View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11574_low_8 (Length: 522)

Name: NF11574_low_8
Description: NF11574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11574_low_8
NF11574_low_8
[»] chr6 (10 HSPs)
chr6 (190-507)||(24631136-24631458)
chr6 (3-143)||(24631499-24631639)
chr6 (416-497)||(14030615-14030696)
chr6 (416-504)||(10100242-10100330)
chr6 (416-504)||(20428021-20428109)
chr6 (416-504)||(5258535-5258623)
chr6 (416-500)||(9706585-9706669)
chr6 (417-504)||(607969-608056)
chr6 (420-504)||(2689469-2689553)
chr6 (416-504)||(5631627-5631715)
[»] chr4 (16 HSPs)
chr4 (7-131)||(37744343-37744467)
chr4 (11-84)||(24558340-24558413)
chr4 (160-218)||(21318691-21318749)
chr4 (210-289)||(37744156-37744237)
chr4 (419-500)||(43433730-43433811)
chr4 (416-500)||(31960203-31960287)
chr4 (3-48)||(37750335-37750380)
chr4 (416-500)||(436038-436122)
chr4 (416-504)||(1211775-1211863)
chr4 (416-500)||(33227018-33227102)
chr4 (416-500)||(48174482-48174566)
chr4 (246-297)||(24558139-24558190)
chr4 (416-453)||(1777451-1777488)
chr4 (416-453)||(23906737-23906774)
chr4 (416-453)||(48622963-48623000)
chr4 (416-480)||(47265611-47265675)
[»] chr8 (8 HSPs)
chr8 (3-131)||(6224041-6224169)
chr8 (210-389)||(6224271-6224457)
chr8 (416-500)||(36565630-36565714)
chr8 (416-504)||(42854389-42854477)
chr8 (416-504)||(18124985-18125072)
chr8 (416-500)||(36395342-36395426)
chr8 (161-217)||(6224194-6224250)
chr8 (416-500)||(39946666-39946750)
[»] chr7 (16 HSPs)
chr7 (5-125)||(26607841-26607961)
chr7 (6-129)||(26620375-26620499)
chr7 (5-125)||(26618407-26618527)
chr7 (416-504)||(43281485-43281573)
chr7 (416-504)||(7272848-7272936)
chr7 (416-504)||(38606814-38606902)
chr7 (416-500)||(34869229-34869313)
chr7 (416-500)||(35906590-35906674)
chr7 (416-500)||(36651803-36651887)
chr7 (416-500)||(12841664-12841748)
chr7 (420-500)||(46356240-46356320)
chr7 (416-453)||(31005032-31005069)
chr7 (416-453)||(37616725-37616762)
chr7 (416-453)||(39906811-39906848)
chr7 (416-500)||(33072763-33072847)
chr7 (416-500)||(33350195-33350279)
[»] chr3 (6 HSPs)
chr3 (3-131)||(25338405-25338533)
chr3 (416-453)||(51448145-51448182)
chr3 (416-504)||(5168637-5168725)
chr3 (416-453)||(28245246-28245283)
chr3 (416-453)||(52138609-52138646)
chr3 (416-452)||(47542148-47542184)
[»] chr5 (8 HSPs)
chr5 (9-92)||(31571599-31571682)
chr5 (210-297)||(31571700-31571789)
chr5 (416-496)||(1275074-1275154)
chr5 (416-500)||(2075863-2075947)
chr5 (416-500)||(12492776-12492860)
chr5 (415-504)||(16347763-16347852)
chr5 (416-453)||(20318796-20318833)
chr5 (416-504)||(3301658-3301746)
[»] chr1 (16 HSPs)
chr1 (3-86)||(39367443-39367526)
chr1 (416-504)||(696078-696166)
chr1 (417-504)||(15085744-15085831)
chr1 (3-65)||(18308908-18308970)
chr1 (243-297)||(39367181-39367235)
chr1 (416-500)||(32083134-32083218)
chr1 (416-500)||(43240770-43240854)
chr1 (416-500)||(51601867-51601951)
chr1 (4-55)||(17113615-17113666)
chr1 (422-504)||(37463252-37463334)
chr1 (348-410)||(39367073-39367135)
chr1 (416-453)||(1210554-1210591)
chr1 (260-297)||(12190718-12190755)
chr1 (416-453)||(22089903-22089940)
chr1 (416-453)||(51441201-51441238)
chr1 (416-500)||(30202519-30202603)
[»] chr2 (14 HSPs)
chr2 (3-86)||(27150555-27150638)
chr2 (3-87)||(7703154-7703235)
chr2 (9-98)||(24479873-24479962)
chr2 (243-297)||(27150296-27150350)
chr2 (416-504)||(41197613-41197701)
chr2 (416-500)||(11992495-11992579)
chr2 (416-504)||(12734515-12734602)
chr2 (416-504)||(41763426-41763514)
chr2 (176-218)||(27150416-27150458)
chr2 (416-453)||(452058-452095)
chr2 (243-276)||(7703439-7703472)
chr2 (416-500)||(2610337-2610421)
chr2 (416-500)||(8180589-8180673)
chr2 (166-218)||(24480014-24480066)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-98)||(445570-445666)
[»] scaffold0018 (1 HSPs)
scaffold0018 (416-500)||(31277-31361)
[»] scaffold0570 (1 HSPs)
scaffold0570 (416-453)||(2706-2743)


Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 190 - 507
Target Start/End: Complemental strand, 24631458 - 24631136
Alignment:
Q  190 catacaagatactcaaatagtgatcaaatcaaacaccctgttgagcttaacagaaca-caagaatcatgttaaactcttgttcaacaagaacaacactca 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| ||||    
T  24631458 catacaagatactcaaatagtgatcaaatcaaacaccctgttgagcttaacagaacaacaaggatcatattaaactcttgttcaacaagaacaactctca 24631359  T
Q  289 cccataagattttttacaagttaactggaaagacaca----ttactagccacaaaggggtcatccttagcattaaccccctacactatgtcttttccaca 384  Q
    | ||||||||||| ||||| |||||||||||||||||    |||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||    
T  24631358 ctcataagattttctacaaattaactggaaagacacactcattacgagccacaaaggggtcatccttaacattaaccccctacactacgtcttttccgca 24631259  T
Q  385 tagttagcgattgaaatgttttaccaaattttaccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagg 484  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||    
T  24631258 tagttggcgattggcatgttttaccaaattttaccacttaagttgaaatgaaagttatatcggacaacaatcaaacttgcaatgttgtatgctacagagg 24631159  T
Q  485 gttgggtggttaagagccaaaac 507  Q
    |||||||| ||||||||||||||    
T  24631158 gttgggtgattaagagccaaaac 24631136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 24631639 - 24631499
Alignment:
Q  3 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatctgatatttctc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24631639 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatctgatatttctc 24631540  T
Q  103 tattccatgaaagtaaaaccaatcctacctgaaccttagca 143  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24631539 tattccatgaaagtaaaaccaatcctacctgaaccttagca 24631499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 497
Target Start/End: Original strand, 14030615 - 14030696
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaa 497  Q
    ||||||||||| ||||||||||||| ||||||||| || ||||||  ||||||| ||||| ||| ||| |||||| ||||||    
T  14030615 taccacttaagctgaaatgaaagttctatcggacaacagtcaaactagcaatgttgtatggtacggagtgttgggcggttaa 14030696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 10100330 - 10100242
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||||||||| ||||||| |||||||||| | ||| |||  | |||| ||||| ||| ||| |||||| |||||||||||||    
T  10100330 taccacttaagttgaaaggaaagttctatcggacagtagtcagaccgacgatgttgtatggtacggagtgttgggaggttaagagccaa 10100242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 20428109 - 20428021
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| ||||| ||||||| ||| |||||||| ||||||    ||||| ||||  ||||||| ||||||||||||||||||||    
T  20428109 taccacttaagctgaaaggaaagttctattggacagcagtcaaactaaaaatgttgtatagtacagagtgttgggtggttaagagccaa 20428021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 5258623 - 5258535
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| ||||| ||||||| ||||||||| || ||| ||| ||||||| ||||| ||| ||| |||||| ||  |||||||||    
T  5258623 taccacttaagctgaaaggaaagttctatcggacaacagtcagaccggcaatgttgtatggtacggagtgttgggcggcgaagagccaa 5258535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 9706585 - 9706669
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||| ||||| ||||||| ||||| |||||| ||| ||| ||||||| ||||| |||  || ||| ||||||||||||    
T  9706585 taccacttaagctgaaaggaaagttctatcgaacagcagtcagaccggcaatgttgtatggtacgaagtgttaggtggttaagag 9706669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 504
Target Start/End: Original strand, 607969 - 608056
Alignment:
Q  417 accacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    |||||||||  |||||  |||||| |||||||||||| ||| ||| ||||||| ||||  ||| ||| |||||| |||||||||||||    
T  607969 accacttaaactgaaagaaaagttctatcggacagcagtcagaccggcaatgttgtattgtacggagtgttgggcggttaagagccaa 608056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 504
Target Start/End: Original strand, 2689469 - 2689553
Alignment:
Q  420 acttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||||| |||||||  ||||||||||| ||| |||  | |||| ||||| ||| ||| |||||| |||||| ||||||    
T  2689469 acttaagttgaaaggaaagttcaatcggacagcagtcagaccgtcgatgttgtatggtacggagtgttgggcggttaacagccaa 2689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 5631627 - 5631715
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| ||||| |||| || ||||||||| || ||| |||  |||||| ||||| ||  ||| |||||| |||||||||||||    
T  5631627 taccacttaagctgaaaggaaaattctatcggacaacagtcagaccgacaatgttgtatggtatggagtgttgggcggttaagagccaa 5631715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 7e-38; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 37744467 - 37744343
Alignment:
Q  7 gcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatctgatatttctctatt 106  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| |||||||||| ||||||||||||| | |||  | ||||    
T  37744467 gcagaatttacctttactaaagatgaagcaagaaacaaaatccaattgatttaagtgttgctactttctgaagagaggaaggatctcacattgttatatt 37744368  T
Q  107 ccatgaaagtaaaaccaatcctacc 131  Q
    |||||||||||||| ||||||||||    
T  37744367 ccatgaaagtaaaatcaatcctacc 37744343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 24558413 - 24558340
Alignment:
Q  11 aatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagagg 84  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||| ||||||||| |||||||||| |||||    
T  24558413 aatttacctttactaaaggtgaagcaagcaacaaaatcctattaatttaagtgttgctactttctgaatagagg 24558340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 21318691 - 21318749
Alignment:
Q  160 agctaaaatcataataaccatacaacggaacatacaagatactcaaatagtgatcaaat 218  Q
    ||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  21318691 agctagaatcacaataaccatacaacagaacatacaagctactcaaatagtgatcaaat 21318749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 37744237 - 37744156
Alignment:
Q  210 tgatcaaatcaaacacc-ctgttgagcttaacagaaca-caagaatcatgttaaactcttgttcaacaagaacaacactcac 289  Q
    ||||||||||||||| | |||||||||| ||||||||| |||| ||| ||||||||||||||||||  ||||||||||||||    
T  37744237 tgatcaaatcaaacatctctgttgagctgaacagaacaacaaggatcgtgttaaactcttgttcaaacagaacaacactcac 37744156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 419 - 500
Target Start/End: Original strand, 43433730 - 43433811
Alignment:
Q  419 cacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    |||||||||||||| ||||||| |||||||||||||||| ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  43433730 cacttaagttgaaaggaaagttctatcggacagcaatcagaccggcgttgttgtatggtacggagtgttgggcggttaagag 43433811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 31960287 - 31960203
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  31960287 taccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttgggcggttaagag 31960203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 37750380 - 37750335
Alignment:
Q  3 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatc 48  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||    
T  37750380 tggagcagaatttacctttagtaaagatgaagcaagtaactaaatc 37750335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 436038 - 436122
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||  ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  436038 taccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagag 436122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 1211863 - 1211775
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||||||||| ||||||| ||||||||| || ||| ||| |  |||| || || ||||||| |||||  |||||||||||||    
T  1211863 taccacttaagttgaaaggaaagttctatcggacaacagtcagaccggtgatgttgtgtggtacagagtgttggacggttaagagccaa 1211775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 33227018 - 33227102
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||  ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  33227018 taccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagag 33227102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 48174566 - 48174482
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| ||| ||  ||| ||||| ||| ||| |||||  |||||||||    
T  48174566 taccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttggacggttaagag 48174482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 24558190 - 24558139
Alignment:
Q  246 acaagaatcatgttaaactcttgttcaacaagaacaacactcacccataaga 297  Q
    ||||| ||| |||||| |||||||||||||| |||||||||||| |||||||    
T  24558190 acaaggatcgtgttaagctcttgttcaacaataacaacactcactcataaga 24558139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 1777488 - 1777451
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  1777488 taccacttaagttgaaaggaaagttctatcggacagca 1777451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 23906774 - 23906737
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  23906774 taccacttaagttgaaaggaaagttctatcggacagca 23906737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 48623000 - 48622963
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  48623000 taccacttaagttgaaaggaaagttctatcggacagca 48622963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 480
Target Start/End: Complemental strand, 47265675 - 47265611
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctaca 480  Q
    ||||||||||||||||||||||||| |||| |||| || ||| ||| || |||| ||||| ||||    
T  47265675 taccacttaagttgaaatgaaagttctatctgacaacagtcagaccagcgatgttgtatggtaca 47265611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 6224041 - 6224169
Alignment:
Q  3 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatctgatatttctc 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||| |||| ||||||| ||||  | |||  |     
T  6224041 tggagcagaatttacctttactaaagatgaagcaagcaacaaaatcatattgatttaagtgttgctactttttgaacagaggaaagatcccacattgtta 6224140  T
Q  103 tattccatgaaagtaaaaccaatcctacc 131  Q
    |||||||||||||||||||||||||||||    
T  6224141 tattccatgaaagtaaaaccaatcctacc 6224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 210 - 389
Target Start/End: Original strand, 6224271 - 6224457
Alignment:
Q  210 tgatcaaatcaaacacc-ctgttgagcttaacagaaca-caagaatcatgttaaactcttgttcaacaagaacaacactcaccca-taagattttttaca 306  Q
    ||||||||||||||||| |||||||||| ||||||||| |||  ||| |||||||||||||||||||||||||||||||||| || ||||| ||| ||||    
T  6224271 tgatcaaatcaaacacctctgttgagctgaacagaacaacaatgatcttgttaaactcttgttcaacaagaacaacactcactcaataagagtttctaca 6224370  T
Q  307 agttaactggaaagacaca----ttactagccacaaaggggtcatccttagcattaaccccctacactatgtcttttccacatagtt 389  Q
    | |||| | |||||| |||    || | |||||| ||| | ||| ||||||||||||||||| ||  ||||| |||||| |||||||    
T  6224371 aattaagttgaaagatacactcattgcaagccacgaagcgttcacccttagcattaacccccgacggtatgtgttttccccatagtt 6224457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 36565714 - 36565630
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  36565714 taccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttgggcggttaagag 36565630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 42854477 - 42854389
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| ||||| |||| || |||||||||||| ||| |||  |||||| ||||| ||| ||| |||||| |||||||||||||    
T  42854477 taccacttaagctgaaaggaaaattctatcggacagcagtcagaccgacaatgttgtatggtacggagtgttgggcggttaagagccaa 42854389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 18124985 - 18125072
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||| ||||||| ||||||| ||||||||| || ||| |||  |||||| ||||| ||| ||| |||||| |||||||||||||    
T  18124985 taccactta-gttgaaaggaaagttctatcggacaacagtcagaccaacaatgttgtatggtacggagtgttgggcggttaagagccaa 18125072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 36395426 - 36395342
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||  ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  36395426 taccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagag 36395342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 6224194 - 6224250
Alignment:
Q  161 gctaaaatcataataaccatacaacggaacatacaagatactcaaatagtgatcaaa 217  Q
    |||| ||||| |||||||| |||||  |||||||||| ||| |||||||||||||||    
T  6224194 gctagaatcacaataaccacacaacataacatacaagctacccaaatagtgatcaaa 6224250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 39946666 - 39946750
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    |||||||||| |||||| ||||||| |||||||||||| |||  || || |||| ||||| ||| ||  |||||| |||||||||    
T  39946666 taccacttaaattgaaaggaaagttctatcggacagcagtcaggccggcgatgttgtatggtacggaatgttgggcggttaagag 39946750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 26607961 - 26607841
Alignment:
Q  5 gagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatctgatatttctcta 104  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||| |||| | ||| ||||||||||||||| |||  | ||    
T  26607961 gagcagaatttacctctactaaagatgaagcaagcaacaaaatcctattgatttaagtgttgctacttccagaacagaggaaggatctgacattgttata 26607862  T
Q  105 ttccatgaaagtaaaaccaat 125  Q
    |||||||||||||||||||||    
T  26607861 ttccatgaaagtaaaaccaat 26607841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 26620499 - 26620375
Alignment:
Q  6 agcagaatttacctttactaaagat-gaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatctgatatttctcta 104  Q
    |||| ||||||||| |||||||||| ||| |||| |||||||||||||||||| ||||||||| ||||| |||| ||||||||||||||| |||| | ||    
T  26620499 agcataatttacctctactaaagattgaaacaagcaacaaaatcctattgatttaagtgttgctactttatgaacagaggaaggatctgacatttttata 26620400  T
Q  105 ttccatgaaagtaaaaccaatccta 129  Q
    |||||||||||||||||||||||||    
T  26620399 ttccatgaaagtaaaaccaatccta 26620375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 26618527 - 26618407
Alignment:
Q  5 gagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatctgatatttctcta 104  Q
    ||||| || |||||| | ||| |||||||||||| |||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||  | ||    
T  26618527 gagcataacttacctctgctagagatgaagcaagcaacaaaatcctattgatttaagtgttgctactttctgaacagaggaaggatctgacattgttata 26618428  T
Q  105 ttccatgaaagtaaaaccaat 125  Q
    |||||||||||||||||||||    
T  26618427 ttccatgaaagtaaaaccaat 26618407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 43281485 - 43281573
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| ||||| ||||||| |||||||||||| ||||||| ||||||| ||||| ||||||| |||||| |||||||||||||    
T  43281485 taccacttaagctgaaaggaaagttctatcggacagcagtcaaaccggcaatgttgtatggtacagagtgttgggcggttaagagccaa 43281573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 7272848 - 7272936
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||||||| | ||||||| |||||| ||||| |||||||  |||||| ||||| ||||||| |||||| |||| ||||||||    
T  7272848 taccacttaagttgagaggaaagttgtatcggtcagcagtcaaaccgacaatgttgtatgatacagagtgttgggcggttgagagccaa 7272936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 38606814 - 38606902
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| ||||| ||||||| ||||||||| || ||| ||| ||||||| ||||| ||| ||| |||||| |||||||||||||    
T  38606814 taccacttaagctgaaaggaaagttctatcggacaacagtcagaccggcaatgttgtatggtacggagtgttgggcggttaagagccaa 38606902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 34869229 - 34869313
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  34869229 taccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttgggcggttaagag 34869313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 35906674 - 35906590
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||  ||| ||  ||| ||||| ||| ||| ||||||||||||||||    
T  35906674 taccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatgatacggagtgttgggtggttaagag 35906590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 36651803 - 36651887
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||||||  ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  36651803 taccacttaagttgaaaggaaagttctatcggacagcaatccgaccggcgttgttgtatggtacggagtgttgggcggttaagag 36651887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 12841748 - 12841664
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||  ||| ||  ||| ||||| ||| ||| ||||||||||||||||    
T  12841748 taccacttaagttgaaaggaaagttctatcgtacagcagtctgaccggcgttgttgtatggtacggagtgttgggtggttaagag 12841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 500
Target Start/End: Complemental strand, 46356320 - 46356240
Alignment:
Q  420 acttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||| ||||||| |||||||||| | ||| ||| ||| ||| ||||| ||| ||| |||||| |||||||||    
T  46356320 acttaagttgaaaggaaagttctatcggacagtagtcagaccggcattgttgtatggtacggagtgttgggcggttaagag 46356240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 31005032 - 31005069
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  31005032 taccacttaagttgaaaggaaagttctatcggacagca 31005069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 37616725 - 37616762
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  37616725 taccacttaagttgaaaggaaagttatatcggccagca 37616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 39906848 - 39906811
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  39906848 taccacttaagttgaaaggaaagttctatcggacagca 39906811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 33072763 - 33072847
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||| ||| ||||||| ||||||||| || | | ||| ||  ||| ||||| ||||||| |||||| |||||||||    
T  33072763 taccacttaagttaaaaggaaagttctatcggacaacagttagaccggcgttgttgtatggtacagagtgttgggcggttaagag 33072847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 33350279 - 33350195
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||| | ||||||| |||||||||||| ||  ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  33350279 taccacttaagttgacaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagag 33350195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 25338533 - 25338405
Alignment:
Q  3 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatctgatatttctc 102  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| || ||||||| |||   |||||  |     
T  25338533 tggagtagaatttacctttactaaagatgaagcaagcaacaaaatcctattgatttaagtgttgctactttctaaacagaggaaagattcaatattgtta 25338434  T
Q  103 tattccatgaaagtaaaaccaatcctacc 131  Q
    ||||||||||||||||||| ||| |||||    
T  25338433 tattccatgaaagtaaaacgaattctacc 25338405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 51448182 - 51448145
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  51448182 taccacttaagttgaaaggaaagttatatcggacagca 51448145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 5168637 - 5168725
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| ||||| |||| || ||||||||| || ||| ||| ||||||| ||||| ||| ||| | |||| |||||||||||||    
T  5168637 taccacttaagctgaaaggaaaattctatcggacaacagtcagaccggcaatgttgtatggtacggagtgctgggcggttaagagccaa 5168725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 28245246 - 28245283
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  28245246 taccacttaagttgaaaggaaagttctatcggacagca 28245283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 52138609 - 52138646
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  52138609 taccacttaagttgaaaggaaagttctatcggacagca 52138646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 452
Target Start/End: Complemental strand, 47542184 - 47542148
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagc 452  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  47542184 taccacttaagttgaaaggaaagttctatcggacagc 47542148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 31571599 - 31571682
Alignment:
Q  9 agaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatct 92  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  31571599 agaacttacctttactaaagatgaatcaaacaacaaaatcctattgatttaagtgttgccactttctgaacagaggaaggatct 31571682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 210 - 297
Target Start/End: Original strand, 31571700 - 31571789
Alignment:
Q  210 tgatcaaatcaaacaccct-gttgagcttaacagaaca-caagaatcatgttaaactcttgttcaacaagaacaacactcacccataaga 297  Q
    ||||||||||||||| | | |||||||| ||||||| | |||| ||||||||||||||||||||||||| |||||||||||| |||||||    
T  31571700 tgatcaaatcaaacatctttgttgagctgaacagaataacaaggatcatgttaaactcttgttcaacaataacaacactcactcataaga 31571789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 1275074 - 1275154
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggtta 496  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| ||| ||  ||| ||||| ||| ||| |||||| |||||    
T  1275074 taccacttaagttgaaaggaaagttctatcggacagcagtcagaccggcgttgttgtatggtacggagtgttgggcggtta 1275154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 2075947 - 2075863
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||  ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  2075947 taccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatggtacggagtgttgggcggttaagag 2075863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 12492860 - 12492776
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||  ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  12492860 taccacttaagttgaaaggaaagttctatcggacagcagtccgaccggctttgttgtatggtacggagtgttgggcggttaagag 12492776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 504
Target Start/End: Complemental strand, 16347852 - 16347763
Alignment:
Q  415 ttaccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    |||||||||||||||||| ||||||| ||||||||| || ||| |||  | || | ||||| ||| ||| |||| | |||||||||||||    
T  16347852 ttaccacttaagttgaaaggaaagttctatcggacaacactcagaccgacgatattgtatggtacggagtgttgagcggttaagagccaa 16347763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 20318796 - 20318833
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  20318796 taccacttaagttgaaaggaaagttatatcggatagca 20318833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 3301658 - 3301746
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    |||||||||| |||||| ||||||| |||||||||| | ||| ||   |||||| ||||| |||  || |||||| |||||||||||||    
T  3301658 taccacttaaattgaaaggaaagttctatcggacagtagtcagactgacaatgttgtatggtacgaagtgttgggcggttaagagccaa 3301746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 39367526 - 39367443
Alignment:
Q  3 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaa 86  Q
    ||||||||||||| ||||||||||||||||||||   |||||||||||||||||| ||||||||| |||||||||| |||||||    
T  39367526 tggagcagaattttcctttactaaagatgaagcagccaacaaaatcctattgatttaagtgttgctactttctgaacagaggaa 39367443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 696078 - 696166
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| ||||| ||||||| |||||||||||| ||| ||| ||||||| ||||| ||| ||| ||||||||||||||||||||    
T  696078 taccacttaagctgaaaggaaagttctatcggacagcagtcagaccggcaatgttgtatggtacggagtgttgggtggttaagagccaa 696166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 504
Target Start/End: Original strand, 15085744 - 15085831
Alignment:
Q  417 accacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    |||||||||| ||||| ||||||| |||| ||||||| ||||||| ||||||| ||||| ||| ||| |||||| |||||||||||||    
T  15085744 accacttaagctgaaaggaaagttctatcagacagcagtcaaaccggcaatgttgtatggtacggagtgttgggcggttaagagccaa 15085831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 18308908 - 18308970
Alignment:
Q  3 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgtt 65  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||| |||||||  |||||||    
T  18308908 tggagcagaatttacctttactagagatgaagcaagcagcaaaatcatattgataaaagtgtt 18308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 39367235 - 39367181
Alignment:
Q  243 aacacaagaatcatgttaaactcttgttcaacaagaacaacactcacccataaga 297  Q
    |||||||||||||||||||||  || |||||||| |||||||||||| |||||||    
T  39367235 aacacaagaatcatgttaaacattttttcaacaataacaacactcactcataaga 39367181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 32083218 - 32083134
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||| ||||| ||||||| |||| |||| || ||| |||  |||||| ||||| ||||||| |||||| |||||||||    
T  32083218 taccacttaagctgaaaggaaagttctatcagacaacagtcagaccgacaatgttgtatggtacagagtgttgggcggttaagag 32083134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 43240854 - 43240770
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| |||||||||||| ||  ||| ||  ||| ||||| ||| ||| |||||| |||||||||    
T  43240854 taccacttaagttgaaaggaaagttctatcggacagcagtccgaccggcgttgttgtatgatacggagtgttgggaggttaagag 43240770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 51601867 - 51601951
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    |||| |||||||||||||||||||| |||||||||| | ||  ||| ||  ||| ||||| ||| ||| ||||||||||||||||    
T  51601867 taccccttaagttgaaatgaaagttctatcggacagtagtccgaccggcgttgttgtatggtacggagtgttgggtggttaagag 51601951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 17113615 - 17113666
Alignment:
Q  4 ggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattga 55  Q
    |||||||||||||| ||||||||   ||||||||| ||||||||||||||||    
T  17113615 ggagcagaatttacatttactaatagtgaagcaagcaacaaaatcctattga 17113666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 504
Target Start/End: Complemental strand, 37463334 - 37463252
Alignment:
Q  422 ttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| |||| || |||| |||| || ||| ||  ||||||| ||||| ||||||| ||||||||||||||| ||||    
T  37463334 ttaagttgaaaggaaaattctatcagacaacagtcagactagcaatgttgtatggtacagagtgttgggtggttaagaaccaa 37463252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 39367135 - 39367073
Alignment:
Q  348 ccttagcattaaccccctacactatgtcttttccacatagttagcgattgaaatgttttacca 410  Q
    ||||| ||||||||||||||  |||||||||||||||||||| || ||||  |||||| ||||    
T  39367135 ccttaccattaaccccctaccatatgtcttttccacatagttggcaattggcatgtttgacca 39367073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 1210554 - 1210591
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  1210554 taccacttaagttgaaaggaaagttctatcggacagca 1210591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 12190718 - 12190755
Alignment:
Q  260 aaactcttgttcaacaagaacaacactcacccataaga 297  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  12190718 aaactcttgttcaacaataacaacactcactcataaga 12190755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 22089903 - 22089940
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  22089903 taccacttaagttgaaaggaaagttctatcggacagca 22089940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 51441238 - 51441201
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  51441238 taccacttaagttgaaaggaaagttctatcggacagca 51441201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 30202603 - 30202519
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| ||||||||| || ||  ||| ||  ||| || || ||||||| |||||| |||||||||    
T  30202603 taccacttaagttgaaaggaaagttctatcggacaacagtccgaccggcgttgttgtgtggtacagagtgttgggcggttaagag 30202519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 27150638 - 27150555
Alignment:
Q  3 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaa 86  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||  | |||||||| |||||||    
T  27150638 tggagcaaaatttacctttactaaagatgaaccaagcaacaaaatcctattgatttaagtgttgttaatttctgaacagaggaa 27150555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 7703154 - 7703235
Alignment:
Q  3 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaag 87  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||| || |||| | |||||||||| ||| ||||    
T  7703154 tggagcagaatttacctttactaaagatgaagcaag---caaaatcctattgatttaaatgtttctactttctgaagagaagaag 7703235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 24479873 - 24479962
Alignment:
Q  9 agaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttgcaactttctgaaaagaggaaggatctgatatt 98  Q
    |||||||| ||| ||||||||||||||||| |||  |||| |||||||| |  |||||| |||||||||| |||||||||||||||||||    
T  24479873 agaatttagcttaactaaagatgaagcaagcaacttaatcatattgatttatatgttgctactttctgaatagaggaaggatctgatatt 24479962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 27150350 - 27150296
Alignment:
Q  243 aacacaagaatcatgttaaactcttgttcaacaagaacaacactcacccataaga 297  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||| |||||||    
T  27150350 aacacaaggatcatgttaaactcttgttcaacaataacaacactcactcataaga 27150296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 41197701 - 41197613
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| ||||| ||||||| ||||| ||| || ||| ||| ||||||| ||||| |||| || |||||| |||||||||||||    
T  41197701 taccacttaagctgaaaggaaagttctatcgaacaacagtcagaccagcaatgttgtatggtacaaagtgttgggcggttaagagccaa 41197613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 11992579 - 11992495
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||| ||||| ||||||| |||||||||||| ||  ||| ||||||| ||||| ||| ||| | |||| |||||||||    
T  11992579 taccacttaagctgaaaggaaagttctatcggacagcagtctgaccggcaatgttgtatggtacggagtgatgggcggttaagag 11992495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 504
Target Start/End: Original strand, 12734515 - 12734602
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||||||||| ||||||| |||| |||| || |||||||  | |||| ||||| ||||||| |||||| |||| ||||||||    
T  12734515 taccacttaagttgaaaggaaagttctatc-gacaacagtcaaaccatcgatgttgtatggtacagagtgttgggcggtttagagccaa 12734602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 41763514 - 41763426
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagagccaa 504  Q
    ||||||||||| | ||| ||||||| ||||| | | |||||| ||| ||||||| ||||| ||||||| |||||| |||||||| ||||    
T  41763514 taccacttaagctaaaaggaaagttctatcgaagaacaatcagaccggcaatgttgtatggtacagagtgttgggcggttaagaaccaa 41763426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 27150458 - 27150416
Alignment:
Q  176 accatacaacggaacatacaagatactcaaatagtgatcaaat 218  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||    
T  27150458 accacacaacagaacatacaagctactcaaatagtgatcaaat 27150416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 452095 - 452058
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  452095 taccacttaagttgaaaggaaagttctatcggacagca 452058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 276
Target Start/End: Original strand, 7703439 - 7703472
Alignment:
Q  243 aacacaagaatcatgttaaactcttgttcaacaa 276  Q
    |||||||| |||||||||||||||||||||||||    
T  7703439 aacacaaggatcatgttaaactcttgttcaacaa 7703472  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 2610337 - 2610421
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| ||||||||| || ||| ||  ||  ||| ||||| ||| ||| |||||| |||||||||    
T  2610337 taccacttaagttgaaaggaaagttctatcggacaacagtcagactggcgttgttgtatggtacggagtgttgggcggttaagag 2610421  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 8180589 - 8180673
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| ||||||||| || ||| ||| ||  ||| ||||| ||| ||| |||||  |||||||||    
T  8180589 taccacttaagttgaaaggaaagttctatcggacatcagtcagaccagcgttgttgtatggtacggagtgttggacggttaagag 8180673  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 24480014 - 24480066
Alignment:
Q  166 aatcataataaccatacaacggaacatacaagatactcaaatagtgatcaaat 218  Q
    ||||| |||||||| |||||  |||||||||| |||| |||||||||||||||    
T  24480014 aatcacaataaccacacaacataacatacaagctacttaaatagtgatcaaat 24480066  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 445666 - 445570
Alignment:
Q  3 tggagcagaatttacctttactaaagatgaagcaaggaacaaaatcctattgattcaagtgttg-caactttctgaaaagaggaaggatctgatatt 98  Q
    ||||||| ||||||| |||||||||||| ||||||  ||||||||| |||||||| |||||||| ||  |||||||  ||||||||||| |||||||    
T  445666 tggagcaaaatttacttttactaaagataaagcaaacaacaaaatcttattgatttaagtgttgccatttttctgagcagaggaaggatatgatatt 445570  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 31277 - 31361
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagcaatcaaacccgcaatgtagtatgctacagagggttgggtggttaagag 500  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||| ||| ||  ||| ||| | ||| ||| ||||||||||||||||    
T  31277 taccacttaagttgaaaggaaagttctatcgaacagcagtcagaccggcggtgttgtacggtacggagtgttgggtggttaagag 31361  T

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Target: scaffold0570 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 2743 - 2706
Alignment:
Q  416 taccacttaagttgaaatgaaagttatatcggacagca 453  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  2743 taccacttaagttgaaaggaaagttctatcggacagca 2706  T

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