View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1157_low_16 (Length: 281)
Name: NF1157_low_16
Description: NF1157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1157_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 34945467 - 34945552
Alignment:
| Q |
72 |
taaaagaaaagaaatttggatgaaaattttgnnnnnnnnnnngttgataaaaggatgaaagtgacatttgacaagatgtgactcta |
157 |
Q |
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|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34945467 |
taaaagaaaagaaatttggatgaaaattgtgtttttttttttgttgataaaaggatgaaagtgacatttgacaagatgtgactcta |
34945552 |
T |
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