View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11572_low_5 (Length: 383)
Name: NF11572_low_5
Description: NF11572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11572_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 283 - 371
Target Start/End: Original strand, 17026959 - 17027045
Alignment:
| Q |
283 |
tcgtctttctcgtcctcaaaaccatctagggtgaatatttctccatcaaccacactctccaataaatgtagtcccttggtgttcatctc |
371 |
Q |
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| T |
17026959 |
tcgtctttctcgtcctcaaaaccatctagggtgaatatttctccatcaaccaca--ctccaataaatgtagtccattggtgttcatctc |
17027045 |
T |
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