View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11571_low_14 (Length: 498)

Name: NF11571_low_14
Description: NF11571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11571_low_14
NF11571_low_14
[»] chr8 (17 HSPs)
chr8 (1-491)||(16617254-16617744)
chr8 (1-491)||(16638459-16638952)
chr8 (1-491)||(16629578-16630072)
chr8 (31-166)||(15110264-15110399)
chr8 (348-491)||(16629270-16629413)
chr8 (348-491)||(16638151-16638294)
chr8 (365-485)||(16790982-16791102)
chr8 (365-491)||(16792888-16793014)
chr8 (347-491)||(16628961-16629106)
chr8 (347-491)||(16637842-16637987)
chr8 (3-243)||(16793190-16793428)
chr8 (430-483)||(15110398-15110451)
chr8 (429-491)||(3574151-3574213)
chr8 (269-348)||(16629120-16629199)
chr8 (269-348)||(16629428-16629507)
chr8 (269-348)||(16638001-16638080)
chr8 (269-348)||(16638309-16638388)
[»] chr4 (2 HSPs)
chr4 (366-481)||(38877741-38877856)
chr4 (44-330)||(38877946-38878232)


Alignment Details
Target: chr8 (Bit Score: 442; Significance: 0; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 1 - 491
Target Start/End: Complemental strand, 16617744 - 16617254
Alignment:
Q  1 tctcagaaactgaagcatttggtaaacacgccaacactcgggggatttcacccttgaaagaagaaagcaataatcaaaatcaagattctcagaaacctac 100  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16617744 tctcagaaactgaagcatttggtaaacacgccaacactcagaggatttcacccttgaaagaagaaagcaataatcaaaatcaagattctcagaaacctac 16617645  T
Q  101 tcttggttctgaagagctatgtcctgaaatgcaaagattgataaaagtggtaggcctataaacttgtgcttgcaccttatttattttttcattgactcat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16617644 tcttggttctgaagagctatgtcctgaaatgcaaagattgataaaagtggtaggcctataaacttgtgcttgcaccttatttattttttcattgactcat 16617545  T
Q  201 aaaagttgagtgctgatacatagtaaattcaatgaatctgatannnnnnncagataacatctatgtcgcctgaagcactaagtgcagcagttggtgacat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16617544 aaaagttgagtgctgatacatagtaaattcaatgaatctgatatttttttcagataacatctatgtcgcctgaagcactaagtgcagcagttggtgacat 16617445  T
Q  301 tgaaaaggttgtccgtttgaatgaagaaataccaacctttattagtccggaaggtggggtctcaccactgaagtgtttcaattacatttgatattgctgc 400  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  16617444 tgaaaaggttgtccgtttgaatgacgaaataccaacctttactagtccggaaggtggggtctcaccactgaagtgtttcaattacatttgatattgatgt 16617345  T
Q  401 attttcatcagcaagattatgacttgcaatgatttgttcccacaggatggaaaatgcctcgcagctttgttgcaaccacctttgctactcc 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16617344 attttcatcagcaagattatgacttgcaatgatttgttcccacaggatggaaaatgcctcgcagctttgttgcaaccacctttgatactcc 16617254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 491
Target Start/End: Complemental strand, 16638952 - 16638459
Alignment:
Q  1 tctcagaaactgaagcatttggtaaacacgccaacactcgggggatttcacccttgaaagaagaaagcaataatcaaaatcaagattctcagaaacctac 100  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||| |||| |||||||| ||||||||| ||||||| |||||||||||||||    
T  16638952 tctcagaaactgaagcatttggtaaacacaccaacactcagaggatttcaccattgatagaagaaatcaataatcataatcaagtttctcagaaacctac 16638853  T
Q  101 tcttggttctgaagagctatgtcctgaaatgcaaagattgataaaagtggtaggcctataaac--ttgtgcttgcaccttatttattttttcattgactc 198  Q
    ||| ||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||  || ||| | | ||||||| ||||| ||||||||||    
T  16638852 tctcggttctgaagagctaagtcctgaaatgcaacgattgattaaagcggtaggcctataaactattatgccttccccttattgattttgtcattgactc 16638753  T
Q  199 ataaaagttgagtgctgatacatagtaaattcaatgaatctgata-nnnnnnncagataacatctatgtcgcctgaagcactaagtgcagcagttggtga 297  Q
     ||||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||| || ||| ||||||   |||||||||| || ||    
T  16638752 gtaaaagttgagtgctgatacatagtaaattcaatgaatctgatattttttttcagatgacatctatttcacctcaagcacggcgtgcagcagtcggaga 16638653  T
Q  298 cattgaaaaggttgtccgtttgaatgaagaaataccaacctttattagtccggaaggtggggtctcaccactgaagtgtttcaattacatttgatattgc 397  Q
     || ||||||||||| ||| |||| || ||||||||||||||||||||||| |||||||| ||||| ||||| |||||||| || || |||||||||||     
T  16638652 tatagaaaaggttgttcgtatgaacgatgaaataccaacctttattagtcccgaaggtggagtctcgccactaaagtgtttgaactaaatttgatattga 16638553  T
Q  398 tgcattttcatcagcaagattatgacttgcaatgatttgttcccacaggatggaaaatgcctcgcagctttgttgcaaccacctttgctactcc 491  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |  ||||| | |||||||||||| ||||||    
T  16638552 tgcattttcatcagctagattatgacttgcaatgatttgttcccacaggatggaaaatgcgtcccgtctttgatccaaccacctttgatactcc 16638459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 491
Target Start/End: Complemental strand, 16630072 - 16629578
Alignment:
Q  1 tctcagaaactgaagcatttggtaaacacgccaacactcgggggatttcacccttgaaagaagaaagcaataatcaaaatcaagattctcagaaacctac 100  Q
    |||||||||||||||||||||||  |||| ||||||||| | | |||||||| |||| |||||||||||||||||| ||||||| || ||||||||||||    
T  16630072 tctcagaaactgaagcatttggtgcacacaccaacactcagagaatttcaccattgatagaagaaagcaataatcataatcaagtttgtcagaaacctac 16629973  T
Q  101 tcttggttctgaagagctatgtcctgaaatgcaaagattgataaaagtggtaggcctataaac--ttgtgcttgcaccttatttattttttcattgactc 198  Q
    ||| ||||||||||||| | ||||| |||||||| ||||||| |||| ||| |||||||||||  || ||| ||| ||||||||||||| | ||  ||||    
T  16629972 tctcggttctgaagagcaaagtcctcaaatgcaacgattgattaaagcggttggcctataaacttttatgcctgctccttatttattttgtaatcaactc 16629873  T
Q  199 ataaaagttgagtgctgatacatagtaaattcaatgaatctgata--nnnnnnncagataacatctatgtcgcctgaagcactaagtgcagcagttggtg 296  Q
     ||||||||||||||||||||||||||||||||||||||||||||         ||||| ||| |||| || ||| |||||||  |||||||||| || |    
T  16629872 gtaaaagttgagtgctgatacatagtaaattcaatgaatctgatatttttttttcagatgacaactatttcacctcaagcactgggtgcagcagtcggag 16629773  T
Q  297 acattgaaaaggttgtccgtttgaatgaagaaataccaacctttattagtccggaaggtggggtctcaccactgaagtgtttcaattacatttgatattg 396  Q
    | || ||||||||||| ||| |||| || ||||||||||||||||||||||| |||||||| ||||| ||||| |||||||| || || |||||||||||    
T  16629772 atatagaaaaggttgttcgtatgaacgatgaaataccaacctttattagtcccgaaggtggagtctcgccactaaagtgtttgaactaaatttgatattg 16629673  T
Q  397 ctgcattttcatcagcaagattatgacttgcaatgatttgttcccacaggatggaaaatgcctcgcagctttgttgcaaccacctttgctactcc 491  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |  ||||| | |||||||||||| ||||||    
T  16629672 atgcattttcatcagctagattatgacttgcaatgatttgttcccacaggatggaaaatgcgtcccgtctttgatccaaccacctttgatactcc 16629578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 15110264 - 15110399
Alignment:
Q  31 ccaacactcgggggatttcacccttgaaagaagaaagcaataatcaaaatcaagattctcagaaacctactcttggttctgaagagctat--gtcctgaa 128  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||  || ||| |    
T  15110264 ccaacactcagaggatttcacccttgaaagaacaaagcaataatcagaatcaagattctcagaaacctactc--ggttctgaagagctataagtactgca 15110361  T
Q  129 atgcaaagattgataaaagtggtaggcctataaacttg 166  Q
    || |||||||||||  ||||||||||||||||| ||||    
T  15110362 atacaaagattgattgaagtggtaggcctataatcttg 15110399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 348 - 491
Target Start/End: Complemental strand, 16629413 - 16629270
Alignment:
Q  348 cggaaggtggggtctcaccactgaagtgtttcaattacatttgatattgctgcattttcatcagcaagattatgacttgcaatgatttgttcccacagga 447  Q
    |||||||||| ||||| | ||| |||||||| || |||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||    
T  16629413 cggaaggtggagtctcgctacttaagtgtttgaactacatttgatattgatgcattttcctctgcaagattatgacttgcaatgatttgttcccacagga 16629314  T
Q  448 tggaaaatgcctcgcagctttgttgcaaccacctttgctactcc 491  Q
    ||||| |||| ||||  ||||| | ||||| |||||| ||||||    
T  16629313 tggaatatgcgtcgcgtctttgatccaaccgcctttggtactcc 16629270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 348 - 491
Target Start/End: Complemental strand, 16638294 - 16638151
Alignment:
Q  348 cggaaggtggggtctcaccactgaagtgtttcaattacatttgatattgctgcattttcatcagcaagattatgacttgcaatgatttgttcccacagga 447  Q
    |||||||||| ||||| | ||| |||||||| || |||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||    
T  16638294 cggaaggtggagtctcgctacttaagtgtttgaactacatttgatattgatgcattttcctctgcaagattatgacttgcaatgatttgttcccacagga 16638195  T
Q  448 tggaaaatgcctcgcagctttgttgcaaccacctttgctactcc 491  Q
    ||||| |||| ||||  ||||| | ||||| |||||| ||||||    
T  16638194 tggaatatgcgtcgcgtctttgatccaaccgcctttggtactcc 16638151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 365 - 485
Target Start/End: Complemental strand, 16791102 - 16790982
Alignment:
Q  365 ccactgaagtgtttcaattacatttgatattgctgcattttcatcagcaagattatgacttgcaatgatttgttcccacaggatggaaaatgcctcgcag 464  Q
    ||||| |||| ||| ||||||||||  ||||| ||||||||||| ||||||||  ||||||||||| ||||||| ||||||||| |||||||||||||||    
T  16791102 ccactaaagtatttaaattacatttattattgatgcattttcatgagcaagatagtgacttgcaattatttgtttccacaggatagaaaatgcctcgcag 16791003  T
Q  465 ctttgttgcaaccacctttgc 485  Q
    |||||||||||||||||||||    
T  16791002 ctttgttgcaaccacctttgc 16790982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 365 - 491
Target Start/End: Complemental strand, 16793014 - 16792888
Alignment:
Q  365 ccactgaagtgtttcaattacatttgatattgctgcattttcatcagcaagattatgacttgcaatgatttgttcccacaggatggaaaatgcctcgcag 464  Q
    ||||| |||| ||| |||||||||  |||||| ||||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  16793014 ccactaaagtatttaaattacattgaatattgatgcatgttcatgagcaagattctgacttgcaattatttgttcccacaggatggaaaaagcctcgcag 16792915  T
Q  465 ctttgttgcaaccacctttgctactcc 491  Q
    |||| |||||||||| |||| ||||||    
T  16792914 cttttttgcaaccacttttggtactcc 16792888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 347 - 491
Target Start/End: Complemental strand, 16629106 - 16628961
Alignment:
Q  347 ccggaaggtggggtctcaccactgaagtgtttcaattacatttgatattgctgcattttcatcagc-aagattatgacttgcaatgatttgttcccacag 445  Q
    ||||||||||| |||||  | || |||||||| || |||||||||||||| | ||||||||||| | |||||||||||||| ||||||||||||||||||    
T  16629106 ccggaaggtggagtctcttcgctaaagtgtttgaactacatttgatattgattcattttcatcaactaagattatgacttgaaatgatttgttcccacag 16629007  T
Q  446 gatggaaaatgcctcgcagctttgttgcaaccacctttgctactcc 491  Q
    |||||||||||| ||||  ||||| ||||||| |||||| ||||||    
T  16629006 gatggaaaatgcgtcgcgtctttgatgcaaccccctttgatactcc 16628961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 347 - 491
Target Start/End: Complemental strand, 16637987 - 16637842
Alignment:
Q  347 ccggaaggtggggtctcaccactgaagtgtttcaattacatttgatattgctgcattttcatcagc-aagattatgacttgcaatgatttgttcccacag 445  Q
    ||||||||||| |||||  | || |||||||| || |||||||||||||| | ||||||||||| | |||||||||||||| ||||||||||||||||||    
T  16637987 ccggaaggtggagtctcttcgctaaagtgtttgaactacatttgatattgattcattttcatcaactaagattatgacttgaaatgatttgttcccacag 16637888  T
Q  446 gatggaaaatgcctcgcagctttgttgcaaccacctttgctactcc 491  Q
    |||||||||||| ||||  ||||| ||||||| |||||| ||||||    
T  16637887 gatggaaaatgcgtcgcgtctttgatgcaaccccctttgatactcc 16637842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 243
Target Start/End: Complemental strand, 16793428 - 16793190
Alignment:
Q  3 tcagaaactgaagcatttggtaaa--cacgccaacactcgggggatttcacccttgaaagaagaaagcaataatcaaaatcaagattctcagaaacctac 100  Q
    |||| ||||||||||||||||| |  ||| |||||||||   ||||||| |||||||   |||||| ||||||||||||||||||||||| |||||||||    
T  16793428 tcagcaactgaagcatttggtagatacacaccaacactcaaaggatttctcccttgattaaagaaaccaataatcaaaatcaagattctcggaaacctac 16793329  T
Q  101 tcttggttctgaagagctatgtcctgaaatgcaaagattgataaaagtggtaggcctat-aaacttgtgcttgcaccttatttattttttcattgactca 199  Q
    |||||||| | |||||| | || ||| | | ||  ||  ||| |||||||| ||||| | ||||||||||     | |||||| |||| ||||| ||||     
T  16793328 tcttggttttaaagagcaaagttctgcagtacagcgaccgattaaagtggttggcctctaaaacttgtgc-----ctttatttgttttctcattaactcg 16793234  T
Q  200 taaaagttgagtgctgatacatagtaaattcaatgaatctgata 243  Q
    ||||||||||||| |||||| ||||||||||  ||||| |||||    
T  16793233 taaaagttgagtgttgatacgtagtaaattctttgaatttgata 16793190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 430 - 483
Target Start/End: Original strand, 15110398 - 15110451
Alignment:
Q  430 tgatttgttcccacaggatggaaaatgcctcgcagctttgttgcaaccaccttt 483  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  15110398 tgatatgtgcccacaggatggaaaatgcatcgcagctttgttgcaaccaccttt 15110451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 491
Target Start/End: Complemental strand, 3574213 - 3574151
Alignment:
Q  429 atgatttgttcccacaggatggaaaatgcctcgcagctttgttgcaaccacctttgctactcc 491  Q
    ||||||||||||||||||||||||||||  ||||  ||||| | |||||||||||| ||||||    
T  3574213 atgatttgttcccacaggatggaaaatgtgtcgcgtctttgatccaaccacctttgatactcc 3574151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 16629199 - 16629120
Alignment:
Q  269 cctgaagcactaagtgcagcagttggtgacattgaaaaggttgtccgtttgaatgaagaaataccaacctttattagtcc 348  Q
    |||||||||||  |||||||| | ||||| || ||| ||||||| ||||||||||| ||||| | | |||||||||||||    
T  16629199 cctgaagcactgcgtgcagcattcggtgatatagaagaggttgttcgtttgaatgatgaaatgcaaccctttattagtcc 16629120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 16629507 - 16629428
Alignment:
Q  269 cctgaagcactaagtgcagcagttggtgacattgaaaaggttgtccgtttgaatgaagaaataccaacctttattagtcc 348  Q
    |||||||||||  |||||||| | || || || ||| ||||||| ||||||||||| ||||||| | |||||||||||||    
T  16629507 cctgaagcactgcgtgcagcattcggcgatatagaagaggttgttcgtttgaatgatgaaatacaaccctttattagtcc 16629428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 16638080 - 16638001
Alignment:
Q  269 cctgaagcactaagtgcagcagttggtgacattgaaaaggttgtccgtttgaatgaagaaataccaacctttattagtcc 348  Q
    |||||||||||  |||||||| | ||||| || ||| ||||||| ||||||||||| ||||| | | |||||||||||||    
T  16638080 cctgaagcactgcgtgcagcattcggtgatatagaagaggttgttcgtttgaatgatgaaatgcaaccctttattagtcc 16638001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 16638388 - 16638309
Alignment:
Q  269 cctgaagcactaagtgcagcagttggtgacattgaaaaggttgtccgtttgaatgaagaaataccaacctttattagtcc 348  Q
    |||||||||||  |||||||| | || || || ||| ||||||| ||||||||||| ||||||| | |||||||||||||    
T  16638388 cctgaagcactgcgtgcagcattcggcgatatagaagaggttgttcgtttgaatgatgaaatacaaccctttattagtcc 16638309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 38877856 - 38877741
Alignment:
Q  366 cactgaagtgtttcaattacatttgatattgctgcattttcatcagcaagattatgacttgcaatgatttgttcccacaggatggaaaatgcctcgcagc 465  Q
    |||| |||||||| | |||||||||| |||| ||||| ||||||||||||||| ||||||| ||||||||  |||||||| |||||||||||||| ||||    
T  38877856 cactaaagtgtttaatttacatttgacattgatgcatgttcatcagcaagattctgacttgtaatgatttactcccacagcatggaaaatgcctcacagc 38877757  T
Q  466 tttgttgcaaccacct 481  Q
    ||||||||||||||||    
T  38877756 tttgttgcaaccacct 38877741  T

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Target: chr4; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 44 - 330
Target Start/End: Complemental strand, 38878232 - 38877946
Alignment:
Q  44 gatttcacccttgaaagaagaaagcaataatcaaaatcaagattctcagaaacctactcttggttctgaagagctatgtcctgaaatgcaaagattgata 143  Q
    ||||||||||||||   |||||| |||||| |||||||||| |||||| || |||||||| ||||||||||||| |  ||||| ||| ||  || || |     
T  38878232 gatttcacccttgattaaagaaaacaataaccaaaatcaagtttctcaaaagcctactctcggttctgaagagcaaaatcctgcaattcagcgaatgctt 38878133  T
Q  144 aaagtggtaggcctat-aaacttgtgcttgcaccttatttattttttcattgactcataaaagttgagtgctgatacatagtaaattcaatgaatctgat 242  Q
    || ||||||||||||| |||||||||   |  | |||||| ||||||| ||||||  ||| || |||||||||||||||||||||||| |||||||| |     
T  38878132 aacgtggtaggcctataaaacttgtgtcagatctttatttgttttttccttgacttgtaagagatgagtgctgatacatagtaaattctatgaatct-aa 38878034  T
Q  243 annnnnnncagataacatctatgtcgcctgaagcactaagtgcagcagttggtgacattgaaaaggttgtccgtttgaatgaagaaat 330  Q
    |       ||| | ||||| || |||||||||||||| |||  || ||||||||  ||| || |||| |||||||||||||| |||||    
T  38878033 attattttcagctgacatccatttcgcctgaagcactgagtcaaggagttggtggtattaaagaggtggtccgtttgaatgatgaaat 38877946  T

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