View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11575_low_60 (Length: 230)
Name: NF11575_low_60
Description: NF11575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11575_low_60 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10761287 - 10761502
Alignment:
| Q |
1 |
catgttatttggcactattcaaagccgagagacaataatgtggctgaaataagaacatcgtgttatagttttgggccttcaggcctaaaggaagtgccac |
100 |
Q |
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| T |
10761287 |
catgttatttggcactattcaaagtcgagagacaataatgtggctgaaataagaacatcgtgttatagttttgggccttcaggcctaaaggaagtgccac |
10761386 |
T |
|
| Q |
101 |
gtgaaggagtcatgatggggtacacgtgtcgtttggcagaacgcgagagacataagagtattgtgagacctgatgcacttaatcaaacactcattaatgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10761387 |
gtgaaggagtcatgatggggtacacgtgtcgtttggcagaacgcgagagacataagagtattgtgagacctgatgcacttaatcaaacactcattaatgt |
10761486 |
T |
|
| Q |
201 |
ggtacaccactttcat |
216 |
Q |
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|||||||||||||||| |
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| T |
10761487 |
ggtacaccactttcat |
10761502 |
T |
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