View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11575_high_37 (Length: 283)
Name: NF11575_high_37
Description: NF11575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11575_high_37 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 36634874 - 36634694
Alignment:
| Q |
15 |
aataattgaaattaaaaccacccaaatttgtatagtaagtaataactataacaccaataaataaaaatcaattaaaaggaaaaccatttgaaagggtgat |
114 |
Q |
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| T |
36634874 |
aataattgaaattaaaaccacccaagtttgtatagtaagtaataactataacaccaataaataaaaatcaattaaaaggaaaaccatttgaaagggtgat |
36634775 |
T |
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| Q |
115 |
taataagaaagcaggaagggaaattcaaaagctccaaaatatgaaagacttaacaataatatccatcaaagatagtatatt |
195 |
Q |
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| T |
36634774 |
taataagaaagcaagaagggaaattcaaaagctccaaaataagaaagacttaacaataatatccatcaaagatagtatatt |
36634694 |
T |
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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 268
Target Start/End: Complemental strand, 36634648 - 36634620
Alignment:
| Q |
240 |
tatgaatataccatttctagagtgaaagg |
268 |
Q |
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| T |
36634648 |
tatgaatataccatttctagagtgaaagg |
36634620 |
T |
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