Q
    ||||||||||||        | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43543462 ttttgagaattt--------gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataata 43543398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 15859371 - 15859479
Alignment:
Q  115 tatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacag 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  15859371 tatttaacatgttgtaggtttagtttttgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatag 15859470  T
Q  215 gttgctttt 223  Q
    |||||||||    
T  15859471 gttgctttt 15859479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 46560137 - 46560040
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatt 149  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46560137 gatttattaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatt 46560040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 51083233 - 51083112
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaattt 150  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  51083233 gatttattaaggtaagggtgggactaacattcaataatcttaagtctatgattttgaaaattggatttaacatgttgtaggttttagtttttgagaattt 51083134  T
Q  151 gagaattagagttaagagtgat 172  Q
    | ||||||| ||||| ||||||    
T  51083133 gggaattagggttaaaagtgat 51083112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 14237645 - 14237783
Alignment:
Q  49 attgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaa 147  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  14237645 attgatttattaaggtaagggtgggactaatattcaataatcttaagtctatgattctgaaaattggatttaacatgttgtaggttttagtttttgagaa 14237744  T
Q  148 tttgagaattagagttaagagtgatgattgtgatgatttt 187  Q
    |||| ||||||| ||||| ||| || ||| ||||||||||    
T  14237745 tttgggaattagggttaaaagtaattatt-tgatgatttt 14237783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 31613389 - 31613236
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||| ||||||| ||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  31613389 aaggtaatggtgggactaacattcaataatcttgagtttgtgattgtgaaaattgtatttaatatgttgtaggtttagttttcgagaatttgagaattag 31613290  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     | |||||         ||||||||||||||||||||||| |||||||||||  ||||||||||    
T  31613289 -ggtaaga---------gtgatgattttgaatgaaagtgaagttgaataatatgggttgctttt 31613236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 13989814 - 13989686
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  13989814 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 13989715  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  13989714 agggttaaaagtgattatt-tgatgatttt 13989686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 21474298 - 21474426
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||   |||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  21474298 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 21474397  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  21474398 agggttaaaagtgattatt-tgatgatttt 21474426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 164
Target Start/End: Complemental strand, 41373422 - 41373316
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  41373422 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 41373323  T
Q  158 agagtta 164  Q
    || ||||    
T  41373322 agggtta 41373316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 16362868 - 16362740
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  |||     
T  16362868 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttggaaata 16362769  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  16362768 agggttaaaagtgattatt-tgatgatttt 16362740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 21922503 - 21922615
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  21922503 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgggaatt 21922602  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  21922603 agggttaaaagtg 21922615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 23592944 - 23593056
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||   |||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  23592944 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 23593043  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  23593044 agggttaaaagtg 23593056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 21042505 - 21042622
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| ||| ||||  |||||||||||||||||||||||||||||||| |||| |||||    
T  21042505 taaggtaagggtgggactaacattcaatcttcttaagcctatgattatgataattagatttaacatgttgtaggtttagtttttgagaaattga-aatta 21042603  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  21042604 gggttaagagtgataattg 21042622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 48444443 - 48444350
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttg 151  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  48444443 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttg 48444350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 21841719 - 21841607
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||    
T  21841719 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttcagaatt 21841620  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  21841619 agggttaaaagtg 21841607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 22125250 - 22125133
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||||||||||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| |||||||||||||||| || |||||    
T  22125250 taaggtaagggtgggagtaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattgga-aatta 22125152  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  22125151 gggttaagagtgataattg 22125133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 42314734 - 42314796
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgatt 104  Q
    |||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42314734 ccttgcaatccatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgatt 42314796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 20453635 - 20453736
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaat 156  Q
    |||||||||||||| || |||||||||||  |||| || |||||||||||| ||||  |||||||||| |||||||| ||||||||||||||||| ||||    
T  20453635 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattttgataattagatttaacatgctgtaggttatagtttttgagaatttgggaat 20453734  T
Q  157 ta 158  Q
    ||    
T  20453735 ta 20453736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 48521464 - 48521353
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| |||||||||||  |||| || || ||||| ||| ||||  ||||||||||||| |||||||| ||||||||||| |||||||    
T  48521464 ttaaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaacatgttggaggtttag-ttttgagaattggagaatt 48521366  T
Q  158 agagttaagagtga 171  Q
    || |||||||||||    
T  48521365 ag-gttaagagtga 48521353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 34770677 - 34770621
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtct 98  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  34770677 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtct 34770621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 20959081 - 20958963
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagt-ttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||| ||||||||| |||||||||||| | ||||    
T  20959081 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgaaggtttagttttttgagaattt-aaaatt 20958983  T
Q  158 agagttaagagtgatgattg 177  Q
    || |||||||||||| ||||    
T  20958982 agggttaagagtgataattg 20958963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 164
Target Start/End: Complemental strand, 22350768 - 22350663
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||| |||||||||  ||||| ||||||| ||||||||| |||||||| |||||||||| ||| ||||| ||||||| |||||    
T  22350768 taaggtaagggtgggactaaccttcaataattctgagtatatgattctgaaaattgaatttaacaagttgtaggttgtag-ttttgggaatttgggaatt 22350670  T
Q  158 agagtta 164  Q
    || ||||    
T  22350669 agggtta 22350663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 43630215 - 43630266
Alignment:
Q  172 tgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  43630215 tgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 43630266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 47191554 - 47191436
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| ||||||||| |  |||| || |||||||| |||  |||  ||||||||||||||||| |||||||| ||||||| || |||     
T  47191554 ttaaggtaagggtgggactaacattcagttttcttaagcctatgattctgatgattagatttaacatgttgtaggattagttttggagaattgga-aatc 47191456  T
Q  158 agagttaagagtgatgattg 177  Q
    || |||||||||||| ||||    
T  47191455 agggttaagagtgataattg 47191436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 16382099 - 16381981
Alignment:
Q  47 caattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgaga 146  Q
    |||| |||| |||||||||||||||||| || ||||||||  | || ||||| | |||   |   ||||||||||||||||||||| ||||||||||||     
T  16382099 caatcgattccttaaggtaagggtgggactagcattcaattctattaagtctgtaattcatatggttgtatttaacatgttgtaggattagtttttgagg 16382000  T
Q  147 atttgagaattagagttaa 165  Q
    ||||||||||||| |||||    
T  16381999 atttgagaattagggttaa 16381981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 21708202 - 21708126
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    ||||||||||||||||| |||| |||||||||  ||||| | | ||| ||||||||| |||||||||||||||||||    
T  21708202 ttaaggtaagggtgggactaaccttcaataattctgagtatgtaattctgaaaattggatttaacatgttgtaggtt 21708126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 21712745 - 21712669
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    ||||||||||||||||| |||| |||||||||  ||||| | | ||| ||||||||| |||||||||||||||||||    
T  21712745 ttaaggtaagggtgggactaaccttcaataattctgagtatgtaattctgaaaattggatttaacatgttgtaggtt 21712669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 16401651 - 16401600
Alignment:
Q  172 tgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  16401651 tgattgtgatgattttgaatgaaagtgaagttgaataatatagattgctttt 16401600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 52940022 - 52940144
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    |||||||||||||| ||| || |||||||||||  |||| || || | ||| |||  |||  ||||||||||||||||| ||||||||||| |||| ||     
T  52940022 tttcttaaggtaagagtgagactaacattcaatcttcttaagcctttaattctgatgattagatttaacatgttgtagggttagtttttgataattgga- 52940120  T
Q  154 aattagagttaagagtgatgattg 177  Q
    |||||| |||||||||||| ||||    
T  52940121 aattagggttaagagtgataattg 52940144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 13880537 - 13880619
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||||||| |||||||||||  |||| || || ||||| ||| ||||  ||||||||||||| |||||||||||    
T  13880537 ttaaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaacatgttggaggtttagttt 13880619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 14801442 - 14801360
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||||||| ||||||| |||||||||||  |||| || || ||||| ||| ||||| ||||| ||||||||||||||||||||    
T  14801442 taaggtaaaggtgggactaacattcaatcttcttaagcctgtgattctgataattgcatttagcatgttgtaggtttagtttt 14801360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 14810316 - 14810234
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||||||| ||||||| |||||||||||  |||| || || ||||| ||| ||||| ||||| ||||||||||||||||||||    
T  14810316 taaggtaaaggtgggactaacattcaatcttcttaagcctgtgattctgataattgcatttagcatgttgtaggtttagtttt 14810234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 51477045 - 51476975
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgt 129  Q
    |||||||||||||||| |||| || |||||| |||||| ||||||| ||||||||| |||||||| |||||    
T  51477045 taaggtaagggtgggactaacctttaataattttgagtatatgattctgaaaattgaatttaacaggttgt 51476975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 21683955 - 21683858
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatt 149  Q
    ||||| |||||||||||||| || |||||||||||  |||| ||||||| ||| |||   ||  ||||||||  ||||||| ||||||||||||||||    
T  21683955 gatttgttaaggtaagggtgagactaacattcaattttcttaagtctataattctgatggttagatttaacaacttgtagggttagtttttgagaatt 21683858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 11946493 - 11946418
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    |||||||||||||| || || |||||| | ||||| ||||||| ||| ||||| ||| |||||||||||||||||||    
T  11946493 ttaaggtaagggtgagactatcattcagtgatcttaagtctataattctgaaa-ttggatttaacatgttgtaggtt 11946418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 45755532 - 45755471
Alignment:
Q  98 tatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaattag 159  Q
    ||||||| |||||| || |||||||| |||||||||| ||||||| |||||||||||||||||    
T  45755532 tatgattctgaaaagtggatttaacaagttgtaggttgtagtttt-gagaatttgagaattag 45755471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 21995664 - 21995758
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgaga 154  Q
    |||| ||||||||||| |||| ||||||||| |||||| | ||||| |||| | || ||||||||| |||||||||| || |||| |||||||||||    
T  21995664 taagataagggtgggactaaccttcaataattttgagtatgtgattctgaaga-tgaatttaacatggttgtaggttgaggtttt-agaatttgaga 21995758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 42 - 222
Target Start/End: Complemental strand, 8941333 - 8941153
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8941333 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 8941234  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgcttt 222  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  8941233 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgcttt 8941153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 44 - 223
Target Start/End: Original strand, 45846750 - 45846929
Alignment:
Q  44 ttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttg 143  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45846750 ttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctctgattttgaaaattgtatttaacatgttgtaggtttagtttttg 45846849  T
Q  144 agaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  45846850 agaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 45846929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 8469401 - 8469220
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8469401 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataattttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 8469302  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  8469301 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataagttgctttt 8469220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 14269067 - 14269248
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14269067 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgctgtaggtttagtttt 14269166  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  14269167 tgagaatttgagaattagggttaagggtgatgattgtgatgattttgaatgaaagtgaagttgaataatatagggtgctttt 14269248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 11973196 - 11973033
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11973196 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 11973097  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  11973096 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 11973033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 23461632 - 23461793
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23461632 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 23461731  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgc 219  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  23461732 agggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgc 23461793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 15081169 - 15081326
Alignment:
Q  66 agggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaa 165  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15081169 agggtgggactaacattcaataatcttgagtctatgattcttaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagggttaa 15081268  T
Q  166 gagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15081269 gagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 15081326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 16214526 - 16214362
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  16214526 taaggtaagggtgggattaatattcaataatcttgagtctatgattctgaaaattgtatttaacatcttgtaggtttagtttttgagaatttgagaatca 16214427  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  16214426 gggttaagagtgatgattgtgatgattttgaatgaaagtgatgttgaataatataggttgctttt 16214362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 21188926 - 21189089
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21188926 aaggtaagggtgggactaacatttaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttttttagaatttgagaattag 21189025  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  21189026 ggttaagattgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 21189089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 5294432 - 5294571
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5294432 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 5294531  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtg 198  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  5294532 gggttaagagtgatgattgtgatgattttgaatgaaagtg 5294571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 14317516 - 14317679
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14317516 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttattttttgagaatttgagaatta 14317615  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  14317616 g-gttaagagtgacgattgtgatgattttgaatgaaagtgaagttgaataatataggttgttttt 14317679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 5295605 - 5295744
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5295605 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtaattaacatgttgtaggtttagtttttgagaatttgagaatta 5295704  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtg 198  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  5295705 gggttaagagtgatgattgtgatgattttgaatgaaagtg 5295744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 5296778 - 5296917
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5296778 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtaattaacatgttgtaggtttagtttttgagaatttgagaatta 5296877  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtg 198  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  5296878 gggttaagagtgatgattgtgatgattttgaatgaaagtg 5296917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 38897549 - 38897712
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||| ||||| || ||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  38897549 taaggtaggggtgagactaacatt-aataatcttgagtctatgattctgaaaattgtatttaacaagttgtaggtttagtttttgagaatttcagaatta 38897647  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  38897648 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 38897712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 9945010 - 9945141
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9945010 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 9945109  T
Q  159 gagttaagagtgatgattgtgatgattttgaa 190  Q
    | ||||||||||||||||||||||||||||||    
T  9945110 gggttaagagtgatgattgtgatgattttgaa 9945141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 26355194 - 26355321
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26355194 taaggtaagggtgggactaacattcaataatcttgagtctatgattccgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgggaatta 26355293  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||| |||||| ||| ||||||||||    
T  26355294 gggttaaaagtgattatt-tgatgatttt 26355321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 26357646 - 26357773
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26357646 taaggtaagggtgggactaacattcaataatcttgagtctatgattccgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgggaatta 26357745  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||| |||||| ||| ||||||||||    
T  26357746 gggttaaaagtgattatt-tgatgatttt 26357773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 11392516 - 11392642
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  11392516 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaaca-gttgtaggtatagtttttgagaatttgggaatta 11392614  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||| |||||| ||| ||||||||||    
T  11392615 gggttaaaagtgattatt-tgatgatttt 11392642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 14156392 - 14156510
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||||||||    
T  14156392 taaggtaagggtgggactatcattcaataatcttgagtctatgattctgaaaattttatttgacatgttgtaggtttagtctttgagaattggagaatta 14156491  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  14156492 gggttaagagtgataattg 14156510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 27217809 - 27217682
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  27217809 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggtttagtttttgagaatttgggaatta 27217710  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||| |||||| ||| ||||||||||    
T  27217709 gggttaaaagtgattatt-tgatgatttt 27217682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 18431661 - 18431533
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  18431661 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattttacatgttgtaggttttagtttttgagaatttgagaatt 18431562  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    |||||||| |||||| ||| ||||||||||    
T  18431561 agagttaaaagtgattatt-tgatgatttt 18431533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 457271 - 457143
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  457271 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 457172  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  457171 agggttaaaagtgattatt-tgatgatttt 457143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 15375927 - 15376055
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  15375927 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 15376026  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  15376027 agggttaaaagtgattatt-tgatgatttt 15376055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 20384337 - 20384465
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  20384337 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 20384436  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  20384437 agggttaaaagtgattatt-tgatgatttt 20384465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 10500735 - 10500852
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| || |||||||||||||||||||||||||| ||||||||  |||| ||||||| |||||||||||||||||||||  |||||||    
T  10500735 taaggtaagggtgggactatcattcaataatcttgagtctatgattctgaaaatttcatttgacatgtt-taggtttagtttttgagaattgaagaatta 10500833  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  10500834 gggttaagagtgataattg 10500852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 13870294 - 13870166
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| || |||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  13870294 taaggtaagggtgggactagcattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 13870195  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  13870194 agggttaaaagtgattatt-tgatgatttt 13870166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 16411008 - 16410880
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||  |||||    
T  16411008 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaattttggaatt 16410909  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  16410908 agggttaaaagtgattatt-tgatgatttt 16410880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 18628514 - 18628386
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  18628514 taaggtaagggtgggaataacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 18628415  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| | |||| ||| ||||||||||    
T  18628414 agggttaaaaatgattatt-tgatgatttt 18628386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 16580668 - 16580541
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatta 158  Q
    ||||||||||| ||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||    
T  16580668 aaggtaagggttggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttggaaatta 16580569  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    ||||||| |||||| ||| ||||||||||    
T  16580568 gagttaaaagtgattatt-tgatgatttt 16580541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 16233471 - 16233342
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttg-aaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaat 156  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| || ||||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  16233471 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaat 16233372  T
Q  157 tagagttaagagtgatgattgtgatgatttt 187  Q
    ||| ||||| |||||| ||| ||||||||||    
T  16233371 tagggttaaaagtgattatt-tgatgatttt 16233342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 18641220 - 18641092
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||||| |||||||||| ||||||||||||||||||| |||||    
T  18641220 taaggtaagggtgggaataacattcaataatcttaagtcattgattctgaaaattggatttaatatgttgtaggttttagtttttgagaatttgggaatt 18641121  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| | |||| ||| ||||||||||    
T  18641120 agggttaaaaatgattatt-tgatgatttt 18641092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 16460036 - 16460163
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatta 158  Q
    ||||||||||| ||| |||||||||| |||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  16460036 aaggtaagggttggactaacattcaacaatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatta 16460135  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||| |||||| ||| ||||||||||    
T  16460136 gggttaaaagtgattatt-tgatgatttt 16460163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 41523868 - 41523756
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||   |||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  41523868 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 41523769  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  41523768 agggttaaaagtg 41523756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 32126439 - 32126325
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||  |||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  32126439 taaggtaagggtgggacaaacattcaataatcttaagtcattgattctaaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 32126340  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  32126339 agggttaaaagtgat 32126325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 41526327 - 41526218
Alignment:
Q  62 ggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaattaga 160  Q
    ||||||||||||| ||||||||||||||||| ||||   |||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||     
T  41526327 ggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagg 41526228  T
Q  161 gttaagagtg 170  Q
    ||||| ||||    
T  41526227 gttaaaagtg 41526218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 14948333 - 14948445
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtag-gtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||||| || ||||  ||||| ||||||||| ||||||||||||||||  ||| |||||||||||||||||||||    
T  14948333 taaggtaagggtgggactaacattcaataatattaagtcattgattctgaaaattggatttaacatgttgtagcttttcgtttttgagaatttgagaatt 14948432  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  14948433 agggttaaaagtg 14948445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 24703172 - 24703081
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatt 149  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  24703172 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatt 24703081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 24705619 - 24705528
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatt 149  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  24705619 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatt 24705528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 16997149 - 16997027
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| ||||||||| |||| |||      
T  16997149 tttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagttttttagaa-ttgta 16997051  T
Q  154 aattagagttaagagtgatgattg 177  Q
    |||||| |||||||||||| ||||    
T  16997050 aattagggttaagagtgataattg 16997027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 14980665 - 14980781
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttga 152  Q
    ||||||||||||||||||||| |||| |||||||||||||||| | ||||| || |||||| ||||||||| |||||||||| ||||||| || |||| |    
T  14980665 tttcttaaggtaagggtgggactaaccttcaataatcttgagtatgtgattctg-aaattgaatttaacatggttgtaggttgagttttt-aggatttta 14980762  T
Q  153 gaattagagttaagagtga 171  Q
    ||||||| ||||| |||||    
T  14980763 gaattagggttaaaagtga 14980781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 15410141 - 15410257
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttga 152  Q
    ||||||||||||||||||||| |||| |||||||||||||||| | ||||| || |||||| ||||||||| |||||||||| ||||||| || |||| |    
T  15410141 tttcttaaggtaagggtgggactaaccttcaataatcttgagtatgtgattctg-aaattgaatttaacatggttgtaggttgagttttt-aggatttta 15410238  T
Q  153 gaattagagttaagagtga 171  Q
    ||||||| ||||| |||||    
T  15410239 gaattagggttaaaagtga 15410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 38519732 - 38519616
Alignment:
Q  62 ggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagt--ttttgagaatttgagaattag 159  Q
    ||||||||||||| |||||||||||  |||| || |||||||| ||| ||||  ||||| |||||||||||||||||  |||||||||||||| ||||||    
T  38519732 ggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttagcatgttgtaggtttagtttttttgagaatttga-aattag 38519634  T
Q  160 agttaagagtgatgattg 177  Q
     |||||||||||| ||||    
T  38519633 ggttaagagtgataattg 38519616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 42462923 - 42462806
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| ||||||||| |||||| || |||||    
T  42462923 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagttttttagaattgga-aatta 42462825  T
Q  159 gagttaagagtgatgattg 177  Q
      |||||||||||| ||||    
T  42462824 aggttaagagtgataattg 42462806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 20485018 - 20484900
Alignment:
Q  68 ggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaaga 167  Q
    ||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||||| |||||||| ||||   ||||||||||||| || |||| ||||| |    
T  20485018 ggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaatatgttgtaagttttagttttgagaatttgggatttagggttaaaa 20484919  T
Q  168 gtgatgattgtgatgatttt 187  Q
     |||| ||| ||||||||||    
T  20484918 ttgattatt-tgatgatttt 20484900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 151
Target Start/End: Complemental strand, 20488387 - 20488296
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    |||||||||||| || ||||||||||||||||| ||||  ||||| ||||||||| |||||| |||||||| ||||   |||||||||||||    
T  20488387 aaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaatatgttgtaagttttagttttgagaatttg 20488296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 129943 - 130059
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| ||  ||||||| |||  |||  ||||||||||||||| | |||||||||||||||| || |||||    
T  129943 taaggtaagggtgggactaacattcaatc-tcttaagcttatgattctgatgattagatttaacatgttgtatggttagtttttgagaattgga-aatta 130040  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  130041 gggttaagagtgataattg 130059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 18455585 - 18455671
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||||||||||| |||||||||||  |||| ||  ||||||| ||| ||||  ||||||||||||| |||||||||||    
T  18455585 tttcttaaggtaagggtgggactaacattcaatcttcttaagcatatgattctgataattagatttaacatgttggaggtttagttt 18455671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 32302228 - 32302163
Alignment:
Q  108 aaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgatga 174  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||||    
T  32302228 aaaattgtatttaacatgttgtaggtttag-ttttgaggatttgggaattagggttaaaagtgatga 32302163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 14928290 - 14928402
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagt-ctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||||| |||| |||| ||||  | ||| || | ||| |||||||||||||||||||||||||| ||||| ||||||  ||||| ||||||    
T  14928290 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtagatttag-ttttgacgatttgggaatta 14928388  T
Q  159 gagttaagagtgat 172  Q
    ||||||| ||||||    
T  14928389 gagttaaaagtgat 14928402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 15351756 - 15351868
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagt-ctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||||| |||| |||| ||||  | ||| || | ||| |||||||||||||||||||||||||| ||||| ||||||  ||||| ||||||    
T  15351756 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtagatttag-ttttgacgatttgggaatta 15351854  T
Q  159 gagttaagagtgat 172  Q
    ||||||| ||||||    
T  15351855 gagttaaaagtgat 15351868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 171
Target Start/End: Original strand, 9176828 - 9176946
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    |||||||||||||||||||| || || ||||||||  | || ||||| | ||| ||| ||||  |||||||| || ||||| |||||||| |||||||||    
T  9176828 gatttcttaaggtaagggtgagactagcattcaattttattaagtctgtaattctgataattaaatttaacaagt-gtaggattagttttagagaatttg 9176926  T
Q  152 agaattagagttaagagtga 171  Q
    || ||||| |||||||||||    
T  9176927 aggattagggttaagagtga 9176946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 14259398 - 14259334
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||| ||||||    
T  14259398 tgaaaattgtatttaacatgttgta-gtttag-ttttgagaatttgggaattagggttaaaagtgat 14259334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 13893498 - 13893401
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagttttt-gagaatttgagaat 156  Q
    |||||||||||||||| || |||||| | ||||| ||||||||||| || |||||| |||||||||||  |||| |||||||||| ||||||||||||||    
T  13893498 taaggtaagggtgggactatcattcagtgatcttaagtctatgattctg-aaattggatttaacatgt--taggttttagtttttggagaatttgagaat 13893402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 15095637 - 15095737
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||| |||| ||||  | ||| ||||||| ||||||||| |||||||| |||||||||| ||| ||||| ||||||| |||||    
T  15095637 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaacaggttgtaggttgtag-ttttgggaatttgggaatt 15095735  T
Q  158 ag 159  Q
    ||    
T  15095736 ag 15095737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 9724801 - 9724913
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgagaat 156  Q
    ||||||||||||||||| |||| || ||||||||||||| | ||| | || | |||| ||||||||| |||||| ||| || |||| |||||||||||||    
T  9724801 ttaaggtaagggtgggactaaccttaaataatcttgagtatgtgaatctg-atattgaatttaacatggttgtatgttgaggtttt-agaatttgagaat 9724898  T
Q  157 tagagttaagagtga 171  Q
    ||| ||||| |||||    
T  9724899 tagggttaaaagtga 9724913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 11768089 - 11768174
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttga 144  Q
    ||||||||||||||||| |||||||||||  |||| || |||| ||| |||  |||  |||||||||| ||||||||||||||||||    
T  11768089 ttaaggtaagggtgggactaacattcaatcttcttaagcctataattctgatgattagatttaacatg-tgtaggtttagtttttga 11768174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 15203230 - 15203116
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtt-tagtttttgagaatttgagaat 156  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| |||||| || ||||||||| |||||||||| |||||||  |||||||| ||||    
T  15203230 taaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaaaa-tgaatttaacatggttgtaggttgtagtttt--agaatttgggaat 15203134  T
Q  157 tagagttaagagtgatga 174  Q
    ||  ||||| ||||||||    
T  15203133 tacggttaaaagtgatga 15203116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 8135238 - 8135337
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || |||| |||| ||||| | ||| ||||||| || |||||| |||||||| |||||||||| ||||||| | |||||||||||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagtgtatgattctg-aaattgaatttaacaggttgtaggttgtagttttag-gaatttgagaatt 8135335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 11085577 - 11085478
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttga 152  Q
    ||||||||||||||||||||| |||| |||||||||  ||||| | ||||| |||| | || ||||||||| |||||||||| || |||| |||||||||    
T  11085577 tttcttaaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaga-tgaatttaacatggttgtaggttgaggtttt-agaatttga 11085480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 11054765 - 11054690
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    |||||||||||||||| |||| |||||| ||  | ||| | ||||| ||||||||| |||||||| ||||||||||    
T  11054765 taaggtaagggtgggactaaccttcaatgattctaagtgtttgattctgaaaattgaatttaacaggttgtaggtt 11054690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 19485973 - 19486039
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| || |||||| |||||||||||    
T  19485973 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aaattggatttaacatgt 19486039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 37793387 - 37793473
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||||||||||| |||||||||||  |||| || |  | ||| |||  |||  |||||||| ||||||||||||||||    
T  37793387 tttcttaaggtaagggtgggactaacattcaatcttcttaagccgttaattctgatgattagatttaacaagttgtaggtttagttt 37793473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 9032533 - 9032608
Alignment:
Q  76 taacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttga 152  Q
    |||||||||||  |||| || |||||||| |||  |||  |||||||||||  ||||||||||||||||||||||||    
T  9032533 taacattcaattttcttaagcctatgattctgattattagatttaacatgtc-taggtttagtttttgagaatttga 9032608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 155; Significance: 2e-82; HSPs: 5)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 20700 - 20522
Alignment:
Q  45 tgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttga 144  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20700 tgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttga 20601  T
Q  145 gaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  20600 gaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 20522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 43570 - 43416
Alignment:
Q  69 gtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagag 168  Q
    |||||| ||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  43570 gtgggactaacattcaataatcttaagtatatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaattagggttaagag 43471  T
Q  169 tgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||||||||||||||||||  |||||||||||  ||||||||||    
T  43470 tgatgattgtgatgattttgaatgaaagtggagttgaataatatgggttgctttt 43416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 13033 - 13161
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  13033 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttggaaatt 13132  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    ||  |||| |||||| ||| ||||||||||    
T  13133 aggattaaaagtgattatt-tgatgatttt 13161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 14307 - 14213
Alignment:
Q  64 taagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattaga 160  Q
    ||||||||||| |||||||||||  |||| || |||||||| ||| ||||  |||||| |||||||||| |||||||||||||||||| ||||||||    
T  14307 taagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaatatgttgtagg-ttagtttttgagaatttg-gaattaga 14213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 23168 - 23059
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||| | |||||||||||  |||| |  |||||||| ||| ||||  ||||||||||||||||| |||||||||||||||||| ||||||    
T  23168 taaggtaagggtgg-actaacattcaatcttcttaatcctatgattctgataattagatttaacatgttgtagg-ttagtttttgagaatttg-gaatta 23072  T
Q  159 gagttaagagtga 171  Q
    | ||||| |||||    
T  23071 gggttaaaagtga 23059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 18796 - 18615
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18796 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 18697  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18696 tgagaatctgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 18615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 8e-82; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 17027847 - 17028028
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17027847 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 17027946  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17027947 tgagaatctgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 17028028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 42 - 211
Target Start/End: Complemental strand, 25689492 - 25689323
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25689492 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 25689393  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataata 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25689392 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataata 25689323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 25536073 - 25535893
Alignment:
Q  43 cttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttttt 142  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25536073 cttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttttt 25535974  T
Q  143 gagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  25535973 gagaatttgagaattatggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 25535893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 34964025 - 34963858
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34964025 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 34963926  T
Q  156 ttagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  34963925 ttagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatatgttgctttt 34963858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 18914983 - 18914803
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  18914983 ccttgcaatcaatttcttaaggtaagggtgggactaacattcaataatcttga-tctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 18914885  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18914884 tgagaatttgagaataagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 18914803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 58 - 223
Target Start/End: Original strand, 30676038 - 30676203
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30676038 ttaaggtaagggtgagactaacatgcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 30676137  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  30676138 agagttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 30676203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 31629861 - 31630025
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31629861 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 31629960  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  31629961 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 31630025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 23993074 - 23992907
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23993074 tcttaaggtaagggtgggactaacattcaataatcttgagtctataattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 23992975  T
Q  156 ttagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||    
T  23992974 ttagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaatagtataggttgctttt 23992907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 42 - 197
Target Start/End: Complemental strand, 25721164 - 25721009
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25721164 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 25721065  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagt 197  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25721064 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagt 25721009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 16198447 - 16198295
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16198447 taaggtaagggtgtgactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 16198348  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataata 211  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16198347 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataata 16198295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 1599082 - 1598927
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||        |||||     
T  1599082 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtagatttagtttttgag--------aattat 1598991  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  1598990 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 1598927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 58 - 229
Target Start/End: Complemental strand, 19005991 - 19005823
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| | | | ||| |||  ||  ||||||||||    
T  19005991 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttat-gttataggttt--agtttttgagaatt 19005895  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgcttttgatgat 229  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  19005894 agggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttttatgat 19005823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 25753493 - 25753385
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25753493 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 25753394  T
Q  156 ttagagtta 164  Q
    |||| ||||    
T  25753393 ttagggtta 25753385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 25755663 - 25755555
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25755663 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 25755564  T
Q  156 ttagagtta 164  Q
    |||| ||||    
T  25755563 ttagggtta 25755555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 8055978 - 8055851
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8055978 taaggtaagggtgggactaacattcaataatcttgagtctatgattccgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgggaatta 8055879  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||| |||||| ||| ||||||||||    
T  8055878 gggttaaaagtgattatt-tgatgatttt 8055851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 22783176 - 22783048
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  22783176 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaatt 22783077  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  22783076 agggttaaaagtgattatt-tgatgatttt 22783048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 17882710 - 17882823
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  17882710 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgcatttaacatgttgtaggtttagtttttgagaatttgggaatta 17882809  T
Q  159 gagttaagagtgat 172  Q
    | ||||| ||||||    
T  17882810 gggttaaaagtgat 17882823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 18333806 - 18333934
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  18333806 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 18333905  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  18333906 agggttaaaagtgattatt-tgatgatttt 18333934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 19858136 - 19858264
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  19858136 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaagatgttgtaggttttagtttttgagaatttgagaatt 19858235  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  19858236 agggttaaaagtgattatt-tgatgatttt 19858264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 24423495 - 24423367
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  24423495 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 24423396  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  24423395 agggttaaaagtgattatt-tgatgatttt 24423367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 26923659 - 26923787
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  26923659 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaacatgttgtaggttttagtttttgagaatttgggaatt 26923758  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  26923759 agggttaaaagtgattatt-tgatgatttt 26923787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 33865226 - 33865098
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  33865226 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 33865127  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  33865126 agggttaaaagtgattatt-tgatgatttt 33865098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 19847368 - 19847456
Alignment:
Q  135 tagtttttgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  19847368 tagtttttgagcatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 19847456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 2290392 - 2290520
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgta-ggtttagtttttgagaatttgagaatt 157  Q
    |||||||| ||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  2290392 taaggtaaaggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaacatgttgtagggtttagtttttgagaatttgggaatt 2290491  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  2290492 agggttaaaagtgattatt-tgatgatttt 2290520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 33862745 - 33862633
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  33862745 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgagaatt 33862646  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  33862645 agggttaaaagtg 33862633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 164
Target Start/End: Complemental strand, 18343139 - 18343033
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  18343139 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 18343040  T
Q  158 agagtta 164  Q
    || ||||    
T  18343039 agggtta 18343033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 12743268 - 12743168
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  12743268 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 12743169  T
Q  158 a 158  Q
    |    
T  12743168 a 12743168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 17229064 - 17229181
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| | | ||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  17229064 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctaataattagatttaacatgttgtaggtttagtttttgagaatttga-aatta 17229162  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  17229163 gggttaagagtgataattg 17229181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 1540125 - 1540239
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| ||  |||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  1540125 taaggtaagggtgagacaaacattcaataatcttaagtcattgattctaaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 1540224  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  1540225 agggttaaaagtgat 1540239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 18454179 - 18454067
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| ||  ||||||| ||| ||||  ||||||||||||||||||||| ||||||||||||||| |||||    
T  18454179 taaggtaagggtgggactaacattcaatcttcttaagcatatgattctgataattagatttaacatgttgtaggtttaatttttgagaatttga-aatta 18454081  T
Q  159 gagttaagagtgat 172  Q
    | ||||||||||||    
T  18454080 gggttaagagtgat 18454067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 23527288 - 23527413
Alignment:
Q  47 caattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgaga 146  Q
    |||| ||||||||||||||||||||||| || ||||||||  |||| || || | ||| |||  |||  |||||||||||| |||| ||||||||||||     
T  23527288 caatcgatttcttaaggtaagggtgggactagcattcaattttcttaagcctgtaattctgatgattagatttaacatgttataggattagtttttgagg 23527387  T
Q  147 atttgagaattagagttaagagtgat 172  Q
    ||||||||||||| ||||||||||||    
T  23527388 atttgagaattagggttaagagtgat 23527413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 2077251 - 2077125
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||||| ||| |||| ||||   ||||||||||||| |||||||    
T  2077251 aaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatatgctgtaagttttagttttgagaatttgggaattag 2077152  T
Q  160 agttaagagtgatgattgtgatgatttt 187  Q
     ||||| | |||| ||| ||||||||||    
T  2077151 ggttaaaattgattatt-tgatgatttt 2077125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 20137626 - 20137513
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||| |||||||||| |||||||||||  |||| || |||||||| ||| ||||  |||||||||||||||||||||| ||||||||||||| ||||||    
T  20137626 taaggaaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttag-ttttgagaatttg-gaatta 20137529  T
Q  159 gagttaagagtgatga 174  Q
    | ||||| ||||||||    
T  20137528 gggttaaaagtgatga 20137513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 22195243 - 22195356
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||| |||||||||| |||||||||||  |||| || |||||||| ||| ||||  |||||||||||||||||||||| ||||||||||||| ||||||    
T  22195243 taaggaaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttag-ttttgagaatttg-gaatta 22195340  T
Q  159 gagttaagagtgatga 174  Q
    | ||||| ||||||||    
T  22195341 gggttaaaagtgatga 22195356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 13612432 - 13612331
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||| |||||||||||| ||||| |||||  || | ||||| | ||| ||| ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  13612432 ttaatgtaagggtgggactaacaatcaattctcctaagtctgtaattctgataattgtatttaacatgttgtaggtttagtttttgataattggagaatt 13612333  T
Q  158 ag 159  Q
    ||    
T  13612332 ag 13612331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 18697487 - 18697383
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| || ||||||||  |||| || |||||||| ||| ||||  ||||||||||||| |||||||| ||||||||||| |||    
T  18697487 tttcttaaggtaagggtgggactagcattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttag-ttttgagaattggag 18697389  T
Q  154 aattag 159  Q
    ||||||    
T  18697388 aattag 18697383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 23077682 - 23077575
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    |||||||||||||||| |||||| || ||||||||  | || ||||| ||||| | |   ||||||||||||||||||||| ||||||||||||||||||    
T  23077682 gatttcttaaggtaagagtgggactagcattcaattctattaagtctgtgattctaatggttgtatttaacatgttgtaggattagtttttgagaatttg 23077583  T
Q  152 agaattag 159  Q
    | ||||||    
T  23077582 ataattag 23077575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 19003530 - 19003468
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtattta 120  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||| |||||||||||||||    
T  19003530 ttaaggtaagggtgaaactaacattcaataatcttgagtctatgattctgaaaattgtattta 19003468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 18707238 - 18707134
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| || ||||||||  |||| || | |||||| ||| ||||  ||||||||||||| |||||||| ||||||||||| |||    
T  18707238 tttcttaaggtaagggtgggactagcattcaatcttcttaagcccatgattctgataattagatttaacatgttggaggtttag-ttttgagaattggag 18707140  T
Q  154 aattag 159  Q
    ||||||    
T  18707139 aattag 18707134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 25739373 - 25739249
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagttttt-gagaatttgagaat 156  Q
    |||||||||||||||| || |||||| | ||||| ||||||||||| || |||||| |||||||||||  |||| |||||||||| ||||||||||||||    
T  25739373 taaggtaagggtgggactatcattcagtgatcttaagtctatgattctg-aaattggatttaacatgt--taggttttagtttttggagaatttgagaat 25739277  T
Q  157 tagagttaagagtgatgattgtgatgatt 185  Q
    ||| ||||| |||||| ||| ||||||||    
T  25739276 tagggttaaaagtgataatt-tgatgatt 25739249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 18895485 - 18895594
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||| || |||||||||||  |||| || |||||||||||   |||  |||||||| |||||||| |||||||||||||||| || ||||    
T  18895485 ttaaggtaagggtgagactaacattcaattttcttaagcctatgattttg---attagatttaacaagttgtaggattagtttttgagaattgga-aatt 18895580  T
Q  158 agagttaagagtga 171  Q
    || |||||||||||    
T  18895581 agggttaagagtga 18895594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 19363422 - 19363301
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||| |||||||||||||| || |||||||||||  |||| || |||||||| |||   ||  ||||||||||||||||| |||||||| ||||||| |    
T  19363422 gatttgttaaggtaagggtgagactaacattcaattttcttaagcctatgattctga---ttagatttaacatgttgtaggattagttttggagaattgg 19363326  T
Q  152 agaattagagttaagagtgatgattg 177  Q
    | |||||| ||||||||||| |||||    
T  19363325 a-aattagggttaagagtgaggattg 19363301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 19401147 - 19401046
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaat 156  Q
    ||||||||||||||||| |||| |||| ||||  | ||| ||||||| ||||||||| |||||||| |||||||||| ||| ||||| ||||||||||||    
T  19401147 ttaaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaacaggttgtaggttgtag-ttttgggaatttgagaat 19401049  T
Q  157 tag 159  Q
    |||    
T  19401048 tag 19401046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 19772714 - 19772779
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||    
T  19772714 tgaaaattgtatttaacatgttgtaggtttag-ttttgaggatttgggaattagggttaaaagtgat 19772779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 14978542 - 14978624
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||||||| |||||||||||  |||| || || ||||| ||| ||||  ||||||||||||| |||||||||||    
T  14978542 ttaaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaacatgttggaggtttagttt 14978624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 20183772 - 20183657
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagttttt-gagaatttgagaat 156  Q
    |||||||||||||||| || |||||| || |||| ||||||||||||   |||||| |||||||||||  |||| |||||||||| ||| ||||||| ||    
T  20183772 taaggtaagggtgggactatcattcagtactcttaagtctatgatttctgaaattggatttaacatgt--taggttttagtttttcgaggatttgaggat 20183675  T
Q  157 tagagttaagagtgatga 174  Q
    ||| ||||| ||||||||    
T  20183674 tagggttaaaagtgatga 20183657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 22152219 - 22152334
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagttttt-gagaatttgagaat 156  Q
    |||||||||||||||| || |||||| || |||| ||||||||||||   |||||| |||||||||||  |||| |||||||||| ||| ||||||| ||    
T  22152219 taaggtaagggtgggactatcattcagtactcttaagtctatgatttctgaaattggatttaacatgt--taggttttagtttttcgaggatttgaggat 22152316  T
Q  157 tagagttaagagtgatga 174  Q
    ||| ||||| ||||||||    
T  22152317 tagggttaaaagtgatga 22152334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 25618899 - 25618981
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||||||| |||||||||||  |||| || || ||||| ||| ||||  ||||||||||||| |||||||||||    
T  25618899 ttaaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaacatgttggaggtttagttt 25618981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 35012120 - 35012023
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatt 149  Q
    ||||||||||||||||||||||  ||  |||||||  | || |||||| |||| |||   |||||||||||| |||||||| ||||||||||||||||    
T  35012120 gatttcttaaggtaagggtggggctagaattcaattctattaagtctacgattctgatggttgtatttaacaggttgtaggattagtttttgagaatt 35012023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 22375800 - 22375911
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtt-tagtttttgagaatttgagaat 156  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| || |||||| ||||||||| ||||||||||  ||||||  |||||||||||||    
T  22375800 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctg-aaattgaatttaacatggttgtaggttggagtttt--agaatttgagaat 22375896  T
Q  157 tagagttaagagtga 171  Q
    ||| ||||| |||||    
T  22375897 tagggttaaaagtga 22375911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 22806743 - 22806678
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||| |||| || ||||| ||||||    
T  22806743 tgaaaattatatttaacatgttgtaggtttag-ttttgaggatttgggaataagggttaaaagtgat 22806678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 8226740 - 8226806
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| || |||||| |||||||||||    
T  8226740 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aaattggatttaacatgt 8226806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 23531896 - 23531962
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| || |||||| |||||||||||    
T  23531896 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aaattggatttaacatgt 23531962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 136
Target Start/End: Original strand, 15704613 - 15704642
Alignment:
Q  107 gaaaattgtatttaacatgttgtaggttta 136  Q
    ||||||||||||||||||||||||||||||    
T  15704613 gaaaattgtatttaacatgttgtaggttta 15704642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 23415957 - 23415908
Alignment:
Q  55 ttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgatt 104  Q
    |||||||||||||||||||| |||||||||||  |||| || ||||||||    
T  23415957 ttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgatt 23415908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 16246270 - 16246176
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgaga 154  Q
    |||||||||||||||| |||| |||||||||  ||||| | | ||| | ||||||| ||||||||| ||||||| || ||||||| |||||||||||    
T  16246270 taaggtaagggtgggactaaccttcaataattatgagtttctaattct-aaaattgaatttaacatggttgtagattgagttttt-agaatttgaga 16246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 8e-82; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 17516273 - 17516454
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  17516273 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttattttt 17516372  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17516373 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 17516454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 58 - 223
Target Start/End: Original strand, 2153951 - 2154116
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2153951 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 2154050  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  2154051 agggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 2154116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 20917168 - 20917331
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20917168 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaattag 20917267  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  20917268 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatgggttgctttt 20917331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 32028866 - 32028703
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||| || || ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32028866 aaggtaaggatgagactaacattcaataatcttgagtttatgattctgaaaattgtatttaacatgttgtagttttagtttttgagaatttgagaattag 32028767  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     |||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  32028766 ggttaagagtggtgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 32028703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 24473933 - 24473792
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24473933 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 24473834  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatga 183  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  24473833 tgagaatttgagaattagggttaagagtgatgattgtgatga 24473792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 29330832 - 29330698
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29330832 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 29330733  T
Q  142 tgagaatttgagaattagagttaagagtgatgatt 176  Q
    |||||||||||||||||| ||| ||||||||||||    
T  29330732 tgagaatttgagaattagggttcagagtgatgatt 29330698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 295603 - 295759
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||| ||| || ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||        |||||||||||    
T  295603 taaggtaagagtgagactaacattcaataatctttagtctatgattctgaaaattgtatttaatatgttgtaggtttagtt--------tttgagaatta 295694  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  295695 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataagttgctttt 295759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 38620384 - 38620256
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  38620384 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgagaatt 38620285  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  38620284 agggttaaaagtgattatt-tgatgatttt 38620256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 39246084 - 39245956
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  39246084 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 39245985  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || || || |||||| ||| ||||||||||    
T  39245984 agggtcaaaagtgattatt-tgatgatttt 39245956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 39364332 - 39364204
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||| ||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  39364332 taaggtaagggtgggactaacattcaataaccttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttggaaatt 39364233  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  39364232 agggttaaaagtgattatt-tgatgatttt 39364204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 29346929 - 29346817
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  29346929 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgggaatt 29346830  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  29346829 agggttaaaagtg 29346817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 29349402 - 29349290
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  29349402 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgggaatt 29349303  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  29349302 agggttaaaagtg 29349290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 29351875 - 29351763
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  29351875 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgggaatt 29351776  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  29351775 agggttaaaagtg 29351763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 42244576 - 42244688
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||||| |||||||||| ||| |||||||||||||||||||||    
T  42244576 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatatgttgtaggttttcgtttttgagaatttgagaatt 42244675  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  42244676 agggttaaaagtg 42244688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 20909963 - 20909850
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggttt--agtttttgagaatttgagaat 156  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||||||    |||||||||||||||||||    
T  20909963 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgttttttgagaatttgagaat 20909864  T
Q  157 tagagttaagagtg 170  Q
    ||| ||||| ||||    
T  20909863 tagggttaaaagtg 20909850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 263982 - 264094
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  263982 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgaaaatttgagaatt 264081  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  264082 agggttaaaagtg 264094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 40723459 - 40723566
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaat 156  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||||||| ||||  |||||||||||||| |||| ||||||||||||||||| ||||    
T  40723459 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattttgataattaaatttaacatgttgttggttatagtttttgagaatttgggaat 40723558  T
Q  157 tagagtta 164  Q
    ||||||||    
T  40723559 tagagtta 40723566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 164
Target Start/End: Complemental strand, 23065464 - 23065358
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||| |||  ||||    
T  23065464 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaaattggaaatt 23065365  T
Q  158 agagtta 164  Q
    || ||||    
T  23065364 agggtta 23065358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 10732151 - 10732263
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||| | ||||  ||||| ||||||||  ||||||||||||||||| ||| |||||||||||||||||||||    
T  10732151 taaggtaagggtgagactaacattcaataatcctaagtcattgattatgaaaattagatttaacatgttgtaggttttcgtttttgagaatttgagaatt 10732250  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  10732251 agggttaaaagtg 10732263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 41860581 - 41860681
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||  |||| || |||||||||||| ||||  |||||| |||||||||||| |||||||||||||||||||||||    
T  41860581 taaggtaagggtgggactaacattcaatcttcttaagcctatgattttgataattagatttaa-atgttgtaggttatagtttttgagaatttgagaatt 41860679  T
Q  158 ag 159  Q
    ||    
T  41860680 ag 41860681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 14049040 - 14048940
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||| |||||  |||| || || | ||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  14049040 taaggtaagggtgggattaacaatcaattctcttaagcctgtaattctgataattgtatttaacatgttgtaggtttagtttttgaaaattggagaatta 14048941  T
Q  159 g 159  Q
    |    
T  14048940 g 14048940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 41094818 - 41094918
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||| |||||  |||| || || | ||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41094818 taaggtaagggtgagactaacaatcaattctcttaagcctgtaattctgataattgtatttaacatgttgtaggtttagtttttgagaattggagaatta 41094917  T
Q  159 g 159  Q
    |    
T  41094918 g 41094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 15797405 - 15797281
Alignment:
Q  47 caattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgaga 146  Q
    |||| |||| |||||||||||||||||| || || |||||  |||| || || | ||| ||| | |||||||||||||||||||||  ||||||||||||    
T  15797405 caatcgattccttaaggtaagggtgggactagcactcaattttcttaagcctctaattctgatagttgtatttaacatgttgtaggactagtttttgaga 15797306  T
Q  147 atttgagaattagagttaagagtga 171  Q
    |||| |||||| | |||||||||||    
T  15797305 atttaagaattcgggttaagagtga 15797281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 23470744 - 23470626
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttttt-gagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| ||||||||| ||||||| || ||||    
T  23470744 taaggtaagggtgggaataacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttggagaattgga-aatt 23470646  T
Q  158 agagttaagagtgatgattg 177  Q
    || |||||||||||| ||||    
T  23470645 agggttaagagtgataattg 23470626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 23476456 - 23476337
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttttt--gagaatttgagaat 156  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| | |  |||  ||||||||||||||||| |||||||||  |||||||||| |||    
T  23476456 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctaatgattagatttaacatgttgtagggttagttttttggagaatttga-aat 23476358  T
Q  157 tagagttaagagtgatgattg 177  Q
    ||| |||||||||||| ||||    
T  23476357 tagggttaagagtgataattg 23476337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 26739788 - 26739908
Alignment:
Q  50 ttgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatt 149  Q
    ||||||| |||||||||||||| || |||||||||||  |||| ||||| | ||| |||  |||  |||||||| ||||||||||||| |||||||||||    
T  26739788 ttgatttgttaaggtaagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaagttgtaggtttag-ttttgagaatt 26739886  T
Q  150 tgagaattagagttaagagtga 171  Q
     || |||||| |||||||||||    
T  26739887 ggaaaattagggttaagagtga 26739908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 20901325 - 20901377
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaa 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  20901325 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaa 20901377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 25573572 - 25573694
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    |||||| | |||||||||||| |||||||||||  |||| |  |||||||| |||  |||  ||||||||||||||||| |||||||||||||||| ||     
T  25573572 tttcttcacgtaagggtgggactaacattcaatcttcttaatcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattgga- 25573670  T
Q  154 aattagagttaagagtgatgattg 177  Q
    |||||| | |||||||||| ||||    
T  25573671 aattagggctaagagtgatcattg 25573694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 25574817 - 25574929
Alignment:
Q  64 taagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagtt 163  Q
    ||||||||||| |||||||||||  |||| || ||||| || |||  | |  ||||||||||||||||| |||||||||||||||| || |||||||| |    
T  25574817 taagggtgggactaacattcaatcttcttaagcctatggttctgatgaatagatttaacatgttgtagggttagtttttgagaattgga-aattagagct 25574915  T
Q  164 aagagtgatgattg 177  Q
    ||||||||| ||||    
T  25574916 aagagtgatcattg 25574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 25576010 - 25576122
Alignment:
Q  64 taagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagtt 163  Q
    ||||||||||| |||||||||||  |||| || |||||||| |||  | |  ||||||||||||||||| |||||||||||||||| || |||||| | |    
T  25576010 taagggtgggactaacattcaatcttcttaagcctatgattctgatgaatagatttaacatgttgtagggttagtttttgagaattgga-aattagggct 25576108  T
Q  164 aagagtgatgattg 177  Q
    ||||||||| ||||    
T  25576109 aagagtgatcattg 25576122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 22413138 - 22413056
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||||||| |||||||||||  | || || |||||||| ||| ||||  ||||||||||||| |||||||||||    
T  22413138 ttaaggtaagggtgggactaacattcaatctttttaagcctatgattctgataattagatttaacatgttggaggtttagttt 22413056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 26731989 - 26732095
Alignment:
Q  64 taagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagtt 163  Q
    |||||||| || |||||||||||  |||| ||||| | ||| |||  |||  |||||||| ||||||||||||| ||||||||||| || |||||| |||    
T  26731989 taagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaagttgtaggtttag-ttttgagaattggaaaattagggtt 26732087  T
Q  164 aagagtga 171  Q
    ||||||||    
T  26732088 aagagtga 26732095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 31062293 - 31062196
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||  |||||||||||||  |||| || |||||||| ||| ||||  ||||||||||||| || ||||| |||||||||||  |||||||    
T  31062293 taaggtaagggtg--agtaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggagatttag-ttttgagaattgaagaatta 31062197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 21914492 - 21914564
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtag 131  Q
    |||||||||||||||| |||| |||||||||  ||||| | | ||| ||||||||| |||||||| |||||||    
T  21914492 taaggtaagggtgggactaaccttcaataattctgagtatgtaattctgaaaattggatttaacaagttgtag 21914564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 10774664 - 10774731
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    |||||||||||||||| |||| |||| ||||  | ||| ||||||| ||||||||| |||||||||||    
T  10774664 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaacatgt 10774731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 21405628 - 21405703
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    ||||||||||||| || |||| || ||||||  ||||| ||||||| ||||||||| |||||||| ||||| ||||    
T  21405628 taaggtaagggtgagactaacctttaataattctgagtatatgattctgaaaattgaatttaacaggttgtgggtt 21405703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 40726732 - 40726666
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| || |||||| |||||||||||    
T  40726732 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aaattggatttaacatgt 40726666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 31251891 - 31251991
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaat 156  Q
    |||||||||||||| || || |||||| | ||||| ||||||| ||| || |||||| |||||||| ||| |||||| ||||||| | ||||||||||||    
T  31251891 ttaaggtaagggtgagactatcattcagtgatcttaagtctataattctg-aaattggatttaacaggttataggttgtagttttag-gaatttgagaat 31251988  T
Q  157 tag 159  Q
    |||    
T  31251989 tag 31251991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 20572818 - 20572731
Alignment:
Q  53 atttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||||||||||||| || |||||||||||  |  | || |||||||| |||  |||  |||||||||| |||||||||||||||    
T  20572818 atttcttaaggtaagggtgagactaacattcaattttggtaagcctatgattctgatgattagatttaacatg-tgtaggtttagtttt 20572731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 1567 - 1386
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1567 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttat 1468  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  1467 tgagaatttgagaattatggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatatgttgctttt 1386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 11361376 - 11361195
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11361376 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctaaaaattgtatttaacatgttgtaggtttagtttt 11361277  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  11361276 tgagaatttgagaattaaggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 11361195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 27471737 - 27471901
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471737 taaggtaagggtgggactaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 27471836  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  27471837 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 27471901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 16412632 - 16412799
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16412632 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 16412731  T
Q  156 ttagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  16412732 ttagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 16412799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 19897356 - 19897192
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19897356 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 19897257  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||    
T  19897256 gagttaagagtgatgattgttatgattttgaatgaaagtgaagttgaataatataggttgctttt 19897192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 38549116 - 38549297
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  38549116 ccttgcaatcgatttcttaaggtaagggttggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtgggtttagtttt 38549215  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  38549216 tgagaatttgagaattaggcttaaaagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 38549297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 20457520 - 20457356
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20457520 taaggtaagggtgggactaacattcaataatcttgagtctatgatcctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 20457421  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  20457420 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 20457356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 32122570 - 32122406
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32122570 taaggtaagggtggaactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 32122471  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  32122470 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 32122406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 59 - 229
Target Start/End: Complemental strand, 24049452 - 24049282
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24049452 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattatatttaacatgttgtaggtttagtttttgagaatttgagaatta 24049353  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgcttttgatgat 229  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||    
T  24049352 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgttttttatgat 24049282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 58 - 223
Target Start/End: Original strand, 1326444 - 1326609
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1326444 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 1326543  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    || ||||||||||||||||||||||||||||||||||||| |  |||||||||| |||||||||||    
T  1326544 agggttaagagtgatgattgtgatgattttgaatgaaagtaaaattgaataatataggttgctttt 1326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 20404120 - 20403957
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20404120 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgataattgtatttaacatgttgtaggtttagtttttgagaattttagaattag 20404021  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  20404020 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatagattgctttt 20403957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 15202306 - 15202470
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15202306 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaatta 15202405  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||| |||| |||||||||||| |||||||||||  ||||||||||    
T  15202406 gggttaagagtgatgattgtgattatttagaatgaaagtgaagttgaataatatgggttgctttt 15202470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 37609722 - 37609886
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37609722 taaggtaagggtgagactaacattcaataatcttgagtctatgattctaaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 37609821  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | |||||| |||||||||||||||||||||||| | ||||| ||||||||||| |||||||||||    
T  37609822 gggttaagggtgatgattgtgatgattttgaataagagtgaagttgaataatataggttgctttt 37609886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 32810536 - 32810381
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32810536 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 32810437  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||         |||||||||||||||||| ||||||||||| |||||||||||    
T  32810436 gggttaagagtgat---------gattttgaatgaaagtgaagttgaataatataggttgctttt 32810381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 5852507 - 5852634
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  5852507 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaatcgtatttaacatgttgtaggtttagtttttgagaatttgggaatta 5852606  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||  |||||| ||| ||||||||||    
T  5852607 gggttacaagtgattatt-tgatgatttt 5852634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 24485254 - 24485368
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||    
T  24485254 taaggtaagggtgggactaacatttaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttaggaatt 24485353  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  24485354 agggttaaaagtgat 24485368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 45289760 - 45289875
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgta-ggtttagtttttgagaatttgagaat 156  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  45289760 ttaaggtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacatgttgtagggtttagtttttgagaatttgggaat 45289859  T
Q  157 tagagttaagagtgat 172  Q
    ||| ||||| ||||||    
T  45289860 tagggttaaaagtgat 45289875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 1485350 - 1485222
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  1485350 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 1485251  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  1485250 agggttaaaagtgattatt-tgatgatttt 1485222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 4484228 - 4484100
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  4484228 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 4484129  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  4484128 agggttaaaagtgatcatt-tgatgatttt 4484100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 14408658 - 14408786
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  14408658 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 14408757  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  14408758 agggttaaaagtgattatt-tgatgatttt 14408786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 14824724 - 14824596
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  14824724 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 14824625  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  14824624 agggttaaaagtgattatt-tgatgatttt 14824596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 18677276 - 18677404
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  18677276 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgggaatt 18677375  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  18677376 agggttaaaagtgattatt-tgatgatttt 18677404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 20045409 - 20045537
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||| |||||| |||||    
T  20045409 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgaaaatttgggaatt 20045508  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  20045509 agggttaaaagtgattatt-tgatgatttt 20045537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 22252315 - 22252432
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  22252315 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttagtttttgagaatttga-aatta 22252413  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  22252414 gggttaagagtgataattg 22252432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 22002703 - 22002591
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  22002703 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgagaatt 22002604  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  22002603 agggttaaaagtg 22002591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 22245237 - 22245347
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  22245237 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttagtttttgagaatttga-aatta 22245335  T
Q  159 gagttaagagtg 170  Q
    | ||||||||||    
T  22245336 gggttaagagtg 22245347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 19936294 - 19936393
Alignment:
Q  115 tatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacag 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||| ||||||||||| |     
T  19936294 tatttaacatgttgtaggtttagtttttgagaatttgagaattagggttaaga---------gtgatgattttgaatgaaagtgaagttgaataatataa 19936384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 23914931 - 23914804
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgt-aggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||||| |||||||||| |||||| ||||  ||||| ||||||||| |||||| ||||||| || ||||||||||||||||||||||||||    
T  23914931 aaggtaagggtgggactaacattcaaaaatcttaagtcattgattctgaaaattggatttaatatgttgtaagttttagtttttgagaatttgagaatta 23914832  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||| | |||| ||| ||||||||||    
T  23914831 gggttaaaattgattatt-tgatgatttt 23914804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 4541584 - 4541712
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||| ||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||| |||||| || ||    
T  4541584 taaggtaagggtgggactaatattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgataatttgggattt 4541683  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| ||| || ||| ||||||||||    
T  4541684 agggttaaaagttattatt-tgatgatttt 4541712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 22385077 - 22385193
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||| ||||||| |||||||||||  |||| || |||||||| ||| ||||  |||||||||||||||||||||| |||||||||||||| |||||    
T  22385077 taaggtaatggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttag-ttttgagaatttga-aatta 22385174  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  22385175 gggttaagagtgataattg 22385193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 15071310 - 15071238
Alignment:
Q  151 gagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| | |||||||||    
T  15071310 gagaattagagataagagtgatgattgtgatgattttgaataaaagtgaagttgaataatataagttgctttt 15071238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 19154005 - 19154112
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||||||||||||| ||||||| || ||||||||  | || ||| ||||||| ||| | |||||||||||| |||||||| ||||||||||||||||||    
T  19154005 gatttcttaaggtaacggtgggactagcattcaattctattaagtttatgattctgatagttgtatttaacaggttgtaggattagtttttgagaatttg 19154104  T
Q  152 agaattag 159  Q
    | ||||||    
T  19154105 aaaattag 19154112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 19928758 - 19928847
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaat 148  Q
    ||||||||||||| || ||||||||| ||||||| || || ||||| ||||||||| |||||||||||| |||||||||||||| |||||    
T  19928758 taaggtaagggtgagactaacattcattaatcttaagcctttgattctgaaaattgcatttaacatgttataggtttagttttttagaat 19928847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 20501225 - 20501347
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  |||||||||||| |||| ||| |||||||||||| |||    
T  20501225 tttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttttagggttactttttgagaattggag 20501324  T
Q  154 aattagagttaagagtgatgattg 177  Q
     ||||  |||||||||||| ||||    
T  20501325 -attaaggttaagagtgataattg 20501347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 21330876 - 21330771
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttttt-gagaatttgagaatt 157  Q
    |||||||||||||||| || |||||| | ||||| |||||||||||||| |||||| ||||||||||||   |||||||||||| |||||||||||||||    
T  21330876 taaggtaagggtgggactatcattcagtgatcttaagtctatgattttg-aaattggatttaacatgtt-agggtttagtttttggagaatttgagaatt 21330779  T
Q  158 agagttaa 165  Q
    || |||||    
T  21330778 agggttaa 21330771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 25733821 - 25733920
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| |||||||||||||||||  |||  ||||| ||||||||| |||||| |||||||| ||||   ||||||||||||| |||||||    
T  25733821 aaggtaagggtgggactaacattcaataatcttatgtcattgattctgaaaattggatttaatatgttgtaagttttagttttgagaatttgggaattag 25733920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 37516660 - 37516548
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaat 156  Q
    ||||||||||||||||| |||| |||||||||||||||| | ||||| || |||||| |||||| | | ||||||||| ||||||| |||||||||||||    
T  37516660 ttaaggtaagggtgggactaaccttcaataatcttgagtatgtgattctg-aaattgaatttaaaacgattgtaggttgagttttt-agaatttgagaat 37516563  T
Q  157 tagagttaagagtga 171  Q
    ||| ||||| |||||    
T  37516562 tagggttaaaagtga 37516548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 13660854 - 13660969
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| ||||||||| ||||||||| |||||||||| |  |||| ||||||||||||||    
T  13660854 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaaattgaatttaacatggttgtaggttgaagtttt-agaatttgagaatt 13660952  T
Q  158 agagttaagagtgatga 174  Q
    || ||| | ||||||||    
T  13660953 agggttcaaagtgatga 13660969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 13719497 - 13719612
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| ||||||||| ||||||||| |||||||||| |  |||| ||||||||||||||    
T  13719497 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaaattgaatttaacatggttgtaggttgaagtttt-agaatttgagaatt 13719595  T
Q  158 agagttaagagtgatga 174  Q
    || ||| | ||||||||    
T  13719596 agggttcaaagtgatga 13719612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 17438657 - 17438764
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||||||||||||||| || || || ||||||||  | || ||||||||||| |||   | |||||||||| |||||||| ||||||| ||||||||||    
T  17438657 gatttcttaaggtaaggttgagactagcattcaattctattaagtctatgattctgatggtcgtatttaacaagttgtaggattagtttgtgagaatttg 17438756  T
Q  152 agaattag 159  Q
    ||||||||    
T  17438757 agaattag 17438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 28398540 - 28398423
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || |||||||||||  |||| || |||||||| |||  |||  | ||||||||||||||| |||||||| ||||| |||| |||||    
T  28398540 taaggtaagggtgagactaacattcaattttcttaagcctatgattctgatgattagaattaacatgttgtaggattagttttggagaa-ttgaaaatta 28398442  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  28398441 gggttaagagtgataattg 28398423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 17460203 - 17460290
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||||||||||||||| |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||  ||||||| ||||    
T  17460203 tttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttagaggtttaatttt 17460290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 42265510 - 42265614
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaatta 158  Q
    ||||||||||||||| |||| || |||||   ||||| ||||||| ||||||||| |||||||| |||||||||| ||| ||||| ||||||| ||||||    
T  42265510 aaggtaagggtgggactaacctttaataagtctgagtatatgattctgaaaattgaatttaacaagttgtaggttgtag-ttttgggaatttgggaatta 42265608  T
Q  159 gagtta 164  Q
    | ||||    
T  42265609 gggtta 42265614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 20458045 - 20457989
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattg 114  Q
    |||||||||||||| || |||| ||||||||| |||||| |||||||||||||||||    
T  20458045 ttaaggtaagggtgagactaaccttcaataattttgagtatatgattttgaaaattg 20457989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 22996770 - 22996682
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||| |||||||||||||| || |||||||||||  |||| || ||||||||||||  |||  |||||||||| ||||||| |||||||    
T  22996770 gatttgttaaggtaagggtgagactaacattcaatcttcttaagcctatgattttgatgattagatttaacatg-tgtaggtgtagtttt 22996682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 40492028 - 40492139
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || || ||||||||  | || ||||| | |||||||  |||  |||||||| || ||||| ||| |||| ||||||||||||||||    
T  40492028 taaggtaagggtgagactagcattcaatcttattaagtctgtaattttgatgattaaatttaacaagt-gtaggattaattttagagaatttgagaatta 40492126  T
Q  159 gagttaagagtga 171  Q
    | |||||||||||    
T  40492127 gggttaagagtga 40492139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 3273942 - 3273867
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    |||||||||||||||| |||| || ||||||  || || ||||||| ||||||||| |||||||| ||||| ||||    
T  3273942 taaggtaagggtgggactaacctttaataattatgtgtatatgattctgaaaattgaatttaacaggttgtgggtt 3273867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 17085077 - 17085187
Alignment:
Q  66 agggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaa 165  Q
    ||||||||| |||||||||||  |||| || || | ||| |||  |||  |||||||| |||||||| |||||||||| ||| |||| |||||| |||||    
T  17085077 agggtgggactaacattcaatcttcttaagcctttaattatgatgattagatttaacaagttgtagggttagtttttg-gaaattgaaaattagggttaa 17085175  T
Q  166 gagtgatgattg 177  Q
    ||||||| ||||    
T  17085176 gagtgataattg 17085187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 17085311 - 17085421
Alignment:
Q  66 agggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaa 165  Q
    ||||||||| |||||||||||  |||| || || | ||| |||  |||  |||||||| |||||||| |||||||||| ||| |||| |||||| |||||    
T  17085311 agggtgggactaacattcaatcttcttaagcctttaattatgatgattagatttaacaagttgtagggttagtttttg-gaaattgaaaattagggttaa 17085409  T
Q  166 gagtgatgattg 177  Q
    ||||||| ||||    
T  17085410 gagtgataattg 17085421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 22317911 - 22317986
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    |||||||||||||||| |||| |||| ||||  | ||| ||||||| ||||||||| |||||||| ||| ||||||    
T  22317911 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaacaggttctaggtt 22317986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 23661347 - 23661266
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    |||||||||||||||| |  ||||||||  || | || |||||||| ||| ||||  ||||||||||||| |||||||||||    
T  23661347 taaggtaagggtgggactggcattcaatcttcataagcctatgattctgataattagatttaacatgttggaggtttagttt 23661266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 14396910 - 14396981
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgt-atttaacatgttgt 129  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||| || || |||| ||||||||||||||    
T  14396910 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aatttgtgatttaacatgttgt 14396981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 20463248 - 20463192
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattg 114  Q
    |||||||||||||| || |||| |||||||||  ||||| ||||||| |||||||||    
T  20463248 ttaaggtaagggtgagactaaccttcaataattctgagtatatgattctgaaaattg 20463192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 22237050 - 22237125
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtt 134  Q
    ||||||||||||||||||||  |||||||||  ||||| | |||||||||| | || ||||||||| ||||||||||    
T  22237050 taaggtaagggtgggagtaatcttcaataattctgagtatgtgattttgaaga-tgaatttaacatggttgtaggtt 22237125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 20629495 - 20629676
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  20629495 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatattgtaggtttagtttt 20629594  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  20629595 tgagaatttgagaattagggttatgagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 20629676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 42 - 217
Target Start/End: Original strand, 55318607 - 55318782
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  55318607 ccttacaattgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaagtttagtttt 55318706  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggtt 217  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  55318707 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggtt 55318782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 24514342 - 24514161
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24514342 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 24514243  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  24514242 tgagaatttgataattaggattaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataagttgctttt 24514161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 46823106 - 46822939
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46823106 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaatcgtatttaacatgttgtaggtttagtttttgagaatttgagaa 46823007  T
Q  156 ttagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  46823006 ttagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 46822939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 13937295 - 13937458
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13937295 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 13937394  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     |||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  13937395 ggttaagagtgatgattgtgatgattttggatgaaagtgaagttgaataatataggttgctttt 13937458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 41124780 - 41124617
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41124780 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 41124681  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  41124680 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgttttt 41124617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 16282079 - 16282242
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16282079 aaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaattag 16282178  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  16282179 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 16282242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 56 - 217
Target Start/End: Complemental strand, 10379984 - 10379823
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  10379984 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtagatttagtttttgagaatttgagaa 10379885  T
Q  156 ttagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggtt 217  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  10379884 ttagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggtt 10379823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 17444084 - 17444247
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  17444084 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttaagaattag 17444183  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  17444184 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatgggttgctttt 17444247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 38961158 - 38961322
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttag-tttttgagaatttgagaatta 158  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38961158 aaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttttttgagaatttgagaatta 38961257  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  38961258 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatatgttgctttt 38961322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 12119185 - 12119302
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12119185 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 12119284  T
Q  159 gagttaagagtgatgatt 176  Q
    | ||||||||||||||||    
T  12119285 gggttaagagtgatgatt 12119302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 8899664 - 8899510
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  8899664 aaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatataatatgttgtaggtttagtttttgagaatttgagaattag 8899565  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||         |||||||||||||||||| |||||||||||  ||||||||||    
T  8899564 ggttaagagtgat---------gattttgaatgaaagtgaagttgaataatatgggttgctttt 8899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 37428667 - 37428549
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||| ||||||||||| | ||||  ||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  37428667 taaggtaagggtgggactaatattcaataatcctaagtcattgattctgaatattgtattcaacatgttgtaggtttagtttttgagaatttgagaatta 37428568  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  37428567 gggttaagagtgataattg 37428549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 17464126 - 17463998
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  17464126 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 17464027  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  17464026 agggttaaaagtgattatt-tgatgatttt 17463998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 34160274 - 34160146
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  34160274 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 34160175  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  34160174 agggttaaaagtgattatt-tgatgatttt 34160146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 13938301 - 13938381
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13938301 aaggtaagggtgggaataacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 13938381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 6468345 - 6468454
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgaga 154  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||  ||||||||||||||||| ||||||||||||||||||| ||    
T  6468345 tcttaaggtaagggtgggagtaacattcaataatcttaagtcattgattctgaaaattagatttaacatgttgtaggttttagtttttgagaatttggga 6468444  T
Q  155 attagagtta 164  Q
    ||||| ||||    
T  6468445 attagggtta 6468454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 10246936 - 10247064
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  10246936 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttggaaatt 10247035  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  10247036 agggttaaaagtgattatt-tgatgatttt 10247064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 15978483 - 15978355
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  15978483 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgggaatt 15978384  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  15978383 agggttaaaagtgattatt-tgatgatttt 15978355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 55477440 - 55477312
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  55477440 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 55477341  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  55477340 agggttaaaagtgattatt-tgatgatttt 55477312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 7780559 - 7780671
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  7780559 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgagaatt 7780658  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  7780659 agggttaaaagtg 7780671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 15413379 - 15413251
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| | ||||||| ||||||||||| ||||| ||||||||||||||||||| |||||    
T  15413379 taaggtaagggtgggattaacattcaataatcttaagtcattgattctaaaaattggatttaacatgtggtaggttttagtttttgagaatttgggaatt 15413280  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  15413279 agggttaaaagtgattatt-tgatgatttt 15413251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 45577655 - 45577783
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| |||   ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  45577655 taaggtaagggtgagactaacattcaataatcttaagtaattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 45577754  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  45577755 agggttaaaagtgattatt-tgatgatttt 45577783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 16453489 - 16453601
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||||| |||||||||| ||| |||||||||||||||||||||    
T  16453489 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatatgttgtaggttttcgtttttgagaatttgagaatt 16453588  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  16453589 agggttaaaagtg 16453601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 1864367 - 1864479
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||   |||| || |||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  1864367 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctggaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 1864466  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  1864467 agggttaaaagtg 1864479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 8500270 - 8500198
Alignment:
Q  151 gagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  8500270 gagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 8500198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 13151002 - 13151102
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||   |||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  13151002 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 13151101  T
Q  158 a 158  Q
    |    
T  13151102 a 13151102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 13153470 - 13153570
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||   |||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  13153470 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 13153569  T
Q  158 a 158  Q
    |    
T  13153570 a 13153570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 28847833 - 28847947
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||| ||||||||||||| ||||   |||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  28847833 taaggtaagggtgggactaatattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgggaatt 28847932  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  28847933 agggttaaaagtgat 28847947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 12386382 - 12386281
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| || ||||||||  | || |||||||||||||||   |||||||||||| |||||||| ||||||||||||||||||||||||    
T  12386382 ttaaggtaagggtgggactagcattcaattctattaagtctatgattttgatggttgtatttaacacgttgtaggattagtttttgagaatttgagaatt 12386283  T
Q  158 ag 159  Q
    ||    
T  12386282 ag 12386281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 14604914 - 14604801
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||| ||||||| ||||| ||||  ||||| ||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||    
T  14604914 taaggtaagggtgggactaatattcaattatcttaagtcattgattctgaaaattgtatttaacttgttgtagctttag-ttttgagaatttg-gaatta 14604817  T
Q  159 gagttaagagtgatga 174  Q
    | ||||| ||||||||    
T  14604816 gggttaaaagtgatga 14604801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 53300919 - 53300988
Alignment:
Q  154 aattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  53300919 aattagggttaagagtgatgattgtgatgattttgaataaaagtgaagttgaataatataggttgctttt 53300988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 9578602 - 9578480
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| ||||||||| |||||| ||     
T  9578602 tttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagttttttagaattgga- 9578504  T
Q  154 aattagagttaagagtgatgattg 177  Q
    |||||| ||| |||||||| ||||    
T  9578503 aattagggtttagagtgataattg 9578480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 14671832 - 14671706
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||| || |||||||| ||||   ||||||||||||| |||||||    
T  14671832 aaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattgaatatgttgtaagttttagttttgagaatttgggaattag 14671733  T
Q  160 agttaagagtgatgattgtgatgatttt 187  Q
     ||||| | |||| ||| ||||||||||    
T  14671732 ggttaaaattgattatt-tgatgatttt 14671706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 27166002 - 27165930
Alignment:
Q  151 gagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||| || || ||||||||    
T  27166002 gagaattagggttaagagtgatgattgtgatgattttgaataaaagtgaagttgaatagtatagattgctttt 27165930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 44495588 - 44495489
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| ||||||||||| ||| ||||  ||||||||| ||| |||||||| ||||||||||| ||||||||    
T  44495588 taaggtaagggtgggactaacattcaatcttcttaagtctatgattatgataattagatttaacatattggaggtttag-ttttgagaattggagaatta 44495490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 325133 - 325031
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| || ||||||||  |||| || |||||||| ||| ||||  ||||||||||||| |||||||| ||||||||||| |||||    
T  325133 tcttaaggtaagggtgggactagcattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttag-ttttgagaattggagaa 325035  T
Q  156 ttag 159  Q
    ||||    
T  325034 ttag 325031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 16828281 - 16828405
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagttttt-gagaatttgagaat 156  Q
    |||||||||||||||| || |||||| | ||||| ||||||||||| || |||||| |||||||||||  |||| |||||||||| ||||||||||||||    
T  16828281 taaggtaagggtgggactatcattcagtgatcttaagtctatgattctg-aaattggatttaacatgt--taggttttagtttttggagaatttgagaat 16828377  T
Q  157 tagagttaagagtgatgattgtgatgatt 185  Q
    ||| ||||| |||||| ||| ||||||||    
T  16828378 tagggttaaaagtgataatt-tgatgatt 16828405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 22758882 - 22758947
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||    
T  22758882 tgaaaattgtatttaacatgttgtaggtttag-ttttgaggatttgggaattagggttaaaagtgat 22758947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 10557633 - 10557587
Alignment:
Q  177 gtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  10557633 gtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 10557587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 24152381 - 24152463
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggttta 136  Q
    ||||||||||||||||||||| |||||||||||  || | || |||||||| ||| ||||  ||||||||||||| |||||||    
T  24152381 tttcttaaggtaagggtgggactaacattcaatcttcctaagcctatgattctgataattagatttaacatgttggaggttta 24152463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 32402182 - 32402300
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| ||  | | ||| |||  |||  ||||||||||| |||||||||||||||||| ||||  ||||||    
T  32402182 taaggtaagggtgggactaacattcaattctcttaagcttgtaattctgatgattagatttaacatgtcgtaggtttagtttttgaggattttggaatta 32402281  T
Q  159 gagttaagagtgatgattg 177  Q
    |  ||||||||||| ||||    
T  32402282 ggcttaagagtgataattg 32402300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 43888803 - 43888868
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||    
T  43888803 tgaaaatggtatttaacatgttgtaggtttag-ttttgaggatttgggaattagggttaaaagtgat 43888868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 43928058 - 43927958
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || || ||||||||  | || ||||| | ||| |||   |||||||||||| |||||||| |||||| ||||||||||||||||||    
T  43928058 taaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatggttgtatttaacaagttgtaggattagttattgagaatttgagaatta 43927959  T
Q  159 g 159  Q
    |    
T  43927958 g 43927958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 11202278 - 11202191
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||||||||||||||||| || || ||||||||  |||| ||||||||||| ||| ||||  ||||||||||||  |||| |||||||    
T  11202278 tttcttaaggtaagggtgagactagcattcaatcttcttaagtctatgattctgataattagatttaacatgttagaggtgtagtttt 11202191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 141
Target Start/End: Original strand, 18699478 - 18699513
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||||||||||||||||||||||||||||||    
T  18699478 tgaaaattgtatttaacatgttgtaggtttagtttt 18699513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 45220313 - 45220364
Alignment:
Q  172 tgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||| |||||||||||||||||||||| ||| ||||||| |||||||||||    
T  45220313 tgattatgatgattttgaatgaaagtgaagttaaataatataggttgctttt 45220364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 49968858 - 49968959
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaat 156  Q
    |||||||||| |||||| |||| |||| ||||  | ||| ||||||| ||||||||| |||||||| ||||||| || ||||||| ||||||||| ||||    
T  49968858 ttaaggtaagagtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaacaggttgtagcttgtagtttt-gagaatttgggaat 49968956  T
Q  157 tag 159  Q
    |||    
T  49968957 tag 49968959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 22146768 - 22146834
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| || |||||| |||||||||||    
T  22146768 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aaattggatttaacatgt 22146834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 37641504 - 37641570
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| || |||||| |||||||||||    
T  37641504 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aaattggatttaacatgt 37641570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 46752158 - 46752053
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| || |||||| ||||||||| |||||||||| |  |||| || |||||||||||    
T  46752158 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctg-aaattgaatttaacatggttgtaggttaaagtttt-aggatttgagaatt 46752061  T
Q  158 agagttaa 165  Q
    || |||||    
T  46752060 agggttaa 46752053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 12470848 - 12470783
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    ||||||||||||||| |||||| ||||||||| ||||||  ||||| ||||||| ||||| ||||||    
T  12470848 tgaaaattgtatttaccatgttttaggtttag-ttttgaagatttgggaattagggttaaaagtgat 12470783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 45606140 - 45606178
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtc 97  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  45606140 taaggtaagggtgggactaacattcaataatcttaagtc 45606178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 50243864 - 50243782
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    |||||||||||||| || |||||||||||  |||| || || ||||| | | ||||  ||||||||||||| |||||||||||    
T  50243864 ttaaggtaagggtgagactaacattcaatcttcttaagcctgtgattctcataattagatttaacatgttggaggtttagttt 50243782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 13522202 - 13522277
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtt 134  Q
    |||||||||||||||| || ||||||||  |||| || |||||||| || |||||| ||||||||| ||||||||||    
T  13522202 taaggtaagggtgggactagcattcaatcttcttaagcctatgattctg-aaattgaatttaacatggttgtaggtt 13522277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 26054434 - 26054505
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgt-atttaacatgttgt 129  Q
    |||||||||||||| || |||||||||||| |||| || |||||||| || || |||| ||||||||||||||    
T  26054434 ttaaggtaagggtgagactaacattcaatattcttaagcctatgattctg-aatttgtgatttaacatgttgt 26054505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 6880 - 7061
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6880 ccttgcaatcaatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 6979  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||||    
T  6980 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaataaaagtgaaattgaataatataggttgctttt 7061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 6240 - 6421
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| |||||||||||| ||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  6240 ccttgcaatcgatttcttaaggaaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtagatttagtttt 6339  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  6340 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 6421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 10643 - 10824
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  10643 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtagattttgtttt 10742  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  10743 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 10824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 15643 - 15589
Alignment:
Q  169 tgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15643 tgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 15589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 58 - 223
Target Start/End: Complemental strand, 34339 - 34174
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34339 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 34240  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  34239 agggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 34174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 30782 - 30697
Alignment:
Q  138 tttttgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  30782 tttttgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 30697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 107334 - 107153
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  107334 ccttgcaatcgatttcataaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 107235  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||||||    
T  107234 tgagaatttgagaattagggttaagagtgatgattgtggtgattttgaatgaaagtgaaattgaataatataggttgctttt 107153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 115835 - 115731
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  115835 ccttgcaatcgatttcataaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 115736  T
Q  142 tgaga 146  Q
    |||||    
T  115735 tgaga 115731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 15489452 - 15489633
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  15489452 ccttgcaatcgatttcttaaggtaagggtgggaataacattcaataatcttgagtctataattctgaaaattgtatttaacatgttgtaggtttagtttt 15489551  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  15489552 tgagaatttgagaattagggttaaaagtgatgattgtgaagattttgaatgaaagtgaagttgaataatataggttgctttt 15489633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 59 - 229
Target Start/End: Complemental strand, 363215 - 363045
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  363215 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 363116  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgcttttgatgat 229  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||||    
T  363115 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatatgttgctttttatgat 363045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 12778179 - 12778361
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaa-ttgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  12778179 ccttgcaatcgatttcttaaggcaagggtgggactaacattcaataatcttgagtctatgattctgaaaaattgtatttaacatgttgtaggtttagttt 12778278  T
Q  141 ttgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  12778279 ttgagaatttgagaattagggttaagagtgatgattgtgataattttgaatgaaagtgaagttgaataatataggttgctttt 12778361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 58 - 223
Target Start/End: Original strand, 14970026 - 14970191
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14970026 ttaaggtaagggtgagactaacattcaataatcttgagtctgtgattctgaaaattgtatttaacatgttataggtttagtttttgagaatttgagaatt 14970125  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  14970126 agggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 14970191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 3515849 - 3515685
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3515849 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgataatttgagaatta 3515750  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  3515749 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgttttt 3515685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 18214524 - 18214688
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18214524 taaggtaagcgtgggactaacattcaataatcttgagtctatgattctgcaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 18214623  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | |||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  18214624 gggttaagagtgatgattgtgatgattttgaaggaaagtgaagttgaataatataggttgctttt 18214688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 11773 - 11932
Alignment:
Q  64 taagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagtt 163  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  11773 taagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaattagggtt 11872  T
Q  164 aagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  11873 aagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatgggttgctttt 11932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 14745683 - 14745860
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    |||||||||||||||||||||||||||    
T  14745683 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaa----tatttaacatgttgtaggtttagtttt 14745778  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||| |||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  14745779 tgagaatatgagaattaaggttaagagtaatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 14745860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 52872385 - 52872557
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52872385 ccttgcaatcgatttcttaaggtaagggtgggattaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 52872484  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| |||||||         ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  52872485 tgagaatttgagaattagggttaaga---------gtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 52872557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 60 - 211
Target Start/End: Complemental strand, 52313595 - 52313444
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||     
T  52313595 aaggtaagggtgggactaacattcaataatcttaagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaattagagaattaa 52313496  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataata 211  Q
     ||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  52313495 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttaaataata 52313444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 19858472 - 19858327
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaa-ttgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||    
T  19858472 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaaattgtatttaacatgttgtaggtttacttt 19858373  T
Q  141 ttgagaatttgagaattagagttaagagtgatgattgtgatgattt 186  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||    
T  19858372 ttgagaatttgataattagggttaagagtgatgattgtgatgattt 19858327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 19617394 - 19617550
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||           
T  19617394 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaattt------- 19617486  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgcttt 222  Q
     | |||||||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||    
T  19617487 -gggttaagagtgatgattttgatgatttcgaatgaaagtgaagttgaataatataggttgcttt 19617550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 15354846 - 15355002
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtattt-aacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||| | ||||||||||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  15354846 taaggtaagggtggaactaacattcaataatcttgagtctatgattctgataattttattttaacatgttgtaggtttagtttttgagaatttgagaatt 15354945  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    || |||||||         ||||||||||||||||||||||| ||||||||| | |||||||||||    
T  15354946 agggttaaga---------gtgatgattttgaatgaaagtgaagttgaataacataggttgctttt 15355002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 7640400 - 7640528
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  7640400 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaatt 7640499  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    |  ||||| |||||| ||| ||||||||||    
T  7640500 aaggttaaaagtgattatt-tgatgatttt 7640528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 1836734 - 1836860
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  1836734 taaggtaagggtgggactaacattcaataatcttgagtctatcattctgaaaattgtatttaaca-gttgtaggtatagtttttgagaatttgggaatta 1836832  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||| |||||| ||| ||||||||||    
T  1836833 gggttaaaagtgattatt-tgatgatttt 1836860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 44616239 - 44616125
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  44616239 taaggtaagggtgagactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaatt 44616140  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  44616139 agggttaaaagtgat 44616125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 3485924 - 3485803
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaattt 150  Q
    ||||| |||| ||||||||| || ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  3485924 gatttattaatgtaagggtgagactaacattcaataatcttaagtctatgattctgaaaattggatttaacatgttgtaggttttagtttttgagaattt 3485825  T
Q  151 gagaattagagttaagagtgat 172  Q
    ||||||||| ||||| ||||||    
T  3485824 gagaattagggttaaaagtgat 3485803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 19243651 - 19243523
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  19243651 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgagaatt 19243552  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  19243551 agggttaaaagtgattatt-tgatgatttt 19243523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 15117566 - 15117694
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  15117566 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 15117665  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  15117666 agggttaaaagtgattatt-tgatgatttt 15117694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 44772297 - 44772425
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||| |||||||||||| |||||||||| ||||||||||||||    
T  44772297 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattttacatgttgtaggttttagtttttcagaatttgagaatt 44772396  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    |||||||| |||||| ||| ||||||||||    
T  44772397 agagttaaaagtgattatt-tgatgatttt 44772425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 16044010 - 16043892
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || |||||| || ||||||| |||||||| || |||||||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  16044010 taaggtaagggtgagactaacatgcagtaatcttaagtctatggttctgaaaattgtatttaacatgttataggattagtttttgaggatttgagaatta 16043911  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  16043910 gggttaagagtgataattg 16043892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 50221552 - 50221664
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  50221552 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgagaatt 50221651  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  50221652 agggttaaaagtg 50221664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 18238826 - 18238954
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| || |||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  18238826 taaggtaagggtgagactaacattcaataatcttaagtcattgattctggaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 18238925  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  18238926 agggttaaaagtgattatt-tgatgatttt 18238954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 12032985 - 12033085
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  12032985 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 12033084  T
Q  158 a 158  Q
    |    
T  12033085 a 12033085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 25031215 - 25031099
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaa-ttgtatttaacatgttgtaggttt-agtttttgagaatttgagaa 155  Q
    ||||||||||||||||| ||||||||||||||||| ||||   |||| |||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  25031215 ttaaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaaattggatttaacatgttgtaggttttagtttttgagaatttgagaa 25031116  T
Q  156 ttagagttaagagtgat 172  Q
    |||| ||||| ||||||    
T  25031115 ttagggttaaaagtgat 25031099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 32306147 - 32306269
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| |||||||||||  |||| || ||||||||||||  |||  ||||||||||||||||| |||||||||||||||| ||     
T  32306147 tttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattttgatgattagatttaacatgttgtagggttagtttttgagaattgga- 32306245  T
Q  154 aattagagttaagagtgatgattg 177  Q
    |||||| |||||||||||| ||||    
T  32306246 aattagggttaagagtgataattg 32306269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 29268304 - 29268204
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||    
T  29268304 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagtatttgggaatt 29268205  T
Q  158 a 158  Q
    |    
T  29268204 a 29268204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 14873299 - 14873413
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||| ||||||||||||| ||||   |||| ||||||||| ||||||||||||||||| |||| |||||||||||||| |||||    
T  14873299 taaggtaagggtgggactaaaattcaataatcttaagtcatagattctgaaaattggatttaacatgttgtaggttttaatttttgagaatttgggaatt 14873398  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  14873399 agggttaaaagtgat 14873413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 14717934 - 14718025
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatt 149  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  14717934 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatt 14718025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 15792747 - 15792629
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| |||||||||||||||| || ||||    
T  15792747 ttaaggtaagggtgggactaacattcaattttcttaagcctatgattctgatgattagatttaacatgttgtaggattagtttttgagaattgga-aatt 15792649  T
Q  158 agagttaagagtgatgattg 177  Q
    || |||||||||||| ||||    
T  15792648 agggttaagagtgataattg 15792629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 140
Target Start/End: Complemental strand, 12611978 - 12611880
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    |||||||||||||||||||||||||||||| || |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||| |||||||||||    
T  12611978 ccttgcaattgatttcttaaggtaagggtgagactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagttt 12611880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 26049620 - 26049737
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| |||||||||||||||| || |||||    
T  26049620 taaggtaagggtgggactaacattcaatcttcttaagcctatgattatgatgattagatttaacatgttgtagggttagtttttgagaattgga-aatta 26049718  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  26049719 gggttaagagtgataattg 26049737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 14651672 - 14651564
Alignment:
Q  63 gtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagt 162  Q
    |||||||||||| | ||||||| ||||||| || |||| ||| |||||||||| |||||||||||||| |||||||| ||||||||||| ||||||| ||    
T  14651672 gtaagggtgggacttacattcattaatcttaagactattattctgaaaattgtctttaacatgttgtatgtttagttcttgagaatttgggaattag-gt 14651574  T
Q  163 taagagtgat 172  Q
    ||| ||||||    
T  14651573 taaaagtgat 14651564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 26014336 - 26014225
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||| |||||||||||||||| | |||||||| |||||| ||||||||| |||||||||| ||||||| || |||||||||||    
T  26014336 taaggtaagggtgggactaaccttcaataatcttgagtatgtgattttg-aaattgaatttaacatggttgtaggttgagttttt-aggatttgagaatt 26014239  T
Q  158 agagttaagagtga 171  Q
    || ||||| |||||    
T  26014238 agggttaaaagtga 26014225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 18023060 - 18022934
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||| || |||||||| ||||   ||||||||||||| |||||||    
T  18023060 aaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattgaatatgttgtaagttttagttttgagaatttgggaattag 18022961  T
Q  160 agttaagagtgatgattgtgatgatttt 187  Q
     ||||| | |||| ||| ||||||||||    
T  18022960 ggttaaaattgattatt-tgatgatttt 18022934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 12841621 - 12841517
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| |||||||||||  |||| || | |||||| ||| ||||  ||||||||||||| |||||||| ||||||||||| |||    
T  12841621 tttcttaaggtaagggtgggactaacattcaatcttcttaagcccatgattctgataattagatttaacatgttggaggtttag-ttttgagaattggag 12841523  T
Q  154 aattag 159  Q
    ||||||    
T  12841522 aattag 12841517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 26790307 - 26790215
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttga 152  Q
    ||||||||||||| || |||||||||||  |||| |||||||||||||||  |||  |||||||||| ||||||||||||||||||||||||||    
T  26790307 taaggtaagggtgagactaacattcaattttcttaagtctatgattttgatgattagatttaacatg-tgtaggtttagtttttgagaatttga 26790215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 15011518 - 15011583
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||    
T  15011518 tgaaaattgtatttaacatgttgtaggtttag-ttttgaggatttgggaattagggttaaaagtgat 15011583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 51463031 - 51463111
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    |||||||||||| || |||||||||||  |||| || |||||||||||| ||||  ||||||||||||| |||||||||||    
T  51463031 aaggtaagggtgagactaacattcaatcttcttaagcctatgattttgataattagatttaacatgttggaggtttagttt 51463111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 19858302 - 19858256
Alignment:
Q  177 gtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  19858302 gtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 19858256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 23802406 - 23802487
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||| || |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||| |||||||||||    
T  23802406 taaggtaagggtgagactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagttt 23802487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 14852019 - 14852141
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||| ||| |||||||||||  |||| || || | ||| |||  |||  |||||||| |||||||| ||||||||| |||||| ||     
T  14852019 tttcttaaggtaagggttggactaacattcaatcttcttaagcctttaattctgatgattagatttaacaagttgtagggttagttttttagaattgga- 14852117  T
Q  154 aattagagttaagagtgatgattg 177  Q
    ||||||  ||||||||||| ||||    
T  14852118 aattaggattaagagtgataattg 14852141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 13591068 - 13591180
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgagaat 156  Q
    ||||||||||||||||| |||| || ||||||||||||| | ||| | || | |||| ||||||||| |||||| ||| || |||| |||||||||||||    
T  13591068 ttaaggtaagggtgggactaaccttaaataatcttgagtatgtgaatctg-atattgaatttaacatggttgtatgttgaggtttt-agaatttgagaat 13591165  T
Q  157 tagagttaagagtga 171  Q
    ||| ||||| |||||    
T  13591166 tagggttaaaagtga 13591180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 27996843 - 27996729
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtt-tagtttttgagaatttgagaat 156  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| |||||| || ||||||||| ||||||| || |||||||  |||||||| ||||    
T  27996843 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaaa-tgaatttaacatggttgtagattgtagtttt--agaatttgggaat 27996747  T
Q  157 tagagttaagagtgatga 174  Q
    ||| ||||| ||||||||    
T  27996746 tagggttaaaagtgatga 27996729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 50161092 - 50161014
Alignment:
Q  106 tgaaaattgtatttaacatg-ttgtaggtttagtttttgagaatttgagaattagagttaagagtgatgattgtgatgatt 185  Q
    ||||||||| |||| ||||| ||||||||| ||||||| |||||||||||||||| ||||| ||||| |||| ||||||||    
T  50161092 tgaaaattgaattttacatggttgtaggttgagttttt-agaatttgagaattagggttaaaagtgaggatt-tgatgatt 50161014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 22354720 - 22354654
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| || |||||| |||||||||||    
T  22354720 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aaattggatttaacatgt 22354654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 10057713 - 10057619
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgaga 154  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| |||| | || ||||||||| |||||||||| || |||| |||||||||||    
T  10057713 taaggtaagggtgggactaaccttcaataattctgagtatgtgattctgaaga-tgaatttaacatggttgtaggttgaggtttt-agaatttgaga 10057619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 5e-77; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 24671884 - 24671703
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  24671884 ccttgcaatcgatttctcaaggtaagggtgggactaacattcaataatcttgagtctatgattctaaaaattgtatttaatatgttgtaggtttagtttt 24671785  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  24671784 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 24671703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 22106307 - 22106143
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22106307 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 22106208  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  22106207 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 22106143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 32214247 - 32214414
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32214247 tcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 32214346  T
Q  156 ttagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  32214347 ttagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatatagattgctttt 32214414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 23706329 - 23706510
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  23706329 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtatgtttagtttt 23706428  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||    
T  23706429 tgataatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttaaataatctaggttgctttt 23706510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 23932319 - 23932138
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23932319 ccttgcaatctatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttt 23932220  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||    
T  23932219 tgagaatttgagaattagggttaatagtgatgattttgatgagtttgaatgaaagtgaagttgaataatataggttgctttt 23932138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 45027220 - 45027384
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45027220 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 45027319  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  45027320 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataagttgctttt 45027384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 6726888 - 6726725
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6726888 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 6726789  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||| ||| |||||| |||| |||||||||||    
T  6726788 ggttaagagtgatgattgtgatgattttgaatgaaattgaagttgaaaaatataggttgctttt 6726725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 24368668 - 24368504
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttag-tttttgagaatttgagaatta 158  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  24368668 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtatagttttttgagaatttgagaatta 24368569  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||    
T  24368568 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataagttgctttt 24368504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 24918982 - 24918830
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  24918982 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattctatttaccatgttgtaggtttagtttttgagaatttgagaatta 24918883  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataata 211  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24918882 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataata 24918830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 21154136 - 21154299
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21154136 aaggtaagagtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaattag 21154235  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     |||||||| |||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  21154236 ggttaagagcgatgattgtgatgattttgaatgaaagtgaagttgaataatatgggttgctttt 21154299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 41523202 - 41523364
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    |||||||||||| |  |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41523202 aaggtaagggtgaggctaacattcaataatcttgagtctatgatct-gaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaattag 41523300  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  41523301 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 41523364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 223
Target Start/End: Original strand, 24528866 - 24529031
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  24528866 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtaattaacatattgtaggtttactttttgagaatttgagaatt 24528965  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    || ||||||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||    
T  24528966 agggttaagagtgatgattgtgatgattttgaatgaaagtgaagttaaataatatagattgctttt 24529031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 24682292 - 24682122
Alignment:
Q  45 tgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttga 144  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24682292 tgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttaagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttga 24682193  T
Q  145 gaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |        |||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  24682192 g--------aattagggttaagagtgatgattgtgataattttgaataaaagtgaagttgaataatataggttgctttt 24682122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 24897411 - 24897523
Alignment:
Q  61 aggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaattag 159  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24897411 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaattag 24897510  T
Q  160 agttaagagtgat 172  Q
     ||||| ||||||    
T  24897511 ggttaaaagtgat 24897523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 24899894 - 24900006
Alignment:
Q  61 aggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaattag 159  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24899894 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaattag 24899993  T
Q  160 agttaagagtgat 172  Q
     ||||| ||||||    
T  24899994 ggttaaaagtgat 24900006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 24902371 - 24902483
Alignment:
Q  61 aggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaattag 159  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24902371 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaattag 24902470  T
Q  160 agttaagagtgat 172  Q
     ||||| ||||||    
T  24902471 ggttaaaagtgat 24902483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 24904848 - 24904960
Alignment:
Q  61 aggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaattag 159  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24904848 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaattag 24904947  T
Q  160 agttaagagtgat 172  Q
     ||||| ||||||    
T  24904948 ggttaaaagtgat 24904960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 24907323 - 24907435
Alignment:
Q  61 aggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaattag 159  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24907323 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaattag 24907422  T
Q  160 agttaagagtgat 172  Q
     ||||| ||||||    
T  24907423 ggttaaaagtgat 24907435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 18809891 - 18809763
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  18809891 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 18809792  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  18809791 agggttaaaagtgattatt-tgatgatttt 18809763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 23711227 - 23711355
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  23711227 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 23711326  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  23711327 agggttaaaagtgattatt-tgatgatttt 23711355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 32038711 - 32038839
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  32038711 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 32038810  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  32038811 agggttaaaagtgattatt-tgatgatttt 32038839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 39683264 - 39683136
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  39683264 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaacatgttgtaggttttagtttttgagaatttgggaatt 39683165  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  39683164 agggttaaaagtgattatt-tgatgatttt 39683136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 23131810 - 23131682
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  23131810 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttggaaatt 23131711  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  23131710 agggttaaaagtgattatt-tgatgatttt 23131682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 23134277 - 23134149
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  23134277 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttggaaatt 23134178  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  23134177 agggttaaaagtgattatt-tgatgatttt 23134149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 34401736 - 34401864
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||    
T  34401736 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttggaaatt 34401835  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  34401836 agggttaaaagtgattatt-tgatgatttt 34401864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 38968426 - 38968314
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||| | ||||||| ||||||||||| |  | |||||||||||||||||||||||||    
T  38968426 ttaaggtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacatgtag--gttttagtttttgagaatttgagaatt 38968329  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  38968328 agggttaaaagtgat 38968314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 28578053 - 28577939
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||| ||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  28578053 taaggtaagggtaggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 28577954  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  28577953 agggttaaaagtgat 28577939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 22695283 - 22695155
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||  ||||||||||||||||| ||||||||||||||||||| |||||    
T  22695283 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaatttgatttaacatgttgtaggttttagtttttgagaatttgggaatt 22695184  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| | |||| ||| ||||||||||    
T  22695183 agggttaaaaatgattatt-tgatgatttt 22695155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 26508805 - 26508677
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| || |||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  26508805 taaggtaagggtgagactaacattcaataatcttaagtcattgattctggaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 26508706  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  26508705 agggttaaaagtgattatt-tgatgatttt 26508677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 26506327 - 26506199
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  | ||| || |||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  26506327 taaggtaagggtgagactaacattcaataatcttaagtcattaattctggaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 26506228  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  26506227 agggttaaaagtgattatt-tgatgatttt 26506199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 27919978 - 27920106
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  | ||| || |||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  27919978 taaggtaagggtgagactaacattcaataatcttaagtcattaattctggaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 27920077  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  27920078 agggttaaaagtgattatt-tgatgatttt 27920106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 572347 - 572232
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttg-aaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaat 156  Q
    |||||||||||||||| ||||||||||||||||| ||||   |||| || ||||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  572347 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaat 572248  T
Q  157 tagagttaagagtgat 172  Q
    ||| ||||| ||||||    
T  572247 tagggttaaaagtgat 572232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 23136516 - 23136402
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||| ||||||||||||| ||||   |||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  23136516 taaggtaagggtgggactaatattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgggaatt 23136417  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  23136416 agggttaaaagtgat 23136402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 22690670 - 22690559
Alignment:
Q  76 taacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaattagagttaagagtgatga 174  Q
    ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||| | |||| |    
T  22690670 taacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaaatgatta 22690571  T
Q  175 ttgtgatgatttt 187  Q
    || ||||||||||    
T  22690570 tt-tgatgatttt 22690559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 9785589 - 9785463
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||||| |||||||| ||||   ||||||||||||| |||||||    
T  9785589 aaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatatgttgtaagttttagttttgagaatttgggaattag 9785490  T
Q  160 agttaagagtgatgattgtgatgatttt 187  Q
     ||||| | |||| ||| ||||||||||    
T  9785489 ggttaaaattgattatt-tgatgatttt 9785463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 39827190 - 39827312
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| ||| |||||||  |||| || |||||||| |||  |||  ||||||||||||||||| |||||||||||||||| ||     
T  39827190 tttcttaaggtaagggtgggactaagattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattgga- 39827288  T
Q  154 aattagagttaagagtgatgattg 177  Q
    |||||| |||||||||||| ||||    
T  39827289 aattagggttaagagtgataattg 39827312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 34137915 - 34137799
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||| | |||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| |||||||||||||||| || ||||||    
T  34137915 aaggtaagggtggaactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattgga-aattag 34137817  T
Q  160 agttaagagtgatgattg 177  Q
     |||||||||||| ||||    
T  34137816 ggttaagagtgataattg 34137799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 18388190 - 18388289
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || |||| |||||||||| ||||| ||||||| ||||||||| |||||||| |||||||||| ||| ||||| ||||||| |||||    
T  18388190 taaggtaagggtgagactaaccttcaataatcctgagtatatgattctgaaaattggatttaacaagttgtaggttgtag-ttttgggaatttgggaatt 18388288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 25616628 - 25616572
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgta 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  25616628 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaagttgta 25616572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 27845610 - 27845492
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||| || |||||||||||  |||| ||||||| ||| |||  |||  |||||||| |||||||| |||||||||||||||| || ||||    
T  27845610 ttaaggtaagggtgagactaacattcaattttcttaagtctataattctgatgattagatttaacaagttgtaggattagtttttgagaattgga-aatt 27845512  T
Q  158 agagttaagagtgatgattg 177  Q
    || ||||| |||||| ||||    
T  27845511 agggttaaaagtgataattg 27845492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 170
Target Start/End: Complemental strand, 26393381 - 26393264
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||| |||||||||||||| || |||||||||||  |||| ||||| | ||| |||  |||  |||||||| ||||||||||||| ||||||||||| |    
T  26393381 gatttgttaaggtaagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaagttgtaggtttag-ttttgagaattgg 26393283  T
Q  152 agaattagagttaagagtg 170  Q
    | |||||| ||||||||||    
T  26393282 aaaattagggttaagagtg 26393264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 43946518 - 43946629
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||  ||  ||||||||||  |||| || |||||||| ||| ||||  ||||||||||||||||| |||||||| ||||||| || |||||    
T  43946518 taaggtaagggtaagacaaacattcaattttcttaagcctatgattctgataattagatttaacatgttgtaggattagttttggagaattgga-aatta 43946616  T
Q  159 gagttaagagtga 171  Q
    | |||||||||||    
T  43946617 gggttaagagtga 43946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 7187477 - 7187395
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    |||||||||||||| || |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||| |||||||||||    
T  7187477 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagttt 7187395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 22172978 - 22173060
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    |||||||||||||| || |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||| |||||||||||    
T  22172978 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattatgataattagatttaacatgttggaggtttagttt 22173060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 23068455 - 23068520
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| | ||||| ||||||    
T  23068455 tgaaaattgtatttaacatgttgtaggtttag-ttttgaggatttgggaattcgggttaaaagtgat 23068520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 18546136 - 18546260
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||| |||||||||||||| || |||| ||||||  |||| ||||||| ||| |||  |||  ||||| || |||||||| ||||||||||| || |||    
T  18546136 gatttgttaaggtaagggtgagactaacgttcaattttcttaagtctataattctgatgattagatttagcaagttgtaggattagtttttga-aagttg 18546234  T
Q  152 agaattagagttaagagtgatgattg 177  Q
    | |||||| |||||||||||| ||||    
T  18546235 aaaattagggttaagagtgataattg 18546260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 19358943 - 19358868
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    |||||||||||||||| |||| || ||||||  ||||| ||||||| ||||||||| |||||||| ||||| ||||    
T  19358943 taaggtaagggtgggactaacctttaataattctgagtatatgattctgaaaattgaatttaacaagttgtgggtt 19358868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 44072609 - 44072534
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    ||||||||||||| || |||| |||| ||||  | ||| ||||||||||||||||| ||||| || ||||||||||    
T  44072609 taaggtaagggtgagactaactttcactaattctaagtgtatgattttgaaaattgaatttagcaagttgtaggtt 44072534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 3539889 - 3539788
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagt-ctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaat 156  Q
    |||||||||||||||| |||| |||  |||| || |||  ||| ||| ||||||| | |||||||| |||||||||| ||||||||| ||||||||||||    
T  3539889 taaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttg-gaatttgagaat 3539791  T
Q  157 tag 159  Q
    |||    
T  3539790 tag 3539788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 27473513 - 27473414
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttga 152  Q
    ||||||||| ||||||||||| |||| |||||||||  ||||| | ||||| |||| | || ||||||||| |||||||||| || |||| |||||||||    
T  27473513 tttcttaagttaagggtgggactaaccttcaataattatgagtatgtgattctgaaga-tgaatttaacatggttgtaggttgaggtttt-agaatttga 27473416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 14694334 - 14694271
Alignment:
Q  102 attttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaattagagttaa 165  Q
    ||||||||||||| |||||||||| |||||||| ||||||  ||| ||||||||||||| |||||    
T  14694334 attttgaaaattggatttaacatgatgtaggttgtagtttgggag-atttgagaattagggttaa 14694271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 23079869 - 23079901
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaat 86  Q
    ||||||||||||||||||||| |||||||||||    
T  23079869 tttcttaaggtaagggtgggactaacattcaat 23079901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 31346172 - 31346101
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgt-atttaacatgttgt 129  Q
    |||||||||||||| || |||||||||||  |||| || ||||||||||| || |||| ||||||||||||||    
T  31346172 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattttg-aatttgtgatttaacatgttgt 31346101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 34858192 - 34858286
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgaga 154  Q
    |||||||||||||||| |||| ||||||||| |||||| | ||||| |||| | || ||||||||| ||| |||||| || |||| |||||||||||    
T  34858192 taaggtaagggtgggactaaccttcaataattttgagtatgtgattctgaaga-tgaatttaacatggttttaggttgaggtttt-agaatttgaga 34858286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 34873254 - 34873348
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgaga 154  Q
    |||||||||||||||| |||| ||||||||| |||||| | ||||| |||| | || ||||||||| ||| |||||| || |||| |||||||||||    
T  34873254 taaggtaagggtgggactaaccttcaataattttgagtatgtgattctgaaga-tgaatttaacatggttttaggttgaggtttt-agaatttgaga 34873348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 42 - 217
Target Start/End: Complemental strand, 1217 - 1042
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  1217 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttgagtttt 1118  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggtt 217  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  1117 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgcataatataggtt 1042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 5539 - 5372
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5539 tcttaaggtaagggtgggaataacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 5440  T
Q  156 ttagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  5439 ttagggttaagactgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 144; Significance: 8e-76; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 42 - 217
Target Start/End: Original strand, 22683 - 22858
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  22683 ccttgcaatcgatttcttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttgagtttt 22782  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggtt 217  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  22783 tgagaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgcataatataggtt 22858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 20507 - 20688
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  20507 ccttgcaatcgatttcttagggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttcagtttt 20606  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||||    
T  20607 tgagaattttagaattaaggttaagagtgatgattgtgatgattttgaatcaaagtgaagttgaataatataggttgttttt 20688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 14898 - 14798
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  14898 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 14799  T
Q  158 a 158  Q
    |    
T  14798 a 14798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 57 - 223
Target Start/End: Original strand, 34 - 200
Alignment:
Q  57 cttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaat 156  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34 cttaaggtaagggtgggactaacattcaataatcttgagtctgtgattctgaaaattgtatttaacatgttgtaggtttagtttttgaaaatttgagaat 133  T
Q  157 tagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  134 tagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 10843 - 10662
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  10843 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatattgtaggtttagtttt 10744  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  10743 tgagaatttgagaattaggcttaagagtgacgattgtgatgattttgaatgaaagtgaagttgaataatataggttgttttt 10662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 28036 - 27916
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattt-tgaaaattgtatttaacatgttgtaggtttagtttttgagaattt 150  Q
    ||||| ||||||||||||||||| || | |||||||||  | ||| | | | || |||||||||||||||||||||||||||||||| ||||||| ||||    
T  28036 gatttattaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtttag-ttttgaggattt 27938  T
Q  151 gagaattagagttaagagtgat 172  Q
    |  |||||| ||||| ||||||    
T  27937 ggaaattagggttaaaagtgat 27916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 42894 - 42804
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattt-tgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||| ||||||||||||||||| || | |||||||||  | ||| | | | || ||||||||||||||||||||||||||||||||||||    
T  42894 gatttattaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtttagtttt 42804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 685 - 504
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||||| || ||||||||| |||||||||||||||| |||||||||||||||||||    
T  685 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatctcgactctatgattctgaaaattgtatttaatatgttgtaggtttagtttt 586  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  585 tgagaatttgagaattagggttaagagtgatgattgtgattattttgaatgaaagtgaagttgaataatataggttgctttt 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 7293 - 7129
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 7194  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  7193 gggttaagagtgatatttgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 7129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 137; Significance: 1e-71; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 501906 - 501742
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  501906 taaggtaagtgtggtactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 501807  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  501806 gggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 501742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 447466 - 447348
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| |||||||||||||||| || ||||    
T  447466 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattgga-aatt 447368  T
Q  158 agagttaagagtgatgattg 177  Q
    || |||||||||||| ||||    
T  447367 agggttaagagtgataattg 447348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 498375 - 498258
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||| ||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||||||| |||||||||||||||| || |||||    
T  498375 taaggtaatggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattgga-aatta 498277  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  498276 gggttaagagtgataattg 498258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 499110 - 498996
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtt-tagtttttgagaatttgagaat 156  Q
    |||||||||||||||| |||| ||||||||| |||||| | ||||| |||||| || ||||||||| |||||||||| |||||||  |||||||| ||||    
T  499110 taaggtaagggtgggactaaccttcaataattttgagtatgtgattctgaaaa-tgaatttaacatggttgtaggttgtagtttt--agaatttgggaat 499014  T
Q  157 tagagttaagagtgatga 174  Q
    ||| ||||| ||| ||||    
T  499013 tagggttaaaagtaatga 498996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 43169 - 43332
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43169 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaatattgtacttaacatgttgtaggtttagtttttgagaatttgagaattag 43268  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  43269 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 43332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 16757 - 16924
Alignment:
Q  56 tcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaa 155  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16757 tcttaaggtaagggtgagactaacattcaataatcttgagtctatgattctaaaaattgtatttaacatgttgtaggttgagtttttgagaatttgagaa 16856  T
Q  156 ttagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  16857 ttagggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 16924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 95359 - 95231
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  95359 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 95260  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  95259 agggttaaaagtgattatt-tgatgatttt 95231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 223
Target Start/End: Complemental strand, 60777 - 60614
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  60777 aaggtaagggtgggactaacattcaataatcttgagtctatgtttctgaaaattttatttaatatgttgtaggtttagtttttgagaatttgagaattag 60678  T
Q  160 agttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  60677 ggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgaataatataggttgctttt 60614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 2113 - 1931
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  2113 ccttgcaatcgatttcttaaggtaagggtgagactaacattcaataatcttaagtctatgattctgaaaattgtatttaatatgttataggtttagtttt 2014  T
Q  142 tgagaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtg-acgttgaataatacaggttgctttt 223  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  2013 tgagaatttgagaatcagggttaagagtgatgattgtgatgattttgaatgaaagtgaaagttgaataatataggttgctttt 1931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 7627 - 7465
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7627 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgagaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 7528  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgct 220  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  7527 agggttaagagtgatgattgtgatgattttgaatgaaagtgaagttgagtaatataggttgct 7465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 8774 - 8610
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||| ||||||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8774 taagttaagggtggaactaacattcaataatcttgagtgtatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 8675  T
Q  159 gagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    | |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  8674 gggttaagagtgatgattgtgatgattttgaatgaatgtgaagttgaataatataggttgctttt 8610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 36585 - 36739
Alignment:
Q  45 tgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttga 144  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  36585 tgcaatcgatttcttaaggtaagtgtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttaa 36684  T
Q  145 gaatttgagaattagagttaagagtgatgattgtgatgattttgaatgaaagtga 199  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36685 aaatttgagaattagggttaagagtgatgattgtgatgattttgaatgaaagtga 36739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 31160 - 31055
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||| |||||||||  ||||| | | ||| ||||||||| |||||||| |||||||||| |||  |||| ||||||| |||||    
T  31160 taaggtaagggtgggactaaccttcaataattctgagtatgtaattctgaaaattggatttaacaagttgtaggttgtag--tttgggaatttgggaatt 31063  T
Q  158 agagttaa 165  Q
    || |||||    
T  31062 agggttaa 31055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 3663 - 3524
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3663 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagtttttgagaatttgagaatt 3564  T
Q  158 agagttaagagtgatgattgtgatgattttgaatgaaagt 197  Q
    || |||||||||||||||||||||||||||||||||||||    
T  3563 agggttaagagtgatgattgtgatgattttgaatgaaagt 3524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 185110 - 184978
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  185110 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 185011  T
Q  160 agttaagagtgatgattgtgatgattttgaatg 192  Q
     ||||||||||||||||||||||||||||||||    
T  185010 ggttaagagtgatgattgtgatgattttgaatg 184978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 118750 - 118849
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| |||| |||||||||||||||| | ||| | || |||||  ||||||||||||| |||||||| ||||||||||| |||    
T  118750 tttcttaaggtaagggtgggactaaccttcaataatcttgagtatgtgaatctg-aaattagatttaacatgttggaggtttag-ttttgagaattggag 118847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 106; Significance: 4e-53; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 42 - 175
Target Start/End: Complemental strand, 22031 - 21898
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||||||||  ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22031 ccttgcaatcaatttcttaaggtaagggtgagactaacattcaataatcttgagtctatgattgtgaaaattgtatttaacatgttgtaggtttagtttt 21932  T
Q  142 tgagaatttgagaattagagttaagagtgatgat 175  Q
    |||||||||||||||||| ||||| |||||||||    
T  21931 tgagaatttgagaattagggttaacagtgatgat 21898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 158733 - 158621
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  158733 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 158634  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  158633 agggttaaaagtg 158621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 30075 - 30010
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||    
T  30075 tgaaaattgtatttaacatgttgtaggtttag-ttttgaggatttgggaattagagttaaaagtgat 30010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 6164 - 6046
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||| |||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6164 ttaaggtaaaggtgagactaacattcaataattttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 6065  T
Q  158 agagttaagagtgatgatt 176  Q
    || ||||||||||||||||    
T  6064 agggttaagagtgatgatt 6046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 2918 - 3044
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  2918 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaaca-gttgtaggtatagtttttgagaatttgggaatta 3016  T
Q  159 gagttaagagtgatgattgtgatgatttt 187  Q
    | ||||| |||||| ||| ||||||||||    
T  3017 gggttaaaagtgattatt-tgatgatttt 3044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 83; Significance: 2e-39; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 135161 - 135047
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  135161 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaatt 135062  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  135061 agggttaaaagtgat 135047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 137630 - 137516
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  137630 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaatt 137531  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  137530 agggttaaaagtgat 137516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 140099 - 139985
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  140099 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaatt 140000  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  139999 agggttaaaagtgat 139985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 142568 - 142454
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  142568 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaatt 142469  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  142468 agggttaaaagtgat 142454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 145037 - 144923
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  145037 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaatt 144938  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  144937 agggttaaaagtgat 144923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 3053 - 3127
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    ||||||||||||||| |||| |||||||||  | ||| ||| ||| ||||||||| |||||||| ||||||||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagtgtattattctgaaaattgaatttaacaagttgtaggtt 3127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 56220 - 56332
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  56220 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttttagtttttgagaatttgggaatt 56319  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  56320 agggttaaaagtg 56332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 21699 - 21585
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  21699 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgagaatt 21600  T
Q  158 agagttaagagtgat 172  Q
    || ||||| ||||||    
T  21599 agggttaaaagtgat 21585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 19221 - 19120
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||  ||||||||||||||||| ||||||||||||||||||| |||||    
T  19221 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattagatttaacatgttgtaggttttagtttttgagaatttgggaatt 19122  T
Q  158 ag 159  Q
    ||    
T  19121 ag 19120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 52 - 187
Target Start/End: Complemental strand, 23045 - 22909
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatc-ttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatt 149  Q
    ||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||||    
T  23045 gatttattaaggtaagggtgggactaacattcaataatctttaagtctatgattctaaaaattggatttaacatgttgtaggttatagtttttgagaatt 22946  T
Q  150 tgagaattagagttaagagtgatgattgtgatgatttt 187  Q
    || ||||||| ||||| |||||| ||| ||||||||||    
T  22945 tgggaattagggttaaaagtgattatt-tgatgatttt 22909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 38770 - 38642
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  38770 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatt 38671  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  38670 agggttaaaagtgattatt-tgatgatttt 38642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 38952 - 39080
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  38952 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttagttttttagaatttgagaatt 39051  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  39052 agggttaaaagtgattatt-tgatgatttt 39080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 12238 - 12110
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  12238 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgagaatt 12139  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  12138 agggttaaaagtgattatt-tgatgatttt 12110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 11915 - 11828
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaa 147  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11915 aaggtacgggtgagactaacattcaataatcttgagtctatgattttgaaaattgtatttaatatgttgtaggtttagtttttgagaa 11828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 6893 - 6765
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  | ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  6893 taaggtaagggtgagactaacattcaataatcttaagtcattaattctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgagaatt 6794  T
Q  158 agagttaagagtgatgattgtgatgatttt 187  Q
    || ||||| |||||| ||| ||||||||||    
T  6793 agggttaaaagtgattatt-tgatgatttt 6765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 7992 - 7871
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaattt 150  Q
    ||||| |||| |||||||||||| ||||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||| ||||||||||||||||||    
T  7992 gatttattaaagtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacatgttgtaggttttagtttttgagaattt 7893  T
Q  151 gagaattagagttaagagtgat 172  Q
    | ||||||  ||||| ||||||    
T  7892 gggaattaaggttaaaagtgat 7871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 16385 - 16273
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| ||||||||| ||||||| ||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  16385 taaggtaagggtgggactaacattcattaatcttaagtctattattctgaaaattgcctttaacatgttgtaggtttagtttttgagaatttgggaatta 16286  T
Q  159 gagttaagagtgat 172  Q
    | ||||| ||||||    
T  16285 g-gttaaaagtgat 16273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 172
Target Start/End: Original strand, 5315 - 5436
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaattt 150  Q
    ||||| |||| |||||||||||| ||||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||| ||||||||||||||||||    
T  5315 gatttattaaagtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacatgttgtaggttttagtttttgagaattt 5414  T
Q  151 gagaattagagttaagagtgat 172  Q
    | ||||||  ||||| ||||||    
T  5415 gggaattaaggttaaaagtgat 5436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 172
Target Start/End: Original strand, 12 - 133
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaattt 150  Q
    ||||| |||||||||||||| || ||| ||||||||||||| ||||||||||| | ||||||| ||||||||||||||||| ||||||||||||||||||    
T  12 gatttattaaggtaagggtgagactaatattcaataatcttaagtctatgattctaaaaattggatttaacatgttgtaggttttagtttttgagaattt 111  T
Q  151 gagaattagagttaagagtgat 172  Q
    | |||| || ||||| ||||||    
T  112 gggaatgagggttaaaagtgat 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 10194 - 10082
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  10194 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgagaatt 10095  T
Q  158 agagttaagagtg 170  Q
    || ||||||||||    
T  10094 agggttaagagtg 10082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 191798 - 191915
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  191798 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttagtttttgagaatttga-aatta 191896  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  191897 gggttaagagtgataattg 191915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 14342 - 14230
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  14342 taaggtaagggtgggactaacattcaataatcttaagtcattgattctcaaaattggatttaacatgttgtaggttttcgtttttgagaatttgagaatt 14243  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  14242 agggttaaaagtg 14230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 8447 - 8335
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||| ||||||||| | ||||||||| ||||||| |||| || ||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  8447 taagataagggtggaactaacattcattaatcttaagtccattattctgaaaattgtctttaacatgttgaaggtttagtttttgagaatttgagaatta 8348  T
Q  159 gagttaagagtgat 172  Q
    | ||||| ||||||    
T  8347 g-gttaaaagtgat 8335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 531 - 419
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||    
T  531 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttcagaatt 432  T
Q  158 agagttaagagtg 170  Q
    || ||||| ||||    
T  431 agggttaaaagtg 419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 41348 - 41248
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  41348 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttcgtttttgagaatttgggaatt 41249  T
Q  158 a 158  Q
    |    
T  41248 a 41248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 159
Target Start/End: Complemental strand, 4923 - 4817
Alignment:
Q  53 atttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttga 152  Q
    |||||||||||||||||||||| || ||||||||  | || ||||||||||| |||   |||||||||||| |||||||| |||||||||||||||||||    
T  4923 atttcttaaggtaagggtgggactagcattcaattctattaagtctatgattctgatggttgtatttaacaggttgtaggattagtttttgagaatttga 4824  T
Q  153 gaattag 159  Q
    |||||||    
T  4823 gaattag 4817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 220327 - 220449
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||||||||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||  ||||||||||||||||||||||||    
T  220327 gatttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg--gtaggtttagtttttgagaatttg 220424  T
Q  152 agaattagagttaagagtgatgattg 177  Q
    | |||||| |||||||||||| ||||    
T  220425 a-aattagggttaagagtgataattg 220449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 57; Significance: 6e-24; HSPs: 3)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 38261 - 38333
Alignment:
Q  151 gagaattagagttaagagtgatgattgtgatgattttgaatgaaagtgacgttgaataatacaggttgctttt 223  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  38261 gagaattagggttaagagtgatgattgtgatgattttgaataaaagtgaagttgaataatataggttgctttt 38333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 9159 - 9044
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| ||  ||||||| | | ||||  ||||| ||||||||||||||| |||||||||||||| ||||||    
T  9159 taaggtaagggtgggactaacattcaatcttcttaagcgtatgattctaataattccatttagcatgttgtaggtttaatttttgagaatttgggaatta 9060  T
Q  159 gagttaagagtgatga 174  Q
    | ||||| ||||||||    
T  9059 gggttaaaagtgatga 9044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 1990 - 1896
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgaga 154  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| |||| | || ||||||||| |||||||||| || |||| |||||||||||    
T  1990 taaggtaagggtgggactaaccttcaataattctgagtatgtgattatgaaga-tgaatttaacatggttgtaggttgaggtttt-agaatttgaga 1896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 2239 - 2132
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||||||||||||||||||||| || ||||||||  | || ||||||||||| | |   |||||||||||| |||||||| ||||||||||||||||||    
T  2239 gatttcttaaggtaagggtgggactagcattcaattctattaagtctatgattctaatggttgtatttaacaggttgtaggattagtttttgagaatttg 2140  T
Q  152 agaattag 159  Q
    ||||||||    
T  2139 agaattag 2132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 10387 - 10273
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| ||| ||||| ||||| |||||||| ||||||| ||||||||||||| ||||||    
T  10387 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattgcatttagcatgttgttggtttag-ttttgagaatttgggaatta 10289  T
Q  159 gagttaagagtgatga 174  Q
    | ||||| ||||||||    
T  10288 gggttaaaagtgatga 10273  T

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Target: scaffold0006 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 98006 - 97899
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||||||||||||||||||| | |||||||||||  | || ||||||||||| |||   |||||||||||| |||||||| ||| ||||||||||||||    
T  98006 gatttcttaaggtaagggtggaactaacattcaattctattaagtctatgattctgatggttgtatttaacaggttgtaggattaatttttgagaatttg 97907  T
Q  152 agaattag 159  Q
    ||||||||    
T  97906 agaattag 97899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 107284 - 107177
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||||||||||||||||||| | |||||||||||  | || ||||||||||| |||   |||||||||||| |||||||| ||| ||||||||||||||    
T  107284 gatttcttaaggtaagggtggaactaacattcaattctattaagtctatgattctgatggttgtatttaacaggttgtaggattaatttttgagaatttg 107185  T
Q  152 agaattag 159  Q
    ||||||||    
T  107184 agaattag 107177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 2470 - 2583
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgagaat 156  Q
    ||||||||||||||||| |||| |||||||||||||||| | ||| | || |||||| ||||||||| |||||||||| ||||||| |||||||||||||    
T  2470 ttaaggtaagggtgggactaaccttcaataatcttgagtatgtgaatctg-aaattgaatttaacatggttgtaggttaagttttttagaatttgagaat 2568  T
Q  157 tagagttaagagtga 171  Q
    ||| ||||| |||||    
T  2569 tagggttaaaagtga 2583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 8221 - 8127
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtagg-tttagtttttgagaatttga 152  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  8221 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttttggttttagagaatttga 8127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 7260 - 7144
Alignment:
Q  60 aaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattag 159  Q
    ||||||||||||||| |||||||||||  |||| || |||||||| |||  ||| |||||||||||||||||||||||||| |||| |||||  ||||||    
T  7260 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattatatttaacatgttgtaggtttagtttgtgag-atttggaaattag 7162  T
Q  160 agttaagagtgatgattg 177  Q
     |||||||||||| ||||    
T  7161 ggttaagagtgataattg 7144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 1609 - 1492
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||| || ||||||| |||||||||||| |||| || |||||||| |||  |||  ||||||||||||||||||||||||| | |||||| || |||||    
T  1609 taaggcaaaggtgggactaacattcaatattcttaagcctatgattctgatgattagatttaacatgttgtaggtttagtttattagaattgga-aatta 1511  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  1510 gggttaagagtgataattg 1492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 165620 - 165728
Alignment:
Q  63 gtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagt 162  Q
    |||||||||||| | ||||||| ||||||| || |||| ||| |||||||||| |||||||||||||| |||||||| ||||||||||| ||||||| ||    
T  165620 gtaagggtgggacttacattcattaatcttaagactattattctgaaaattgtctttaacatgttgtatgtttagttcttgagaatttgggaattag-gt 165718  T
Q  163 taagagtgat 172  Q
    ||| ||||||    
T  165719 taaaagtgat 165728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 78 - 2
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggttt 135  Q
    |||||||||||||||| ||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||||||||    
T  78 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 33837 - 33913
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggttt 135  Q
    ||||||||||||| || ||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||||    
T  33837 taaggtaagggtgagactaacattcaataatcttaagtcattgattttgaaaattggatttaacatgttgtaggttt 33913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 4270 - 4150
Alignment:
Q  66 agggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaa 165  Q
    ||||||||| ||||||||||||||||| ||||  ||||| ||||||||| |||||| |||||||| ||||   ||||||||||||| ||||||| |||||    
T  4270 agggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatatgttgtaagttttagttttgagaatttgggaattagggttaa 4171  T
Q  166 gagtgatgattgtgatgatttt 187  Q
     | |||| ||| ||||||||||    
T  4170 aattgattatt-tgatgatttt 4150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 264 - 142
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    |||||||||||||||||| || |||||||||||  |||| || || | ||| |||  |||  ||||||||||||||||| |||||||||||||||| ||     
T  264 tttcttaaggtaagggtgcgactaacattcaatcttcttaagcctttaattctgatgattagatttaacatgttgtagggttagtttttgagaattgga- 166  T
Q  154 aattagagttaagagtgatgattg 177  Q
    |||||| |||||||||||| ||||    
T  165 aattagggttaagagtgataattg 142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 1020 - 903
Alignment:
Q  47 caattgatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgaga 146  Q
    |||| |||| |||||||||||| ||||| || ||||||||  |||| ||||||| ||| |||  |||  ||||||||||| ||||||||||||||||||     
T  1020 caatcgattccttaaggtaaggctgggactagcattcaattttcttaagtctataattatgatgattagatttaacatgt-gtaggtttagtttttgagg 922  T
Q  147 atttgagaattagagttaa 165  Q
    ||||||||||||| |||||    
T  921 atttgagaattagggttaa 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 17335 - 17444
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    |||||||||| ||||| ||||||||| |  |||| ||  ||||||| ||| ||||  ||||||||| ||||||||||||||||||||||||||| |||||    
T  17335 taaggtaaggttgggactaacattcagtcttcttaagcatatgattctgataattagatttaacattttgtaggtttagtttttgagaatttga-aatta 17433  T
Q  159 gagttaagagt 169  Q
    | |||||||||    
T  17434 gtgttaagagt 17444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 22102 - 22037
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||    
T  22102 tgaaaattgtatttaacatgttgtaggtttag-ttttgaggatttgggaattagagttaaaagtgat 22037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 33668 - 33769
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||| ||||| || ||||||||  | || |||||||||||  ||   |||||||||||| |||||||| ||||||||||||||||||||||||    
T  33668 ttaaggtaaggctgggactagcattcaattctattaagtctatgattccgatggttgtatttaacaggttgtaggattagtttttgagaatttgagaatt 33767  T
Q  158 ag 159  Q
    ||    
T  33768 ag 33769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 28328 - 28404
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    ||||||||||||||||| || | |||||||||  ||||| ||||||| ||||||||| |||||||| ||||||||||    
T  28328 ttaaggtaagggtgggactacccttcaataattctgagtatatgattctgaaaattggatttaacaagttgtaggtt 28404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 1129 - 1042
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||||||||||||||| |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||| ||||||| ||||    
T  1129 tttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttaatttt 1042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 28691 - 28812
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    ||||||||||||||||||||| |||||||||||  |||| || || | ||| |||  |||  |||||||| ||||||||||||| ||||||||||| ||     
T  28691 tttcttaaggtaagggtgggactaacattcaatcttcttaagcctttaattctgatgattagatttaacaagttgtaggtttag-ttttgagaattgga- 28788  T
Q  154 aattagagttaagagtgatgattg 177  Q
    |||||| |||||||||||| ||||    
T  28789 aattagggttaagagtgataattg 28812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 2020 - 2121
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaat 156  Q
    ||||| ||||||||||| |||| |||| ||||  | ||| ||||||||||||||||| ||||||||||||||||||| ||||||| || |||||| ||||    
T  2020 ttaagctaagggtgggattaaccttcactaattctaagtgtatgattttgaaaattgaatttaacatgttgtaggttgtagttttgga-aatttgggaat 2118  T
Q  157 tag 159  Q
    |||    
T  2119 tag 2121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 581 - 464
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || |||||||||||  |||| |  || ||||| |||  |||  ||||||||||||||||| |||||||||||||||| || |||||    
T  581 taaggtaagggtgagactaacattcaatcttcttcaacctttgattatgatcattagatttaacatgttgtagggttagtttttgagaattgga-aatta 483  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  482 gggttaagagtgataattg 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 13101 - 13019
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||| |||||||||||    
T  13101 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagttt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 30658 - 30593
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  ||||| |||||| ||||||    
T  30658 tgaaaattgtatttaacatgttgtaggtttag-ttttgagaatttggaaattatagttaaaagtgat 30593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 31648 - 31752
Alignment:
Q  71 gggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtg 170  Q
    |||| |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||||||||||| ||||||||||||||| |||||| |||||||| |    
T  31648 gggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggttta-tttttgagaatttga-aattagggttaagaggg 31745  T
Q  171 atgattg 177  Q
    || ||||    
T  31746 ataattg 31752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 75018 - 75134
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttg 151  Q
    ||||| ||||||||||||||||| |||||||||||  |||| ||  ||| ||| | | ||||  |||||||||||||||||||||| |||||||||||||    
T  75018 gatttattaaggtaagggtgggactaacattcaatcttcttaagcatattattcttataattagatttaacatgttgtaggtttag-ttttgagaatttg 75116  T
Q  152 agaattagagttaagagtg 170  Q
     ||||||| ||||| ||||    
T  75117 -gaattagggttaaaagtg 75134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 120958 - 120893
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||    
T  120958 tgaaaattgtatttaacatgttgtaggtttag-ttttgaggatttgtgaattagggttaaaagtgat 120893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 21703 - 21634
Alignment:
Q  102 attttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  ||||| ||||||    
T  21703 attttgaaaattgtatttaacatgttgtaggtttagttttt-aggatttgggaattaaggttaaaagtgat 21634  T

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Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 158822 - 158927
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||| |||||||||  ||||| ||||||| | ||||||| |||||||| |||||||||| ||| ||||| ||||||| |||||    
T  158822 taaggtaagggtgggactaaccttcaataattctgagtatatgattctaaaaattggatttaacaagttgtaggttgtag-ttttgggaatttgggaatt 158920  T
Q  158 agagtta 164  Q
    || ||||    
T  158921 agggtta 158927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 1046 - 1133
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||||||||||||||| |||||||||||  |||| || |||||||| |||  |||  ||||||||||||| ||||||| ||||    
T  1046 tttcttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgattattagatttaacatgttggaggtttaatttt 1133  T

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Target: scaffold0452 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 12670 - 12735
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| | ||||| ||||| ||||||    
T  12670 tgaaaattgtatttaacatgttgtaggtttag-ttttgaggatttggggattagggttaaaagtgat 12735  T

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Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 42348 - 42266
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||| | |||||||||    
T  42348 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggacgtttagttt 42266  T

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Target: scaffold0046 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 16085 - 16203
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || |||||||||||  |||| ||||||| |||  ||  |||  ||||| || |||||||| ||||||||||| | || ||||||||    
T  16085 taaggtaagggtgagactaacattcaattttcttaagtctataattcggatgattagatttagcaagttgtaggattagtttttgaaagttggagaatta 16184  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  16185 gggttaagagtgataattg 16203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 25272 - 25390
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaatta 158  Q
    ||||||||||||| || |||||||||||  |||| |||| || ||| |||  |||  ||||| || |||||||| ||||||||||| | || ||||||||    
T  25272 taaggtaagggtgagactaacattcaattttcttaagtcgataattctgatgattagatttagcaagttgtaggattagtttttgaaagttggagaatta 25371  T
Q  159 gagttaagagtgatgattg 177  Q
    | |||||||||||| ||||    
T  25372 gggttaagagtgataattg 25390  T

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Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 135504 - 135609
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttgagaatt 157  Q
    |||||||||||||||| |||| |||| ||||  | ||| ||| ||| ||||||||| |||||||| |||||||||| ||| ||||| ||||||| |||||    
T  135504 taaggtaagggtgggactaaccttcactaattctaagtgtataattctgaaaattgaatttaacaggttgtaggttgtag-ttttgggaatttgggaatt 135602  T
Q  158 agagtta 164  Q
    |||||||    
T  135603 agagtta 135609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 83048 - 82967
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    |||||||||||||||| |||||||||||  |||| || |||||||| | | ||||  ||||||||||||| |||||||||||    
T  83048 taaggtaagggtgggattaacattcaatcttcttaagcctatgattctaataattagatttaacatgttggaggtttagttt 82967  T

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Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 81624 - 81519
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt-tagtttttgagaatttga 152  Q
    ||||||||||||||||||||| |||| |||| ||||  | | |  |||||| | ||||||| |||||||| |||||||||| ||| ||||| |||||||     
T  81624 tttcttaaggtaagggtgggactaaccttcactaattctaaatggatgattctaaaaattgaatttaacaggttgtaggttgtag-ttttgggaatttgg 81526  T
Q  153 gaattag 159  Q
    |||||||    
T  81525 gaattag 81519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 40218 - 40285
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    ||||||||||||||||| |||||||||||  |||| || ||||||||||| |||||| |||||||||||    
T  40218 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattttg-aaattggatttaacatgt 40285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 42724 - 42653
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgt-atttaacatgttgt 129  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||| || || |||| ||||||||||||||    
T  42724 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aatttgtgatttaacatgttgt 42653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 128165 - 128209
Alignment:
Q  127 tgtaggtttagtttttgagaatttgagaattagagttaagagtga 171  Q
    |||||| |||||||| |||||||||||||||||||||||||||||    
T  128165 tgtaggattagttttagagaatttgagaattagagttaagagtga 128209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 8694 - 8619
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    |||||||||||||||| |||| |||| ||||  | ||| ||||||| ||||||||| |||||||| ||||||||||    
T  8694 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaacaggttgtaggtt 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 141
Target Start/End: Original strand, 23123 - 23206
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    |||||||||||||| || |||||||||||  |||| || |||||||| ||| ||||  ||||||||||||| ||||||| ||||    
T  23123 ttaaggtaagggtgtgactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttaatttt 23206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 476 - 551
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    ||||||||||||| ||  ||||||||||  |||| || |||||||| |||||||||||||||||| | ||||||||    
T  476 taaggtaagggtgagacgaacattcaatcttcttaagcctatgattctgaaaattgtatttaacaagatgtaggtt 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 54807 - 54929
Alignment:
Q  54 tttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgag 153  Q
    |||||||||||||| |||||| |||||||||||  ||||    || | ||| |||  |||  |||||||| |||||||| |||||||||||||||| ||     
T  54807 tttcttaaggtaagagtgggactaacattcaatcttcttatacctttaattatgatgattagatttaacaagttgtagggttagtttttgagaattgga- 54905  T
Q  154 aattagagttaagagtgatgattg 177  Q
    |||||| |||||||||||| ||||    
T  54906 aattagggttaagagtgataattg 54929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 141
Target Start/End: Complemental strand, 72482 - 72399
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||||||||||| |||||||||||  |||| || ||| |||| ||| ||||   |||||||||||| ||||||||||||    
T  72482 ttaaggtaagggtgggactaacattcaatcttcttaagcctacgattctgataattaggtttaacatgttggaggtttagtttt 72399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 12446 - 12346
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtt-tagtttttgagaatttgagaat 156  Q
    ||||||||||||| || || ||||||||  |||| ||||||||||| || |||||| ||||||||| |||||||||| ||||||| || |||||||||||    
T  12446 taaggtaagggtgagactagcattcaatcttcttaagtctatgattctg-aaattgaatttaacatggttgtaggttgtagttttgga-aatttgagaat 12349  T
Q  157 tag 159  Q
    |||    
T  12348 tag 12346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 3893 - 4006
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgaga-at 156  Q
    ||||||||||| |||| |||| |||||||||  ||||| | | ||| ||||||||| ||||||||| |||||||||| || |||| ||||||||||| ||    
T  3893 taaggtaagggagggactaaccttcaataattatgagtatgtaattctgaaaattgaatttaacatggttgtaggttgaggtttt-agaatttgagagat 3991  T
Q  157 tagagttaagagtga 171  Q
    ||| ||||| |||||    
T  3992 tagggttaaaagtga 4006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 18857 - 18943
Alignment:
Q  63 gtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaatt 149  Q
    ||||||||| || |||||||||||  |||| ||||||| ||| |||  |||  |||||||| |||||||| ||||||||||||||||    
T  18857 gtaagggtgagactaacattcaattttcttaagtctataattctgatgattagatttaacaagttgtaggattagtttttgagaatt 18943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 37282 - 37367
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttga 144  Q
    |||||||||||||| || |||||||||||  |||| || |||||||| |||  |||  |||||||||| ||||||||||||||||||    
T  37282 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg-tgtaggtttagtttttga 37367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 126795 - 126760
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||||||||||||||||||||| ||||||||||||    
T  126795 tgaaaattgtatttaacatgttgcaggtttagtttt 126760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 2021 - 2110
Alignment:
Q  52 gatttcttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttt 141  Q
    ||||| ||||||||||||||||| |||||||||||  |||| ||  ||||||| ||| ||||  ||||||||||||  ||||||| ||||    
T  2021 gatttattaaggtaagggtgggactaacattcaatcttcttaagcttatgattctgataattagatttaacatgttcgaggtttaatttt 2110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 9854 - 9759
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttttt--gagaatttga 152  Q
    |||||||||||||| || |||||||||||  |||| || |||||||| |||  |||  |||||||||| ||||||||||||||||  ||||||||||    
T  9854 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg-tgtaggtttagttttttggagaatttga 9759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 550 - 475
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtt 134  Q
    |||||||||||||| || || |||||| | ||||| ||||||| ||| ||||| ||| |||||||||||||||||||    
T  550 ttaaggtaagggtgagactatcattcagtgatcttaagtctataattctgaaa-ttggatttaacatgttgtaggtt 475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 5418 - 5351
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgt 126  Q
    |||||||||||||||| |||| |||| ||||  | ||| ||||||| ||||||||| |||||||||||    
T  5418 taaggtaagggtgggactaaccttcactaattctaagtgtatgattctgaaaattgaatttaacatgt 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 55993 - 55888
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgagaatt 157  Q
    ||||||||||||| || |||| |||||||||  ||||| | ||||| || |||||| ||||||||| |||||||||| |  |||| ||||||||||||||    
T  55993 taaggtaagggtgagactaaccttcaataattctgagtatgtgattctg-aaattgaatttaacatggttgtaggttaaagtttt-agaatttgagaatt 55896  T
Q  158 agagttaa 165  Q
    || |||||    
T  55895 agggttaa 55888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 333289 - 333206
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttttt 142  Q
    ||||||||||||| || |||||||||||  |||| ||||||| ||| |||  |||  |||||||| |||||||| |||||||||    
T  333289 taaggtaagggtgagactaacattcaattttcttaagtctataattctgatgattagatttaacaagttgtaggattagttttt 333206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 7559 - 7495
Alignment:
Q  106 tgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgat 172  Q
    |||||| |||||||||||||||||| |||||| ||||||| ||||| ||||||| ||||| ||||||    
T  7559 tgaaaaatgtatttaacatgttgtaagtttag-ttttgaggatttgggaattag-gttaaaagtgat 7495  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 51328 - 51366
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtc 97  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  51328 taaggtaagggtgggactaacattcaataatcttaagtc 51366  T

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Target: scaffold1439 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 1126 - 1045
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 140  Q
    ||||||||||||| || |||||||||||  |||| || |||||||| | | ||||  ||||||||||||  |||||||||||    
T  1126 taaggtaagggtgagactaacattcaatcttcttaagcctatgattctaataattagatttaacatgttagaggtttagttt 1045  T

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Target: scaffold0853 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 9 - 68
Alignment:
Q  116 atttaacatgttgtaggtttagtttttgagaatttgagaattagagttaagagtgatgattg 177  Q
    |||||||| ||||||||||||| ||||||||||| || |||||| |||||||||||| ||||    
T  9 atttaacaagttgtaggtttag-ttttgagaattgga-aattagggttaagagtgataattg 68  T

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Target: scaffold0601 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 179 - 216
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaac 79  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  179 ccttgcaatcgatttcttaaggtaagggtgggactaac 216  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 160279 - 160316
Alignment:
Q  42 ccttgcaattgatttcttaaggtaagggtgggagtaac 79  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  160279 ccttgcaatcgatttcttaaggtaagggtgggactaac 160316  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 10762 - 10837
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtt 134  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| || |||||| ||||||||| ||||||||||    
T  10762 taaggtaagggtgggactaaccttcaataattatgagtatgtgattctg-aaattgaatttaacatggttgtaggtt 10837  T

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Target: scaffold0200 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 18646 - 18575
Alignment:
Q  58 ttaaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgt-atttaacatgttgt 129  Q
    ||||||||||||||||| |||||||||||  |||| || |||||||| || || |||| ||||||||||||||    
T  18646 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctg-aatttgtgatttaacatgttgt 18575  T

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Target: scaffold0153 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 5349 - 5255
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgaga 154  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| |||| | || ||||||||| |||||||||| || |||| |||||||||||    
T  5349 taaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaaga-tgaatttaacatggttgtaggttgaggtttt-agaatttgaga 5255  T

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Target: scaffold0153; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 12369 - 12275
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacat-gttgtaggtttagtttttgagaatttgaga 154  Q
    |||||||||||||||| |||| |||||||||  ||||| | ||||| |||| | || ||||||||| |||||||||| || |||| |||||||||||    
T  12369 taaggtaagggtgggactaaccttcaataattatgagtatgtgattctgaaga-tgaatttaacatggttgtaggttgaggtttt-agaatttgaga 12275  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 4082 - 3994
Alignment:
Q  59 taaggtaagggtgggagtaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtttttgagaa 147  Q
    ||||||||||||| || ||||||| |||  |||| || |||||||| ||| ||||  |||||||||||||| || |||| || ||||||    
T  4082 taaggtaagggtgagactaacatttaatcttcttaagcctatgattatgataattagatttaacatgttgtgggattagattatgagaa 3994  T

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