View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11579_high_30 (Length: 206)
Name: NF11579_high_30
Description: NF11579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11579_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 2907615 - 2907814
Alignment:
| Q |
1 |
caaattaaattcaatttaattcatgtcatatcgagacagcaattcggattcatgatgatcaactgaatcaaattcaataaatttgccattataaaatatg |
100 |
Q |
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| T |
2907615 |
caaattaaattcattttaattcatgtcatatcgagacagcaattcggattcatgatgatcaactgaatcaaattcaataaatttgccattataaaatatg |
2907714 |
T |
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| Q |
101 |
agatatttacttgaaag-----nnnnnnnnnnngatatttatgcaattatgtcccgacggatattgaacaaattttaaatcaaattccaaaaacattctt |
195 |
Q |
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| T |
2907715 |
agatatttacttgaaagaaaaaaaaaaaaaaaaaatatttatacaatgatgtcccaacggatattgaacaaattttaaatcaaattccaaaaacattctt |
2907814 |
T |
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