View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11575_high_32 (Length: 314)
Name: NF11575_high_32
Description: NF11575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11575_high_32 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 81 - 304
Target Start/End: Complemental strand, 7709432 - 7709209
Alignment:
| Q |
81 |
tggaagaattgagccaaaaatttacctttgatgttgcctagaataaaaaggctgatgaaatatggtagaaagcaaaacaagctccatattgaagaccaga |
180 |
Q |
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| T |
7709432 |
tggaagaattgagccaaaaatttacctttgatgttgcctagaataaaaaggctgatgaaatatggtagaaagcaaaacaagctccatattgaagaccaga |
7709333 |
T |
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| Q |
181 |
aatcatgaggaggttccattacacttaataatactaaaaactcaaatttcacttcattatgaataaccatagatgtagaaaaagaacaaaaggatcattc |
280 |
Q |
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| T |
7709332 |
aatcatgaggaggttccattacactaaataatactaaaaactcaaatttcacttcattatgaataaccatagatgtagaaaaagaacagaaggatcattc |
7709233 |
T |
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| Q |
281 |
ataatccccattttcttccctttg |
304 |
Q |
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|||||||||||||||||||||||| |
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| T |
7709232 |
ataatccccattttcttccctttg |
7709209 |
T |
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