View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11571_low_25 (Length: 413)
Name: NF11571_low_25
Description: NF11571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11571_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 384; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 6 - 397
Target Start/End: Complemental strand, 3464202 - 3463811
Alignment:
| Q |
6 |
agcaaaggagaagaatgcttatcgctggttatgatcttgatatgtcatatatcacagatagagtattagcaatgtcatttcctgctgaacgtatgagagc |
105 |
Q |
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| T |
3464202 |
agcaaaggagaagaattcttatcgctggttatgatcttgatatgtcatatatcacagatagagtattagcaatgtcatttcctgctgaacgtatgagagc |
3464103 |
T |
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| Q |
106 |
aatgtatagaaatcctctctggcaagtcaaatctgtgttggatatgagacatcttgaacattataaggtatgcaagtttgaatcaaccagcatgtaaatt |
205 |
Q |
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| T |
3464102 |
aatgtatagaaatcctctctggcaagtcaaatctgtgttggatatgagacatcttgaacattataaggtatgcaagtttgaatcaaccagcatgtaaatt |
3464003 |
T |
|
| Q |
206 |
tcatagtactagcatctaacatacccttaataatccgactatggaccagtactcgaaaattgtttgaaaatctaaccacgacagacaaacattgtctttt |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
3464002 |
tcatagtactagcatctaacatacccttaataatccgactatggaccagtactcgaaaattgttcgaaaatctaaccacgacagacaaacattgtctttt |
3463903 |
T |
|
| Q |
306 |
gagattagaagtggatgacacaattattgattgaagcataccacttttgaaattttcaggtctataatctgtgtatagaagaacattatgat |
397 |
Q |
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| T |
3463902 |
gagattagaagtggatgacacaattattgattgaagcataccacttttgaaattttcaggtctataatctgtgtatagaagaacattatgat |
3463811 |
T |
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