View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11577_low_33 (Length: 268)
Name: NF11577_low_33
Description: NF11577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11577_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 41010149 - 41010399
Alignment:
| Q |
1 |
aaagttgcaagatgacctattaataaattaactagaactagattttgatctaaaactatgaacgaaattatttttctagcttttccacttgatgcttccc |
100 |
Q |
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| T |
41010149 |
aaagttgcaagatgacctattaataaattaactagaactagattttgatctaaaactatgaacgaaattatttttctagcttttccacttgatgcttccc |
41010248 |
T |
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| Q |
101 |
tttacctattaataaattaactccagaaaggaacaacgttctcaaacttattatagcagggcagttatttgtattaaacttttcagacaaaacaaaccgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41010249 |
tttacctattaataaattaactccagaaaggaacaacgttctcaaacttattatagcagggcagttatttgtattaaacttttcagacaaaacaaaccgt |
41010348 |
T |
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| Q |
201 |
agagtgcatgcatggtttgtcacgacaaagaagagtttgtttctacaaaag |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
41010349 |
agagtgcatgcatggtttgtcacgacaaagaagagtttatttctacaaaag |
41010399 |
T |
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