View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11571_low_33 (Length: 357)
Name: NF11571_low_33
Description: NF11571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11571_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 22 - 342
Target Start/End: Original strand, 31446038 - 31446357
Alignment:
| Q |
22 |
tttccccttaaaaattactctattcctggaagaccgaagatcccacacacatgaatgcaataaatcgtgctgtagaaaatgtgaaacaggctcgacatta |
121 |
Q |
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| T |
31446038 |
tttccccttaaaaattactctattcctggaagaccgaagatcccacacacatgaatgcaataaatcgtgctgtagaaaatgtgaaacaggctcgatatta |
31446137 |
T |
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| Q |
122 |
caaatctcattcaaaggaccggatatacaattattagaaatgtatatctattatctatgtttccgtaaacttaatttaattgataggatattgcatgaaa |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| |||||| |
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| T |
31446138 |
caaatctcattcaaaggaccggatatacaattattagaaatgtatatctattatctatgtctccgtaaacttaatttaattgacagaatattgtatgaaa |
31446237 |
T |
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| Q |
222 |
tatgcatgagtcgggttcaaacctcaaaagctttacatattcactttnnnnnnngtgacatgaatatctatcatttacaccctaaaagtgtaagttggtc |
321 |
Q |
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|||||||||||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
31446238 |
tatgcatgagtcgggttcgaacctcaaacactttaattattcacttt-aaaaaagtgaaatgaatatctatcatttacaccctaaaagtgtaagttggtc |
31446336 |
T |
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| Q |
322 |
gaatgatttcgtttgtagacc |
342 |
Q |
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||||||||||||||||||||| |
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| T |
31446337 |
gaatgatttcgtttgtagacc |
31446357 |
T |
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