View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11571_low_50 (Length: 291)
Name: NF11571_low_50
Description: NF11571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11571_low_50 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 6 - 283
Target Start/End: Original strand, 41081149 - 41081422
Alignment:
| Q |
6 |
actaattataaataaataaaattcaatctacgggtttgagtcgagtggaagaagtaaactcttgcactatgacaaattaagggttttctgtaaagtactg |
105 |
Q |
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| T |
41081149 |
actaattataaataaataaaattcaatctacgggtttgagtcgagtggaagaagtaaactcttgcactatgacaaattaagggttttctgtaaagtactg |
41081248 |
T |
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| Q |
106 |
atttttaacaaattaaatgtatattaaagttaaaaaatttaattgagagagttgctagctatattaatgttcaactaagattgcattaattgatgcaaaa |
205 |
Q |
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| T |
41081249 |
atttttaacaaattaaatgtatattaaagttaaaaaatttaattgagagagtt----gctatattaatgttcaactaagattgcattaattgatgcaaaa |
41081344 |
T |
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| Q |
206 |
gagaaagggagaaaaactcaatttacacgtcctttcaataatacgatgcaacatggtgtttgatgatttcttcttctc |
283 |
Q |
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| T |
41081345 |
gagaaagggaaaaaaactcaatttacacgtcctttcaataatacgatgcaacatggtgtttgatgatttcttcttctc |
41081422 |
T |
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