View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11575_high_59 (Length: 230)
Name: NF11575_high_59
Description: NF11575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11575_high_59 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 9 - 230
Target Start/End: Original strand, 10760774 - 10760995
Alignment:
| Q |
9 |
aatttcttatttaaatctgatgttctatcagttgctcaagagattataagatgcaaaacacctatcagcattttaacacaagtccaatcccaaagtcaag |
108 |
Q |
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| T |
10760774 |
aatttcttatttaaatctgatgttctatcagttgctcaagagataataagatgcaaaacacctatcagcatattaacacaagtccaatcccaaagccaag |
10760873 |
T |
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| Q |
109 |
cttatgttaaagtctctattcaagttgaaggcaagaaaatatttccctccatagcaaggcctgagcttatttcatcacagaaaccagcaaggcgaagaaa |
208 |
Q |
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| T |
10760874 |
cttatgttaaagtctctattcaagttgaaggcaagaaaatatttccctccatagcaaggcctgagcttatttcatcacagaaaccagcaaggcgaagaaa |
10760973 |
T |
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| Q |
209 |
accgcacgagttgtgcatttgc |
230 |
Q |
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|||||||||| ||||||||||| |
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| T |
10760974 |
accgcacgagctgtgcatttgc |
10760995 |
T |
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