View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11571_low_59 (Length: 254)

Name: NF11571_low_59
Description: NF11571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11571_low_59
NF11571_low_59
[»] chr2 (62 HSPs)
chr2 (1-241)||(35491715-35491955)
chr2 (1-241)||(41498980-41499220)
chr2 (1-241)||(19471520-19471760)
chr2 (1-237)||(6976916-6977152)
chr2 (1-247)||(37312375-37312621)
chr2 (1-241)||(27130395-27130635)
chr2 (1-238)||(2919254-2919491)
chr2 (1-241)||(10364523-10364763)
chr2 (1-241)||(34521570-34521810)
chr2 (1-241)||(40677261-40677501)
chr2 (1-203)||(29067809-29068008)
chr2 (1-203)||(3936991-3937190)
chr2 (1-241)||(33404095-33404331)
chr2 (1-203)||(43982936-43983135)
chr2 (71-241)||(43491600-43491770)
chr2 (1-203)||(22001914-22002113)
chr2 (1-204)||(29111238-29111438)
chr2 (1-203)||(17424869-17425068)
chr2 (1-204)||(17796033-17796230)
chr2 (2-206)||(42241021-42241224)
chr2 (1-131)||(3941817-3941947)
chr2 (1-131)||(5420549-5420679)
chr2 (1-131)||(10360195-10360325)
chr2 (2-131)||(42120093-42120222)
chr2 (3-131)||(39393973-39394101)
chr2 (2-131)||(12968298-12968427)
chr2 (2-131)||(22493352-22493481)
chr2 (1-134)||(6902046-6902179)
chr2 (5-131)||(16581906-16582034)
chr2 (2-123)||(29906663-29906784)
chr2 (2-134)||(20148199-20148331)
chr2 (2-131)||(32734728-32734857)
chr2 (1-74)||(39799895-39799968)
chr2 (2-63)||(18392118-18392179)
chr2 (69-204)||(16253603-16253735)
chr2 (27-141)||(27650413-27650527)
chr2 (3-49)||(34639047-34639093)
chr2 (27-171)||(31991896-31992036)
chr2 (58-131)||(18393486-18393559)
chr2 (159-207)||(2918962-2919010)
chr2 (156-241)||(10364302-10364389)
chr2 (156-241)||(35492088-35492175)
chr2 (156-241)||(43491904-43491991)
chr2 (159-205)||(6977402-6977448)
chr2 (27-141)||(15891633-15891747)
chr2 (69-171)||(18036122-18036220)
chr2 (159-207)||(34521338-34521386)
chr2 (161-204)||(17538543-17538586)
chr2 (156-241)||(19471299-19471386)
chr2 (156-207)||(41498686-41498737)
chr2 (156-241)||(41498759-41498846)
chr2 (159-201)||(35492200-35492242)
chr2 (159-207)||(19471221-19471269)
chr2 (160-242)||(37312164-37312248)
chr2 (163-207)||(43492020-43492064)
chr2 (156-223)||(10359778-10359845)
chr2 (156-241)||(40677040-40677127)
chr2 (156-203)||(18393842-18393891)
chr2 (159-204)||(40676970-40677015)
chr2 (159-207)||(10364229-10364277)
chr2 (24-76)||(17112399-17112451)
chr2 (159-207)||(37312087-37312135)
[»] chr4 (83 HSPs)
chr4 (1-241)||(957346-957586)
chr4 (1-241)||(22436987-22437227)
chr4 (1-241)||(49791827-49792067)
chr4 (1-241)||(34153177-34153417)
chr4 (4-243)||(21169530-21169769)
chr4 (1-237)||(2773085-2773321)
chr4 (1-241)||(36776410-36776650)
chr4 (1-241)||(44560071-44560311)
chr4 (1-241)||(47657246-47657486)
chr4 (1-243)||(6282212-6282454)
chr4 (3-241)||(34529687-34529925)
chr4 (1-241)||(49423648-49423889)
chr4 (1-243)||(43889388-43889630)
chr4 (1-223)||(49817553-49817775)
chr4 (1-240)||(4785314-4785553)
chr4 (1-203)||(21017109-21017308)
chr4 (1-204)||(32937833-32938033)
chr4 (1-203)||(55796819-55797018)
chr4 (1-203)||(6177247-6177446)
chr4 (1-203)||(40353705-40353904)
chr4 (1-203)||(56138986-56139185)
chr4 (1-203)||(41794494-41794693)
chr4 (2-131)||(14330695-14330824)
chr4 (2-206)||(27759404-27759607)
chr4 (2-131)||(1226236-1226365)
chr4 (1-203)||(17211342-17211542)
chr4 (1-134)||(20778867-20779000)
chr4 (2-131)||(21711607-21711736)
chr4 (1-203)||(49094821-49095020)
chr4 (1-131)||(1042825-1042955)
chr4 (2-131)||(242417-242546)
chr4 (1-196)||(24606828-24607020)
chr4 (2-131)||(49064056-49064185)
chr4 (1-131)||(51428193-51428323)
chr4 (1-198)||(11288371-11288563)
chr4 (3-131)||(39589007-39589135)
chr4 (3-207)||(42886344-42886548)
chr4 (1-139)||(26591678-26591816)
chr4 (2-207)||(18412672-18412874)
chr4 (2-131)||(33163545-33163674)
chr4 (1-131)||(25762674-25762804)
chr4 (1-131)||(51027768-51027898)
chr4 (2-131)||(31824630-31824759)
chr4 (5-131)||(37866486-37866613)
chr4 (1-131)||(20901669-20901799)
chr4 (1-131)||(28082314-28082444)
chr4 (1-141)||(3393380-3393520)
chr4 (3-131)||(9489757-9489884)
chr4 (2-131)||(46816526-46816653)
chr4 (1-140)||(10312348-10312487)
chr4 (1-131)||(45939601-45939731)
chr4 (3-169)||(13866341-13866503)
chr4 (3-141)||(13850827-13850965)
chr4 (13-197)||(31324262-31324444)
chr4 (129-204)||(49064563-49064638)
chr4 (159-241)||(49571559-49571643)
chr4 (156-241)||(22437361-22437448)
chr4 (46-141)||(49817188-49817283)
chr4 (156-236)||(49423427-49423509)
chr4 (156-235)||(26591585-26591666)
chr4 (121-205)||(14330242-14330326)
chr4 (69-141)||(17292106-17292178)
chr4 (159-207)||(49791533-49791581)
chr4 (160-207)||(36776116-36776163)
chr4 (156-241)||(49791606-49791693)
chr4 (165-223)||(42886847-42886905)
chr4 (159-205)||(49571671-49571717)
chr4 (156-209)||(34529391-34529444)
chr4 (159-207)||(957052-957100)
chr4 (159-207)||(2773571-2773619)
chr4 (159-203)||(44559887-44559931)
chr4 (27-171)||(23124490-23124630)
chr4 (156-203)||(49423358-49423405)
chr4 (156-241)||(24607284-24607369)
chr4 (159-207)||(242034-242082)
chr4 (118-223)||(4784952-4785059)
chr4 (156-241)||(2773459-2773546)
chr4 (159-204)||(34152885-34152931)
chr4 (158-241)||(34152958-34153043)
chr4 (159-204)||(51427792-51427837)
chr4 (159-207)||(21170013-21170060)
chr4 (159-241)||(34529469-34529553)
chr4 (159-223)||(43889082-43889146)
[»] chr3 (101 HSPs)
chr3 (1-241)||(46414223-46414463)
chr3 (1-241)||(55206773-55207013)
chr3 (1-225)||(41577996-41578220)
chr3 (1-241)||(51013167-51013407)
chr3 (1-241)||(43570000-43570240)
chr3 (1-241)||(52569298-52569537)
chr3 (1-240)||(41803992-41804231)
chr3 (1-243)||(2428577-2428819)
chr3 (1-241)||(34471965-34472205)
chr3 (10-241)||(46346501-46346732)
chr3 (1-239)||(51015367-51015605)
chr3 (1-241)||(7246184-7246424)
chr3 (2-241)||(45100354-45100593)
chr3 (1-240)||(42323279-42323518)
chr3 (1-241)||(14631535-14631775)
chr3 (1-241)||(34647156-34647396)
chr3 (1-241)||(30192628-30192868)
chr3 (2-243)||(49273490-49273731)
chr3 (3-241)||(7954296-7954534)
chr3 (2-204)||(37281543-37281745)
chr3 (1-203)||(2268424-2268623)
chr3 (1-204)||(36721315-36721518)
chr3 (1-203)||(50997478-50997677)
chr3 (1-169)||(10053236-10053400)
chr3 (1-169)||(50458652-50458820)
chr3 (1-203)||(4004017-4004216)
chr3 (1-203)||(34049817-34050016)
chr3 (1-203)||(36135097-36135296)
chr3 (1-203)||(49139984-49140183)
chr3 (1-203)||(54390532-54390731)
chr3 (1-203)||(2646806-2647005)
chr3 (1-203)||(3494959-3495158)
chr3 (1-203)||(46403093-46403292)
chr3 (1-131)||(44927553-44927683)
chr3 (3-131)||(34693289-34693417)
chr3 (5-131)||(13895869-13895995)
chr3 (1-142)||(47759879-47760020)
chr3 (1-131)||(19453228-19453358)
chr3 (2-131)||(42382362-42382491)
chr3 (2-131)||(42383142-42383271)
chr3 (1-241)||(8633254-8633488)
chr3 (3-131)||(49610581-49610709)
chr3 (1-131)||(24702271-24702401)
chr3 (2-131)||(39416947-39417076)
chr3 (2-130)||(25576592-25576719)
chr3 (2-130)||(48087552-48087680)
chr3 (3-131)||(51695605-51695733)
chr3 (1-204)||(6754294-6754495)
chr3 (6-131)||(42950019-42950144)
chr3 (1-130)||(43477147-43477276)
chr3 (1-241)||(33449044-33449268)
chr3 (1-141)||(774327-774467)
chr3 (2-206)||(44835412-44835615)
chr3 (2-131)||(47065778-47065907)
chr3 (3-131)||(49218735-49218863)
chr3 (2-206)||(53826621-53826824)
chr3 (2-203)||(6464274-6464473)
chr3 (1-141)||(27187038-27187178)
chr3 (139-237)||(55268753-55268851)
chr3 (2-207)||(20375808-20376010)
chr3 (41-206)||(18440875-18441037)
chr3 (41-206)||(19485949-19486111)
chr3 (118-216)||(37282039-37282137)
chr3 (118-223)||(36720916-36721021)
chr3 (156-243)||(27187558-27187645)
chr3 (13-134)||(14265507-14265628)
chr3 (159-207)||(43570486-43570534)
chr3 (159-207)||(45100070-45100118)
chr3 (156-241)||(7246558-7246645)
chr3 (158-205)||(14632020-14632067)
chr3 (156-241)||(41804366-41804453)
chr3 (159-216)||(51015853-51015910)
chr3 (159-207)||(10052981-10053029)
chr3 (159-207)||(34471671-34471719)
chr3 (159-207)||(46346207-46346255)
chr3 (159-207)||(46413916-46413964)
chr3 (159-207)||(52569004-52569052)
chr3 (141-216)||(39416536-39416611)
chr3 (156-241)||(41578369-41578456)
chr3 (159-198)||(49273979-49274018)
chr3 (118-207)||(34646810-34646900)
chr3 (159-207)||(2429063-2429111)
chr3 (159-207)||(7246670-7246718)
chr3 (46-130)||(7954774-7954858)
chr3 (23-171)||(25887571-25887717)
chr3 (159-207)||(41578481-41578529)
chr3 (159-207)||(42322985-42323033)
chr3 (159-241)||(42323061-42323145)
chr3 (159-241)||(43570374-43570458)
chr3 (159-241)||(46346283-46346367)
chr3 (159-207)||(51012882-51012930)
chr3 (156-241)||(2428951-2429038)
chr3 (156-241)||(8633033-8633120)
chr3 (156-241)||(34471744-34471831)
chr3 (156-241)||(34646935-34647022)
chr3 (190-241)||(50458597-50458648)
chr3 (156-241)||(52569077-52569164)
chr3 (162-207)||(55206479-55206524)
chr3 (27-119)||(17267306-17267398)
chr3 (159-207)||(19452742-19452790)
chr3 (159-241)||(51015741-51015825)
[»] chr8 (41 HSPs)
chr8 (1-241)||(41856862-41857102)
chr8 (1-241)||(42603540-42603777)
chr8 (1-241)||(40702446-40702687)
chr8 (1-238)||(44942972-44943209)
chr8 (1-241)||(18440183-18440423)
chr8 (2-241)||(19242050-19242289)
chr8 (2-241)||(19315234-19315473)
chr8 (1-203)||(15032253-15032452)
chr8 (89-241)||(26486847-26486999)
chr8 (1-203)||(485187-485386)
chr8 (2-131)||(40414697-40414826)
chr8 (2-131)||(43693224-43693353)
chr8 (3-131)||(26452413-26452541)
chr8 (1-206)||(42168884-42169088)
chr8 (1-131)||(38033923-38034053)
chr8 (2-131)||(33799549-33799678)
chr8 (2-131)||(40415344-40415473)
chr8 (3-131)||(41275482-41275610)
chr8 (1-131)||(2417001-2417131)
chr8 (1-131)||(41363742-41363872)
chr8 (2-131)||(43638675-43638804)
chr8 (2-171)||(3589228-3589393)
chr8 (3-131)||(24861431-24861559)
chr8 (1-131)||(34615039-34615169)
chr8 (2-131)||(28706140-28706269)
chr8 (34-203)||(31171744-31171911)
chr8 (1-94)||(26484663-26484756)
chr8 (101-204)||(16575866-16575966)
chr8 (65-131)||(22549232-22549295)
chr8 (159-207)||(41856566-41856614)
chr8 (159-209)||(2417541-2417591)
chr8 (156-240)||(40702822-40702908)
chr8 (159-207)||(40702933-40702981)
chr8 (1-60)||(16575778-16575837)
chr8 (156-241)||(28167298-28167385)
chr8 (156-241)||(41856639-41856726)
chr8 (141-223)||(33799332-33799414)
chr8 (159-204)||(42604023-42604068)
chr8 (159-203)||(18439893-18439937)
chr8 (160-192)||(28167412-28167444)
chr8 (156-224)||(28705721-28705789)
[»] chr7 (55 HSPs)
chr7 (1-241)||(48315069-48315309)
chr7 (6-241)||(21187188-21187423)
chr7 (1-241)||(30354704-30354944)
chr7 (1-241)||(41048861-41049101)
chr7 (1-238)||(46862086-46862323)
chr7 (1-241)||(43350989-43351228)
chr7 (1-240)||(36393714-36393953)
chr7 (1-241)||(42735340-42735580)
chr7 (1-223)||(48270726-48270948)
chr7 (3-231)||(15337804-15338032)
chr7 (1-241)||(28114282-28114522)
chr7 (1-240)||(21650602-21650840)
chr7 (1-204)||(21614689-21614889)
chr7 (1-203)||(20564837-20565036)
chr7 (7-203)||(9367050-9367243)
chr7 (3-131)||(34140945-34141073)
chr7 (1-131)||(17839401-17839532)
chr7 (2-131)||(18237643-18237772)
chr7 (2-131)||(39477239-39477368)
chr7 (1-204)||(1642518-1642716)
chr7 (1-123)||(17183290-17183412)
chr7 (1-203)||(10523146-10523346)
chr7 (3-131)||(30360597-30360724)
chr7 (2-130)||(47268977-47269105)
chr7 (15-131)||(2206036-2206152)
chr7 (1-131)||(40588627-40588757)
chr7 (2-131)||(41217693-41217822)
chr7 (2-131)||(48220743-48220870)
chr7 (1-171)||(2356367-2356534)
chr7 (2-223)||(20378613-20378831)
chr7 (36-203)||(13920419-13920583)
chr7 (5-92)||(28979060-28979147)
chr7 (6-131)||(45363251-45363367)
chr7 (59-200)||(17320134-17320272)
chr7 (5-70)||(26603265-26603330)
chr7 (69-131)||(26601777-26601839)
chr7 (27-134)||(28066359-28066466)
chr7 (69-141)||(11824839-11824911)
chr7 (159-207)||(36393420-36393468)
chr7 (155-241)||(20877941-20878027)
chr7 (89-131)||(34139332-34139374)
chr7 (156-235)||(21186967-21187048)
chr7 (159-207)||(21186894-21186942)
chr7 (156-241)||(48271100-48271187)
chr7 (71-141)||(18149675-18149745)
chr7 (159-209)||(46861787-46861837)
chr7 (156-205)||(21651111-21651160)
chr7 (77-141)||(3380663-3380727)
chr7 (159-241)||(46861865-46861949)
chr7 (156-207)||(21614383-21614434)
chr7 (156-241)||(30354483-30354570)
chr7 (159-205)||(10224631-10224677)
chr7 (159-209)||(20877645-20877695)
chr7 (159-207)||(28113988-28114036)
chr7 (159-241)||(28114064-28114148)
[»] chr1 (83 HSPs)
chr1 (1-241)||(49926270-49926510)
chr1 (1-241)||(13973000-13973240)
chr1 (1-241)||(38046324-38046564)
chr1 (1-243)||(14173646-14173888)
chr1 (1-241)||(36909637-36909877)
chr1 (1-241)||(49396780-49397020)
chr1 (1-240)||(6435848-6436087)
chr1 (4-241)||(37778158-37778395)
chr1 (1-237)||(23342717-23342953)
chr1 (1-225)||(35185046-35185271)
chr1 (1-241)||(41780769-41781009)
chr1 (1-241)||(24270255-24270493)
chr1 (3-241)||(35586822-35587057)
chr1 (1-241)||(17686251-17686491)
chr1 (41-241)||(40533176-40533376)
chr1 (2-204)||(18170102-18170304)
chr1 (1-241)||(13283781-13284017)
chr1 (4-204)||(17697125-17697322)
chr1 (1-131)||(35576415-35576545)
chr1 (1-204)||(21484573-21484773)
chr1 (1-241)||(17372803-17373040)
chr1 (1-203)||(19160393-19160592)
chr1 (1-131)||(49427463-49427593)
chr1 (1-223)||(39856817-39857036)
chr1 (3-131)||(51269880-51270008)
chr1 (1-131)||(12791273-12791403)
chr1 (1-131)||(45689195-45689325)
chr1 (1-237)||(35526091-35526307)
chr1 (1-131)||(13635297-13635427)
chr1 (1-131)||(48215274-48215404)
chr1 (6-131)||(39224197-39224322)
chr1 (3-131)||(27486690-27486818)
chr1 (2-130)||(42571777-42571905)
chr1 (3-131)||(44337319-44337447)
chr1 (2-198)||(24363737-24363929)
chr1 (1-131)||(29436049-29436179)
chr1 (1-134)||(3658549-3658682)
chr1 (2-131)||(46180280-46180409)
chr1 (1-131)||(29762221-29762351)
chr1 (1-131)||(44597777-44597907)
chr1 (1-207)||(18842515-18842735)
chr1 (2-131)||(47488037-47488166)
chr1 (2-131)||(50068259-50068388)
chr1 (9-131)||(48568404-48568526)
chr1 (6-131)||(27035318-27035443)
chr1 (1-171)||(5765282-5765448)
chr1 (3-131)||(41874884-41875012)
chr1 (2-131)||(30309832-30309955)
chr1 (6-131)||(49262988-49263113)
chr1 (53-128)||(29707544-29707619)
chr1 (1-141)||(16532080-16532220)
chr1 (11-85)||(49598921-49598995)
chr1 (1-171)||(16081361-16081527)
chr1 (156-203)||(22527735-22527782)
chr1 (159-207)||(6436334-6436382)
chr1 (159-207)||(35185545-35185593)
chr1 (159-207)||(35586515-35586563)
chr1 (156-241)||(13973374-13973461)
chr1 (156-207)||(13973483-13973534)
chr1 (136-198)||(18170606-18170668)
chr1 (141-223)||(47487619-47487701)
chr1 (159-205)||(49397206-49397252)
chr1 (159-207)||(24269961-24270009)
chr1 (159-207)||(38044788-38044836)
chr1 (159-207)||(42571372-42571420)
chr1 (1-56)||(13148395-13148450)
chr1 (27-122)||(19262422-19262517)
chr1 (156-207)||(40532882-40532933)
chr1 (136-198)||(18170765-18170827)
chr1 (159-204)||(23343202-23343247)
chr1 (159-207)||(12790869-12790917)
chr1 (159-207)||(14173354-14173402)
chr1 (159-207)||(35525793-35525841)
chr1 (156-241)||(14173427-14173514)
chr1 (156-241)||(24270034-24270121)
chr1 (156-241)||(37778529-37778616)
chr1 (71-141)||(14772522-14772592)
chr1 (159-205)||(36910122-36910168)
chr1 (156-241)||(49926050-49926136)
chr1 (159-223)||(17685939-17686002)
chr1 (170-241)||(41781143-41781215)
chr1 (156-207)||(41781225-41781277)
chr1 (159-207)||(49925977-49926025)
[»] chr6 (35 HSPs)
chr6 (1-241)||(13402613-13402853)
chr6 (1-241)||(12396856-12397096)
chr6 (1-241)||(32027517-32027757)
chr6 (2-241)||(30257468-30257707)
chr6 (1-241)||(32037576-32037816)
chr6 (1-240)||(34802786-34803025)
chr6 (83-241)||(35021126-35021284)
chr6 (2-206)||(801246-801447)
chr6 (1-203)||(6205564-6205763)
chr6 (1-203)||(27640260-27640459)
chr6 (1-203)||(11692531-11692730)
chr6 (2-206)||(14115118-14115318)
chr6 (3-131)||(29108222-29108350)
chr6 (3-131)||(29066635-29066763)
chr6 (3-131)||(29075648-29075776)
chr6 (3-131)||(29110620-29110748)
chr6 (2-131)||(35058734-35058863)
chr6 (59-203)||(24021027-24021168)
chr6 (1-105)||(22305876-22305980)
chr6 (59-199)||(2192535-2192672)
chr6 (53-131)||(3765786-3765865)
chr6 (137-241)||(4495119-4495223)
chr6 (118-203)||(30257127-30257212)
chr6 (137-241)||(30257228-30257334)
chr6 (156-235)||(12397236-12397317)
chr6 (156-241)||(13403269-13403356)
chr6 (156-241)||(35020905-35020992)
chr6 (69-134)||(17465331-17465396)
chr6 (159-207)||(32027223-32027271)
chr6 (159-207)||(32037282-32037330)
chr6 (71-171)||(34134801-34134897)
chr6 (156-241)||(32027296-32027383)
chr6 (156-241)||(32037355-32037442)
chr6 (27-130)||(28051473-28051577)
chr6 (159-207)||(35020832-35020880)
[»] chr5 (54 HSPs)
chr5 (1-241)||(4723966-4724206)
chr5 (1-241)||(1400194-1400434)
chr5 (11-241)||(35565356-35565586)
chr5 (1-241)||(1694864-1695104)
chr5 (1-241)||(18308335-18308575)
chr5 (1-203)||(7162-7361)
chr5 (1-203)||(27661310-27661509)
chr5 (1-203)||(28881066-28881265)
chr5 (1-168)||(6793351-6793518)
chr5 (1-203)||(8576074-8576273)
chr5 (1-203)||(19036607-19036806)
chr5 (2-131)||(11346785-11346914)
chr5 (1-131)||(8538029-8538159)
chr5 (1-131)||(3601416-3601546)
chr5 (1-131)||(11027852-11027982)
chr5 (1-131)||(19400438-19400568)
chr5 (1-131)||(30709673-30709803)
chr5 (2-168)||(36350279-36350436)
chr5 (1-134)||(33370729-33370862)
chr5 (1-131)||(541637-541767)
chr5 (1-131)||(1971440-1971570)
chr5 (1-131)||(38854233-38854363)
chr5 (2-131)||(40009604-40009733)
chr5 (1-100)||(35927470-35927569)
chr5 (39-131)||(7082334-7082426)
chr5 (1-131)||(17366738-17366868)
chr5 (59-203)||(22283704-22283845)
chr5 (1-83)||(3169678-3169760)
chr5 (118-207)||(7082792-7082881)
chr5 (69-141)||(17195351-17195423)
chr5 (136-207)||(1171725-1171796)
chr5 (27-171)||(18920835-18920975)
chr5 (72-134)||(12742818-12742880)
chr5 (156-207)||(4723672-4723723)
chr5 (141-207)||(33371169-33371235)
chr5 (159-207)||(25498643-25498691)
chr5 (159-207)||(34683523-34683571)
chr5 (159-207)||(35565832-35565880)
chr5 (72-134)||(12805636-12805698)
chr5 (159-207)||(6793074-6793122)
chr5 (76-131)||(3458940-3458995)
chr5 (27-171)||(25360549-25360690)
chr5 (159-241)||(25498456-25498539)
chr5 (156-241)||(36349996-36350083)
chr5 (20-86)||(2599313-2599379)
chr5 (156-241)||(1399976-1400060)
chr5 (159-207)||(1399903-1399951)
chr5 (156-203)||(18308817-18308864)
chr5 (27-171)||(36311911-36312051)
chr5 (159-209)||(20196639-20196689)
chr5 (142-203)||(10398006-10398067)
chr5 (163-207)||(11347272-11347316)
chr5 (156-235)||(18308715-18308795)
chr5 (156-206)||(40011844-40011896)
[»] scaffold0176 (1 HSPs)
scaffold0176 (3-131)||(1870-1998)
[»] scaffold0589 (1 HSPs)
scaffold0589 (1-131)||(2345-2475)
[»] scaffold0192 (1 HSPs)
scaffold0192 (2-131)||(17916-18045)
[»] scaffold0031 (1 HSPs)
scaffold0031 (59-203)||(85462-85603)
[»] scaffold0004 (2 HSPs)
scaffold0004 (72-204)||(64098-64227)
scaffold0004 (2-39)||(64054-64091)
[»] scaffold0268 (1 HSPs)
scaffold0268 (59-203)||(14604-14745)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-134)||(24983-25115)


Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 35491715 - 35491955
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  35491715 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 35491814  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  35491815 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 35491914  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  35491915 aacggcaggtctccaatattcgaccggcattcccattgttc 35491955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 41499220 - 41498980
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  41499220 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgagggtgacgttgctgagatcaactgaagatatcatcaa 41499121  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  41499120 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgaggtaattcaaacttgcca 41499021  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||| || |||||||||||||||||| ||||||||||||||    
T  41499020 aacgacaggtctccaatattcgaccgacattcccattgttc 41498980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 19471760 - 19471520
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  19471760 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtgtatcgatatgcgggtgacgttgctaagatcaactgaagatatcatcaa 19471661  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||  ||||||||||||||||||    
T  19471660 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctctgaattgggtaattcaaacttgtca 19471561  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    || |||| | ||||||||||||||| |||||||||||||||    
T  19471560 aatggcagggctccaatattcgaccagcattcccattgttc 19471520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 6976916 - 6977152
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  6976916 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 6977015  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||| ||    
T  6977016 aagtttgattccgcgagaagatcgtcattaggtaccgaatgaatgcaccttccagctacaacaattgtcttcctctgaatggggtaattcaaacttgcca 6977115  T
Q  201 aacggcatgtctccaatattcgaccggcattcccatt 237  Q
    ||||||| | ||||||| |||||| ||||||||||||    
T  6977116 aacggcaggactccaatgttcgactggcattcccatt 6977152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 37312621 - 37312375
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  37312621 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 37312522  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||| |||||| ||||||||||||||| ||    
T  37312521 aagtttgattctgccagaagatcgtcattaggtaccgaatgaatgcaccttacagctacaacaattgacttcctatgaatggggtaattcaaacttgcca 37312422  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttcatctca 247  Q
    ||||||||| || |||| |||||||| |||||||||||||| |||||    
T  37312421 aacggcatgactacaatgttcgaccgacattcccattgttcctctca 37312375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 27130635 - 27130395
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  27130635 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 27130536  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||| ||||||||||| ||| ||    
T  27130535 aagtttgattccgccagaagatagtcattaggtaccgaatgaatgcaccttccagctaaaacaattgtcttcctttgaatggggtaattcaaatttgcca 27130436  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    || | |||| ||||||| |||||||||||||||||||||||    
T  27130435 aatgacatgactccaatgttcgaccggcattcccattgttc 27130395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 2919491 - 2919254
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||| |||||||||| ||    
T  2919491 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttacagtagatcgatatgcgggtgacgttgctgagatcaactgaagatatcattaa 2919392  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  2919391 aagtttgattccgccaaaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaatgtggtaattcaaacttgcca 2919292  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattg 238  Q
    |||| |||| ||||||| ||  |||| ||||| |||||    
T  2919291 aacgacatgactccaatgtttaaccgacattctcattg 2919254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 10364763 - 10364523
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||    
T  10364763 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgatgttgctgagatcaattgaagatatcatcaa 10364664  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  10364663 aagtttgattccgccagaagatcgtcattacgta-ggaatgaatgcaccttccagctacaacaattgtcttcctttaaatggggtaattcaaacttgcca 10364565  T
Q  201 aac-ggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||| |||| |||||||||||||||||||||||| ||||||||    
T  10364564 aacgggcaggtctccaatattcgaccggcattctcattgttc 10364523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 34521810 - 34521570
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  34521810 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgttgagatcaactgaagatatcatcaa 34521711  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||  || |||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  34521710 aagtttgattccctcataagatcgtcattaggtaccgaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 34521611  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||| | | |||||||||||||  ||||||||||||||||    
T  34521610 aacggtaggactccaatattcgattggcattcccattgttc 34521570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 40677501 - 40677261
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  40677501 cgaacgacgaaaacgtgacgagcatgttctgggagcacgacatgttctagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 40677402  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||||||||||| ||||||||||||||| ||    
T  40677401 aagtttgattccgctagaagatcgtcattaggtacggaatgaatgcaccttgcagctacaccaattgtattcctttgaatggggtaattcaaacttgcca 40677302  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | ||||||| |||||||| ||||||||||||||    
T  40677301 aacggcaggactccaatgttcgaccgacattcccattgttc 40677261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 29067809 - 29068008
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  29067809 cgaatgacgaaaatgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 29067908  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||| || || | |  ||||  ||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29067909 aagtttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgtca 29068005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 3937190 - 3936991
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  3937190 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 3937091  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | ||||||||||||| |||||||||||| ||||||||||||||||||    
T  3937090 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtattcctttgaatgaggtaattcaaacttgtca 3936994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 33404095 - 33404331
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  33404095 cgaacgacgaaaacgtgacgagcatgttttgggagcacaagatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatattatcaa 33404194  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     ||| ||||  |||||||||||||| |||||||| |    |||||||||||  | |||||||||||||||||||||||||| |||||||||||||| | |    
T  33404195 cagtctgatgtcgccagaagatcgtgattaggtagg----gaatgcaccttccaactacaacaattgtcttcctttgaatgaggtaattcaaacttttta 33404290  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | ||| || ||| | |||||||| | |||||||    
T  33404291 aacggcaggactcaaacatttgtccggcatttctattgttc 33404331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 43982936 - 43983135
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  43982936 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 43983035  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | ||||||||||||| |||||||||||| ||||||||||||||||||    
T  43983036 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtattcctttgaatgaggtaattcaaacttgtca 43983132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 71 - 241
Target Start/End: Original strand, 43491600 - 43491770
Alignment:
Q  71 gttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtct 170  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||| ||    
T  43491600 gttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaaagaatgcaccttccaactacaacaattgcct 43491699  T
Q  171 tcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||| ||||||||||||||| |||||||||  ||||||||||| |||||| ||||||| |||||    
T  43491700 tcctttgaatggggtaattcaaacttgccaaacggcagatctccaatatttgaccggaattcccactgttc 43491770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22001914 - 22002113
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22001914 cgaacgacgaaaacgtgacgaccatgttttgggagctcagcatgttccaatggatcgatatgcgggtgaagttgcttagatcaacttaagatatcatcaa 22002013  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||| |||||||| ||  | | |  ||||  ||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  22002014 aagtttgattccgccagaagattgtcattagttattgtaag-ttgca--ttccaactacaacaattgtcttcctttgaatgaggtaattcaaacttgtca 22002110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 29111238 - 29111438
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||||    
T  29111238 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaaccgaagatatcatcaa 29111337  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    || ||| |||||||||||| | ||||| |||||| || |  | ||||  ||  | ||||||||||| |||||||||||||||||||||||||||||||||    
T  29111338 aaatttaattccgccagaataacgtcactaggtagggta-aagtgca--ttccaactacaacaattatcttcctttgaatgtggtaattcaaacttgtca 29111434  T
Q  201 aacg 204  Q
    ||||    
T  29111435 aacg 29111438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 17424869 - 17425068
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  17424869 cgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttctagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 17424968  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| ||||||||||||||||| ||||||||||||||||||    
T  17424969 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtcttcctttgaatgaggtaattcaaacttgtca 17425065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 17796230 - 17796033
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||| ||||||||||||||||||||   ||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  17796230 cgaacgacgaaaacgtgaagagcatgttttgggagcaca---tgttctagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaa 17796134  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||| ||||| |||||| ||||||||||||| |||   ||||   |||  | |||||||||||||||||||||||||| ||||||||||||||| ||    
T  17796133 aagtttggttccgtcagaagctcgtcattaggtaggga---aatgtgtcttccaactacaacaattgtcttcctttgaatgaggtaattcaaacttgcca 17796037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 42241224 - 42241021
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  42241224 gaacaacgaaaacgtgacgagcatgttttgggagcacaacatgtttcagttgatcgatatgcgggtgacgttgctgagatcaactgaagatatcaccaaa 42241125  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt-cctttg-aatgtggtaattcaaacttgtc 199  Q
    |||||||||| |||| |||||||||||||| || || | |  ||||  ||  | |||||||||||||||| ||| || |||| |||||||||||||||||    
T  42241124 agtttgattctgccataagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttacctctgaaatgaggtaattcaaacttgtc 42241028  T
Q  200 aaacggc 206  Q
    |||||||    
T  42241027 aaacggc 42241021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 3941817 - 3941947
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  3941817 cgaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgatgagatcaactgaagatatcatcaa 3941916  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||||||||||||||||||||||||    
T  3941917 caacttgattccgccagaagatcgtcattag 3941947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 5420549 - 5420679
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  5420549 cgaacgacgaaaacgtgacgaacatgttttgtgagcacagcatgttccaatggatcgatatgcgggtgacgttgctgatatcaactgaagatatcatcaa 5420648  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||| || |||||||||||||||    
T  5420649 aagtttgattccacctgaagatcgtcattag 5420679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10360325 - 10360195
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||| ||||| |||||||    
T  10360325 cgaacgatgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaatgttgctgagatcaactgaagatttcatcaa 10360226  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     || |||||||||||||||||||||||||||    
T  10360225 cagcttgattccgccagaagatcgtcattag 10360195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 42120093 - 42120222
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||| |||| |||||||||||||||||| |||||||||||||     
T  42120093 gaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggattgatatgtgggtaacgttgctgagatcaactgaagatatcatcaac 42120192  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||||||||||||||||||||||    
T  42120193 agcttgattccgccagaagatcgtcattag 42120222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 39393973 - 39394101
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| || |    
T  39393973 aacgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcattaaca 39394072  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      ||||||||| |||||||||||||||||    
T  39394073 acttgattccgtcagaagatcgtcattag 39394101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 12968427 - 12968298
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  12968427 gaacgacgaaaacgttacgagcatgttttgggagcacaacatgttccattggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaac 12968328  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||| ||||||||||||||||||    
T  12968327 aacttgattcctccagaagatcgtcattag 12968298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 22493352 - 22493481
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||| ||||| |||||||||||| |||||||||||||     
T  22493352 gaacggcgaaaacgtgacgagcatgttttgggagtacagaatgttccagtggattgatatgcgggtaacgttcctgagatcaactaaagatatcatcaac 22493451  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||||||||||||||||||||||    
T  22493452 aacttgattccgccagaagatcgtcattag 22493481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 6902046 - 6902179
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| || |||||| ||||||||||| ||||||| |||||    
T  6902046 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtgaatcgatatgcgagtaacgttgttgagatcaactgaagatattatcaa 6902145  T
Q  101 aagtttgattccgccagaagatcgtcattaggta 134  Q
     ||| ||||||||| |||||||| | ||||||||    
T  6902146 cagtctgattccgcgagaagatcatgattaggta 6902179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 16581906 - 16582034
Alignment:
Q  5 cgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcga--tatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| | ||||||  |||||||||||||||||||||||||||| |||||||||||||||    
T  16581906 cgacgaaaatgtgtcgagcatgttttgggagcacatcatgttccattggatcgagatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaa 16582005  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
    | |||||||||| |||||||| |||||||    
T  16582006 gcttgattccgctagaagatcttcattag 16582034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 29906663 - 29906784
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| || ||||||||||     
T  29906663 gaacgacgaaaacgtgacaaacatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaaaatatcatcaac 29906762  T
Q  102 agtttgattccgccagaagatc 123  Q
    |  ||||||| |||||||||||    
T  29906763 aacttgattctgccagaagatc 29906784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 20148199 - 20148331
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||| |||| |||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||| | || |||||||  ||||     
T  20148199 gaacgacgaaaacatgactagcatgttttaggagcacaacatgttccagtagatcgatatgcgggtaacgttgctgagattagctgaagatattttcaac 20148298  T
Q  102 agtttgattccgccagaagatcgtcattaggta 134  Q
    ||| |||||||||||||||||||| ||||||||    
T  20148299 agtctgattccgccagaagatcgtgattaggta 20148331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 32734728 - 32734857
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||| ||||||| ||||| ||||||||||||||||||| |||||| |||| ||||||||||||||| |||||| ||| ||||||| |||||||||||||     
T  32734728 gaactacgaaaatgtgacaagcatgttttgggagcacaacatgttacagtggatcgatatgcgggtaacgttgttgatatcaactgaagatatcatcaac 32734827  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||||||| ||||| ||||||||    
T  32734828 agcttgattccgccaaaagatagtcattag 32734857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39799968 - 39799895
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttg 74  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  39799968 cgaacgacgaaaacgtcacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttg 39799895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 18392118 - 18392179
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgc 63  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18392118 gaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgc 18392179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 16253603 - 16253735
Alignment:
Q  69 acgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgt 168  Q
    |||||||||||||||||| ||||||| ||| | ||||||||||| |||||||||||| |||||||| |    |||| ||||||  | |||||||||||||    
T  16253603 acgttgctgagatcaactaaagatattatcgacagtttgattccaccagaagatcgtgattaggtagg----gaatacaccttccaactacaacaattgt 16253698  T
Q  169 cttcctttg-aatgtggtaattcaaacttgtcaaacg 204  Q
    ||| || || |||| |||||||||||||||| |||||    
T  16253699 cttactctgaaatgaggtaattcaaacttgttaaacg 16253735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 27650527 - 27650413
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtc 126  Q
    |||||| | |||| |||||| | || ||||||||||   || |||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||     
T  27650527 ttttggcaacacaacatgttaccgtggatcgatatgtttgtcacgttgctgagatcaactgaagatattctcaacagtttgattccgccagaagatcgtg 27650428  T
Q  127 attaggtacggaatg 141  Q
    |||||||| ||||||    
T  27650427 attaggtagggaatg 27650413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 34639047 - 34639093
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttcca 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34639047 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttcca 34639093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 31992036 - 31991896
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtc 126  Q
    |||||| |||| |||||| | | ||| |||||||||   || ||||||| |||||||||| |||||||  |||| | ||||||||||||||||||||||     
T  31992036 ttttggaagcatagcatggttccgtttatcgatatgtttgtcacgttgcagagatcaactgaagatattctcaacaatttgattccgccagaagatcgtg 31991937  T
Q  127 attaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
    |||||||| |    |||||||||||  | ||||||||||||||||    
T  31991936 attaggtagg----gaatgcaccttccaactacaacaattgtctt 31991896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 18393486 - 18393559
Alignment:
Q  58 atatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattag 131  Q
    ||||||| || |||||||||||||||||| |||||||||| || |  ||||||| |||||||||||||||||||    
T  18393486 atatgcgtgtaacgttgctgagatcaactgaagatatcataaacaacttgattctgccagaagatcgtcattag 18393559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 2919010 - 2918962
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  2919010 caacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 2918962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 10364302 - 10364389
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| |||||||||| || || |||||||||| ||| | ||||| |||||||||||||| |||||||||| |||||    
T  10364302 ctacaacaattgtcttacctttgaatggggaaaattcaaacttgccaagcagcatgactccaatattcgactggcattcccaatgttc 10364389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 35492175 - 35492088
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| | ||| | ||| ||||||||| ||||||||||| |||||    
T  35492175 ctacaacaattgtcttacctttgaatgtggtaaattcaaacttgccaagcagcaggactcaaatattcgatcggcattcccaatgttc 35492088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 43491991 - 43491904
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| |||||||||| ||| | ||| | ||||||||||||||||||||||||| |||||    
T  43491991 ctacaacaattgtgttacctttgaatggggtaaattcaaacttgccaagcagcaggactccaatattcgaccggcattcccaatgttc 43491904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 6977402 - 6977448
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacgg 205  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  6977402 caacaattgtcttcctttgaatggggtaattcaaacttgttaaacgg 6977448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 15891747 - 15891633
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtc 126  Q
    |||||| ||| ||||||| | | | |||||||||||   || ||||||| |||||||||| |||||||  |||| ||||||||||||| |||| |||||     
T  15891747 ttttggcagcgcagcatggttccggtgatcgatatgtttgtcacgttgcggagatcaactgaagatattctcaacagtttgattccgctagaatatcgtg 15891648  T
Q  127 attaggtacggaatg 141  Q
    |||||||| ||||||    
T  15891647 attaggtagggaatg 15891633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 18036220 - 18036122
Alignment:
Q  69 acgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgt 168  Q
    ||||||| |||||||||| || ||||  |||| | |||||||||||||||||||||| |||||||| |||   ||||||||||  | |||||||||||||    
T  18036220 acgttgcagagatcaactaaaaatattctcaacaatttgattccgccagaagatcgtgattaggta-gga---aatgcaccttccaactacaacaattgt 18036125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 34521386 - 34521338
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  34521386 caacaattgtcttcatttgaatggggtaattcaaacttgttaaacggca 34521338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 17538586 - 17538543
Alignment:
Q  161 acaattgtcttcctttgaatgtggtaattcaaacttgtcaaacg 204  Q
    ||||||||||||||||||||| |||||||||||||||| |||||    
T  17538586 acaattgtcttcctttgaatggggtaattcaaacttgttaaacg 17538543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 19471299 - 19471386
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| |||||||||| ||| | ||| | ||||||||||||||||||||| ||| |||||    
T  19471299 ctacaacaattgtgttacctttgaatggggtaaattcaaacttgccaagcagcaggactccaatattcgaccggcatttccaatgttc 19471386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 41498737 - 41498686
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||| |||||| || ||||||||||||| ||||||||    
T  41498737 ctacaacaattgtcttcctctgaatggggcaattcaaacttgttaaacggca 41498686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 41498759 - 41498846
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| | ||| |||||||||||||| | ||| | ||||||||||||||| ||||||||| |||||    
T  41498759 ctacaacaattgtgttacctttgaatgggataaattcaaacttgtcaagcagcaagactccaatattcgaccagcattcccaatgttc 41498846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 35492200 - 35492242
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  35492200 caacaattgtcttcctctgaatttggtaattcaaacttgtcaa 35492242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 19471269 - 19471221
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| ||||||  ||||||||||||||| ||||||||    
T  19471269 caacaattgtcttcctctgaatggagtaattcaaacttgttaaacggca 19471221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 37312164 - 37312248
Alignment:
Q  160 aacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttca 242  Q
    ||||||||| || |||||||||| ||||| ||||||||| |||| | ||||| ||||||| |||||||| ||||||||| |||||    
T  37312164 aacaattgtgttacctttgaatggggtaaattcaaacttttcaagcagcatgactccaatgttcgaccgacattcccatagttca 37312248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 43492020 - 43492064
Alignment:
Q  163 aattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||    
T  43492020 aattgtctttctttgaatgaggtaattcaaacttgttaaacggca 43492064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 10359845 - 10359778
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcga 223  Q
    |||||||||||||||| || || ||| || ||||||||||||| || ||||||| |||||| ||||||    
T  10359845 ctacaacaattgtcttactctggatggggcaattcaaacttgttaatcggcatgactccaacattcga 10359778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 40677040 - 40677127
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || || ||||||||||||| |||||||||| ||| | ||| | ||||||||| |||||| |||||||| |||||    
T  40677040 ctacaacaattgtgttacccttgaatgtggtaaattcaaacttgccaagcagcaagactccaatatacgaccgacattcccaatgttc 40677127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 18393891 - 18393842
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaac 203  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  18393891 ctacaacaattgtcttacctttgaatggggtaaattcaaacttgtcaaac 18393842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 40677015 - 40676970
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacg 204  Q
    |||||||||||||| |||||||| |||||||| ||||||| |||||    
T  40677015 caacaattgtcttcatttgaatgaggtaattccaacttgttaaacg 40676970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 10364277 - 10364229
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||| || | |||| |||||||||||||||| ||||||||    
T  10364277 caacaattgtctttctctaaatggggtaattcaaacttgttaaacggca 10364229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 17112399 - 17112451
Alignment:
Q  24 atgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgct 76  Q
    ||||||||||||||||  |||||| | | ||| ||||||||||||||||||||    
T  17112399 atgttttgggagcacaatatgttctaatggattgatatgcgggtgacgttgct 17112451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 37312135 - 37312087
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||| ||||| | |||| |||||||||||||||| ||||||||    
T  37312135 caacaattgttttcctctaaatggggtaattcaaacttgttaaacggca 37312087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 957586 - 957346
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  957586 cgaacgacgaaaacgtgacgagcatgttttaggagcacagcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaa 957487  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||| ||||||| ||    
T  957486 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattgaaacttgcca 957387  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  957386 aacggcaggtctccaatattcgaccggcattcccattgttc 957346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 22436987 - 22437227
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  22436987 cgaacgatgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 22437086  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| ||    
T  22437087 aagtttgattccgccggaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttccttcaaatggggtaattcaaacttgcca 22437186  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  22437187 aacggcaggtctccaatattcgaccggcattcccattgttc 22437227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 49792067 - 49791827
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  49792067 cgaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcaggtaacgttgctgagatcaactgaagatatcatcaa 49791968  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     |  |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  49791967 caacttgattccgccaaaagatcatcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttaaatggggtaattcaaacttgtca 49791868  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  49791867 aacggcaggtctccaatattcgaccggcattcccattgttc 49791827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 34153417 - 34153177
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||| |||||||| ||||||||||| |||||||||||||    
T  34153417 cgaacgacgaaaacgtgacgatcatgttttgggagcacaacatgttccagtggatcaatatgcggatgacgttggtgagatcaactgaagatatcatcaa 34153318  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||| ||||||||||||||| ||    
T  34153317 aagtttgattctgccagaagatcgtcattatgtacggaatgaatgcaccttccagctacaacagttgtcttcctttgaatggggtaattcaaacttgcca 34153218  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  34153217 aacggcatgtctccaatattcgaccgacattcccattgttc 34153177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 21169530 - 21169769
Alignment:
Q  4 acgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaag 103  Q
    |||| ||| ||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||     
T  21169530 acgatgaatacgcgacgagcatgttttgggagcacagcatgtaccagtggatcgatatgcaggtgacgttgctgagatcaactgaagatatcatcaaaaa 21169629  T
Q  104 tttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  21169630 tttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccaactacaacaattgtcttcctttgaatggggtaattcaaacttgccaaac 21169729  T
Q  204 ggcatgtctccaatattcgaccggcattcccattgttcat 243  Q
    |||| | |||||||||||||||||||||||||||||||||    
T  21169730 ggcaggactccaatattcgaccggcattcccattgttcat 21169769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 2773085 - 2773321
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||||  ||||||||||| |||||| ||||||    
T  2773085 cgaacgacgaaaacgtgacgaacatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttattgagatcaactgaagataccatcaa 2773184  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     |  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2773185 caacttgattccgccagaagatcgtcatcaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatggggtaattcaaacttgtca 2773284  T
Q  201 aacggcatgtctccaatattcgaccggcattcccatt 237  Q
    |||||||  ||||||||||||||||||||||||||||    
T  2773285 aacggcagttctccaatattcgaccggcattcccatt 2773321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 36776650 - 36776410
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  36776650 cgaacgacgaaaacgtgacgagcatggtttgggagcacggcatgttccagtggatcgatatgcgggtgacgttgttgagatcaactgaagatatcatcaa 36776551  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||   |||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  36776550 aagtttgattccgctgaaagatcgtcattaggtaccgaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 36776451  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||| ||||||| |||||||| ||||||||||||||    
T  36776450 aacggcatgactccaatgttcgaccgacattcccattgttc 36776410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 44560311 - 44560071
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||||||| |||||||||||||    
T  44560311 cgaacgacgaaaacgtgacaagcatgttttgggagcaaagcatgttccagtgtattgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 44560212  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||| | ||  ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  44560211 aagtttgatttctccttaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 44560112  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  44560111 aacggcaggtctccaatattcgaccgacattcccattgttc 44560071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 47657486 - 47657246
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  47657486 cgaacgaccaaaacgtgacgagcatattttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 47657387  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  47657386 aagtttgattccaccagaagatcgtcattaggtatcgaatgaatgcacattccagctacaacaattgtcttcctttgaatgaggtaattcaaacttgtca 47657287  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | ||||||| |||||||| ||||||||||||||    
T  47657286 aacggcaggactccaatgttcgaccgacattcccattgttc 47657246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 6282454 - 6282212
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  6282454 cgaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgctaagatcaactgaagatatcatcaa 6282355  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||    
T  6282354 aagtttgattctgccagaagatcgtcattagttacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatggggtaattcaagcttgcca 6282255  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttcat 243  Q
    ||||||| |||| ||||||||||| | ||||  ||||||||||    
T  6282254 aacggcaggtcttcaatattcgactgacattttcattgttcat 6282212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 3 - 241
Target Start/End: Complemental strand, 34529925 - 34529687
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  34529925 aacgacgaaaatgtgacgagcattttttgggagcacaacatgttccagtggatcgatatgcaggtgacgttgctgagatcaactgaagatatcatcaaaa 34529826  T
Q  103 gtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaa 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| |||||||||||| |||||||||||| || ||||    
T  34529825 gtttgattccgccagaagatcgtcattaggtacggaatgaatgcacattaaagctacaacaattgtattcctttgaatggggtaattcaaacatgccaaa 34529726  T
Q  203 cggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||| | ||||||||||||| | |||||||||||||||    
T  34529725 cggcaggactccaatattcgaacagcattcccattgttc 34529687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 49423889 - 49423648
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||| ||||||||    
T  49423889 cgaacgacgaaaacgtgacgagcatgttctgggagcacggcatgttcaagtggatcgatatgcgggtgacgttgctgagatcaactgaagaaatcatcaa 49423790  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt-cctttgaatgtggtaattcaaacttgtc 199  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||| || |||||||||| ||||||||||| |||||    
T  49423789 aagtttgattctgccataagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtgttacctttgaatggggtaattcaaatttgtc 49423690  T
Q  200 aaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||| | ||||||| |||||||| ||||||||||||||    
T  49423689 aaacggcaggactccaatcttcgaccgacattcccattgttc 49423648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 43889630 - 43889388
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  43889630 cgaacgacgaaaacgtgacgaacatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgttgagatcaactgaagatataatcaa 43889531  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||||| | |||| ||||||||||||||| ||    
T  43889530 aagtttgattccgccagaagatcgtcattaggtaccgaatgaatgcaccttccaactacaacaattgtcttcctctaaatggggtaattcaaacttgcca 43889431  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttcat 243  Q
    |||| || | ||||||| ||||| || ||||||||||||||||    
T  43889430 aacgacaggactccaatgttcgaacgacattcccattgttcat 43889388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 49817775 - 49817553
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  49817775 cgaacgacgaaaacgttacgagcatgttttgggagcacatcatgttctagtggatcgatatgcgggtaacgttgctgagatcaactgaagatattatcaa 49817676  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     ||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||| ||||||||||||||| ||    
T  49817675 cagtctgattccgccagaagatcgtcattaggtacggaatgaatgtacctttcaactacaacaattgtcttcatttgaatggggtaattcaaacttgcca 49817576  T
Q  201 aacggcatgtctccaatattcga 223  Q
    ||| ||| | ||||| |||||||    
T  49817575 aacagcaggactccagtattcga 49817553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 4785553 - 4785314
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||| ||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||  |||||||||| ||||||| ||||||| |||||    
T  4785553 cgaacgacaaaaacgtgaagaacatgttttgggagcacaacatgttccagtggatcgatatgcggggaacgttgctgatatcaactgaagatattatcaa 4785454  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     ||||||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||| |  ||| ||||||||||||||| ||    
T  4785453 cagtttgattccgccacaagatcgtcattaggtaccgaatgaatgcatctttcagctacaacaattgtgttcctctagatggggtaattcaaacttgcca 4785354  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgtt 240  Q
    ||||||| | |||||  || || ||| |||||||||||||    
T  4785353 aacggcaggactccagcatacgtccgacattcccattgtt 4785314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21017308 - 21017109
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  21017308 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 21017209  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  21017208 aagtttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatgaggtaattcaaacttgtca 21017112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 32938033 - 32937833
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  32938033 cgaacgacgaaaacgtgacgagcatgtttcgggagcacagcatgttccagtggatcgatatgcgggtaacgttgttgagatcaactgaagatatcatcaa 32937934  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    || |||||||||||||||||||||||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  32937933 aaatttgattccgccagaagatcgtcattagatagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatgaggtaattcaaacttgtca 32937837  T
Q  201 aacg 204  Q
    ||||    
T  32937836 aacg 32937833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 55796819 - 55797018
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  55796819 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 55796918  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| | ||||||||||||||||    
T  55796919 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatgggctaattcaaacttgtca 55797015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 6177446 - 6177247
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  6177446 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 6177347  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| |||| |||||||||||| ||||||||||||||||||    
T  6177346 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtattcctttgaatgaggtaattcaaacttgtca 6177250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 40353904 - 40353705
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  40353904 cgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 40353805  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||| |||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| |||||||||||| |||||    
T  40353804 aagtttgattccgccagaagattgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatggggtaattcaaacctgtca 40353708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 56138986 - 56139185
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  56138986 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 56139085  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| |||| |||||||||||| ||||||||||||||||||    
T  56139086 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtattcctttgaatgaggtaattcaaacttgtca 56139182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 41794693 - 41794494
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  41794693 cgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 41794594  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| |||| |||||||||||| ||||||||||||||||||    
T  41794593 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtattcctttgaatgaggtaattcaaacttgtca 41794497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 14330824 - 14330695
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  14330824 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccaatggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaaa 14330725  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||||||||||||    
T  14330724 agtttgattccgccagaagatcgtcattag 14330695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 27759404 - 27759607
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||| |||||||||||||     
T  27759404 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgagtaacgttgctgagatcaactgaagatatcatcaac 27759503  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt-cctttg-aatgtggtaattcaaacttgtc 199  Q
    || ||||||||||||||||||||||||||| || || | |  ||||  ||| | |||||||||||||||| ||| || |||| ||||||||||||||| |    
T  27759504 agcttgattccgccagaagatcgtcattagttagggtaag-gtgca--tttcaactacaacaattgtcttacctctgaaatggggtaattcaaacttgcc 27759600  T
Q  200 aaacggc 206  Q
    |||||||    
T  27759601 aaacggc 27759607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 1226236 - 1226365
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  1226236 gaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaaa 1226335  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||||||||||||    
T  1226336 agtttgattccgccagaagatcgtcattag 1226365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 17211342 - 17211542
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  17211342 cgaacgataaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaactaaagatattatcaa 17211441  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttg-aatgtggtaattcaaacttgtc 199  Q
     ||| |||||||||||||||||||| |||||||| |||   |||||| |||  | |||||||||||||||| || || |||| ||||||||||||||||     
T  17211442 cagtctgattccgccagaagatcgtgattaggtaggga---aatgcatcttccaactacaacaattgtcttactctgaaatgaggtaattcaaacttgtt 17211538  T
Q  200 aaac 203  Q
    ||||    
T  17211539 aaac 17211542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 20779000 - 20778867
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||  ||||||||||||||||| |||||||||||||    
T  20779000 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccaatggatcgatatgcgggtttcgttgctgagatcaactgaagatatcatcaa 20778901  T
Q  101 aagtttgattccgccagaagatcgtcattaggta 134  Q
    |||||||||||||||| |||||||||||||||||    
T  20778900 aagtttgattccgccaaaagatcgtcattaggta 20778867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 21711607 - 21711736
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||     
T  21711607 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaac 21711706  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||||||||||||||||||||||    
T  21711707 aacttgattccgccagaagatcgtcattag 21711736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 49094821 - 49095020
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||    
T  49094821 cgaacgacaaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcgtcaa 49094920  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| |||| |||||||||||| ||||||||||||||||||    
T  49094921 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtattcctttgaatgaggtaattcaaacttgtca 49095017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1042825 - 1042955
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  1042825 cgaacgacgaaaacgtgacgaacatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatataatcaa 1042924  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||||||||||||||||||||||||    
T  1042925 caacttgattccgccagaagatcgtcattag 1042955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 242546 - 242417
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  242546 gaacgatgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaac 242447  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||||||||||||||||||||||    
T  242446 agcttgattccgccagaagatcgtcattag 242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 24606828 - 24607020
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| || ||| |||||| |||| |||||||||||||||||| ||||||| |||||    
T  24606828 cgaacgacgaaaacgtgacgagcatgtattgggagcacatcatgttcccgtggattgatatgtgggtaacgttgctgagatcaactgaagatattatcaa 24606927  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaactt 196  Q
     ||| |||||||||||||||||||| |||||||| |   | |||| || ||  | |||||||||||||||||||||||||| ||||||||||||||    
T  24606928 gagtctgattccgccagaagatcgtgattaggtagg---taaatgtacattccaactacaacaattgtcttcctttgaatgaggtaattcaaactt 24607020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 49064056 - 49064185
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||||||||||||||||| |||||||| |||||| | || |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  49064056 gaacgacgaaaacgtgacgagcatgtttttggagcacaacatgtttccgtggatcgatatgcgggtgacgttgcttagatcaactgaagatatcatcaaa 49064155  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||||||||||||    
T  49064156 agtttgattccgccagaagatcgtcattag 49064185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 51428323 - 51428193
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  51428323 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgttgagatcaactgaagatatcatcaa 51428224  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     || |||||||||| ||||||||||||||||    
T  51428223 cagcttgattccgcaagaagatcgtcattag 51428193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 11288371 - 11288563
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| || |||||||||||||||||| ||||||| ||||     
T  11288371 cgaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgagtaacgttgctgagatcaactgaagatattatcac 11288470  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgt 198  Q
    || |||||||| |  |||||||||| |||| ||| |||||    |||||||  | |||| | ||||||||||||||||||| ||||||||||||||||    
T  11288471 aa-tttgattctgttagaagatcgtgattaagtagggaat----gcaccttccaactaccataattgtcttcctttgaatgaggtaattcaaacttgt 11288563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 39589007 - 39589135
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| |    
T  39589007 aacgacgaaaatgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcggatgacgttgctgagatcaactgaagatatcatcaaca 39589106  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      |||||||||| ||||||||||||||||    
T  39589107 acttgattccgctagaagatcgtcattag 39589135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 207
Target Start/End: Original strand, 42886344 - 42886548
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    |||||||||||| ||||||||||| |||| ||||||| ||| ||| ||| |||||||| |||||| |||||||||||||||||| ||||||| ||||| |    
T  42886344 aacgacgaaaacatgacgagcatgctttgagagcacaacattttctagtggatcgatacgcgggtaacgttgctgagatcaactgaagatattatcaaca 42886443  T
Q  103 gtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaa 202  Q
    || |||||||||||||||||| ||||||||||| || | |||| |||||  ||||||||||||||| ||||| || ||| ||||||| ||||||  ||||    
T  42886444 gtctgattccgccagaagatcatcattaggtaccgatttaatgtaccttccagctacaacaattgtattcctctggatggggtaatttaaacttaccaaa 42886543  T
Q  203 cggca 207  Q
    |||||    
T  42886544 cggca 42886548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 26591816 - 26591678
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||| |||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||    
T  26591816 cgaacgacaaaaacgtgacgaacatattttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctaagatcaactgaagatatcatcaa 26591717  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaa 139  Q
     |  |||||||||||||||||||||||||||||||||||    
T  26591716 caacttgattccgccagaagatcgtcattaggtacggaa 26591678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 18412672 - 18412874
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||| |||| |||||||||||| || |||||||||||||||||| || |||| |||||     
T  18412672 gaacgacgataacgtgaggagcatgttttgggagcacaccatgtttcagtggatcgatatgcgtgtaacgttgctgagatcaactgaatatattatcaac 18412771  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttg-aatgtggtaattcaaacttgtca 200  Q
    | |||||||| ||||||||||||| |||||||| |    |||||||||||  | |||||||||||||||| || || |||| |||||||||||||||| |    
T  18412772 aatttgattctgccagaagatcgtgattaggtagg----gaatgcaccttccaactacaacaattgtcttactctgaaatggggtaattcaaacttgtta 18412867  T
Q  201 aacggca 207  Q
    |||||||    
T  18412868 aacggca 18412874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 33163674 - 33163545
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| |||| |||||| ||||||||||| |||||||||||||     
T  33163674 gaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgtgggtaacgttgttgagatcaactgaagatatcatcaac 33163575  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||||||||||||||||||||||    
T  33163574 agcttgattccgccagaagatcgtcattag 33163545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 25762674 - 25762804
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||  || ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  25762674 cgaacgacgaaaacgtgacgaacatgttttgggagcacaacatgttctggtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaa 25762773  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||||||||||||||||||||||||    
T  25762774 caacttgattccgccagaagatcgtcattag 25762804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 51027898 - 51027768
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  51027898 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgttgagatcaactgaagatatcatcaa 51027799  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||||| ||| ||||||||||||||    
T  51027798 caacttgattccaccataagatcgtcattag 51027768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 31824759 - 31824630
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||| |||||||| ||||||||| |||||||||||||     
T  31824759 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcaatatgcgggtaacgttgcttagatcaactgaagatatcatcaac 31824660  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||||| ||||||||||||||||    
T  31824659 agcttgattccgctagaagatcgtcattag 31824630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 37866486 - 37866613
Alignment:
Q  5 cgacgaaaacgtgacgagcatgtttt-gggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaag 103  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |     
T  37866486 cgacgaaaacgtgatgagcatgttttcgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaatat 37866585  T
Q  104 tttgattccgccagaagatcgtcattag 131  Q
     |||||||||| ||||||||||||||||    
T  37866586 cttgattccgctagaagatcgtcattag 37866613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20901799 - 20901669
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||||| |||||||||||||    
T  20901799 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttctagtggatcgatatgcgggtaacactgctgagatcaactgaagatatcatcaa 20901700  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||||| || |||||||||||||||    
T  20901699 caacttgattccacctgaagatcgtcattag 20901669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 28082314 - 28082444
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| |||| |||| |||||| ||||| ||| || ||||||||| |||||||||||||    
T  28082314 cgaacgacgaaaacatgacgagcatgttttgggagcacatcatgtttcagtggatcaatatgcaggtgaagttacttagatcaactgaagatatcatcaa 28082413  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    || ||||||||||||||||||||||||||||    
T  28082414 aaatttgattccgccagaagatcgtcattag 28082444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3393380 - 3393520
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||  || |||||||||||||||||| ||||||| |||||    
T  3393380 cgaacgacgaaaacgtgaggagcatgttttgggagcacaacatgttctagtggatcgatatgcatgtaacgttgctgagatcaactgaagatattatcaa 3393479  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
     ||| |||||||||||||||||| | |||||||| ||||||    
T  3393480 cagtctgattccgccagaagatcatgattaggtagggaatg 3393520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 9489757 - 9489884
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||  ||||||||||| ||||||||||||| |    
T  9489757 aacgacgaaaatgtgacgagcatgttttgg-agcacagcatgttccagtggattgatatgcgggtgacgttattgagatcaactgaagatatcatcaaca 9489855  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      |||||||||||||||||||||||||||    
T  9489856 acttgattccgccagaagatcgtcattag 9489884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 46816653 - 46816526
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||| ||||||||  | |||||||||||||     
T  46816653 gaacgacaaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcaggtaacgttgttgagatca--tgaagatatcatcaat 46816556  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||||||||||||||||||||||    
T  46816555 agcttgattccgccagaagatcgtcattag 46816526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10312348 - 10312487
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| | ||||||||| ||||||| |||||    
T  10312348 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgttaagatcaactgaagatattatcaa 10312447  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaat 140  Q
     | | | |||||||  ||||||||| |||||||| |||||    
T  10312448 caatctaattccgctggaagatcgtgattaggtagggaat 10312487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 45939601 - 45939731
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||| || ||||||||||||||||||||||||| ||||||||||| |||||||||||| || |||||||||||||||||| |||||||||||||    
T  45939601 cgaacgacgataatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgagtaacgttgctgagatcaactgaagatatcatcaa 45939700  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||||  ||| ||||||||||||||    
T  45939701 caacttgattcttccataagatcgtcattag 45939731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 13866341 - 13866503
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||  ||||||||| ||||||||||||||||| |||||| | || ||| ||||||   || |||||||||||||||||| |||||||  |||| |    
T  13866341 aacgacgacgacgtgacgaacatgttttgggagcacaacatgttaccgtggattgatatgtatgtaacgttgctgagatcaactgaagatattctcaaca 13866440  T
Q  103 gtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtc 169  Q
    ||||||||||||||||||| ||| |||||||| |    |||||||||||| | ||||||||||||||    
T  13866441 gtttgattccgccagaagaccgtgattaggtagg----gaatgcacctttcaactacaacaattgtc 13866503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 13850827 - 13850965
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||  ||||||||| ||||||||||||||||| |||||| | || ||||||||||   || || ||||||||||||||| |||||||  |||| |    
T  13850827 aacgacgacgacgtgacgaacatgttttgggagcacaacatgttaccgtggatcgatatgtatgtaacattgctgagatcaactaaagatattctcaaca 13850926  T
Q  103 gtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
    ||||||||||||||||||| ||| |||||||| ||||||    
T  13850927 gtttgattccgccagaagaccgtgattaggtagggaatg 13850965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 31324262 - 31324444
Alignment:
Q  13 acgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattcc 112  Q
    |||||||||||||||||| |||||||| |||||| | || |||||||||| | || | |||||||||||||||| |||| ||  |||| |||||||||||    
T  31324262 acgtgacgagcatgtttttggagcacaacatgttaccgtggatcgatatgtgtgtaaagttgctgagatcaactgaagacattctcaacagtttgattcc 31324361  T
Q  113 gccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt-cctttg-aatgtggtaattcaaacttg 197  Q
    || |||||||| | |||||||| |    |||||||||||  | |||||||||||||||| |||||| |||| | |||||||||||||    
T  31324362 gctagaagatcatgattaggtagg----gaatgcaccttccaactacaacaattgtcttacctttgaaatgagataattcaaacttg 31324444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 49064563 - 49064638
Alignment:
Q  129 taggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacg 204  Q
    |||||||||||||||||||||||  | || ||||||||||||||||||||||| |||||||||||||||| |||||    
T  49064563 taggtacggaatgaatgcaccttccaactgcaacaattgtcttcctttgaatgaggtaattcaaacttgttaaacg 49064638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 49571643 - 49571559
Alignment:
Q  159 caacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| |||||||||| ||||| |||||||||| ||| | ||||| |||||||||||||||| ||||||||||||||    
T  49571643 caacaattgtcttacctttgaatgaggtaaattcaaacttgccaagcagcatgactccaatattcgaccgacattcccattgttc 49571559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 22437448 - 22437361
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| |||||||||| ||| | ||| | |||||||||||||||||||||||||||||||    
T  22437448 ctacaacaattgtgttacctttgaatggggtaaattcaaacttgccaagcagcaggactccaatattcgaccggcattcccattgttc 22437361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 49817283 - 49817188
Alignment:
Q  46 tccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
    |||||| |||||||||||| || |||||| ||||||||| | ||||||| ||||| ||| |||||| |||| |||||||| |||||||| ||||||    
T  49817283 tccagtggatcgatatgcgtgtaacgttgatgagatcaaatgaagatattatcaacagtctgattctgccaaaagatcgtgattaggtagggaatg 49817188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 49423427 - 49423509
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccat 236  Q
    ||||||||||||| || |||||||||||||||| |||||||||| ||||||||| | ||||||| |||||||| |||||||||    
T  49423427 ctacaacaattgtgttacctttgaatgtggtaaattcaaacttgccaaacggcacgactccaatgttcgaccgacattcccat 49423509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 26591585 - 26591666
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattccca 235  Q
    |||||||||||||||| |||||||||| ||||| |||||||||| ||| | ||| | |||||||||||||||||||||||||    
T  26591585 ctacaacaattgtcttacctttgaatggggtaaattcaaacttgccaagcagcaggactccaatattcgaccggcattccca 26591666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 14330326 - 14330242
Alignment:
Q  121 atcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacgg 205  Q
    ||||||| || ||||||||  ||||||||||  | ||  |||||||||||||||||||||| |||||||||||||||| ||||||    
T  14330326 atcgtcagtaagtacggaacaaatgcaccttccaactgtaacaattgtcttcctttgaatgaggtaattcaaacttgttaaacgg 14330242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 17292106 - 17292178
Alignment:
Q  69 acgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
    ||||||| |||||||||| |||||||  |||| |||||||||||||||||||||||| |||| ||| ||||||    
T  17292106 acgttgcagagatcaactgaagatattctcaacagtttgattccgccagaagatcgtgattatgtagggaatg 17292178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 49791581 - 49791533
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  49791581 caacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 49791533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 36776163 - 36776116
Alignment:
Q  160 aacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  36776163 aacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 36776116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 49791606 - 49791693
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||| ||| |||||||||| ||||| |||||||||| ||| | ||||| ||||||||||||| ||||||||||| |||||    
T  49791606 ctacaacaattggcttacctttgaatggggtaaattcaaacttgccaagcagcatgactccaatattcgatcggcattcccaatgttc 49791693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 42886847 - 42886905
Alignment:
Q  165 ttgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcga 223  Q
    ||||||||||||||||| |||||||||||||| | |||||||||| |||||| ||||||    
T  42886847 ttgtcttcctttgaatgaggtaattcaaacttattaaacggcatgactccaacattcga 42886905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 49571671 - 49571717
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacgg 205  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  49571671 caacaattgtcttcctttgaatgaggtaattcaaacttgttaaacgg 49571717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 34529444 - 34529391
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatg 209  Q
    ||||||||||||||||||| |||||| || ||||||||||||| ||||||||||    
T  34529444 ctacaacaattgtcttcctctgaatggggcaattcaaacttgttaaacggcatg 34529391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 957100 - 957052
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  957100 caacaattgtcatcctttgaatggggtaattcaaacttgttaaacggca 957052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 2773571 - 2773619
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  2773571 caacaattgtcttcctctgaatggggtaattcaaacttgttaaacggca 2773619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 44559931 - 44559887
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  44559931 caacaattgtcttcctttgaatggggtaattcaaacttgttaaac 44559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 23124630 - 23124490
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtc 126  Q
    |||||| |||||| |||||||  || ||||||||||   || ||||||||||||||   | |||||||  |||| | ||||||| ||||||||||| ||     
T  23124630 ttttggtagcacaacatgttctcgtggatcgatatgtttgtcacgttgctgagatcgcttaaagatattctcaacaatttgatttcgccagaagattgtg 23124531  T
Q  127 attaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
    |||||||| |    |||||||||||| | ||||||||||||||||    
T  23124530 attaggtagg----gaatgcacctttcaactacaacaattgtctt 23124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 49423405 - 49423358
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  49423405 ctacaacaattgtcttcctctgaatggggtaattcaaacttgttaaac 49423358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 24607284 - 24607369
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||| |||| || |||  ||||||||||||||| |||||||| | |||||| ||||| ||| |||| | |||||||    
T  24607284 ctacaacaattgtcctcctctggatggagtaattcaaacttgttaaacggcaggactccaacattcgtccgacatttctattgttc 24607369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 242082 - 242034
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||||||    
T  242082 caacaactgtcttcctttgaattgggtaattcaaacttgttaaacggca 242034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 4785059 - 4784952
Alignment:
Q  118 aagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttc--ctttgaatgtggtaattcaaacttgtcaaacggcatgtctcca 215  Q
    |||||| ||| |||||||| |||||||||| |||  |  | |||||||||||||   ||||||||| ||| |||||||||||| ||||| |||| |||||    
T  4785059 aagatcatcagtaggtacgaaatgaatgcatcttccaagtgcaacaattgtctttttctttgaatggggtgattcaaacttgttaaacgacatgactcca 4784960  T
Q  216 atattcga 223  Q
    | ||||||    
T  4784959 acattcga 4784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 2773546 - 2773459
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| |||||||||| ||||| || ||||||| ||| |  |||| ||||||||||||||| ||| ||||| |||||    
T  2773546 ctacaacaattgtcttacctttgaatgaggtaaatttaaacttgccaagcatcatgactccaatattcgaccagcactcccaatgttc 2773459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 34152931 - 34152885
Alignment:
Q  159 caacaattg-tcttcctttgaatgtggtaattcaaacttgtcaaacg 204  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||||    
T  34152931 caacaattgatcttcctttgaatggggtaattcaaacttgttaaacg 34152885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 34152958 - 34153043
Alignment:
Q  158 acaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||| |||||||||| ||||| |||||||||| ||| | ||| | ||||||||| | |||| |||||||| |||||    
T  34152958 acaacaattgtcttacctttgaatgaggtaaattcaaacttgccaagcagcaggactccaatatacaaccgacattcccaatgttc 34153043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 51427837 - 51427792
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacg 204  Q
    |||||||||||||||||| |||| ||||||||||| |||| |||||    
T  51427837 caacaattgtcttccttttaatggggtaattcaaatttgttaaacg 51427792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 21170013 - 21170060
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||| |||||||||||| |||||||||||||| | ||||||||    
T  21170013 caacaattgttttcctttgaatg-ggtaattcaaacttcttaaacggca 21170060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 34529469 - 34529553
Alignment:
Q  159 caacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||| || |||||||||| ||||| |||||||||| ||| | ||| | ||||||||||||| || |||||||| |||||    
T  34529469 caacaattgtgttacctttgaatgaggtaaattcaaacttgccaagcagcaggactccaatattcgatcgacattcccaatgttc 34529553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 43889146 - 43889082
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcga 223  Q
    |||||||| ||||||| |||||| |||||||||||| ||| ||||| ||||  ||||| ||||||    
T  43889146 caacaattttcttcctctgaatggggtaattcaaacatgttaaacgacatgaatccaacattcga 43889082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 101)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 46414463 - 46414223
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46414463 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 46414364  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||    
T  46414363 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttctagctacaacaattgtcttcctttgaatgtggtagttcaaacttgcca 46414264  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||| ||||||| |||||||| ||||||||||||||    
T  46414263 aacggcatgactccaatgttcgaccgacattcccattgttc 46414223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 55207013 - 55206773
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  55207013 cgaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 55206914  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  55206913 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatggggtaatacaaacttgtca 55206814  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| ||||| |||||||||||||||||| ||||||||    
T  55206813 aacggcaggtctctaatattcgaccggcattctcattgttc 55206773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 41577996 - 41578220
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  41577996 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcaatatgcgagtgacgttgctgagatcaactgaagatatcatcaa 41578095  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  41578096 aagtttgattccgccagaagatcatcattaggtacggaatgaatgcacctttcagctacaacaattgtcttcctttgaatgtggtaattcaaacttgcca 41578195  T
Q  201 aacggcatgtctccaatattcgacc 225  Q
    ||||||| |||||||||||||||||    
T  41578196 aacggcaggtctccaatattcgacc 41578220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 51013407 - 51013167
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  51013407 cgaacgacgaaaacgtgacgagcatgttttgggaacacaacatgttccagtgtatcgatatgcgggtgacgttgctaagatcaactgaagatatcatcaa 51013308  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  51013307 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 51013208  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  51013207 aacggcaggtctccaatattcgaccggcattcctattgttc 51013167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 43570000 - 43570240
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| | |||||||||||||    
T  43570000 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtaacgttgctgagatcaattgaagatatcatcaa 43570099  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  43570100 aagtttgatttcgccagaagatcgtctttatgtacggaatgactgcaccttccagctacaacaattgtcttcctttgaatgaggtaattcaaacttgcca 43570199  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  43570200 aacggcacgtctccaatattcgactggcattcccattgttc 43570240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 52569537 - 52569298
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  52569537 cgaacgacgaaaa-gtgacgagcatgttttgggagcacaacatgttccggtgaatcgatatgcgggtgacattgctgagatcaactgaagatatcatcaa 52569439  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  52569438 gagtttgattccgccagaagatcgtcattaggtgcggaatgaatgcaccttttagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 52569339  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  52569338 aacggcaggtctccaatattcgatcggcattcccattgttc 52569298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 41803992 - 41804231
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||||||||| ||||||||| | ||||||| |||||    
T  41803992 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgagagtgacgttgatgagatcaaatgaagatataatcaa 41804091  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  41804092 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcactttttagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 41804191  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgtt 240  Q
    ||||| | |||||||||||||||||| |||||||||||||    
T  41804192 aacggaaggtctccaatattcgaccgacattcccattgtt 41804231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 2428577 - 2428819
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  2428577 cgaacgacgaaaacgtgacgaacatgttttgggagcacaacattttctagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 2428676  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| ||    
T  2428677 aagtttgattccgctagaagatcgtcattaggtacataatgaatgcacctttcagctacaacaattgtgttcctttgaatggggtaattcaaacttgcca 2428776  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttcat 243  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  2428777 aacggcaggtctccaatattcgaccgacattcccattgttcat 2428819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 34472205 - 34471965
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  34472205 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 34472106  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||| |||||||||||||||||||||||||||| |||||||||  ||||  |||||||| ||||||||||||||||||| ||||||||||||||| ||    
T  34472105 aagttttattccgccagaagatcgtcattaggtaccgaatgaatgttccttccagctacaaaaattgtcttcctttgaatggggtaattcaaacttgcca 34472006  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||| ||||||| |||||||| ||||||||||||||    
T  34472005 aacggcatgactccaatgttcgaccgacattcccattgttc 34471965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 46346732 - 46346501
Alignment:
Q  10 aaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgat 109  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46346732 aaaacgtgacgagcatgttctgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgat 46346633  T
Q  110 tccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatg 209  Q
    ||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||| ||||||||| |    
T  46346632 tccgccagaagattgtcattatgtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaattgggtaattcaaacttgccaaacggcagg 46346533  T
Q  210 tctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||||||||||||| ||||||||    
T  46346532 tctccaatattcgaccggcattctcattgttc 46346501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 51015367 - 51015605
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||||||    
T  51015367 cgaacgacgaaaacgtgacgaacatgttttgggagcacaacatgttccagtggatcgatatgcgggaaacgttgctgagatcaactgaagatatcatcaa 51015466  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||| |||||||| |||||| ||    
T  51015467 aagtttgattccgccagaagatcgtcattaggtaccgaatgaatgcaccttccagctacaacaattgtctttctttgaatggggtaattcgaacttgcca 51015566  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgt 239  Q
    ||||||| | ||||||||||||||| |||||||||||||    
T  51015567 aacggcaggactccaatattcgacccgcattcccattgt 51015605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 7246184 - 7246424
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||  | | |||||||||||  ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  7246184 cgaacgacgaaaacgtgacgagcatgttttgggattataacatgttccagtgtatcgatatgcgggtgacgttgcttagatcaactgaagatatcatcaa 7246283  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||| |||||||||||||||||| ||||||||||||||| ||    
T  7246284 aagtttgattccgccagaagatcgtcattaggtatggaataaatgcaccttccagctacaacgattgtcttcctttgaatggggtaattcaaacttgcca 7246383  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    || |||| |||||||||||||||||||||||||||||||||    
T  7246384 aatggcaggtctccaatattcgaccggcattcccattgttc 7246424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 45100593 - 45100354
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45100593 gaacgacaaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaa 45100494  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    ||||||||||||||| || ||||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||| |||    
T  45100493 agtttgattccgccataatatcgtcattaggtactgaatgaatgcactttttagctactacaattgtctttctttgaatggggtaattcaaacttgccaa 45100394  T
Q  202 acggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||| |  |||||| |||||||| ||||||||||||||    
T  45100393 acggcaggaatccaatgttcgaccgacattcccattgttc 45100354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 42323518 - 42323279
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||| |||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  42323518 cgaacgacgaaaacgtgacgagcatgttttgggagctcaaaatgtttcagtggatcgatatgctggtgacgttgctgagatcaactgaagatatcatcaa 42323419  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||| |  ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||| ||    
T  42323418 aagtttgattccactggaagatcgtcattaggtactgaatgaatgcaccttccagctacaacaattgtcttcctctgaatggggtaattcaaacttggca 42323319  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgtt 240  Q
    |||| |||| ||||||| ||||||||||||||||||||||    
T  42323318 aacgacatgactccaatgttcgaccggcattcccattgtt 42323279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 14631535 - 14631775
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  14631535 cgaacaacgaaaacgtgacgagcatgttttgggagcaaaacatgttccagtggattgatatgcgggtgacgttgttgagatcaactaaagatatcatcaa 14631634  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| |  ||||||||||| |||||||||||||| | ||||||||||||||| ||    
T  14631635 aagtttgattctgccagaagatcgtcattaggtaccgaatgaatgcaccatccagctacaacaactgtcttcctttgaacggggtaattcaaacttgcca 14631734  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||| |||| ||||||| ||| |||||||||||||||||||    
T  14631735 aacgacatgactccaatgttctaccggcattcccattgttc 14631775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 34647396 - 34647156
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  34647396 cgaacgacgaaaacgtgacgagcatgtttcgggagcacaacatgttccagtggattgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 34647297  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||||| |    
T  34647296 aagtttgattacgctagaagatcgtcattaggtaccgaatgaatgcaccttctagctgcaacaattgtcttcctctgaatgtggtaattcgaacttgtta 34647197  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||  || | ||||||| |||||||| ||||| ||||||||    
T  34647196 aacaacacgactccaatgttcgaccgacattctcattgttc 34647156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 30192628 - 30192868
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  30192628 cgaacgacgaaaacgtgtctagcatgttttgggagtacatcatgttctagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 30192727  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| |||||||||||||| |||| |||||||||| ||    
T  30192728 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccaactacaacaattttcttcctttgaatgaggtatttcaaacttgcca 30192827  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |  ||||||||  ||||| ||||| ||||||||    
T  30192828 aacggcaggagtccaatatctgaccgacattctcattgttc 30192868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 49273490 - 49273731
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||    
T  49273490 gaacgacgaaaacgtgacgagcatgttctgggagcacaacatgttccagttgatcaatatgtgggtgacgttgctgagatcaactgaatatatcatcaaa 49273589  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    ||||||||||  |||||| ||||||||||||| | ||||||| |||||||  |||||| |||||||||||||||||||||||||||||||||| || ||     
T  49273590 agtttgattcttccagaatatcgtcattaggtcctgaatgaacgcaccttccagctaccacaattgtcttcctttgaatgtggtaattcaaacatgccat 49273689  T
Q  202 acggcatgtctccaatattcgaccggcattcccattgttcat 243  Q
    | |||||| ||||||| |||||| | ||||||||||||||||    
T  49273690 atggcatgactccaatgttcgactgacattcccattgttcat 49273731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 3 - 241
Target Start/End: Original strand, 7954296 - 7954534
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||| ||||||||| ||||||| ||||| |    
T  7954296 aacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaaagttgctaagatcaactgaagatattatcaaca 7954395  T
Q  103 gtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaa 202  Q
     | ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  7954396 atctgattccgctagaagatcgtcattaggtacggaatgaatgcaccttctaactacaacaattgtcttcctttgaatgaggtaattcaaacttgccaaa 7954495  T
Q  203 cggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||| | |||||| |||||| || |||| | |||||||    
T  7954496 cggcaagactccaacattcgatcgacatttctattgttc 7954534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 37281543 - 37281745
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  37281543 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgtttcagtggatcgatatgcgggtgacgttgctgagatcaacggaagatatcatcaaa 37281642  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||| ||||| || ||| |||||||||||||||||||    
T  37281643 agtttaattccgccagaagatcgtcattaggtaccgaatgaatgcaccttcaaactacaacaattgtgttcctatggatgaggtaattcaaacttgtcaa 37281742  T
Q  202 acg 204  Q
    |||    
T  37281743 acg 37281745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 2268623 - 2268424
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  2268623 cgaacgacgaaaacgtgacgggcatgttttgggagcacatcatgttccagtagatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 2268524  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  2268523 aagtttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatggggtaattcaaacttgtca 2268427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 36721518 - 36721315
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||   |||||||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  36721518 cgaacgacgaaaacgtgacgagcaatgtttgggagcacaacatgttctagtggatcgatatgctggtgacgttgctgagatcaactgaagatatcatcaa 36721419  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||  | ||||||||||||| ||||| || ||| ||||||||||||| | ||    
T  36721418 aagtttgattccgccagaagatcgtcatttggtatcgaatgaatgcaccttccacctacaacaattgtgttcctctggatgaggtaattcaaactagcca 36721319  T
Q  201 aacg 204  Q
    ||||    
T  36721318 aacg 36721315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 50997478 - 50997677
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  50997478 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagttgatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 50997577  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||| || || | |  ||||  ||  | ||||||||||||| ||| |||||||| ||||||||||||||||||    
T  50997578 aagtttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtattcttttgaatggggtaattcaaacttgtca 50997674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10053400 - 10053236
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||| ||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||    
T  10053400 cgaacgacgaaaacgtgatgagcatgttttgggagcaca---tgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaa-atatcatcaa 10053305  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtc 169  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  10053304 aagtttgattccgccagaagatcgtcattaggtactgaatgaatgcaccttccagctacaacaattgtc 10053236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 50458820 - 50458652
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||| |||| |||||||||||||    
T  50458820 cgaacgacgaaaacttgacgagcatgttttgggagcacaacatgttccagtggatagatatgcgggtgacgttgttgagataaactgaagatatcatcaa 50458721  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtc 169  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||||||||  ||||||||||||||||    
T  50458720 aagtttgattccgcctgaagatcgtcattaggtaccgaacgaatgcaccttccagctacaacaattgtc 50458652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 4004216 - 4004017
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  4004216 cgaacgacaaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 4004117  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||| ||||||||||||||||||| ||  || | || |  | ||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  4004116 aagtttgattctgccagaagatcgtcattagtta--gagt-aaggtgcattccaactacaacaattgtcttcctttgaatggggtaattcaaacttgtca 4004020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 34049817 - 34050016
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  34049817 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 34049916  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | ||||||||||||| |||||||||||| ||||||||||||||||||    
T  34049917 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtattcctttgaatgaggtaattcaaacttgtca 34050013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 36135097 - 36135296
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  36135097 cgaacgacgaaaacgtgacgagcatgttttgggagcacatcatgtttcagtagatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 36135196  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||| |||||||| ||  | | | |||||  ||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  36135197 aagtttgattccgccagaagattgtcattagttagagtaag-atgca--ttccaactacaacaattgtcttcctttgaatggggtaattcaaacttgtca 36135293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 49140183 - 49139984
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  49140183 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 49140084  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | ||||||||||||| |||||||||||| ||||||||||||||||||    
T  49140083 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtattcctttgaatgaggtaattcaaacttgtca 49139987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 54390532 - 54390731
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  54390532 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 54390631  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | ||||||||||||| |||||||||||| ||||||||||||||||||    
T  54390632 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtattcctttgaatgaggtaattcaaacttgtca 54390728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 2647005 - 2646806
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  2647005 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 2646906  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||| |||||||||||||||| || || | |  ||||  ||  | ||||||||||||||||| |||||||| |||||||||||| |||||    
T  2646905 aagtttgattccgctagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcatttgaatggggtaattcaaacctgtca 2646809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 3495158 - 3494959
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| | |||||||||||||||||||||||    
T  3495158 cgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgtttagatcaacttaagatatcatcaa 3495059  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||| ||||||||||||||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| |||||||||||||| |||    
T  3495058 aagtttgattctgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatggggtaattcaaacttttca 3494962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 46403093 - 46403292
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  46403093 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 46403192  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| |||| |||||||||||| ||||||||||||||||||    
T  46403193 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtattcctttgaatgaggtaattcaaacttgtca 46403289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 44927553 - 44927683
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  44927553 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgttgagatcaactgaagatatcatcaa 44927652  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||||||||||||    
T  44927653 aagtttgattccgccagaagatcgtcattag 44927683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 34693417 - 34693289
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34693417 aacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaa 34693318  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
     ||||||||||||||||||||||||||||    
T  34693317 ctttgattccgccagaagatcgtcattag 34693289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 13895995 - 13895869
Alignment:
Q  5 cgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  13895995 cgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagc 13895896  T
Q  105 ttgattccgccagaagatcgtcattag 131  Q
    |||||||||| ||||||||||||||||    
T  13895895 ttgattccgctagaagatcgtcattag 13895869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 47760020 - 47759879
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||| |||||||||||||    
T  47760020 cgaacgacgaaaacgtgacaaacatgttttgggaacacagcatgttccagtggatcgatgtacgggtgacgttgctgagatcaactaaagatatcatcaa 47759921  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatga 142  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  47759920 aagtttgattccgccagaagatcgtcattaggtaccgaatga 47759879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19453358 - 19453228
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  19453358 cgaacgacgaaaacgtgacgagcatgttatgggagcacaacatgttccaatggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaa 19453259  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||| |||||||||| |||||||    
T  19453258 aagtttgattccaccagaagatcatcattag 19453228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 42382362 - 42382491
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  42382362 gaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaac 42382461  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||||||||||||||||||||||    
T  42382462 aagttgattccgccagaagatcgtcattag 42382491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 42383142 - 42383271
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  42383142 gaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaac 42383241  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||||||||||||||||||||||    
T  42383242 aagttgattccgccagaagatcgtcattag 42383271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 8633488 - 8633254
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||  || ||||||||  ||| | ||||||||| ||||||||||||||| |||||| || ||||| || ||||||| |||||    
T  8633488 cgaacgacgaaaacgtgacgaatattttttgggatgacaacgtgttccagtggatcgatatgcgggtaacgttgttgcgatcatctgaagatattatcaa 8633389  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     ||| ||||||||||||||||||||||||||||||     |||||||||    | |||||||||||||||||||||||||| ||||||||||||||||||    
T  8633388 cagtctgattccgccagaagatcgtcattaggtac----cgaatgcacc--ccaactacaacaattgtcttcctttgaatgaggtaattcaaacttgtca 8633295  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | |||||  |||||| ||||||| | |||||||    
T  8633294 aacggcaggactccagcattcgatcggcatttctattgttc 8633254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 49610581 - 49610709
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||| |    
T  49610581 aacgacgaaaacgtgacgagcatgttttgggagcacagtatgttccagtgggtcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaca 49610680  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      |||||||||||||||||||||||||||    
T  49610681 acttgattccgccagaagatcgtcattag 49610709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 24702401 - 24702271
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  24702401 cgaacgacgaaaacgtgacggacatgttttgggagcacaacatgttccagtggatcgatatgcaggtgacgttgttgagatcaactgaagatatcatcaa 24702302  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    ||| |||||||||||||||||||||||||||    
T  24702301 aagcttgattccgccagaagatcgtcattag 24702271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 39417076 - 39416947
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  39417076 gaacgacgaaaacgtgatgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaat 39416977  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||| ||||||||||||||||||||    
T  39416976 agcttgatttcgccagaagatcgtcattag 39416947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 25576719 - 25576592
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  25576719 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttcca-tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaat 25576621  T
Q  102 agtttgattccgccagaagatcgtcatta 130  Q
    || ||||||||| ||||||||||||||||    
T  25576620 agcttgattccgtcagaagatcgtcatta 25576592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 48087680 - 48087552
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  48087680 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatattccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaac 48087581  T
Q  102 agtttgattccgccagaagatcgtcatta 130  Q
    || |||||||| |||||||||||||||||    
T  48087580 agcttgattccaccagaagatcgtcatta 48087552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 51695733 - 51695605
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  51695733 aacgacgaatacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaca 51695634  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      ||||||||||||||||||| |||||||    
T  51695633 acttgattccgccagaagatcatcattag 51695605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 6754294 - 6754495
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  6754294 cgaacgacgaaaacgtgacgatcatgttttgggagtacaacatgttctagttgatcgatatgcgggtaacgttgctgagatcaactgaagatattatcaa 6754393  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttg-aatgtggtaattcaaacttgtc 199  Q
     ||| |||||| || |||||||||| |||| ||| |||   ||||||||||  | ||||||||| |||||| || || |||| ||||||||||||||||     
T  6754394 cagtctgattctgctagaagatcgtgattatgtaggga---aatgcaccttccaactacaacaactgtcttactctgaaatggggtaattcaaacttgtt 6754490  T
Q  200 aaacg 204  Q
    |||||    
T  6754491 aaacg 6754495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 42950144 - 42950019
Alignment:
Q  6 gacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtt 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||| |  |    
T  42950144 gacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcggtttacgttgctgagatcaactgaagatatcatcaacaact 42950045  T
Q  106 tgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||||||||    
T  42950044 tgattccgccagaagatcgtcattag 42950019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 43477147 - 43477276
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||  |||||||||||||    
T  43477147 cgaacgacgaaaacgtgacgaacatgttttgggagcacagcatgttccagtggatcgatatgcaggtgacgttgatgagatcaaccgaagatatcatcaa 43477246  T
Q  101 aagtttgattccgccagaagatcgtcatta 130  Q
     |  ||||||||||||||||||||||||||    
T  43477247 caacttgattccgccagaagatcgtcatta 43477276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 33449268 - 33449044
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||||||            ||||||||||| ||||||||||| |    
T  33449268 cgaacgacgaaaacgtgaagaacatgttttgggagcacatcatgttccagtggatcgatatgc------------tgagatcaactgaagatatcatcca 33449181  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||| |||||||| |    |||||||||||  | ||||||||||||| ||||| || ||| ||||||||||||||||||    
T  33449180 aagtttgattccgccagaagatcgtaattaggtagg----gaatgcaccttccaactacaacaattgttttcctctggatggggtaattcaaacttgtca 33449085  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | ||| || ||||| | | |||| |||||||||    
T  33449084 aacggcaggactcaaacattcgtcagacatttccattgttc 33449044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 774467 - 774327
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||| |||||||||| || |||||||| ||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  774467 cgaacgatgaaaacgtgaagaacatgttttcggagcactgcatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaa 774368  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
     ||| ||||||| |||||||||||| |||||||| ||||||    
T  774367 gagtctgattccaccagaagatcgtgattaggtagggaatg 774327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 44835615 - 44835412
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||| ||| ||||||||||| | |||| ||||||||||| || ||||||||||     
T  44835615 gaacgacgaaaacgtgacgagcatgttttgggagcatagaatgttccagtggatggatatgcgggtaaggttgttgagatcaactgaaaatatcatcaac 44835516  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt-cctttg-aatgtggtaattcaaacttgtc 199  Q
    || ||||||||| ||||||||||||||||| || || | |  ||||  ||  | |||||||||||||||| |||||| |||| |||||||||||||||||    
T  44835515 agcttgattccgtcagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttacctttgaaatggggtaattcaaacttgtc 44835419  T
Q  200 aaacggc 206  Q
    |||||||    
T  44835418 aaacggc 44835412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 47065778 - 47065907
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||| ||     
T  47065778 gaacgaggaaaatgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcattaac 47065877  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||||||||||||||||||||||    
T  47065878 aacttgattccgccagaagatcgtcattag 47065907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 49218863 - 49218735
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    |||| |||||||||||||| |||||||||||||| || ||||||||||| |||||||||||| ||||||||||||||||||||| ||||||| ||||| |    
T  49218863 aacggcgaaaacgtgacgaacatgttttgggagcgcaacatgttccagtggatcgatatgcgagtgacgttgctgagatcaactgaagatattatcaaca 49218764  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      |||||||||||||||||||||||||||    
T  49218763 acttgattccgccagaagatcgtcattag 49218735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 53826824 - 53826621
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||||| | |||||||||||  || |||||||||||||||||| |||||||||||||     
T  53826824 gaacgacgaaaatgtgatgagcatgttttgggagcacaacatgttccaatggatcgatatgcatgtaacgttgctgagatcaactgaagatatcatcaac 53826725  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt-cctttg-aatgtggtaattcaaacttgtc 199  Q
    |  ||||||||||||||||||||||||||| || || | |  ||||  ||  | |||||||||||||||| ||| || |||| |||||||||||||||||    
T  53826724 aacttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttacctctgaaatggggtaattcaaacttgtc 53826628  T
Q  200 aaacggc 206  Q
    |||||||    
T  53826627 aaacggc 53826621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 203
Target Start/End: Complemental strand, 6464473 - 6464274
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||| ||||||| |||||     
T  6464473 gaacgacgaaaacgtgacaatcatgttttgggagcacaacatgttccagtggatcgatatgtgggtaacgttgctgagatcaactgaagatattatcaac 6464374  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttg-aatgtggtaattcaaacttgtca 200  Q
    ||| |||||| || |||||||||| ||||  || |||   ||||||||||  | ||||||||| | |||| || || |||| |||||||||||||||| |    
T  6464373 agtctgattctgcaagaagatcgtgattatataggga---aatgcaccttccaactacaacaactctcttactctgaaatggggtaattcaaacttgtta 6464277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 27187038 - 27187178
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  27187038 cgaacgacgaaaacatgacgaacatgttttgggagcacaacatgttccattggatcgatatgcgggtaacgttgctgagatcaactaaagatattatcaa 27187137  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
     | | ||||||||||| || ||||| |||||||| ||||||    
T  27187138 caatctgattccgccataatatcgtgattaggtagggaatg 27187178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 55268851 - 55268753
Alignment:
Q  139 atgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccatt 237  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  55268851 atgaatgcaccttttagctataacaattgtcttcctttgaatgaggtaattcaaacttgccaaacgacaggtctccaatattcgaccggcattcccatt 55268753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 20376010 - 20375808
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||| ||||||| ||| |||||||| ||||||| ||||||| ||| |||||||||||| || |||||||||||||||| ||||||||  | |||     
T  20376010 gaacgacgataacgtgaggagtatgttttgagagcacaacatgttcaagtagatcgatatgcgtgtaacgttgctgagatcaatttaagataataacaac 20375911  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttg-aatgtggtaattcaaacttgtca 200  Q
     |||||||||||||| || ||||| |||||||| |    |||||||||||  | |||||| ||||||||| || || |||| | |||||||||||||| |    
T  20375910 tgtttgattccgccaaaatatcgtgattaggtagg----gaatgcaccttccaactacaaaaattgtcttactctgaaatgggttaattcaaacttgtta 20375815  T
Q  201 aacggca 207  Q
    |||||||    
T  20375814 aacggca 20375808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 206
Target Start/End: Original strand, 18440875 - 18441037
Alignment:
Q  41 catgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaat 140  Q
    ||||||||||| |||||||||| | || |||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| ||||||||  ||      
T  18440875 catgttccagtggatcgatatgtgtgtaacgttgctgagatcaactgaagatattatcaacagtttgattccaccagaagatcgtgattaggta--ga-- 18440970  T
Q  141 gaatgcaccttttagctacaacaattgtcttcctttg-aatgtggtaattcaaacttgtcaaacggc 206  Q
    |||||||||||  | |||||||||||||||| || || |||  |||||||||| ||||| |||||||    
T  18440971 gaatgcaccttccaactacaacaattgtcttactctgaaattgggtaattcaagcttgttaaacggc 18441037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 206
Target Start/End: Original strand, 19485949 - 19486111
Alignment:
Q  41 catgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaat 140  Q
    ||||||||||| |||||||||| | || |||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| ||||||||  ||      
T  19485949 catgttccagtggatcgatatgtgtgtaacgttgctgagatcaactgaagatattatcaacagtttgattccaccagaagatcgtgattaggta--ga-- 19486044  T
Q  141 gaatgcaccttttagctacaacaattgtcttcctttg-aatgtggtaattcaaacttgtcaaacggc 206  Q
    |||||||||||  | |||||||||||||||| || || |||  |||||||||| ||||| |||||||    
T  19486045 gaatgcaccttccaactacaacaattgtcttactctgaaattgggtaattcaagcttgttaaacggc 19486111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 37282039 - 37282137
Alignment:
Q  118 aagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaa 216  Q
    |||||||| | |||||||||||||||||||||||  | || |||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||||    
T  37282039 aagatcgttagtaggtacggaatgaatgcaccttccaactgcaacaattgttttcctttgaatggggtaattcaaacttgttaaacggcatgactccaa 37282137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 36721021 - 36720916
Alignment:
Q  118 aagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaat 217  Q
    ||||| |||| |||||||| ||||||| ||||||| | || ||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||     
T  36721021 aagattgtcagtaggtacgaaatgaattcacctttcaactgcaacaattgtcttcctttgaatgaggtaattcaaacttgttaaacggcaggactccaac 36720922  T
Q  218 attcga 223  Q
    ||||||    
T  36720921 attcga 36720916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 27187558 - 27187645
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttcat 243  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||| || ||||| ||| |||| | |||||||||    
T  27187558 ctacaacaattgtcttcctttgaatgaggtaattcaaacttgttaaacggcaggactcaaacattcgcccgacatttctattgttcat 27187645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 14265507 - 14265628
Alignment:
Q  13 acgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattcc 112  Q
    ||||||||| |||||||||||| |||| |||||| | || ||||||| || | || ||||| ||||||| |||| |||||||  || | |||||||||||    
T  14265507 acgtgacgaacatgttttgggaccacaacatgttaccgtggatcgatttgtgtgtaacgttactgagattaactaaagatattctccagagtttgattcc 14265606  T
Q  113 gccagaagatcgtcattaggta 134  Q
    ||| ||||||||| ||||||||    
T  14265607 gcctgaagatcgtgattaggta 14265628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 43570486 - 43570534
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  43570486 caacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 43570534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 45100118 - 45100070
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  45100118 caacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 45100070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 7246645 - 7246558
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||  || | ||| | ||||||||||||||||||||||||| |||||    
T  7246645 ctacaacaattgtcttacctttgaatggggtaaattcaaacttgcgaagcagcaggactccaatattcgaccggcattcccaatgttc 7246558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 14632020 - 14632067
Alignment:
Q  158 acaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacgg 205  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  14632020 acaacaattgtcttcctttgaatggggtaattcaaacttgttaaacgg 14632067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 41804453 - 41804366
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| |||||||||||||| | | | | ||||||||||||||||||||||||| |||||    
T  41804453 ctacaacaattgtgttacctttgaatggggtaaattcaaacttgtcaagcagtaggactccaatattcgaccggcattcccaatgttc 41804366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 51015853 - 51015910
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaa 216  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||||| | ||||||    
T  51015853 caacaattgtcttcatttgaatggggtaattcaaacttgttaaacggcaggactccaa 51015910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 10053029 - 10052981
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  10053029 caacaattgtcttcctttgaattgggtaattcaaacttgttaaacggca 10052981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 34471719 - 34471671
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  34471719 caacaattgtcttcctttgaatggggtgattcaaacttgttaaacggca 34471671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 46346255 - 46346207
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  46346255 caacaattgtcttcctctgaatggggtaattcaaacttgttaaacggca 46346207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 46413964 - 46413916
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  46413964 caacaattgtcttcatttgaatggggtaattcaaacttgttaaacggca 46413916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 52569052 - 52569004
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  52569052 caacaattgtcttcctctgaatgaggtaattcaaacttgttaaacggca 52569004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 39416611 - 39416536
Alignment:
Q  141 gaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaa 216  Q
    |||||||| ||| | |||||||||||||||| || || ||| |||||||||||||||| || | ||||||||||||    
T  39416611 gaatgcacatttcaactacaacaattgtcttgctctggatggggtaattcaaacttgttaatcagcatgtctccaa 39416536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 41578456 - 41578369
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| |||||||||| ||||| |||||||||| ||| | ||| | ||||||||||||| ||||||| ||| |||||    
T  41578456 ctacaacaattgtcttacctttgaatgaggtaaattcaaacttgccaagcagcaggactccaatattcgatcggcatttccaatgttc 41578369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 49273979 - 49274018
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgt 198  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  49273979 caacaattgtcttcctttgaatgaggtaattcaaacttgt 49274018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 34646900 - 34646810
Alignment:
Q  118 aagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaat-gtggtaattcaaacttgtcaaacggca 207  Q
    |||||| ||| ||||| | |||||||||||||||  | || |||||||||||||||| | ||| | |||||||||||||||| ||||||||    
T  34646900 aagatcctcagtaggtgcagaatgaatgcaccttccaactgcaacaattgtcttcctctaaatgggggtaattcaaacttgttaaacggca 34646810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 2429063 - 2429111
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| |||||| ||||||| |||||||| ||||||||    
T  2429063 caacaattgtcttcctctgaatggggtaatttaaacttgttaaacggca 2429111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 7246670 - 7246718
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  7246670 caacaattgtcttccactgaatggggtaattcaaacttgttaaacggca 7246718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 7954774 - 7954858
Alignment:
Q  46 tccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcatta 130  Q
    |||||||||||||||| || || || ||| ||||||||||| ||||| | ||||| ||| | ||| |||||||||||||| ||||    
T  7954774 tccagttgatcgatatacgtgtaactttgatgagatcaactaaagattttatcaacagtcttatttcgccagaagatcgtgatta 7954858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 25887717 - 25887571
Alignment:
Q  23 catgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagat 122  Q
    ||||||||||||||||| |||||||  || |||| ||||| | |  |||||| ||||||||||| |||||||  || | ||||||||||||| |||| ||    
T  25887717 catgttttgggagcacaacatgttctcgtggatc-atatgtgtggaacgttgttgagatcaactgaagatattctccacagtttgattccgctagaatat 25887619  T
Q  123 cgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
    ||| ||||  || | |  |||||||||||  | ||||||||||||||||    
T  25887618 cgtgatta-ttaggtagggaatgcaccttccaactacaacaattgtctt 25887571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 41578481 - 41578529
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||| ||||| |||||| |||||||||||||||| ||||||||    
T  41578481 caacaattgtgttcctctgaatggggtaattcaaacttgttaaacggca 41578529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 42323033 - 42322985
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| | |||| |||||||||||||||| ||||||||    
T  42323033 caacaattgtcttcctctaaatggggtaattcaaacttgttaaacggca 42322985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 42323061 - 42323145
Alignment:
Q  159 caacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||| || ||||||||||  |||| |||||||||| ||| | ||||| ||||||| |||||||||||||||||| ||||    
T  42323061 caacaattgtgttacctttgaatggagtaaattcaaacttgccaagcagcatgactccaatgttcgaccggcattcccatagttc 42323145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 43570458 - 43570374
Alignment:
Q  159 caacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| |||||||||| ||||| |||||||||| |||   ||| | ||||||||| ||||||||||||||| |||||    
T  43570458 caacaattgtcttgcctttgaatgaggtaaattcaaacttgccaattagcaggactccaatatacgaccggcattcccaatgttc 43570374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 46346283 - 46346367
Alignment:
Q  159 caacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| |||||||||| ||||| |||||||||  ||| | ||||| |||||||||| || ||||||||||| |||||    
T  46346283 caacaattgtcttacctttgaatgaggtaaattcaaacttaccaagcagcatgactccaatatttgatcggcattcccaatgttc 46346367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 51012930 - 51012882
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| |||||| ||||||||||| |||| ||||||||    
T  51012930 caacaattgtcttcctctgaatggggtaattcaaatttgttaaacggca 51012882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 2429038 - 2428951
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| |||||||||| ||||| |||||| ||  ||| | | | | ||||||||||||||||||||||||| |||||    
T  2429038 ctacaacaattgtcttacctttgaatggggtaaattcaaatttaccaagcagtaggactccaatattcgaccggcattcccaatgttc 2428951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 8633033 - 8633120
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| |||||||||| ||| | ||| | |||||| |||||| ||||||| |||||||||    
T  8633033 ctacaacaattgtgttacctttgaatggggtaaattcaaacttgccaagcagcaagactccaacattcgatcggcatttccattgttc 8633120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 34471744 - 34471831
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| |||||||||||||| |  |||| ||||||| |||||||| ||||| ||| ||||    
T  34471744 ctacaacaattgtgtttcctttgaatggggtaaattcaaacttgtcaagcaacatgactccaatgttcgaccgacattctcatagttc 34471831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 34646935 - 34647022
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| ||||||||||||||||  |||| ||||||| ||  |||| ||||||||| ||||    
T  34646935 ctacaacaattgtgttacctttgaatggggtaaattcaaacttgtcaaacaacatgactccaatgtttaaccgacattcccatagttc 34647022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 50458648 - 50458597
Alignment:
Q  190 caaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||| ||||||||| | |||||||||||||||| ||||| ||||||||    
T  50458648 caaacttggcaaacggcaggactccaatattcgaccgacattcgcattgttc 50458597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 52569077 - 52569164
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| ||| |||||| ||||| |||||||||| ||| | ||| | ||||||||||||  ||||||||||| |||||    
T  52569077 ctacaacaattgtcttacctgtgaatgaggtaaattcaaacttgccaagcagcaggactccaatattcgttcggcattcccaatgttc 52569164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 55206524 - 55206479
Alignment:
Q  162 caattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||| |||||| || ||||||||||||| ||||||||    
T  55206524 caattgtcttcctctgaatggggcaattcaaacttgttaaacggca 55206479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 17267398 - 17267306
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaa 119  Q
    |||||| |||||| |||||||| || ||||||||||   || |||||||||||||   || |||||||  |||| |||||||||| |||||||    
T  17267398 ttttggcagcacatcatgttcccgtggatcgatatgtaagttacgttgctgagattgcctaaagatattctcaagagtttgattctgccagaa 17267306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 19452790 - 19452742
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| |||| |  ||||||||||||||| ||||||||    
T  19452790 caacaattgtcttcctctgaaagatgtaattcaaacttgttaaacggca 19452742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 51015825 - 51015741
Alignment:
Q  159 caacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||| || |||||||||| ||||| |||||| ||| ||| | ||| | ||||||||| ||||||||||||||| |||||    
T  51015825 caacaattgtgttacctttgaatggggtaaattcaaatttgccaagcagcaggactccaatatacgaccggcattcccaatgttc 51015741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 41857102 - 41856862
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  41857102 cgaacgacgaaaatgtgacgagcatattttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 41857003  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  41857002 aagtttgattccgccagaagatcgtcattaggtacgaaatgaatgcaccttttagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 41856903  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  41856902 aacggcaggtctccaatattcgaccgacattcccattgttc 41856862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 42603540 - 42603777
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||  || ||||||||||    
T  42603540 cgaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgctgaaatcaaccgaatatatcatcaa 42603639  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  42603640 aagtttgattccgccaaaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 42603739  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||   || ||||||||||||||||||||||||||| |||||    
T  42603740 aa---caggtctccaatattcgaccggcattcccactgttc 42603777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 40702446 - 40702687
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||    
T  40702446 cgaacgacgaaaacgtgacgagcatgttttgggaacaaaacatgttccagtggatcgatatgcggatgacgttgctgagatcaactgaatatatcatcaa 40702545  T
Q  101 aagtttgattccgccagaagatcg-tcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtc 199  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  40702546 aagtttgattccgccaaaagatcggtcattaggtacggaatgaatgcacattttagctacaacaattgtcttcctttgaatggggtaattcaaacttgcc 40702645  T
Q  200 aaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  40702646 aaacggcaggtctccaatattcgaccgacattcccattgttc 40702687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 44943209 - 44942972
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  44943209 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 44943110  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||| |||||||| | ||||||||||||| ||    
T  44943109 aagtttgattccgccagaagattgtcattaggtacggaatgtatgcaccttccagctacaacaattgtcttcgtttgaatgagataattcaaacttgcca 44943010  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattg 238  Q
    |||| || |||||||||||||   ||||||||||||||    
T  44943009 aacgacaggtctccaatattcagacggcattcccattg 44942972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 18440423 - 18440183
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  18440423 cgaacgatgaaaacgtgacgagcatgttttaggagcacaacatgttccagtggatcgatatgagggtgacgttgctgagataaactgaagatatcatcaa 18440324  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||||||||| ||  ||    
T  18440323 aagtttgattacgcgagaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattatcttcctttgaatggggtaattcaaattttcca 18440224  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||| ||||| ||||||||    
T  18440223 aacggcaggtctccaatattcgaccgacattctcattgttc 18440183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 19242289 - 19242050
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||| |||||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  19242289 gaacgacaaaaacgtgacgagcatgttttgggaatacaacatgttccagtggatcgatatgcgggtgacgttgctaagatcaactgaagatatcatcaaa 19242190  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    ||||||||||  | ||||||| |||||||||||| |||||||||||||||  | |||||||||||||||| || |||||| |||| |||||||||| |||    
T  19242189 agtttgattctacgagaagattgtcattaggtaccgaatgaatgcaccttccaactacaacaattgtctttctctgaatggggtagttcaaacttgccaa 19242090  T
Q  202 acggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||  ||||||| |||||||| ||||||||||||||    
T  19242089 acggcataactccaatgttcgaccgacattcccattgttc 19242050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 19315473 - 19315234
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||| |||||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  19315473 gaacgacaaaaacgtgacgagcatgttttgggaatacaacatgttccagtggatcgatatgcgggtgacgttgctaagatcaactgaagatatcatcaaa 19315374  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    ||||||||||  | ||||||| |||||||||||| |||||||||||||||  | |||||||||||||||| || |||||| |||| |||||||||| |||    
T  19315373 agtttgattctacgagaagattgtcattaggtaccgaatgaatgcaccttccaactacaacaattgtctttctctgaatggggtagttcaaacttgccaa 19315274  T
Q  202 acggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||  ||||||| |||||||| ||||||||||||||    
T  19315273 acggcataactccaatgttcgaccgacattcccattgttc 19315234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 15032452 - 15032253
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  15032452 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 15032353  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||| || || | |  ||||  ||  | |||||||| ||||||||||||||||| ||||||||||||||||||    
T  15032352 aagtttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtcttcctttgaatggggtaattcaaacttgtca 15032256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 89 - 241
Target Start/End: Original strand, 26486847 - 26486999
Alignment:
Q  89 agatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaat 188  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  26486847 agatatcatcaacagcttgattccgtcagaagatcgtcattaggtacggaatgaatgcatctcttagctacaacaattgtcttcctttgaatgaggtaat 26486946  T
Q  189 tcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  26486947 tcaaacttgtcaaacggcaggtctccaatattcgaccggtattcccattgttc 26486999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 485386 - 485187
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||| |||||| ||||||||| |||||||||||||    
T  485386 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttctagtggatcgatatgcggatgaagttgcttagatcaactgaagatatcatcaa 485287  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | ||||||||||||| |||||||||||| ||||||||||||||||||    
T  485286 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtattcctttgaatgaggtaattcaaacttgtca 485190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 40414697 - 40414826
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||     
T  40414697 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgtttcagttgattgatatgcgggtgacgttgctgagatcaactgaagatatcatcaac 40414796  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||| ||||||||||||||||||    
T  40414797 agcttgattccaccagaagatcgtcattag 40414826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 43693224 - 43693353
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||     
T  43693224 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaac 43693323  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||| ||||||||||||||||||    
T  43693324 aacttgattcctccagaagatcgtcattag 43693353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 26452413 - 26452541
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  26452413 aacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaca 26452512  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      |||||||||| ||||||||||||||||    
T  26452513 acttgattccgctagaagatcgtcattag 26452541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 42169088 - 42168884
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  42169088 cgaacaacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgcagagatcaactgaagatatcatcaa 42168989  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt-cctttg-aatgtggtaattcaaacttgt 198  Q
     || ||||||||||||||||||||||||||| || |||    |||||  ||  | |||||||||||||||| |||||| |||| |||||||||||||||     
T  42168988 cagcttgattccgccagaagatcgtcattagtta-ggataagatgca--ttccaactacaacaattgtcttacctttgaaatggggtaattcaaacttgc 42168892  T
Q  199 caaacggc 206  Q
    ||||||||    
T  42168891 caaacggc 42168884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 38034053 - 38033923
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  38034053 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaa 38033954  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     || ||||||||||| |||||||||||||||    
T  38033953 tagcttgattccgccggaagatcgtcattag 38033923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 33799678 - 33799549
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||     
T  33799678 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcggataacgttgctgagatcaactgaagatatcatcaac 33799579  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||||||||||||||||||||||    
T  33799578 aacttgattccgccagaagatcgtcattag 33799549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 40415344 - 40415473
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||||     
T  40415344 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttcccgtggatcgatatgcaggtgacgttgttgagatcaacttaagatatcatcaac 40415443  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || ||||||||| |||||||||||||||||    
T  40415444 agcttgattccgtcagaagatcgtcattag 40415473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 41275482 - 41275610
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  41275482 aacgacgaaaacgtgacgagcatgttttgagagcacaacatgttccaatggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaca 41275581  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      |||||||||||||||||||||||||||    
T  41275582 acttgattccgccagaagatcgtcattag 41275610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2417001 - 2417131
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||    
T  2417001 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagttgatcgatatgcaggtgacgttgatgagatcaaccgaagatatcatcaa 2417100  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||||| ||||||||||||||||||    
T  2417101 caacttgattccaccagaagatcgtcattag 2417131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 41363742 - 41363872
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  41363742 cgaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggttacgttgctgagatcaactgaagatatcatcaa 41363841  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||||| ||||||||||||||||||    
T  41363842 caacttgattcctccagaagatcgtcattag 41363872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 43638804 - 43638675
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||  ||||||||||| || |||||||||||||||||| |||||||||||||     
T  43638804 gaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttccagtgcatcgatatgcgcgtaacgttgctgagatcaactgaagatatcatcaac 43638705  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||| ||||||||||||||||||||    
T  43638704 aacttgatttcgccagaagatcgtcattag 43638675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 3589393 - 3589228
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||| ||||||| | ||||||||||||||||||| |||||||||| |||||||||||| || || ||| ||||||||||| |||| || |||||     
T  3589393 gaacgacgataacgtgatgggcatgttttgggagcacaggatgttccagtggatcgatatgcgtgtaacattgttgagatcaactgaagacattatcaac 3589294  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
    |||||||||||||||||||||||| |||||||| |    |||||||||||  | ||||||||||||||||    
T  3589293 agtttgattccgccagaagatcgtgattaggtagg----gaatgcaccttcaaactacaacaattgtctt 3589228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 24861431 - 24861559
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| | | ||| ||||||||||||| |||||||||||||||| ||||||||||||| |    
T  24861431 aacgacgaaaatgtgacgagcatgttttgggagcacaacatgttcaattggattgatatgcgggtgatgttgctgagatcaactgaagatatcatcaaca 24861530  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      ||||||| |||||||||||||||||||    
T  24861531 acttgattctgccagaagatcgtcattag 24861559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 34615039 - 34615169
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||||| ||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  34615039 cgaacgacgaaaacgtgacgaacatgttttgggagcacaacatgatccagtggattgatatgcgggtaacgttgctgagatcaactgaagatatcatcaa 34615138  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||||| ||||||||| || |||||    
T  34615139 caacttgattccaccagaagatagtaattag 34615169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 28706269 - 28706140
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||| || |||||| ||||||||||| |||||||||||||     
T  28706269 gaacaacgaaaacgtgacgagcatgttttgggagcacaacatgttttagtggatcgatatgcgtgtaacgttgttgagatcaactgaagatatcatcaac 28706170  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
     | |||||||||||||||||| ||||||||    
T  28706169 cgcttgattccgccagaagattgtcattag 28706140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 203
Target Start/End: Complemental strand, 31171911 - 31171744
Alignment:
Q  34 agcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggt 133  Q
    ||||||||||||| | || |||||||||| ||||||||||||||||||||||| || |||| ||||| |||||||||||||||||||||||| |||||||    
T  31171911 agcacagcatgttaccgtggatcgatatgtgggtgacgttgctgagatcaactgaaaatattatcaacagtttgattccgccagaagatcgtgattaggt 31171812  T
Q  134 acggaatgaatgcaccttttagctacaacaattgtctt-cctttg-aatgtggtaattcaaacttgtcaaac 203  Q
    | |    |||||||||||  | |||||||||||||||| ||| || |||| | |||||||||||||| ||||    
T  31171811 atg----gaatgcaccttccaactacaacaattgtcttacctctgaaatgagataattcaaacttgttaaac 31171744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26484663 - 26484756
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatat 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  | || ||||||||||||||| |||||||    
T  26484663 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgcataacattgctgagatcaactgaagatat 26484756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 16575866 - 16575966
Alignment:
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||| |||| |||||| | ||||   |||||||||  | |||||||||||||||||||||||||| ||||||||| ||||| ||    
T  16575866 aagtttgattccgccagaagttcgtgattaggcagggaa---atgcaccttccaactacaacaattgtcttcctttgaatgaggtaattcatacttgcca 16575962  T
Q  201 aacg 204  Q
    ||||    
T  16575963 aacg 16575966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 22549232 - 22549295
Alignment:
Q  65 ggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||| ||||||| |||||||||||||    |||||||||||||||||||||||||||    
T  22549232 ggtgacgttgctgacatcaactgaagatatcatcaa---cttgattccgccagaagatcgtcattag 22549295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 41856614 - 41856566
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  41856614 caacaattgtcttcctatgaatggggtaattcaaacttgttaaacggca 41856566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 2417541 - 2417591
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatg 209  Q
    |||||||||||||||| |||||| || ||||||||||||| ||||||||||    
T  2417541 caacaattgtcttcctctgaatggggcaattcaaacttgttaaacggcatg 2417591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 40702908 - 40702822
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgtt 240  Q
    ||||||||||||| || |||||||||| ||||| |||||||||  ||| |  |||| ||||||||||||||||||||||||| ||||    
T  40702908 ctacaacaattgtgttacctttgaatggggtaaattcaaactttccaagcaacatgactccaatattcgaccggcattcccaatgtt 40702822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 40702933 - 40702981
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| |||||| || ||||||||||||| ||||||||    
T  40702933 caacaattgtcttcctctgaatggggcaattcaaacttgttaaacggca 40702981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16575778 - 16575837
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgata 60  Q
    ||||| ||||||||| || ||||||||||||||| |||| |||||||||||  |||||||    
T  16575778 cgaacaacgaaaacgggatgagcatgttttgggaccacaacatgttccagtgcatcgata 16575837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 28167385 - 28167298
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| |||||||||| ||| | ||| | ||||||||| ||||| ||||||||| |||||    
T  28167385 ctacaacaattgtgttacctttgaatggggtaaattcaaacttgccaagcagcaggactccaatatacgaccagcattcccaatgttc 28167298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 41856639 - 41856726
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| |||||||||| ||||| |||||||||  ||| | ||| | ||| ||||||| ||||||||||||| |||||    
T  41856639 ctacaacaattgtcttacctttgaatggggtaaattcaaacttaccaagcagcaggactctaatattcaaccggcattcccaatgttc 41856726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 33799414 - 33799332
Alignment:
Q  141 gaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcga 223  Q
    |||||||| ||| | |||||||||||||||| || || ||| || ||||||||||||| || ||||| | |||||| ||||||    
T  33799414 gaatgcacatttcaactacaacaattgtcttactctggatggggcaattcaaacttgttaatcggcaggactccaacattcga 33799332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 42604023 - 42604068
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacg 204  Q
    ||||||||||||||||||||||| |  ||||||||||||| |||||    
T  42604023 caacaattgtcttcctttgaatgggacaattcaaacttgttaaacg 42604068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 18439937 - 18439893
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    ||||||||||||| || |||||| |||||||||||||||| ||||    
T  18439937 caacaattgtctttctctgaatggggtaattcaaacttgttaaac 18439893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 28167412 - 28167444
Alignment:
Q  160 aacaattgtcttcctttgaatgtggtaattcaa 192  Q
    |||||||||||||||||||||| ||||||||||    
T  28167412 aacaattgtcttcctttgaatgaggtaattcaa 28167444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 28705789 - 28705721
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgac 224  Q
    |||||||||||||||| || || ||| || ||||||||||||| || ||||| | |||||| |||||||    
T  28705789 ctacaacaattgtcttactctggatggggcaattcaaacttgtaaatcggcaggactccaacattcgac 28705721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 48315309 - 48315069
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  48315309 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtagatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 48315210  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||| |||||||| ||||||||||||||| ||    
T  48315209 aagtttgattccgccataagatcgtcattaggtacggaatgaatgcaccttccagctacaacgattgtcttcatttgaatggggtaattcaaacttgcca 48315110  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  48315109 aacggcaggtctccaatattcgaccggcattcccattgttc 48315069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 241
Target Start/End: Complemental strand, 21187423 - 21187188
Alignment:
Q  6 gacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtt 105  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21187423 gacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtt 21187324  T
Q  106 tgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacgg 205  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  21187323 tgattccgtcagaagatcgtcattaggtactgaatgaatgcacctttcagctacaataattgtcttcctttgaatgaggtaattcaaacttgtcaaacgg 21187224  T
Q  206 catgtctccaatattcgaccggcattcccattgttc 241  Q
    || ||||| |||||||||||||||||||||||||||    
T  21187223 caggtctcaaatattcgaccggcattcccattgttc 21187188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 30354944 - 30354704
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| || ||||||||||||||||| || |||||||||||||    
T  30354944 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgtggatgacgttgctgagatcagctgaagatatcatcaa 30354845  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  30354844 aagtttgattctgccaaaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgaggtaattcaaacttgcca 30354745  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  30354744 aacggcaggtctccaatattcgaccggcatttccactgttc 30354704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 41048861 - 41049101
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  41048861 cgaacgacgaaaacgcgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 41048960  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||  |    
T  41048961 aagtttgattccgccagaagatcgtcattaggtacgaaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcaa 41049060  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| ||||| |||||||||||| ||||||||||||||    
T  41049061 aacggcaagtctctaatattcgaccgacattcccattgttc 41049101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 46862323 - 46862086
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| ||||||| |||||    
T  46862323 cgaacgacgaaaacgtgacgagcttgttttgggagcacagcatgttccagtggatcgatatgcgagtgacgttgctgagattaactgaagatatgatcaa 46862224  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||||| |||||||| ||||||||||||||| ||    
T  46862223 aagtttgattccgccagaagatcgtcataaggtacggaatgaatgcaccttccagatacaacaattgtcttcttttgaatggggtaattcaaacttgcca 46862124  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattg 238  Q
    |||||||||||||||||||||||||||||||| |||||    
T  46862123 aacggcatgtctccaatattcgaccggcattctcattg 46862086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 43351228 - 43350989
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  43351228 cgaacgacgaaaacatgacgagcatgttttgggagcacaacatgttccagtggatcgatatg-gggtgacgttgctgagatcaactgaagatatcatcaa 43351130  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    | || ||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  43351129 atgtctgattccaccagaagatcgtcattaggtacagaatgaatgcaccttccagctacaacaattgtcttcctttgaatgaggtaattcaaacttgcca 43351030  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||| |||| |||||||||    
T  43351029 aacggcaggtctccaatattcgaccgacatttccattgttc 43350989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 36393953 - 36393714
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  36393953 cgaacgacgaaaacgtgacgagcatgttttgggagcacaatatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 36393854  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||| ||    
T  36393853 aagtttgattccgccataagatcttcattaggtactgaatgaatgcaccttccagctacgacaattgtcttcctttgaatggggtaattcaaacttgcca 36393754  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgtt 240  Q
    |||| || || ||||||||| ||||||||||||| |||||    
T  36393753 aacgacaggtttccaatatttgaccggcattcccgttgtt 36393714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 42735340 - 42735580
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| |||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  42735340 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatattctagtgaatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 42735439  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  42735440 aagtttgattccgcaagaagatcgtcattaggtaccgaatgaatgcaccttccagctacaacaattgtcttcctttgaatgtggtaattcaaacttgcca 42735539  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||| | | ||||||| ||||||  |||||| ||||||||    
T  42735540 aacggaaggactccaattttcgactagcattctcattgttc 42735580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 48270726 - 48270948
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  48270726 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 48270825  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||  | |||||||||||||||| |||| |||| ||||||||||||||| ||    
T  48270826 aagtttgattccgccagaagatcgtcgttaggtacggaatgaatgcacattccaactacaacaattgtctttcttttaatggggtaattcaaacttgcca 48270925  T
Q  201 aacggcatgtctccaatattcga 223  Q
     |||||| ||||| |||||||||    
T  48270926 gacggcaggtctcaaatattcga 48270948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 15338032 - 15337804
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    |||||||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| || || |    
T  15338032 aacgacgaaaacgtgatgagcatgttttgggagcacaacatgtttcagtggatcgatatgcgggtaacgttgctgagatcaactgaagatattataaaca 15337933  T
Q  103 gtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaa 202  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||| || ||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  15337932 gtctgattccgccagaagatcgtcattaggtatggaatgaatgcaccttctaactaaaacaattgtcttcctttgaatggggtaattcaaacttgccaaa 15337833  T
Q  203 cggcatgtctccaatattcgaccggcatt 231  Q
    || |||||||||| ||||||| |||||||    
T  15337832 cgacatgtctccagtattcgatcggcatt 15337804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 28114522 - 28114282
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||||| | |||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  28114522 cgaacgacgaaaacatgacgagcatgttttaggagcacaacatgttccaatggatcgaaatgtgggtgacgttgctgagatcaactgaagatatcatcaa 28114423  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    || |||||||| | || ||||| |||||||||||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||  ||    
T  28114422 aaatttgattctgtcaaaagattgtcattaggtaccgaataaatgcaccttccagctacaacaattgtcttcctttgaatgtggtaattcaaactttcca 28114323  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | ||||||| |||||||||||||||||||||||    
T  28114322 aacggcacgactccaatgttcgaccggcattcccattgttc 28114282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 21650602 - 21650840
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| |||||||||||||| ||||| |||| ||||||||||| |||||||||| |||| |||||||||||||||||| ||||||| |||||    
T  21650602 cgaacgacgaaaatgtgacgagcatgttatgggatcacaacatgttccagtggatcgatatgtgggtaacgttgctgagatcaactgaagatattatcaa 21650701  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     ||| ||||||||||| |||||| ||||||| ||| ||||||||| ||||   |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  21650702 cagtctgattccgccataagatcatcattagttaccgaatgaatgaacctaccagctacaacaattgtcttcctttgaatg-ggtaattcaaacttgcca 21650800  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgtt 240  Q
    ||| ||| | ||||||||||| |||| |||||||||||||    
T  21650801 aacagcaggactccaatattcaaccgacattcccattgtt 21650840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 21614889 - 21614689
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  21614889 cgaacgacgaaaacgcgacgagcatgttttgggagcacatcatgttctagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaa 21614790  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    || ||||||||||||||||| |||| |||||||| |||   ||||||||||| | |||||||||||||||||||||||||| ||||||||||| || |||    
T  21614789 aattttgattccgccagaagttcgtgattaggtaggga---aatgcacctttcaactacaacaattgtcttcctttgaatgaggtaattcaaaattatca 21614693  T
Q  201 aacg 204  Q
    ||||    
T  21614692 aacg 21614689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 20564837 - 20565036
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  20564837 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 20564936  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| |||| |||||||||||| ||||||||||||||||||    
T  20564937 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtattcctttgaatgaggtaattcaaacttgtca 20565033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 7 - 203
Target Start/End: Complemental strand, 9367243 - 9367050
Alignment:
Q  7 acgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagttt 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  9367243 acgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagttt 9367144  T
Q  107 gattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    |||||||||| |||||||||||||| || || | |  ||||  ||  | ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  9367143 gattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtattcctttgaatgaggtaattcaaacttgtcaaac 9367050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 34140945 - 34141073
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34140945 aacgacgaaaacgtgacggacatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaa 34141044  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
    |||||||| ||||| ||||||||||||||    
T  34141045 gtttgatttcgccataagatcgtcattag 34141073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17839401 - 17839532
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||| | |||||||||||||    
T  17839401 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaattgaagatatcatcaa 17839500  T
Q  101 aagtttgattccgcc-agaagatcgtcattag 131  Q
    ||||||||||||||| | ||||||||||||||    
T  17839501 aagtttgattccgccaaaaagatcgtcattag 17839532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 18237643 - 18237772
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||| |||||||||||||     
T  18237643 gaacgacgaaaacatgacgagcatattttgggagcacatcatgttccagtggatcggtatgcgggtaacgttgctgagatcaactgaagatatcatcaac 18237742  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||||||||||||    
T  18237743 agtttgattccgccagaagatcgtcattag 18237772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 39477368 - 39477239
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||     
T  39477368 gaacgacgaaaacatgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactaaagatatcattaac 39477269  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||||||||||||||||||||||    
T  39477268 aacttgattccgccagaagatcgtcattag 39477239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 1642716 - 1642518
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||| || |||||| ||||||||||| ||||||| |||||    
T  1642716 cgaacgatgaaaacgtgaggagcatgttttgggagcacaacatgttcaagtggatcgatatgcgtgtaacgttgttgagatcaactgaagatattatcaa 1642617  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     |||||||||||||||||||||||| |||||||| |    |||||||||||  | |||||||||||||||| | |||||  ||| ||||||||||||| |    
T  1642616 cagtttgattccgccagaagatcgtgattaggtagg----gaatgcaccttccaactacaacaattgtcttaccttgaa-atgggaattcaaacttgtta 1642522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 17183290 - 17183412
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  17183290 cgaacgacgaaaacgtgacgaacatgttttggaagcacaacatgttccagtggatcgatatgcgggtgatgttgctgagatcaactgaagatatcatcaa 17183389  T
Q  101 aagtttgattccgccagaagatc 123  Q
    ||||||||||| |||||||||||    
T  17183390 aagtttgattctgccagaagatc 17183412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 10523146 - 10523346
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttcca-gttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatca 99  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |  || ||||||||||||||||| ||| || ||||||||| || |||||||||    
T  10523146 cgaacgacgaaaacgtgacgagcatgttttgggagcaccacatgtttcttgtggatcgatatgcgggtgaagtttcttagatcaactgaatatatcatca 10523245  T
Q  100 aaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtc 199  Q
    |||||||||||||||| ||| ||||||||||| || || | |  || |  ||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  10523246 aaagtttgattccgcctgaaaatcgtcattagttagggtaag-gtgta--ttccaactacaacaattgtcttcctttgaatgtggtaattcaaacttgtc 10523342  T
Q  200 aaac 203  Q
    ||||    
T  10523343 aaac 10523346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 30360597 - 30360724
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||| |||||||||| ||||    
T  30360597 aacgacgaaaacgtaacgagcatgttttgggagcacaacatgttctagtggattgatatgcgggtg-cgttgctgagatcaactgaagatatcataaaaa 30360695  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||||||||||    
T  30360696 gtttgattccgccagaagatcgtcattag 30360724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 47268977 - 47269105
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||| || ||||||||||     
T  47268977 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagattaactaaaaatatcatcaac 47269076  T
Q  102 agtttgattccgccagaagatcgtcatta 130  Q
    | ||||||||||||| |||||||||||||    
T  47269077 aatttgattccgccaaaagatcgtcatta 47269105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 2206152 - 2206036
Alignment:
Q  15 gtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgc 114  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||    
T  2206152 gtgacgagcatgttttgggagcacaatatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacagcttgattccgc 2206053  T
Q  115 cagaagatcgtcattag 131  Q
    |||||||||||||||||    
T  2206052 cagaagatcgtcattag 2206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40588627 - 40588757
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  40588627 cgaacgacgaaaacatgatgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgttgagatcaactgaagatatcatcaa 40588726  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  ||||||| |||||||||||||||||||    
T  40588727 caacttgattcggccagaagatcgtcattag 40588757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 41217693 - 41217822
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||| |||| || ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  41217693 gaacgacgaaaaagtgaagaacatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaac 41217792  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  |||||||| ||||||||||||||||||    
T  41217793 aacttgattccaccagaagatcgtcattag 41217822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 48220870 - 48220743
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||| |||||||||||||     
T  48220870 gaacgacgaaaacgtgacgagcatgtt--gggagcacagcatgttccagtggatcaatatgcaggtgacggtgctgagatcaactgaagatatcatcaac 48220773  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||| ||| ||||||||||||||    
T  48220772 agcttgattccaccataagatcgtcattag 48220743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 2356367 - 2356534
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||| |||| ||||||||||||||||||||| ||||||||||||| | |||||||||||| || |||||| ||||||||||| |||||||||||||    
T  2356367 cgaacgacaaaaatgtgacgagcatgttttgggagaacagcatgttccaatggatcgatatgcgagtaacgttgttgagatcaactgaagatatcatcaa 2356466  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
    || ||||||||||| | |||| ||| |||||||| |||   |||||| |||  | ||||||||||||||||    
T  2356467 aaatttgattccgctataagaccgtgattaggtaggga---aatgcatcttccaactacaacaattgtctt 2356534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 20378831 - 20378613
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||  ||||||||||||| |||||||||||||||| ||||||| || ||     
T  20378831 gaacgacgaaaacgtgacgaacatgttttgggagcacaacatgttccagtggacagatatgcgggtgatgttgctgagatcaactgaagatataattaac 20378732  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    |  ||||||||||||||||||| ||||||| ||  || | || |  | ||  | ||||||||||||||||||| || ||| || ||||||||||||| ||    
T  20378731 aacttgattccgccagaagatcatcattagtta--gagt-aaggtgcattccaactacaacaattgtcttcctctggatggggcaattcaaacttgttaa 20378635  T
Q  202 acggcatgtctccaatattcga 223  Q
     ||||| | |||||| ||||||    
T  20378634 tcggcaggactccaacattcga 20378613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 203
Target Start/End: Original strand, 13920419 - 13920583
Alignment:
Q  36 cacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtac 135  Q
    |||||||| || |||| ||||||||||| ||||| |||||| ||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||| ||     
T  13920419 cacagcatattacagtggatcgatatgcaggtgaagttgcttagatcaactgaagatatcatcaaaaatttgatttcgccataagatcgtcattagttag 13920518  T
Q  136 ggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    || | | |||||  ||  | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  13920519 ggtaag-atgca--ttccaactacaacaattgtcttcctttgaatggggtaattcaaacttgtcaaac 13920583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 28979147 - 28979060
Alignment:
Q  5 cgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagat 92  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  28979147 cgacaaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagat 28979060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 45363367 - 45363251
Alignment:
Q  6 gacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtt 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||         ||||||||||||||||| ||||||||||||| |  |    
T  45363367 gacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtggatcgata---------cgttgctgagatcaactgaagatatcatcaacaact 45363277  T
Q  106 tgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||||||||    
T  45363276 tgattccgccagaagatcgtcattag 45363251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 17320272 - 17320134
Alignment:
Q  59 tatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagcta 158  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||| || || | |  ||||  ||  | |||    
T  17320272 tatgcggttgaagttgcttagatcaacttaagatatcatcaaaagtttgattctgccataaaatcgtcattagttagggtaag-gtgca--ttccaacta 17320176  T
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  17320175 caacaattgtcttcctttaaatggggtaattcaaacttgtca 17320134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 26603330 - 26603265
Alignment:
Q  5 cgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgac 70  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  26603330 cgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgtgggtgac 26603265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 26601839 - 26601777
Alignment:
Q  69 acgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattag 131  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  26601839 acgttgttgagatcaactgaagatatcatcaatagtttgattccgccagaagatcgtcattag 26601777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 28066359 - 28066466
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtc 126  Q
    |||||| |||||| |||||||| || ||||||||||   || ||||||||||||||  || |||||||  ||||||||||||||||||||||| |||||     
T  28066359 ttttggcagcacaacatgttcctgtggatcgatatgtttgtcacgttgctgagatcgtctgaagatattctcaaaagtttgattccgccagaacatcgtg 28066458  T
Q  127 attaggta 134  Q
    ||||||||    
T  28066459 attaggta 28066466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 11824839 - 11824911
Alignment:
Q  69 acgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
    ||||||| |||||||||| |||||||  |||| ||||||||||||| |||||||||| |||||||| ||||||    
T  11824839 acgttgcagagatcaactgaagatattttcaacagtttgattccgctagaagatcgtgattaggtagggaatg 11824911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 36393468 - 36393420
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  36393468 caacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 36393420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 20878027 - 20877941
Alignment:
Q  155 gctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||| |||||||| ||| ||||||||||||||| ||||||||| | |||||   | || ||| ||||||||||||||    
T  20878027 gctacaacaattgtgttcctttggatggggtaattcaaacttgccaaacggcaggactccagcgtacgtccgacattcccattgttc 20877941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 34139332 - 34139374
Alignment:
Q  89 agatatcatcaaaagtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  34139332 agatatcatcaaaagtttgattctgccagaagatcgtcattag 34139374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 21186967 - 21187048
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattccca 235  Q
    |||||||||||||||| |||||||||| ||||| |||||||||  ||| | ||| | |||||||||||||||||||||||||    
T  21186967 ctacaacaattgtcttacctttgaatggggtaaattcaaacttcccaagcagcaggactccaatattcgaccggcattccca 21187048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 21186942 - 21186894
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  21186942 caacaattatcttcctttgaatggggtaattcaaacttgttaaacggca 21186894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 48271187 - 48271100
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| |||||||||| ||||| |||||||||| ||| | ||||| ||| ||||||||||||  ||||||| |||||    
T  48271187 ctacaacaattgtcttacctttgaatggggtaaattcaaacttgccaagcagcatgactctaatattcgaccgatattcccaatgttc 48271100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 18149675 - 18149745
Alignment:
Q  71 gttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
    ||||| |||||||||| |||||||  |||| ||||||||| ||||||||||||||  ||||||| ||||||    
T  18149675 gttgcagagatcaactgaagatattctcaacagtttgattgcgccagaagatcgtatttaggtagggaatg 18149745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 46861837 - 46861787
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatg 209  Q
    |||||||||||||||| |||||| |||||||||||||||| |||| |||||    
T  46861837 caacaattgtcttcctctgaatggggtaattcaaacttgttaaacagcatg 46861787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 21651111 - 21651160
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacgg 205  Q
    |||||| ||||||||||||||||||| ||||||||||| |||| ||||||    
T  21651111 ctacaataattgtcttcctttgaatgaggtaattcaaatttgtaaaacgg 21651160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 3380727 - 3380663
Alignment:
Q  77 gagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
    |||||||||| |||||||  |||| | |||||||| ||||||||||||| |||||||| ||||||    
T  3380727 gagatcaactgaagatattctcaacaatttgattctgccagaagatcgtgattaggtagggaatg 3380663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 46861865 - 46861949
Alignment:
Q  159 caacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| |||||||||| ||||| |||||||||  ||| | ||| | |||||||||||||||| |||||||| |||||    
T  46861865 caacaattgtcttacctttgaatggggtaaattcaaactttccaagcagcaggactccaatattcgaccgacattcccaatgttc 46861949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 21614434 - 21614383
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||| |  ||| |||||||||||||||| ||||||||    
T  21614434 ctacaacaattgtcttcctctagatggggtaattcaaacttgttaaacggca 21614383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 30354483 - 30354570
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||| ||| || |||||||||| ||||| |||||||||| ||| | ||| | |||||||||||||||| |||||||| |||||    
T  30354483 ctacaacaactgtgttacctttgaatgaggtaaattcaaacttgccaagcagcaggactccaatattcgaccgacattcccaatgttc 30354570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 10224631 - 10224677
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacgg 205  Q
    |||||||||||||||||| |||| ||||||||||| |||| ||||||    
T  10224631 caacaattgtcttcctttaaatggggtaattcaaatttgttaaacgg 10224677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 20877695 - 20877645
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatg 209  Q
    |||||||||||||||| | |||  |||||||||||||||| ||||||||||    
T  20877695 caacaattgtcttcctctaaattgggtaattcaaacttgttaaacggcatg 20877645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 28114036 - 28113988
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| | |||| |||||||||||||||| ||| ||||    
T  28114036 caacaattgtcttcctctaaatggggtaattcaaacttgttaaatggca 28113988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 28114064 - 28114148
Alignment:
Q  159 caacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||| || |||||||||| ||||| |||||||||| ||| |  |||| ||||||| |||||||||||||| ||| ||||    
T  28114064 caacaattgtgttacctttgaatggggtaaattcaaacttgccaagcaacatgactccaatgttcgaccggcattctcatagttc 28114148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 49926510 - 49926270
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  49926510 cgaacgacgaaaacgtgaggagcatgttttgggagcacaacatgttccagtggatcgatatgcaggtgacgttgctgagatcaactgaagatatcatcaa 49926411  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||    
T  49926410 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaaccattgtcttcctttgaatggggtaattcaaacttgcca 49926311  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    || |||| ||||||||||||||||| |||||||||||||||    
T  49926310 aatggcaggtctccaatattcgaccagcattcccattgttc 49926270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 13973000 - 13973240
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||| | |||||||||||||    
T  13973000 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcaatatgcgggtgacattgctgagatcaattgaagatatcatcaa 13973099  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  13973100 aagtttgattccgccataagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 13973199  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  13973200 aacggcaggtctccaatattcgaccgacattcccattgttc 13973240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 38046564 - 38046324
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||    
T  38046564 cgaacgacgaaaacgtgacaagcatgttttgggagcacaacatgttccagtcgatcaatatgccggtgacgttgctgagatcaactgaagatatcatcaa 38046465  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  38046464 aagtttgattccaccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 38046365  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||| || |||||||||||||||||| ||||| ||||||||    
T  38046364 aacgacaggtctccaatattcgaccgacattctcattgttc 38046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 14173888 - 14173646
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  14173888 cgaacgacgaaaacgtgacgagcatgttttgggaggacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 14173789  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  14173788 aagtttgattccgccagaagatcgtcattaggtacggtatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 14173689  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttcat 243  Q
    ||||||| | ||| ||| ||| ||||||||| |||||||||||    
T  14173688 aacggcaggactctaatgttcaaccggcatttccattgttcat 14173646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 36909637 - 36909877
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  36909637 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 36909736  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||||| ||||||||||||||| ||    
T  36909737 aagtttgattccgccagaagatcgtcattaggtacagaatgaatgcaccttccagctacaacagttgtcttcctttgaatggggtaattcaaacttgcca 36909836  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |  |||||  |||||||| ||||||||||||||    
T  36909837 aacggcaggattccaaggttcgaccgacattcccattgttc 36909877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 49396780 - 49397020
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  49396780 cgaacaacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggattgatatgcgggtgacgttgctgagatcaactgaagatatcaacaa 49396879  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  49396880 aagtttgattccgccagaagatcgtcattaggtatggaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 49396979  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||| |||| ||||||| ||||| || ||||||||||||||    
T  49396980 aacgacatgactccaatgttcgatcgacattcccattgttc 49397020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 6435848 - 6436087
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| | ||||||||| ||||||||| | |||||||||||||    
T  6435848 cgaacgacgaaaacgtgacgagcaagttttgggagcacaacatgttccagtggatcgatatgtgagtgacgttgttgagatcaagtgaagatatcatcaa 6435947  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  6435948 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaatgaggtaattcaaacttgcca 6436047  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgtt 240  Q
    ||||||| |||||||||||||||||| || | ||||||||    
T  6436048 aacggcaggtctccaatattcgaccgacaattccattgtt 6436087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 37778158 - 37778395
Alignment:
Q  4 acgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaag 103  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37778158 acgacgaaaacgtgacgagcatgttttgggagaacaacatgttccagttgatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaag 37778257  T
Q  104 tttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    ||||||||||| ||||||| |||||| ||||||||||||||| |||||    
T  37778258 tttgattccgccagaagatcgtcattaggtaccgaatgaatgcaccttccgcctacaacaattttcttcctctgaatggggtaattcaaacttgccaaac 37778357  T
Q  204 ggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||| |  ||||||||||||||| |||||| |||||||    
T  37778358 ggcaggattccaatattcgaccgacattcctattgttc 37778395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 23342717 - 23342953
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||  |||||| ||| ||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  23342717 cgaacgacgaaaacgtgacgagcatgtttttggagcacattatgttcgagtggatcgatatgcgggtaacgttgctgagataaactgaagatatcatcaa 23342816  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||| ||    
T  23342817 aagtttgattcctccagaagatcgtcattaggtaccgaatgaatgcaccttccagctacaacaattgtcttcctttgaattgggtaattcaaacttgcca 23342916  T
Q  201 aacggcatgtctccaatattcgaccggcattcccatt 237  Q
    ||||||||| || ||||||||||||||||||||||||    
T  23342917 aacggcatgactacaatattcgaccggcattcccatt 23342953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 35185046 - 35185271
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttggg-agcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatca 99  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||| ||||| | ||||||||||||    
T  35185046 cgaacgacgaaaacgtgacgaacatgttttggggagcacggcatgttccagtggatcgatatgcaggtgacgttgctgaaatcaattgaagatatcatca 35185145  T
Q  100 aaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtc 199  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  35185146 aaagtttgattccgccagaagatcgtcattaggtgcggaatgaatgcaccttccagctacaacaattgtcttcctttgaatgaggtaattcaaacttgtc 35185245  T
Q  200 aaacggcatgtctccaatattcgacc 225  Q
    |||||||||| ||||||| |||||||    
T  35185246 aaacggcatgactccaatgttcgacc 35185271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 41780769 - 41781009
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||| || ||||||||||    
T  41780769 cgaacgacgaaaacgtgacgaatatattttgggagcacagcatgttccagtagatagatatgcaggtgacgttgctaagatcaactgaatatatcatcaa 41780868  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  41780869 aagtttgatttcgccagaagttcgtcattaggtacggaatgaatgcaccttgcagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 41780968  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | ||||||||||| ||| |||||||||||||||    
T  41780969 aacggcaggactccaatattcaaccagcattcccattgttc 41781009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 24270493 - 24270255
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  24270493 cgaacgacgaaaacgtgacgagcatgttttaggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 24270394  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||| ||    
T  24270393 aagtttgattccgccagaagatcatcaataggtaccgaatgaatgcaccttccagctacaacaattgtcttcctctgaatggggtaattcaaacttgcca 24270294  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||  ||| |  |||||| || ||||||||||||||||||||    
T  24270293 aatagcacg--tccaatgtttgaccggcattcccattgttc 24270255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 3 - 241
Target Start/End: Complemental strand, 35587057 - 35586822
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||||    
T  35587057 aacgacgaaaacgtgacgaacatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaccttgctgagatcaattgaagatatcatcaaaa 35586958  T
Q  103 gtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaa 202  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||| |||||||||||| ||||||||||||||| ||||    
T  35586957 gtttgattccgccagaagatcgtcatta-gtacggaatgaatgcacctttcaactacaacagttgt-ttcctttgaatggggtaattcaaacttgccaaa 35586860  T
Q  203 cggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    || ||   ||||||| |||||||||||||| ||||||||    
T  35586859 cgaca-aactccaatgttcgaccggcattctcattgttc 35586822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 17686491 - 17686251
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||| ||||||||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  17686491 cgaatgacgaaaacgtgaagagcatgttttgggagcacaacatcttccagtggatcgatatgcgggtgacgtagctgagatcaactgaagatatcatcaa 17686392  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||||||| ||||| || ||  ||||||||||||||| ||    
T  17686391 aagtttgattccgccagaagatcgtcattaggtatcgaatgaatgcaccttccagctacaacaattgtgttcctctggatagggtaattcaaacttgcca 17686292  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | |||||  || || ||||||||||| ||||||    
T  17686291 aacggcaggactccagcatacgtccggcattcccgttgttc 17686251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 41 - 241
Target Start/End: Complemental strand, 40533376 - 40533176
Alignment:
Q  41 catgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaat 140  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  40533376 catgttccagtggatcgatatgcgggtaacgttgccgagatcaactgaagatatcatcaaaagtttaattccgccagaagatcgtcattaggtaccgaat 40533277  T
Q  141 gaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgtt 240  Q
    |||||||||||  ||||||||||||||| ||||| | | || ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  40533276 gaatgcaccttccagctacaacaattgttttcctctaactggggtaattcaaacttgtcaaacggcatgactccaatgttcgaccggcattctcattgtt 40533177  T
Q  241 c 241  Q
    |    
T  40533176 c 40533176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 18170102 - 18170304
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  18170102 gaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttccagtagatcgatatgcgggtgacattgctgagctcaactgaagatatcatcaaa 18170201  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
     ||||||||||||||||||||||||||||||||| ||||| |||||||||  | ||| |||  |||| ||||| || ||| ||||||||||||||| |||    
T  18170202 ggtttgattccgccagaagatcgtcattaggtaccgaatgcatgcaccttccaactaaaacttttgtgttcctctggatgaggtaattcaaacttgccaa 18170301  T
Q  202 acg 204  Q
    |||    
T  18170302 acg 18170304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 13283781 - 13284017
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||| |||||| ||||||||||||||||||||| |||||||||| ||| ||||||||||| ||| |||||||||||||||||| || |||| |||||    
T  13283781 cgaacgatgaaaacatgacgagcatgttttgggagcgcagcatgttctagtggatcgatatgcaggtaacgttgctgagatcaactgaatatattatcaa 13283880  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     ||| |||||||||||||||||||| ||||||||  ||  |||||||||||  | |||||||||||||||||||||||||| |||||||||||||||| |    
T  13283881 cagtctgattccgccagaagatcgtgattaggta--ga--gaatgcaccttccaactacaacaattgtcttcctttgaatggggtaattcaaacttgtta 13283976  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    || |||| | ||| |||||||| ||| ||||||||||||||    
T  13283977 aatggcaagactcgaatattcgtccgacattcccattgttc 13284017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 17697125 - 17697322
Alignment:
Q  4 acgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaag 103  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  17697125 acgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatattatcaagag 17697224  T
Q  104 tttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaat-gtggtaattcaaacttgtcaaa 202  Q
    | |||||||||||||||||||| |||||||    || |||||||||||  | |||||||| |||||||||||| ||| | ||||||||||||||||||||    
T  17697225 tctgattccgccagaagatcgtgattaggt----aaggaatgcaccttccaactacaacagttgtcttcctttaaatgggggtaattcaaacttgtcaaa 17697320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 35576415 - 35576545
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||    
T  35576415 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccggtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 35576514  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||||||||||||    
T  35576515 aagtttgattccgccagaagatcgtcattag 35576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 21484773 - 21484573
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  21484773 cgaacgacgaaaatgtgacgagcatgtttttggagcacaacatgttccagtggatcgatatgcgagtgacgttgctgagatcaactgaagatatcatcaa 21484674  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||| | ||||||||||||||||||||| || | |  ||||  ||  | ||||||||||||||||||||||||| |||||||||||||||| ||    
T  21484673 aagtttgatttcaccagaagatcgtcattaggtagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatatggtaattcaaacttgcca 21484577  T
Q  201 aacg 204  Q
    ||||    
T  21484576 aacg 21484573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 17372803 - 17373040
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| |||| || ||||||||||||||||| ||| ||||||| ||||||||| || || |||||| ||||||||||| ||||||||||| |    
T  17372803 cgaacgacgaaaatgtgaagaacatgttttgggagcacaccatattccagtggatcgatatacgtgtaacgttgatgagatcaactgaagatatcatcga 17372902  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||| ||| ||||||||||||||||||||||| |||   ||||||||||  | |||||||||||||||||||||||||| |||||||||||||||| |    
T  17372903 aagtttaatttcgccagaagatcgtcattaggtatgga---aatgcaccttccaactacaacaattgtcttcctttgaatgaggtaattcaaacttgtta 17372999  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | ||| || ||||| ||| |||| | |||||||    
T  17373000 aacggcaggactcaaacattcgcccgacatttcaattgttc 17373040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 19160393 - 19160592
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||||| | |||||||||||||    
T  19160393 cgaacgacgaaaacgtgacgactatgttttgggaacacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaattgaagatatcatcaa 19160492  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||| |||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  19160493 aagtttgattccgccagaagattgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatggggtaattcaaacttgtca 19160589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 49427463 - 49427593
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  49427463 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 49427562  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||||||||||||    
T  49427563 aagtttgattccgccagaagatcgtcattag 49427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 39857036 - 39856817
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  39857036 cgaacgacgaaaacgtgacgatcatgttttgggagcacgacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 39856937  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||| ||||||||||||||||||| || || | |  ||||  ||  | |||||||||||||||| || || ||| || ||||||||||||| |    
T  39856936 aagtttgattctgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttactctggatggggcaattcaaacttgtta 39856840  T
Q  201 aacggcatgtctccaatattcga 223  Q
    | ||||| | |||||| ||||||    
T  39856839 atcggcaggactccaacattcga 39856817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 51269880 - 51270008
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |    
T  51269880 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctgggatcaactgaagatatcatcaaca 51269979  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      |||||||||||||||||||||||||||    
T  51269980 acttgattccgccagaagatcgtcattag 51270008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 12791403 - 12791273
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||    
T  12791403 cgaacgacgaaaacgtgacgagcatttttttggagcacaacatgttccagtggatcgatatgcgggtgacgtttttgagatcaactgaagatatcatcaa 12791304  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||||||||||||    
T  12791303 aagtttgattccgccagaagatcgtcattag 12791273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 45689195 - 45689325
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  45689195 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatggatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 45689294  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     || |||||||||||| ||||||||||||||    
T  45689295 cagcttgattccgccataagatcgtcattag 45689325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 35526307 - 35526091
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||| |||||||| ||||| |||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  35526307 cgaacgtcgaaaacgagacgaccatgttttgggagcacagaatgttgcagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 35526208  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||| |                    ||||||||||||||| ||||||||||||  |||||| |||||||| ||||||||||||||  ||    
T  35526207 aagtttgattccgcta--------------------gaatgaatgcaccttatagctacaacaaaggtcttcttttgaatggggtaattcaaactttcca 35526128  T
Q  201 aacggcatgtctccaatattcgaccggcattcccatt 237  Q
    ||||||| | |||||||||| ||||||||||||||||    
T  35526127 aacggcaggactccaatatttgaccggcattcccatt 35526091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13635427 - 13635297
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| | ||||||||| |||||||||||||    
T  13635427 cgaacgacgaaaacgtcacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcaa 13635328  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||||||||||||    
T  13635327 aagtttgattccgccagaagatcgtcattag 13635297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 48215274 - 48215404
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  48215274 cgaacgacgaaaacatgacgagcatatttttggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 48215373  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||| ||||||||    
T  48215374 aagtttgattccgccagaagatagtcattag 48215404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 39224322 - 39224197
Alignment:
Q  6 gacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtt 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| |  |    
T  39224322 gacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactaaatatatcatcaacaact 39224223  T
Q  106 tgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||||||||    
T  39224222 tgattccgccagaagatcgtcattag 39224197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 27486818 - 27486690
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  27486818 aacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccattggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaca 27486719  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      ||||||||||| |||||||||||||||    
T  27486718 acttgattccgcctgaagatcgtcattag 27486690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 42571905 - 42571777
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  42571905 gaacgacgaaaacgtgaagagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaac 42571806  T
Q  102 agtttgattccgccagaagatcgtcatta 130  Q
    |  ||||||||||||||||||||||||||    
T  42571805 aacttgattccgccagaagatcgtcatta 42571777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 44337447 - 44337319
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  44337447 aacgacgaaaacgtgacgagcatgttttgggtgcacaacatgtttcagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaca 44337348  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
     | ||||||||||||||||||||||||||    
T  44337347 atatgattccgccagaagatcgtcattag 44337319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 24363929 - 24363737
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||||| || ||||||||||| |||||| |||||| ||| ||||||||||||| | |||||| ||||| ||||| ||||||| |||||     
T  24363929 gaacgacgaaaacgtgaagaacatgttttgggggcacagtatgttctagtggatcgatatgcggttaacgttgttgagagcaactgaagatattatcaag 24363830  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgt 198  Q
    ||||||||||||  |||||||||| |||||||| |    |||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||    
T  24363829 agtttgattccgttagaagatcgtgattaggtagg----gaatgcaccttccaactacaacaattgtcttcctttgaatgaggtaattcaaacttgt 24363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 29436049 - 29436179
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||    
T  29436049 cgaacgacgaaaacgtgacgagcatgttttgggagtacagcatgttccagtggatcgatacgcgggtgacgttgctgagatcaactgaagatatcatcaa 29436148  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  ||||||  |||||||||||||||||||    
T  29436149 caacttgattaagccagaagatcgtcattag 29436179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3658549 - 3658682
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||| |||||||||||| | ||||||||||||||| ||||||| ||| |||||||||||  || |||||||||||||||||| |||||||||||||    
T  3658549 cgaacgacaaaaacgtgacgaacgtgttttgggagcacaacatgttctagtggatcgatatgcaagtaacgttgctgagatcaactgaagatatcatcaa 3658648  T
Q  101 aagtttgattccgccagaagatcgtcattaggta 134  Q
    ||||||||||||||||||||||||||||||||||    
T  3658649 aagtttgattccgccagaagatcgtcattaggta 3658682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 46180409 - 46180280
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||| ||||||||| | |||||||||||||     
T  46180409 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgtgggtaacgttgttgagatcaattgaagatatcatcaac 46180310  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || ||||||| |||||||||||||||||||    
T  46180309 agcttgattctgccagaagatcgtcattag 46180280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 29762351 - 29762221
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||| || ||||||||||    
T  29762351 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatacgggtgacgttgatgagatcaactgaaaatatcatcaa 29762252  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  ||||||||||||||||||| |||||||    
T  29762251 caacttgattccgccagaagatcatcattag 29762221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 44597777 - 44597907
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  44597777 cgaacgacgaaaacgtgatgagtatgttttgggagcacagcatgttccagtggatcgatatgtgggtgacgttgatgagatcaactgaagatatcatcaa 44597876  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  ||||||||||| |||||||||||||||    
T  44597877 caacttgattccgccggaagatcgtcattag 44597907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 18842515 - 18842735
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||||  ||||    
T  18842515 cgaacgacgaaaacgtgacgagcatgttttgggagcacggcatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatattgtcaa 18842614  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatg--------------aatgcaccttttagctacaacaattgtcttcctttgaatgtggta 186  Q
     ||| |||| ||||||||||||||  |||||||| |||  |              ||||||||||  | |||||| ||||||||||||||| ||||||||    
T  18842615 gagtctgatcccgccagaagatcgggattaggtagggatcgtgattaggtagtgaaatgcaccttccaactacaataattgtcttcctttggatgtggta 18842714  T
Q  187 attcaaacttgtcaaacggca 207  Q
    |||||| ||||| ||||||||    
T  18842715 attcaatcttgttaaacggca 18842735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 47488166 - 47488037
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||||||||| |||||||||||||||||| ||||| |||||||     
T  47488166 gaacgacgaaaacgtgacgagcatgttttgggagcacaatattttctagttgatcgatatgcgggtaacgttgctgagatcaactgaagatgtcatcaac 47488067  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||| ||||||||||||||||||||    
T  47488066 agcttgatttcgccagaagatcgtcattag 47488037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 50068388 - 50068259
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||| |||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||     
T  50068388 gaacgacaaaaatgtgacgaacatgttttgggagcacatcatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcgtcaac 50068289  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||||||||||||||||||||||    
T  50068288 agcttgattccgccagaagatcgtcattag 50068259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 48568526 - 48568404
Alignment:
Q  9 gaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttga 108  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||| |  ||||    
T  48568526 gaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacaacttga 48568427  T
Q  109 ttccgccagaagatcgtcattag 131  Q
    || ||||||||||| ||||||||    
T  48568426 tttcgccagaagattgtcattag 48568404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 27035443 - 27035318
Alignment:
Q  6 gacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtt 105  Q
    ||||||||||||||||| |||||||||||| ||| ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |  |    
T  27035443 gacgaaaacgtgacgagtatgttttgggagaacaccatattccagtggatcgatatgcgggtaacgttgctgagatcaacttaagatatcatcaacaact 27035344  T
Q  106 tgattccgccagaagatcgtcattag 131  Q
    ||||||| ||||||||||||||||||    
T  27035343 tgattccaccagaagatcgtcattag 27035318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 5765282 - 5765448
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||| ||||| ||| |||||||||||||||||| | ||||||| ||| ||||||||||||||| |||||||||||||||| | ||||||| |||||    
T  5765282 cgaacgacaaaaacttgatgagcatgttttgggagcagaacatgttctagtggatcgatatgcgggtaacgttgctgagatcaaatgaagatattatcaa 5765381  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
      || |||||||||||||||||||| |||||||| |    |||||||||||  | ||||||||||||||||    
T  5765382 ccgtctgattccgccagaagatcgtgattaggtagg----gaatgcaccttccaactacaacaattgtctt 5765448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 41875012 - 41874884
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| | |||||||||||||||| |||||||||| |  |    
T  41875012 aacgacgaaaatgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtaatgttgctgagatcaactaaagatatcattagca 41874913  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      ||||||||||||||||||||| |||||    
T  41874912 acttgattccgccagaagatcgttattag 41874884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 30309955 - 30309832
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||      |||||||||| || ||||||||||     
T  30309955 gaacgacgaaaacgtgacgagcatgttttgggagcacaggacgtttcagtggatcgatatgcgggtgac------gagatcaactgaatatatcatcaac 30309862  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||||||||||||||||||||||    
T  30309861 agcttgattccgccagaagatcgtcattag 30309832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 49263113 - 49262988
Alignment:
Q  6 gacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtt 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| ||| |||||| ||||||||||| ||||||||||||| |  |    
T  49263113 gacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatctatatgctggtaacgttgttgagatcaactgaagatatcatcaacatct 49263014  T
Q  106 tgattccgccagaagatcgtcattag 131  Q
    ||||||| | |||| ||| |||||||    
T  49263013 tgattcctctagaatatcttcattag 49262988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 29707619 - 29707544
Alignment:
Q  53 gatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcat 128  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  29707619 gatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaaaagtttgattccgctagaagatcgtcat 29707544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 16532220 - 16532080
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| |||| |||||| || |||||||| |||||| || | | ||| |||||||| || |||||||||||||||||| ||||||| |||||    
T  16532220 cgaacgacgaaaatgtgatgagcatattatgggagcagagcatgctctaatggattgatatgcgtgtaacgttgctgagatcaactgaagatattatcaa 16532121  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
     ||| ||||| ||| |||||||||| |||||||| ||||||    
T  16532120 tagtctgatttcgctagaagatcgtgattaggtatggaatg 16532080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 49598995 - 49598921
Alignment:
Q  11 aaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaac 85  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  49598995 aaacgtgacaagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaac 49598921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 16081361 - 16081527
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||| ||| ||| ||||||||||| |||||||| ||||||| |||||||||||||||| || |||||||||  ||||||| |  ||||  | ||    
T  16081361 cgaacgacgataacatgaggagcatgtttttggagcacaacatgttctagttgatcgatatgcgtgtaacgttgctgcaatcaactgagaatatactgaa 16081460  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
     ||||| |||| ||| ||||||||| |||||||| |    |||||||||||  ||||||||||||||||||    
T  16081461 gagtttaattctgccggaagatcgtgattaggtagg----gaatgcaccttccagctacaacaattgtctt 16081527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 22527735 - 22527782
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  22527735 ctacaacaattgtcttcctttgaatggggtaattcaaacttgtcaaac 22527782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 6436334 - 6436382
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  6436334 caacaattgtcttcctctgaatgtggtaattcaaacttgttaaacggca 6436382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 35185545 - 35185593
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  35185545 caacaattgtcttcctttaaatgtggtaattcaaacttgttaaacggca 35185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 35586563 - 35586515
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  35586563 caacaattgtcttcctttgaatgaggtaattcaaacttgttaaacggca 35586515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 13973461 - 13973374
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || ||||||||||| |||| |||||||||| ||| | ||||| |||||||||||||||| |||||||| |||||    
T  13973461 ctacaacaattgttttacctttgaatgtagtaaattcaaacttgccaagcagcatgactccaatattcgaccgacattcccaatgttc 13973374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 13973483 - 13973534
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  13973483 ctacaacaattgtcttcctctgaatggggtaattcaaacttgttaaacggca 13973534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 18170606 - 18170668
Alignment:
Q  136 ggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgt 198  Q
    ||||||||||||||||  | | |||||||||||||| ||||||||| ||||||||||||||||    
T  18170606 ggaatgaatgcaccttccaacaacaacaattgtctttctttgaatgaggtaattcaaacttgt 18170668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 47487701 - 47487619
Alignment:
Q  141 gaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcga 223  Q
    |||||||| ||| | |||||||||||||||| || || ||| || ||||||||||||| || ||||||| |||||||||||||    
T  47487701 gaatgcacatttcaactacaacaattgtcttactctggatggggcaattcaaacttgttaatcggcatgactccaatattcga 47487619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 49397206 - 49397252
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacgg 205  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  49397206 caacaattgtcttcctttgaatggggtaattcaaacttgttaaacgg 49397252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 24270009 - 24269961
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  24270009 caacaattgtcttcttttgaatgaggtaattcaaacttgttaaacggca 24269961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 38044836 - 38044788
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  38044836 caacaattgtcttcctctgaatggggtaattcaaacttgttaaacggca 38044788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 42571420 - 42571372
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||    
T  42571420 caacaattgtcttcctttgagtggggtaattcaaacttgttaaacggca 42571372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13148395 - 13148450
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatc 56  Q
    |||||||||||||||||| || ||||||||| ||||||| ||||||||||| ||||    
T  13148395 cgaacgacgaaaacgtgaagaacatgttttgagagcacaacatgttccagtggatc 13148450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 19262517 - 19262422
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagat 122  Q
    |||||| |||||| |||||||| |  |||| |||||   || |||||||||||||||||| |||||||  |||| |||||||||||||| ||||||    
T  19262517 ttttggcagcacatcatgttcccgaggatcaatatgtttgtcacgttgctgagatcaactgaagatattctcaacagtttgattccgcctgaagat 19262422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 40532933 - 40532882
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||| | |||| |||||||||||||||| ||||||||    
T  40532933 ctacaacaattgtcttcctctaaatgaggtaattcaaacttgttaaacggca 40532882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 18170765 - 18170827
Alignment:
Q  136 ggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgt 198  Q
    ||||||||||||||||  | |  ||||||||||||| ||||||||| ||||||||||||||||    
T  18170765 ggaatgaatgcaccttccaacagcaacaattgtctttctttgaatgaggtaattcaaacttgt 18170827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 23343202 - 23343247
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacg 204  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    
T  23343202 caacaattgttttcctttgaatggggtaattcaaacttgttaaacg 23343247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 12790917 - 12790869
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| | |||| |||||||||||||||| ||||||||    
T  12790917 caacaattgtcttcctctaaatggggtaattcaaacttgttaaacggca 12790869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 14173402 - 14173354
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| | |||| |||||||||||||||| ||||||||    
T  14173402 caacaattgtcttcctctaaatgcggtaattcaaacttgttaaacggca 14173354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 35525841 - 35525793
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||| ||||||||||||||||| ||| |||||||||||| ||||||||    
T  35525841 caacagttgtcttcctttgaatggggtgattcaaacttgttaaacggca 35525793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 14173427 - 14173514
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || ||||||||||  |||| |||||||||| ||| | ||| | ||||||| |||||||||||||||||| ||||    
T  14173427 ctacaacaattgtgttacctttgaatgcagtaaattcaaacttgccaagcagcaggactccaatgttcgaccggcattcccatagttc 14173514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 24270034 - 24270121
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||| ||||||| || |||||||||| ||||| |||||||||| ||| | ||| | ||||||||| |||||||||||||||| ||||    
T  24270034 ctacaccaattgtgttacctttgaatggggtaaattcaaacttgccaagcagcaggactccaatatacgaccggcattcccatagttc 24270121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 37778616 - 37778529
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || ||| |||||||||||| |||||||||| ||| | ||| | ||||||||| |||||| |||||||| |||||    
T  37778616 ctacaacaattgtgttacctctgaatgtggtaaattcaaacttgccaagcagcaggactccaatatacgaccgacattcccaatgttc 37778529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 14772592 - 14772522
Alignment:
Q  71 gttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
    ||||| |||||||| | ||||| |  |||| |||||||||| ||||||||||||| |||||||| ||||||    
T  14772592 gttgcagagatcaattgaagatgttctcaacagtttgattctgccagaagatcgtgattaggtagggaatg 14772522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 36910122 - 36910168
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacgg 205  Q
    ||||||| |||||||| |||||| |||||||||||||||| ||||||    
T  36910122 caacaatcgtcttcctctgaatggggtaattcaaacttgttaaacgg 36910168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 49926050 - 49926136
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| |  |||||||||||| ||| | ||| | |||||||||||||||| |||| ||| |||||    
T  49926050 ctacaacaattgtgttacctttgaatgagtaaattcaaacttgccaagcagcaggactccaatattcgaccgacatttccaatgttc 49926136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 17686002 - 17685939
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcga 223  Q
    |||||||||||||||||||||||  |||||||||| |||| |||||| | | ||||| |||||||    
T  17686002 caacaattgtcttcctttgaatg-agtaattcaaatttgttaaacggaaggactccagtattcga 17685939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 41781215 - 41781143
Alignment:
Q  170 ttcctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||| ||||| |||||||||| ||| | ||| | ||||||||| |||||| |||||||| |||||    
T  41781215 ttcctttgaatggggtaaattcaaacttgccaagcagcaggactccaatatacgaccgacattcccaatgttc 41781143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 41781225 - 41781277
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||| || |||||||| | |||||||||||||||| ||||||||    
T  41781225 ctacaacaattgtgttacctttgaacggggtaattcaaacttgttaaacggca 41781277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 49926025 - 49925977
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||| | |||| || ||||||||||||| ||||||||    
T  49926025 caacaattgtcttcctctaaatggggcaattcaaacttgttaaacggca 49925977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 13402613 - 13402853
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  13402613 cgaacgacgaaaacgtgacgagcatgttttgggagcccaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 13402712  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  13402713 aaatttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 13402812  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||| || ||||||||| |||||||||||||||||||||||    
T  13402813 aacgacaggtctccaattttcgaccggcattcccattgttc 13402853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 12396856 - 12397096
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  12396856 cgaacgacgaaaacatgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtaacgttgctgagatctactgaagatatcatcaa 12396955  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
     |  |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12396956 caacttgattccgccaaaagatcgtcattaggtacagaatgaatgcaccttttagctacaacaattgtcttcctttgaatgaggtaattcaaacttgtca 12397055  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  12397056 aacggcaggtctccaatattcgaccgacattcccattgttc 12397096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 32027757 - 32027517
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  32027757 cgaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggattgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 32027658  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||| || ||    
T  32027657 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaaacatgcca 32027558  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | ||||||| |||||||||||||||||||||||    
T  32027557 aacggcaggactccaatgttcgaccggcattcccattgttc 32027517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 30257707 - 30257468
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  30257707 gaacgacgaaaacgtgacgagcatgttttgggagcacatcatgttctagtggatcgatatgtgggtgacgttgctgagatcaattgaagatatcatcaaa 30257608  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| | |||| ||||||||||||||| |||    
T  30257607 agtttgattccgctagaagatcgtcattaggtaccgaatgaatgcaccttccagctacaacaattgtcttcctctaaatggggtaattcaaacttgccaa 30257508  T
Q  202 acggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  30257507 acggcatgactccaatgttcgaccggcattcccattgttc 30257468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 32037816 - 32037576
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  32037816 cgaatgacgaaaacgtgacgagcatgttttgggagcacaacatgttctagtggattgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 32037717  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||| ||  |||||||||||||||||||||||||||| |||||||||||| || ||    
T  32037716 aagtttgattccgccagaagatcgtcattaggtaaggaataaatgcacattaaagctacaacaattgtcttcctttgaatggggtaattcaaacatgcca 32037617  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | ||||||| |||||||||||||||||||||||    
T  32037616 aacggcaggactccaatgttcgaccggcattcccattgttc 32037576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 34803025 - 34802786
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||||| |||||||||  ||||||||| |||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  34803025 cgaacgacgaaaacgtgatgagcatgttcagggagcacaacatgttccagtaaatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 34802926  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||| | ||  |||||||| ||||||||||||||||||||||||||||||||||| ||    
T  34802925 aagtttgatttcgccaaaagatcgtcattaggtaaggaatgaatgcgctttcgagctacaaaaattgtcttcctttgaatgtggtaattcaaacttgcca 34802826  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgtt 240  Q
    ||||||| | ||| ||| ||||||||||||| ||||||||    
T  34802825 aacggcaggactctaatgttcgaccggcattaccattgtt 34802786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 35021284 - 35021126
Alignment:
Q  83 aacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgt 182  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35021284 aactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaagtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgg 35021185  T
Q  183 ggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35021184 ggtaattcaaacttgtcaaacggcaggtctccaatattcgaccggcattcccattgttc 35021126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 801246 - 801447
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  801246 gaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaa 801345  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    |||||||||||||||||||||||||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| |||||||||||||||  ||    
T  801346 agtttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatgaggtaattcaaacttgcgaa 801442  T
Q  202 acggc 206  Q
    |||||    
T  801443 acggc 801447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6205564 - 6205763
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  6205564 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 6205663  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| |||| |||||||||||| ||||||||||||||||||    
T  6205664 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtattcctttgaatgaggtaattcaaacttgtca 6205760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27640260 - 27640459
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  27640260 cgaacgacgaaaacgtgacgaccatgttttggaagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 27640359  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| ||||||||||||||||| ||||||||||||||||||    
T  27640360 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtcttcctttgaatgaggtaattcaaacttgtca 27640456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11692531 - 11692730
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  11692531 cgaacgacgaaaacgtgacgaacatgttttggaagcacaacatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 11692630  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| |||| |||||||||||| ||||||||||||||||||    
T  11692631 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtattcctttgaatgaggtaattcaaacttgtca 11692727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 2 - 206
Target Start/End: Original strand, 14115118 - 14115318
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||| |||||| ||||||||||| |||||||||||||     
T  14115118 gaacgacgaaaacgtgacgagcatgttctgggagcacaacatgttccagtggatcaatatgcgggtaacgttgttgagatcaactgaagatatcatcaag 14115217  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaa 201  Q
    ||| |||||| |||||||||| || |||||||| |    |||||||||||  | ||||||||||||||||||||| |||  ||||||||||||||| |||    
T  14115218 agtctgattctgccagaagatagtgattaggtagg----gaatgcaccttccaactacaacaattgtcttcctttaaatagggtaattcaaacttgccaa 14115313  T
Q  202 acggc 206  Q
     ||||    
T  14115314 gcggc 14115318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 29108222 - 29108350
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |    
T  29108222 aacgacgaaaacgtgaagagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatgatcaaca 29108321  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      |||||||||||||||||||||||||||    
T  29108322 acttgattccgccagaagatcgtcattag 29108350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 29066635 - 29066763
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| ||||| |    
T  29066635 aacgacgaaaacgtgaagagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgatgttgctgagatcaactgaagatatgatcaaca 29066734  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      ||||||||||||| |||||||||||||    
T  29066735 acttgattccgccagtagatcgtcattag 29066763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 29075648 - 29075776
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| ||||| |    
T  29075648 aacgacgaaaacgtgaagagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgatgttgctgagatcaactgaagatatgatcaaca 29075747  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      ||||||||||||| |||||||||||||    
T  29075748 acttgattccgccagcagatcgtcattag 29075776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 29110620 - 29110748
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| ||||| |    
T  29110620 aacgacgaaaacgtgaagagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgatgttgctgagatcaactgaagatatgatcaaca 29110719  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
      ||||||||||||| |||||||||||||    
T  29110720 acttgattccgccagcagatcgtcattag 29110748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 35058863 - 35058734
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  35058863 gaacgacgaaaacgttacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaactaaagatatcatcaac 35058764  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    |  || ||||| | ||||||||||||||||    
T  35058763 atcttaattccacaagaagatcgtcattag 35058734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 203
Target Start/End: Complemental strand, 24021168 - 24021027
Alignment:
Q  59 tatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagcta 158  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||| || || | |  ||||  ||  | |||    
T  24021168 tatgcgggtgaagttgcttagatcaacttaagatatcatcaaaagtttgattccgccataaaatcgtcattagttagggtaag-gtgca--ttccaacta 24021072  T
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  24021071 caacaattgtcttcctttgaatggggtaattcaaacttgtcaaac 24021027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22305876 - 22305980
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| | ||||||||| |||||||||||||    
T  22305876 cgaacgacgaaaacgtcacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcaa 22305975  T
Q  101 aagtt 105  Q
    |||||    
T  22305976 aagtt 22305980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 2192535 - 2192672
Alignment:
Q  59 tatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagcta 158  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||||| || || | |  ||||  ||  | |||    
T  2192535 tatgcgggtgaagttgcttagatcaacttaagatatcatcaaaattttgattccgccataaaatcgtcattagttagggtaag-gtgca--ttccaacta 2192631  T
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtc 199  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  2192632 caacaattgtcttcctttgaatggggtaattcaaacttgtc 2192672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 3765865 - 3765786
Alignment:
Q  53 gatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagttt-gattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||||| |||||||    
T  3765865 gatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttaaattccaccagaagatcatcattag 3765786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 4495119 - 4495223
Alignment:
Q  137 gaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccat 236  Q
    |||||||||||||||  |||||||||||||||||||||||||||| |||||||||| || | |||||||   | ||||||| |||||||| |||| ||||    
T  4495119 gaatgaatgcaccttccagctacaacaattgtcttcctttgaatggggtaattcaatctggccaaacggttggactccaatgttcgaccgacatttccat 4495218  T
Q  237 tgttc 241  Q
    |||||    
T  4495219 tgttc 4495223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 30257212 - 30257127
Alignment:
Q  118 aagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    |||||||||  |||||||||||||||||||||||  | |||||||||||||||| |||| |||| |||||||||||||||| ||||    
T  30257212 aagatcgtcggtaggtacggaatgaatgcaccttcaaactacaacaattgtctttctttaaatgaggtaattcaaacttgttaaac 30257127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 30257228 - 30257334
Alignment:
Q  137 gaatgaatgcaccttttagctacaacaattgtctt-cctttgaatgtggt-aattcaaacttgtcaaacggcatgtctccaatattcgaccggcattccc 234  Q
    ||||||||||||||| |||||||||||||||| ||  ||||||||  ||| |||||||||||| ||| | ||||| ||||||| ||||| ||||||||||    
T  30257228 gaatgaatgcaccttctagctacaacaattgtgttatctttgaatagggtaaattcaaacttgccaagcagcatgactccaatgttcgatcggcattccc 30257327  T
Q  235 attgttc 241  Q
    || ||||    
T  30257328 atagttc 30257334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 12397317 - 12397236
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattccca 235  Q
    |||||||||||||||| |||||||||| ||||| |||||||||| ||| | ||| | |||||||||||||||||||||||||    
T  12397317 ctacaacaattgtcttacctttgaatggggtaaattcaaacttgccaagcagcaggactccaatattcgaccggcattccca 12397236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 13403356 - 13403269
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    |||||||||||||||| |||||||||| ||||| |||||||||||||| | ||| | ||||||||||||||| |||||| || |||||    
T  13403356 ctacaacaattgtcttacctttgaatggggtaaattcaaacttgtcaagcagcaggactccaatattcgaccagcattctcaatgttc 13403269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 35020905 - 35020992
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| |||||||||| ||| | ||| | ||||||||||||||||||||||||| |||||    
T  35020905 ctacaacaattgtgttacctttgaatggggtaaattcaaacttgacaagcagcaggactccaatattcgaccggcattcccaatgttc 35020992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 17465396 - 17465331
Alignment:
Q  69 acgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggta 134  Q
    ||||||| |||||||||| |||||||  |||| ||||||||||||||| |||||||| ||||||||    
T  17465396 acgttgcagagatcaactgaagatattctcaacagtttgattccgccaaaagatcgtgattaggta 17465331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 32027271 - 32027223
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  32027271 caacaactgtcttcctttgaatggggtaattcaaacttgttaaacggca 32027223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 32037330 - 32037282
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  32037330 caacaactgtcttcctttgaatggggtaattcaaacttgttaaacggca 32037282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 34134801 - 34134897
Alignment:
Q  71 gttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtct 170  Q
    ||||| |||||||||| |||| ||  |||| ||||||||||||| | |||||||| |||||||| |    |||||||||||| | |||||||||||||||    
T  34134801 gttgcagagatcaactgaagaaattctcaacagtttgattccgctaaaagatcgtgattaggtagg----gaatgcacctttcaactacaacaattgtct 34134896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 32027296 - 32027383
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||| | || |||||||||| ||||| |||||||||||||| |  |||| ||||||| |||||||| ||||||||| ||||    
T  32027296 ctacaacaattatgttacctttgaatgaggtaaattcaaacttgtcaagcaacatgactccaatgttcgaccgacattcccatagttc 32027383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 32037355 - 32037442
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||| | || |||||||||| ||||| |||||||||||||| |  |||| ||||||| |||||||| ||||||||| ||||    
T  32037355 ctacaacaattatgttacctttgaatgaggtaaattcaaacttgtcaagcaacatgactccaatgttcgaccgacattcccatagttc 32037442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 28051473 - 28051577
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatca-tcaaaagtttgattccgccagaagatcgt 125  Q
    |||||| ||||||||||| | | | |||||||||||   || ||||||| ||||||||||  ||||||   |||| ||||||||||||| ||||||||||    
T  28051473 ttttggcagcacagcatggttctggtgatcgatatgtttgtcacgttgcagagatcaactggagatatttctcaatagtttgattccgctagaagatcgt 28051572  T
Q  126 catta 130  Q
     ||||    
T  28051573 gatta 28051577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 35020880 - 35020832
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||  ||||| || ||||||||||||| ||||||||    
T  35020880 caacaattgtcttcctcagaatggggcaattcaaacttgttaaacggca 35020832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 7e-98; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 4724206 - 4723966
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  4724206 cgaacgacaaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 4724107  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||| ||    
T  4724106 aagtttgattccgccagaagatcgtcattaggtaccaaatgaatgcaccttgcagctacaacaattgtcttcctctgaatggggtaattcaaacttgcca 4724007  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||| | |||||||||||||||| ||||| ||||||||    
T  4724006 aacggcaggactccaatattcgaccgacattctcattgttc 4723966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 1400434 - 1400194
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  1400434 cgaacgacgaaaacgtgacgaccatgttttgggagcacatcatgttccagtggatccatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 1400335  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  1400334 aagtttgattccgccagaagatcgtcattaggtacggagtgaatgcaccttccagctacaacaattgtcttccttttaatggggtaattcaaacttgcca 1400235  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||  | ||||| |||||||||||| ||||||||||||||    
T  1400234 aacgataggtctctaatattcgaccgacattcccattgttc 1400194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 35565356 - 35565586
Alignment:
Q  11 aaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgatt 110  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  35565356 aaacgtgacgagcatgttttgggagcacaacatgttctagtggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcagaagtttgatt 35565455  T
Q  111 ccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatgt 210  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| |||||| ||||     
T  35565456 ccgccagaagatcgtcattaggtgcggaatgaatgcacctttcagctacaacaattatcttcctttgaatggggtaattcaaacttgccaaacgacatga 35565555  T
Q  211 ctccaatattcgaccggcattcccattgttc 241  Q
    || |||| |||||||||||||||||||||||    
T  35565556 cttcaatgttcgaccggcattcccattgttc 35565586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 1694864 - 1695104
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||| |||||||||||||    
T  1694864 cgaacaacgaaaacgtgacgagcatgttttgggagcacagcatgtttcactggaacgatatgcgggtgacgttgttgagatcaactgaagatatcatcaa 1694963  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||| |||||  ||||||||||||||  ||    
T  1694964 aagtttgattccgccagaagatcgtcattaggtaccgaatgaatgcaccttccagctacaacaattgtcttcctctgaattgggtaattcaaactttcca 1695063  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||| | ||||| ||||| |||||||||||||||||    
T  1695064 aacggcatgacaccaatgttcgatcggcattcccattgttc 1695104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 18308335 - 18308575
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  18308335 cgaacgacgaaaacatgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgatgttgctgagatcaactgaagatatcatcaa 18308434  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    || |||||||||||||| |||| | ||||||||| ||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||| ||    
T  18308435 aaatttgattccgccagtagattgacattaggtatggaatgaatgcaccttccacctacaacaattgtcttcctttgaatggggtaattcaaacttgcca 18308534  T
Q  201 aacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||| | |||||||||||||||||| ||||| ||||||||    
T  18308535 aacgggaggtctccaatattcgaccgacattctcattgttc 18308575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7361 - 7162
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  7361 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 7262  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    ||||||||||||||||||||||||||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| ||||||||||| ||||||    
T  7261 aagtttgattccgccagaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatggggtaattcaaatttgtca 7165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 27661509 - 27661310
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  27661509 cgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgcttagatcaactaaagatatcatcaa 27661410  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||| |||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  27661409 aagtttgattccgccagaagattgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatggggtaattcaaacttgtca 27661313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 28881066 - 28881265
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  28881066 cgaacgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 28881165  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||||||||||| ||||||||| ||||||||||||||||||    
T  28881166 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacaattgtctttctttgaatggggtaattcaaacttgtca 28881262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 6793518 - 6793351
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||| |||  |||||||||||| ||| |||||||||||||| | |||||||||||||    
T  6793518 cgaacgacgaaaatgtgacgagcatgttttgggagcacaacatgttctagtgaatcgatatgcggatgaggttgctgagatcaattgaagatatcatcaa 6793419  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgt 168  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  6793418 aagtttgattcagccagaagatcgtcattaggtactgaatgaatgcaccttccagctacaacaattgt 6793351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 8576273 - 8576074
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  8576273 cgaacgaagaaaacgtgacgaccatgttttgggagcacaacatgttccggtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 8576174  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||||||||| |||||||| || || | |  ||||  ||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  8576173 aagtttgattccgccagaagattgtcattagttagggtaag-gtgca--ttccaactacaacaattgtcttcctttgaatggggtaattcaaacttgtca 8576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19036806 - 19036607
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  19036806 cgaacgacgaaaacgtgacgaccatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 19036707  T
Q  101 aagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtca 200  Q
    |||||||||||||||| |||||||||||||| || || | |  ||||  ||  | |||||||| |||| |||||||||||| ||||||||||||||||||    
T  19036706 aagtttgattccgccacaagatcgtcattagttagggtaag-gtgca--ttccaactacaacatttgtattcctttgaatgaggtaattcaaacttgtca 19036610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 11346785 - 11346914
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| ||||||||| ||||||||||||||    
T  11346785 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgagtgaagttgcttagatcaactgaagatatcatcaaa 11346884  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||||||||||||    
T  11346885 agtttgattccgccagaagatcgtcattag 11346914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8538029 - 8538159
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  8538029 cgaacgacgaaaacatgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaa 8538128  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||||||||||||    
T  8538129 aagtttgattccgccagaagatcgtcattag 8538159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 3601416 - 3601546
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||   |||||||||||||||||||||||||||||||| |||||||||||||    
T  3601416 cgaacgacgaaaacgtgacgagcatgttttaagagcacaacatgttccagtgtttcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaa 3601515  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||| |||||||||||||||||    
T  3601516 aagtttgattccgtcagaagatcgtcattag 3601546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11027852 - 11027982
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||| ||||||||||| |    
T  11027852 cgaacgacgaaaacgtcacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcga 11027951  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    |||||||||||||||||||||||||||||||    
T  11027952 aagtttgattccgccagaagatcgtcattag 11027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19400438 - 19400568
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  19400438 cgaacgacgaaaatgtgacgagcatgttttgggagcacagcatgttccagtggatcgatatgcgggtgacgttggtgagatcaactgaagatatcatcaa 19400537  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  ||||||||||||||| |||||||||||    
T  19400538 caacttgattccgccagaatatcgtcattag 19400568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30709673 - 30709803
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||| |||||||||||||    
T  30709673 cgaatgacgaaaacgtgacgaccatgttttgggagcacagcatgttccagtggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcaa 30709772  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||| |||||||||||||||    
T  30709773 aagtttgattccgccggaagatcgtcattag 30709803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 36350436 - 36350279
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||         |||| ||||||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  36350436 gaacgacgaaaacgtgacgagcatg---------cacaacatgttccagtggatcgatatgtaggtgacgttgctgagatcaactgaagatatcatcaaa 36350346  T
Q  102 agtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgt 168  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  36350345 agtttgattccaccagaagatcgtcattaggtaccgaatgaatgcaccttccagctacaacaattgt 36350279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 33370729 - 33370862
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  33370729 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgctgagatcaactgaagatattatcaa 33370828  T
Q  101 aagtttgattccgccagaagatcgtcattaggta 134  Q
     ||| |||||||||||||||||| | ||||||||    
T  33370829 cagtctgattccgccagaagatcatgattaggta 33370862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 541767 - 541637
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  541767 cgaacgacgaaaacgggacgagcatgttttgggagcacatcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactggagatatcatcaa 541668  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     |  |||||| ||||||||||||||||||||    
T  541667 caacttgatttcgccagaagatcgtcattag 541637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1971440 - 1971570
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||||    
T  1971440 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcaatatgcgggtaacgttgctgagatcaactgaagatatcatcaa 1971539  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     || ||||||||||||||| ||| |||||||    
T  1971540 cagcttgattccgccagaaaatcatcattag 1971570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 38854233 - 38854363
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| | ||||||||| |||||||||||||    
T  38854233 cgaacgacgaaaacgtcacgaccatgttttgggagcacatcatgttccagtggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcaa 38854332  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||||||||||| |||||||||    
T  38854333 aagtttgattccgccagaagaccgtcattag 38854363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 40009604 - 40009733
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| |||| |||||| ||||||||||| |||| ||||||||     
T  40009604 gaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttacagtggatcgatatgtgggtaacgttgttgagatcaactgaagacatcatcaac 40009703  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||| | ||||||||||||||||    
T  40009704 agcttgattccacaagaagatcgtcattag 40009733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35927569 - 35927470
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  35927569 cgaacgacgaaaacgtgacgaacatgttttgggagcacatcatctttcagtggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaa 35927470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 7082334 - 7082426
Alignment:
Q  39 agcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattag 131  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||||||||    
T  7082334 agcatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattag 7082426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17366868 - 17366738
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||| ||||| | ||||||||||||||||| ||||||| ||| ||| |||||||||||  ||||| ||||||||||| ||||||| |||||    
T  17366868 cgaacgacgaaaatgtgacaaacatgttttgggagcacaacatgttctagtggattgatatgcgggtaccgttgttgagatcaactaaagatattatcaa 17366769  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     ||| |||||| ||||||| ||||| |||||    
T  17366768 gagtctgattctgccagaatatcgtgattag 17366738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 22283704 - 22283845
Alignment:
Q  59 tatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagcta 158  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| || |||||| |||| || |||   || |  | ||  | |||    
T  22283704 tatgcgggtgaagttgcttagatcaacttaagatatcatcaaaagtttgattccaccataaaatcgtccttagtta-gga--taaggtgcattccaacta 22283800  T
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  22283801 caacaattgtcttcctttgaatggggtaattcaaacttgtcaaac 22283845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3169678 - 3169760
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatca 83  Q
    ||||||||||||||||||||||||| ||||  ||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  3169678 cgaacgacgaaaacgtgacgagcatattttaagagcacaacatgttccagtggatcggtatgcgggtgacgttgctgagatca 3169760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 7082792 - 7082881
Alignment:
Q  118 aagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||| ||||||| |||||||||||||||  | || ||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  7082792 aagatcgtcagtaggtacagaatgaatgcaccttccaactgcaacaattgtcttcctttgaacgtggtaattcaaacttgttaaacggca 7082881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 17195423 - 17195351
Alignment:
Q  69 acgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatg 141  Q
    |||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||| |||||||| ||||||    
T  17195423 acgttgctgagatcaactaaagatattatcaacaatttgattccgccagaagatcgtgattaggtagggaatg 17195351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 1171725 - 1171796
Alignment:
Q  136 ggaatgaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||  | || ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  1171725 ggaatgaatgcaccttccaactgcaacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 1171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 18920835 - 18920975
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtc 126  Q
    |||||| |||||| |||| | | | |||||||||||   || ||||||| |||||||||| |||||||  |||| ||||||||||||||||||||||||     
T  18920835 ttttggcagcacaacatggttccgatgatcgatatgtttgtcacgttgcagagatcaactgaagatattctcaacagtttgattccgccagaagatcgtg 18920934  T
Q  127 attaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
    |||||||| |    |||||||||||  | ||||||||||||||||    
T  18920935 attaggtagg----gaatgcaccttccaactacaacaattgtctt 18920975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 12742818 - 12742880
Alignment:
Q  72 ttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggta 134  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  12742818 ttgctgagatcaactgaagatatcatcaacagtctgattccgccagaagatcgtgattaggta 12742880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 4723723 - 4723672
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  4723723 ctacaacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 4723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 33371169 - 33371235
Alignment:
Q  141 gaatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||| | ||||||||||||||||||||| |||  |||||||||||||||| ||||||||    
T  33371169 gaatgcacctttcaactacaacaattgtcttcctttaaattaggtaattcaaacttgttaaacggca 33371235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 25498643 - 25498691
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  25498643 caacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 25498691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 34683571 - 34683523
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  34683571 caacaattgtcttcctttgaatggggtaattcaaacttgttaaacggca 34683523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 35565832 - 35565880
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  35565832 caacaattgtcttcctttgaatgaggtaattcaaacttgttaaacggca 35565880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 12805636 - 12805698
Alignment:
Q  72 ttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggta 134  Q
    ||||||||||||||| ||||||||||||| ||| |||||  ||||||||||||| ||||||||    
T  12805636 ttgctgagatcaactgaagatatcatcaacagtctgattatgccagaagatcgtgattaggta 12805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 6793122 - 6793074
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  6793122 caacaattgtcttcctttgaatgagataattcaaacttgttaaacggca 6793074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 3458940 - 3458995
Alignment:
Q  76 tgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattag 131  Q
    ||||||||| | ||||||||||||| || |||||||||| ||||||||||||||||    
T  3458940 tgagatcaattgaagatatcatcaacagcttgattccgctagaagatcgtcattag 3458995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 25360690 - 25360549
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgtt-gctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgt 125  Q
    |||||| |||||| |||||||  || ||||||||||   || ||||| |||||||||  || ||||| |  |||| |||||||||||| |||||||||||    
T  25360690 ttttggcagcacaacatgttctcgtggatcgatatgtttgtcacgtttgctgagatcgcctgaagatgttttcaacagtttgattccgtcagaagatcgt 25360591  T
Q  126 cattaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
     ||||||||  ||  |||||||||||| | ||||||||||||||||    
T  25360590 gattaggta--ga--gaatgcacctttcaactacaacaattgtctt 25360549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 25498539 - 25498456
Alignment:
Q  159 caacaattgtcttcctttgaatgtggt-aattcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||||||||||||| ||| ||||||||||||  || | |||   |||||||||||||||| |||||||| |||||    
T  25498539 caacaattgtcttcctttgaatgaggtaaattcaaacttgcaaagcagcaatactccaatattcgaccgacattcccaatgttc 25498456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 36349996 - 36350083
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| || |||||||||| ||||| |||||||||| ||| | ||||| ||||||| |||||||| ||||||||| ||||    
T  36349996 ctacaacaattgtgttacctttgaatggggtaaattcaaacttgccaagcagcatgactccaatgttcgaccgacattcccatagttc 36350083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 2599313 - 2599379
Alignment:
Q  20 gagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaact 86  Q
    |||||||||||||||||||| |||||| | || |||||||||| | || ||||||||||||| ||||    
T  2599313 gagcatgttttgggagcacaacatgttaccgtggatcgatatgtgtgtaacgttgctgagattaact 2599379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 1399976 - 1400060
Alignment:
Q  156 ctacaacaattgtcttc-ctttgaatgtggtaa-ttcaaacttgtcaaacggcatgtctccaatattcgaccggcattcccattgttc 241  Q
    ||||||||||||| ||  ||||||||| ||||| ||||||||||||||   ||||| |||||||||||||||| |||||||| |||||    
T  1399976 ctacaacaattgtgttaactttgaatggggtaaattcaaacttgtcaa---gcatgactccaatattcgaccgacattcccaatgttc 1400060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 1399951 - 1399903
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||| ||||||| |||||| |||||||||||||||| ||||||||    
T  1399951 caacaattttcttcctctgaatggggtaattcaaacttgttaaacggca 1399903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 18308817 - 18308864
Alignment:
Q  156 ctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    |||||||||||||||||||  ||||| |||||||||||||||| ||||    
T  18308817 ctacaacaattgtcttcctcagaatgaggtaattcaaacttgttaaac 18308864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 36312051 - 36311911
Alignment:
Q  27 ttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtc 126  Q
    |||||| | |||| |||||||| ||||||| || ||   || ||||||||||||||  || ||||| |  |||| ||||| |||| |||||||||||||     
T  36312051 ttttggcaccacatcatgttcccgttgatcaatgtgtttgtcacgttgctgagatcgcctgaagatcttctcaatagtttaattctgccagaagatcgtg 36311952  T
Q  127 attaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
    |||||||| |    |||||||||||  | ||||||||||||||||    
T  36311951 attaggtagg----gaatgcaccttccaactacaacaattgtctt 36311911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 20196639 - 20196689
Alignment:
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaacggcatg 209  Q
    ||||||||||||| || |||||| ||||||||||| |||| ||||||||||    
T  20196639 caacaattgtctttctctgaatggggtaattcaaatttgttaaacggcatg 20196689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 10398006 - 10398067
Alignment:
Q  142 aatgcaccttttagctacaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    ||||||||||  | |||||  ||||||||||||||| ||| |||||||||||||||| ||||    
T  10398006 aatgcaccttccaactacacaaattgtcttcctttggatggggtaattcaaacttgttaaac 10398067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 11347272 - 11347316
Alignment:
Q  163 aattgtcttcctttgaatgtggtaattcaaacttgtcaaacggca 207  Q
    |||||||||||| |||||| || ||||||||||||| ||||||||    
T  11347272 aattgtcttcctctgaatggggcaattcaaacttgttaaacggca 11347316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 18308795 - 18308715
Alignment:
Q  156 ctacaacaattgtctt-cctttgaatgtggtaattcaaacttgtcaaacggcatgtctccaatattcgaccggcattccca 235  Q
    |||||||||||||||| |||||||||| |  ||||||||| || ||| |  || | |||||||||||||||| ||||||||    
T  18308795 ctacaacaattgtcttacctttgaatgggtaaattcaaacatgccaagcaacaagactccaatattcgaccgacattccca 18308715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 40011844 - 40011896
Alignment:
Q  156 ctacaacaattgtctt-cctttgaa-tgtggtaattcaaacttgtcaaacggc 206  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||    
T  40011844 ctacaacaattgtcttacctctgaaatggggtaattcaaacttgtcaaacggc 40011896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 1870 - 1998
Alignment:
Q  3 aacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaa 102  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1870 aacgacgaaaacgtgacggacatgttttgggagcacaacatgttccagtggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaa 1969  T
Q  103 gtttgattccgccagaagatcgtcattag 131  Q
    |||||||| ||||| ||||||||||||||    
T  1970 gtttgatttcgccataagatcgtcattag 1998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2345 - 2475
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||| | |||||||||||||    
T  2345 cgaacgacgaaaacgtgacgagcatgttttgggagcacaacatgttccagtggatcgatatgcgggtaacgttgatgagatcaattgaagatatcatcaa 2444  T
Q  101 aagtttgattccgccagaagatcgtcattag 131  Q
     || |||||||||||| ||||||||||||||    
T  2445 cagcttgattccgccaaaagatcgtcattag 2475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 18045 - 17916
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaa 101  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||  ||| ||||||||||||||| |||||||||||||||||| |||||||||||||     
T  18045 gaacgacgaaaacgtgatgagcatgttttgggagcacaacatgttatagtggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaac 17946  T
Q  102 agtttgattccgccagaagatcgtcattag 131  Q
    || |||||||||||||||||||||||||||    
T  17945 agcttgattccgccagaagatcgtcattag 17916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 85462 - 85603
Alignment:
Q  59 tatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagcta 158  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||| || || | |  ||||  ||  | |||    
T  85462 tatgcgggtgaagttgcttagatcaacttaagatatcatcaaaagtttgattcagccataaaatcgtcattagttagggtaag-gtgca--ttccaacta 85558  T
Q  159 caacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  85559 caacaattgtcttcctttgaatggggtaattcaaacttgtcaaac 85603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 72 - 204
Target Start/End: Original strand, 64098 - 64227
Alignment:
Q  72 ttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttttagctacaacaattgtctt 171  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||    || | || ||  | ||||||||||||||||    
T  64098 ttgctgagatcaactgaagatatcatcaaaagtttgattccaccagaagatcgtcattaggtaggg---taaggtacattccaactacaacaattgtctt 64194  T
Q  172 cctttgaatgtggtaattcaaacttgtcaaacg 204  Q
    ||||||||||  |||||||||||||| ||||||    
T  64195 cctttgaatgaagtaattcaaacttgccaaacg 64227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 64054 - 64091
Alignment:
Q  2 gaacgacgaaaacgtgacgagcatgttttgggagcaca 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  64054 gaacgacgaaaacgtgacgagcatgttttgggagcaca 64091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 14604 - 14745
Alignment:
Q  59 tatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacgg-aatgaatgcaccttttagct 157  Q
    |||| |||||| |||||| ||||||||||||||| ||||||||||| |||| |||||| ||||||||| |||| || || || |  ||||  ||  | ||    
T  14604 tatgtgggtgaagttgcttagatcaacttaagatttcatcaaaagtatgataccgccataagatcgtcgttagttagggtaacg--tgca--ttccaact 14699  T
Q  158 acaacaattgtcttcctttgaatgtggtaattcaaacttgtcaaac 203  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  14700 acaacaattgtcttcctttgaatggggtaattcaaacttgtcaaac 14745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 24983 - 25115
Alignment:
Q  1 cgaacgacgaaaacgtgacgagcatgttttgggagcacagcatgttccagttgatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaa 100  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||||||| ||| |||| || ||||| | || ||||| ||||||||| ||||||| | |||    
T  24983 cgaacaacgaaaatgtgacgagcatgttttgggagcacaacatgttctagtggatctatttgcggataacattgctaagatcaactgaagatatta-caa 25081  T
Q  101 aagtttgattccgccagaagatcgtcattaggta 134  Q
     ||| ||||| |||||  ||||||| ||||||||    
T  25082 gagtctgattgcgccaatagatcgtgattaggta 25115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University