View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1157_low_19 (Length: 255)

Name: NF1157_low_19
Description: NF1157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1157_low_19
NF1157_low_19
[»] chr5 (39 HSPs)
chr5 (122-226)||(42013714-42013818)
chr5 (1-61)||(8675321-8675381)
chr5 (1-62)||(10649558-10649619)
chr5 (1-64)||(43441861-43441924)
chr5 (1-62)||(38704084-38704145)
chr5 (1-62)||(41175593-41175654)
chr5 (5-61)||(32912165-32912221)
chr5 (1-61)||(34270450-34270510)
chr5 (1-64)||(19839871-19839934)
chr5 (62-124)||(42013965-42014030)
chr5 (5-62)||(189590-189647)
chr5 (5-62)||(10658991-10659048)
chr5 (1-58)||(15952936-15952993)
chr5 (1-62)||(19481069-19481130)
chr5 (1-61)||(15478781-15478841)
chr5 (6-54)||(21353272-21353320)
chr5 (1-61)||(34124744-34124804)
chr5 (1-55)||(30004685-30004739)
chr5 (5-61)||(43213947-43214003)
chr5 (1-56)||(1179569-1179624)
chr5 (5-60)||(3640086-3640141)
chr5 (13-63)||(29463130-29463181)
chr5 (1-54)||(1293013-1293067)
chr5 (1-58)||(9226423-9226481)
chr5 (17-62)||(189521-189566)
chr5 (1-58)||(6446409-6446466)
chr5 (1-56)||(24405848-24405904)
chr5 (1-56)||(1839238-1839293)
chr5 (1-63)||(5007620-5007683)
chr5 (12-62)||(8920212-8920263)
chr5 (22-56)||(8097394-8097428)
chr5 (6-56)||(17626114-17626164)
chr5 (1-62)||(18695441-18695503)
chr5 (1-61)||(6940037-6940098)
chr5 (1-62)||(15008437-15008498)
chr5 (1-57)||(2224914-2224970)
chr5 (1-57)||(6517844-6517900)
chr5 (9-61)||(27546197-27546249)
chr5 (1-61)||(35098893-35098953)
[»] chr4 (77 HSPs)
chr4 (1-64)||(22819772-22819835)
chr4 (1-62)||(17683464-17683525)
chr4 (1-61)||(47099143-47099203)
chr4 (1-63)||(2999235-2999297)
chr4 (1-60)||(45143562-45143621)
chr4 (1-60)||(45152331-45152390)
chr4 (6-56)||(42491202-42491252)
chr4 (6-56)||(50831648-50831698)
chr4 (1-62)||(39344867-39344928)
chr4 (1-62)||(56271483-56271544)
chr4 (1-61)||(13086145-13086205)
chr4 (3-62)||(31657771-31657830)
chr4 (5-63)||(14010004-14010062)
chr4 (6-63)||(40609742-40609800)
chr4 (1-62)||(1815888-1815949)
chr4 (1-62)||(18882862-18882923)
chr4 (1-64)||(12799837-12799900)
chr4 (1-60)||(26718491-26718550)
chr4 (1-60)||(26731119-26731178)
chr4 (6-56)||(25221617-25221667)
chr4 (1-63)||(27408289-27408351)
chr4 (1-63)||(32696304-32696366)
chr4 (1-62)||(12138976-12139037)
chr4 (1-58)||(46405865-46405922)
chr4 (1-62)||(52846116-52846177)
chr4 (10-62)||(35936098-35936150)
chr4 (1-61)||(43769834-43769894)
chr4 (1-60)||(13139271-13139329)
chr4 (9-56)||(34995452-34995499)
chr4 (10-56)||(5250005-5250051)
chr4 (1-62)||(53654636-53654698)
chr4 (9-62)||(6520720-6520773)
chr4 (1-62)||(13104269-13104330)
chr4 (1-61)||(37060438-37060499)
chr4 (1-62)||(51887786-51887846)
chr4 (1-62)||(54669471-54669532)
chr4 (1-56)||(19174667-19174723)
chr4 (13-61)||(26712501-26712549)
chr4 (12-62)||(2401744-2401795)
chr4 (9-56)||(12595523-12595570)
chr4 (1-63)||(21025724-21025787)
chr4 (6-56)||(47744405-47744456)
chr4 (5-62)||(9362565-9362623)
chr4 (1-62)||(27371263-27371325)
chr4 (6-56)||(29891973-29892023)
chr4 (1-62)||(32696675-32696737)
chr4 (2-52)||(35897824-35897874)
chr4 (6-56)||(37297176-37297226)
chr4 (6-56)||(38382449-38382499)
chr4 (1-63)||(41486029-41486091)
chr4 (1-62)||(42062518-42062580)
chr4 (6-56)||(47181969-47182019)
chr4 (6-56)||(48402090-48402140)
chr4 (1-51)||(49896564-49896614)
chr4 (1-62)||(5932045-5932106)
chr4 (6-55)||(8279843-8279892)
chr4 (1-62)||(9118751-9118812)
chr4 (27-64)||(12375862-12375899)
chr4 (1-53)||(24990237-24990290)
chr4 (1-57)||(28657333-28657389)
chr4 (1-61)||(33860769-33860830)
chr4 (14-55)||(37060323-37060363)
chr4 (5-62)||(38338809-38338866)
chr4 (5-61)||(42667332-42667389)
chr4 (1-61)||(42815527-42815588)
chr4 (1-62)||(47965860-47965921)
chr4 (1-62)||(51194392-51194453)
chr4 (1-61)||(14451516-14451576)
chr4 (6-53)||(20760383-20760431)
chr4 (6-53)||(20766774-20766822)
chr4 (1-61)||(30079969-30080029)
chr4 (6-46)||(38380979-38381019)
chr4 (5-64)||(38715374-38715434)
chr4 (1-56)||(47288205-47288261)
chr4 (24-56)||(52895403-52895435)
chr4 (1-61)||(53152209-53152269)
chr4 (1-56)||(53796778-53796834)
[»] chr1 (67 HSPs)
chr1 (1-63)||(50328027-50328089)
chr1 (1-62)||(29154901-29154962)
chr1 (5-62)||(36577299-36577356)
chr1 (5-62)||(40316831-40316888)
chr1 (1-58)||(52714792-52714849)
chr1 (1-61)||(10889934-10889994)
chr1 (1-61)||(13489785-13489845)
chr1 (1-61)||(48326091-48326150)
chr1 (5-61)||(52362609-52362665)
chr1 (1-60)||(33358047-33358106)
chr1 (1-62)||(32914959-32915020)
chr1 (1-61)||(8200198-8200258)
chr1 (5-61)||(15704950-15705006)
chr1 (1-61)||(34254239-34254299)
chr1 (1-61)||(35136967-35137027)
chr1 (5-64)||(50781455-50781514)
chr1 (1-63)||(50824864-50824926)
chr1 (6-56)||(51571239-51571289)
chr1 (1-58)||(7101578-7101635)
chr1 (1-61)||(47721532-47721592)
chr1 (1-61)||(47728524-47728584)
chr1 (1-63)||(11597759-11597822)
chr1 (9-64)||(23621366-23621421)
chr1 (9-64)||(23738145-23738200)
chr1 (5-64)||(46543328-46543387)
chr1 (1-62)||(6143806-6143867)
chr1 (5-62)||(50881997-50882054)
chr1 (1-56)||(50239057-50239113)
chr1 (1-60)||(15015521-15015579)
chr1 (9-64)||(21433285-21433340)
chr1 (1-56)||(41507087-41507142)
chr1 (1-64)||(43893381-43893444)
chr1 (1-62)||(49241395-49241453)
chr1 (5-63)||(52267329-52267388)
chr1 (26-64)||(19969459-19969497)
chr1 (5-62)||(47215616-47215674)
chr1 (6-56)||(50775049-50775099)
chr1 (1-58)||(2211083-2211140)
chr1 (6-55)||(6809708-6809757)
chr1 (5-50)||(45417899-45417944)
chr1 (8-61)||(48220032-48220085)
chr1 (1-61)||(8447859-8447919)
chr1 (1-61)||(21093246-21093306)
chr1 (9-57)||(23652666-23652714)
chr1 (1-56)||(39712501-39712557)
chr1 (1-56)||(43367794-43367850)
chr1 (5-62)||(44294142-44294195)
chr1 (5-60)||(50433896-50433952)
chr1 (10-56)||(12127996-12128043)
chr1 (1-63)||(29147759-29147822)
chr1 (1-56)||(47398345-47398400)
chr1 (6-56)||(4466823-4466872)
chr1 (1-59)||(5486019-5486077)
chr1 (9-55)||(16063512-16063558)
chr1 (1-63)||(26837575-26837637)
chr1 (27-60)||(4608308-4608341)
chr1 (1-55)||(47990222-47990278)
chr1 (1-62)||(51286255-51286316)
chr1 (1-61)||(3603234-3603294)
chr1 (1-61)||(20565006-20565066)
chr1 (1-61)||(26585767-26585827)
chr1 (1-56)||(31317323-31317379)
chr1 (1-56)||(31433612-31433668)
chr1 (13-57)||(34040390-34040434)
chr1 (2-61)||(43560328-43560388)
chr1 (11-63)||(43769752-43769804)
chr1 (1-56)||(44517854-44517910)
[»] chr7 (41 HSPs)
chr7 (1-62)||(11352861-11352922)
chr7 (1-64)||(28036867-28036930)
chr7 (1-63)||(7817759-7817821)
chr7 (1-61)||(13729849-13729909)
chr7 (5-58)||(42555691-42555744)
chr7 (1-62)||(44184446-44184507)
chr7 (1-61)||(41894038-41894098)
chr7 (5-69)||(43573423-43573487)
chr7 (1-60)||(10055521-10055580)
chr7 (6-56)||(10700079-10700129)
chr7 (1-63)||(12645796-12645858)
chr7 (6-56)||(49069372-49069422)
chr7 (5-61)||(34757358-34757415)
chr7 (5-63)||(41458723-41458781)
chr7 (5-58)||(3343221-3343274)
chr7 (1-61)||(4713696-4713757)
chr7 (1-61)||(35600794-35600855)
chr7 (1-57)||(3062453-3062509)
chr7 (1-57)||(21822491-21822547)
chr7 (5-54)||(46532629-46532679)
chr7 (1-50)||(16980419-16980468)
chr7 (6-55)||(27473219-27473268)
chr7 (12-64)||(37899457-37899510)
chr7 (12-64)||(37905968-37906021)
chr7 (5-61)||(33180598-33180654)
chr7 (6-50)||(36533856-36533900)
chr7 (1-62)||(20337433-20337495)
chr7 (1-62)||(22817061-22817123)
chr7 (6-56)||(27568149-27568199)
chr7 (12-61)||(37899100-37899150)
chr7 (6-56)||(42553026-42553076)
chr7 (1-58)||(42926262-42926320)
chr7 (6-56)||(46022160-46022210)
chr7 (1-61)||(13401551-13401612)
chr7 (12-61)||(17945202-17945251)
chr7 (1-62)||(32815291-32815352)
chr7 (11-56)||(47356117-47356162)
chr7 (12-56)||(7701678-7701722)
chr7 (1-61)||(23048288-23048348)
chr7 (1-57)||(25067346-25067402)
chr7 (1-57)||(35588783-35588839)
[»] chr3 (62 HSPs)
chr3 (1-62)||(51465801-51465862)
chr3 (2-62)||(6999294-6999354)
chr3 (1-65)||(46019585-46019649)
chr3 (1-61)||(46852020-46852080)
chr3 (1-59)||(39697112-39697170)
chr3 (1-62)||(24482850-24482911)
chr3 (1-61)||(36412246-36412307)
chr3 (5-62)||(55400126-55400183)
chr3 (1-61)||(46253745-46253803)
chr3 (1-61)||(24095294-24095354)
chr3 (6-56)||(9719341-9719391)
chr3 (1-62)||(50206857-50206918)
chr3 (1-58)||(52937306-52937363)
chr3 (5-61)||(34057841-34057897)
chr3 (9-56)||(33256440-33256487)
chr3 (5-63)||(37927090-37927149)
chr3 (1-62)||(9158759-9158821)
chr3 (9-55)||(11075270-11075316)
chr3 (5-63)||(21005062-21005120)
chr3 (1-62)||(46965987-46966049)
chr3 (5-62)||(3953362-3953419)
chr3 (13-61)||(10811270-10811319)
chr3 (1-62)||(37410998-37411059)
chr3 (1-62)||(41281608-41281669)
chr3 (1-61)||(3281604-3281664)
chr3 (9-61)||(14771484-14771536)
chr3 (1-57)||(21196247-21196303)
chr3 (6-62)||(23183541-23183597)
chr3 (9-56)||(11056826-11056873)
chr3 (9-56)||(38359209-38359256)
chr3 (1-55)||(52564543-52564598)
chr3 (1-63)||(18741239-18741301)
chr3 (1-63)||(24645479-24645541)
chr3 (1-63)||(55282576-55282638)
chr3 (9-62)||(8709507-8709560)
chr3 (9-62)||(9061394-9061447)
chr3 (6-55)||(13348028-13348077)
chr3 (12-56)||(23770638-23770682)
chr3 (1-56)||(27511847-27511902)
chr3 (1-56)||(41670474-41670530)
chr3 (1-56)||(46965902-46965958)
chr3 (1-61)||(54195463-54195523)
chr3 (15-62)||(45205414-45205461)
chr3 (10-56)||(9311173-9311219)
chr3 (13-62)||(9753353-9753403)
chr3 (6-56)||(21217640-21217690)
chr3 (6-56)||(23592586-23592636)
chr3 (6-56)||(23600721-23600771)
chr3 (1-62)||(33795611-33795673)
chr3 (1-61)||(536163-536224)
chr3 (5-58)||(1337734-1337787)
chr3 (1-62)||(10206860-10206921)
chr3 (1-62)||(36121944-36122005)
chr3 (1-61)||(37035413-37035474)
chr3 (1-62)||(39670984-39671045)
chr3 (1-61)||(46965806-46965867)
chr3 (1-57)||(24480343-24480399)
chr3 (36-64)||(30567844-30567872)
chr3 (12-56)||(37056950-37056994)
chr3 (1-61)||(37508386-37508446)
chr3 (1-61)||(44677372-44677432)
chr3 (1-56)||(45693867-45693923)
[»] chr2 (66 HSPs)
chr2 (1-62)||(13765523-13765584)
chr2 (1-62)||(23352794-23352855)
chr2 (1-62)||(32869949-32870010)
chr2 (5-62)||(6170757-6170814)
chr2 (1-58)||(13347705-13347762)
chr2 (5-62)||(24562904-24562961)
chr2 (6-62)||(3012739-3012795)
chr2 (1-61)||(36643972-36644032)
chr2 (1-61)||(39213658-39213718)
chr2 (1-60)||(37105761-37105820)
chr2 (5-62)||(6998955-6999012)
chr2 (1-58)||(22525887-22525944)
chr2 (1-57)||(44254724-44254780)
chr2 (1-60)||(36517319-36517378)
chr2 (1-62)||(9634323-9634384)
chr2 (1-62)||(28245850-28245911)
chr2 (2-62)||(7574559-7574619)
chr2 (4-64)||(41586553-41586613)
chr2 (1-56)||(42430772-42430828)
chr2 (1-60)||(25881667-25881726)
chr2 (1-63)||(34119538-34119600)
chr2 (1-62)||(44050137-44050199)
chr2 (5-58)||(2563831-2563884)
chr2 (1-61)||(14255425-14255486)
chr2 (1-62)||(15269984-15270045)
chr2 (1-61)||(10711847-10711907)
chr2 (1-61)||(35589275-35589335)
chr2 (1-60)||(4023239-4023298)
chr2 (1-64)||(11167403-11167466)
chr2 (1-64)||(40936949-40937012)
chr2 (1-63)||(5054731-5054793)
chr2 (6-56)||(7258454-7258504)
chr2 (1-62)||(17898120-17898182)
chr2 (5-58)||(39449394-39449447)
chr2 (12-63)||(2971700-2971752)
chr2 (12-63)||(6646957-6647009)
chr2 (1-56)||(10833540-10833596)
chr2 (1-57)||(14233610-14233666)
chr2 (1-56)||(14890981-14891037)
chr2 (1-56)||(31296660-31296716)
chr2 (1-56)||(32701212-32701268)
chr2 (1-56)||(39147888-39147944)
chr2 (1-61)||(42866873-42866933)
chr2 (1-64)||(433973-434036)
chr2 (2-61)||(11091247-11091306)
chr2 (5-64)||(36211945-36212004)
chr2 (12-62)||(40443183-40443234)
chr2 (6-56)||(3097754-3097804)
chr2 (1-55)||(9377579-9377633)
chr2 (1-63)||(31389670-31389732)
chr2 (12-61)||(32972792-32972842)
chr2 (13-58)||(38821499-38821545)
chr2 (6-56)||(41056640-41056690)
chr2 (1-58)||(41910852-41910910)
chr2 (1-62)||(42678873-42678934)
chr2 (1-62)||(43513534-43513595)
chr2 (1-62)||(670359-670420)
chr2 (5-53)||(30546255-30546304)
chr2 (1-61)||(34134658-34134719)
chr2 (5-61)||(2221120-2221176)
chr2 (1-52)||(8293352-8293404)
chr2 (1-57)||(15245652-15245707)
chr2 (21-57)||(16677816-16677852)
chr2 (1-61)||(29712101-29712160)
chr2 (1-57)||(33780287-33780343)
chr2 (1-57)||(34431721-34431777)
[»] chr6 (26 HSPs)
chr6 (1-61)||(13143270-13143330)
chr6 (1-64)||(18141186-18141249)
chr6 (1-62)||(35213448-35213509)
chr6 (1-61)||(3832586-3832646)
chr6 (1-62)||(754325-754386)
chr6 (1-62)||(32459403-32459464)
chr6 (1-63)||(1369483-1369545)
chr6 (1-62)||(6531067-6531128)
chr6 (5-57)||(20822761-20822813)
chr6 (5-57)||(32046825-32046877)
chr6 (4-62)||(26832772-26832830)
chr6 (1-64)||(25127715-25127779)
chr6 (1-56)||(31749488-31749543)
chr6 (6-53)||(31883199-31883246)
chr6 (5-61)||(2688952-2689009)
chr6 (1-61)||(868840-868900)
chr6 (1-56)||(10826625-10826681)
chr6 (1-56)||(30945936-30945992)
chr6 (1-55)||(30956194-30956249)
chr6 (5-55)||(5028160-5028210)
chr6 (6-56)||(16199578-16199628)
chr6 (5-62)||(23628488-23628546)
chr6 (1-62)||(5327478-5327539)
chr6 (1-57)||(2075343-2075399)
chr6 (12-63)||(28748246-28748298)
chr6 (1-56)||(33656893-33656949)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-62)||(12055-12116)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-62)||(38548-38609)
[»] chr8 (47 HSPs)
chr8 (1-62)||(16872043-16872104)
chr8 (1-62)||(36885375-36885436)
chr8 (1-69)||(12707273-12707341)
chr8 (3-59)||(36568086-36568142)
chr8 (1-58)||(4658145-4658202)
chr8 (1-61)||(30439394-30439454)
chr8 (1-61)||(31597071-31597131)
chr8 (1-61)||(34018931-34018991)
chr8 (6-56)||(21526172-21526223)
chr8 (5-63)||(41541984-41542041)
chr8 (5-63)||(42569615-42569673)
chr8 (1-56)||(6445302-6445358)
chr8 (1-57)||(7472919-7472975)
chr8 (16-56)||(10592202-10592242)
chr8 (8-62)||(9208194-9208249)
chr8 (5-63)||(38234137-38234196)
chr8 (1-60)||(45508656-45508715)
chr8 (1-63)||(14707229-14707291)
chr8 (9-55)||(24795380-24795426)
chr8 (5-62)||(28646799-28646857)
chr8 (5-62)||(28651383-28651441)
chr8 (10-56)||(36969567-36969613)
chr8 (1-55)||(43397696-43397750)
chr8 (12-64)||(3946374-3946427)
chr8 (14-62)||(37754698-37754746)
chr8 (2-58)||(45519680-45519736)
chr8 (16-62)||(12284156-12284203)
chr8 (1-56)||(23792983-23793038)
chr8 (1-60)||(37597361-37597420)
chr8 (6-56)||(5740678-5740728)
chr8 (6-56)||(29025388-29025438)
chr8 (1-62)||(1633777-1633838)
chr8 (1-61)||(1871503-1871563)
chr8 (1-58)||(9549090-9549147)
chr8 (1-61)||(10644689-10644750)
chr8 (21-62)||(14863266-14863307)
chr8 (1-61)||(26000663-26000724)
chr8 (5-58)||(29933140-29933193)
chr8 (1-62)||(32843829-32843890)
chr8 (6-62)||(34718243-34718299)
chr8 (1-62)||(36110261-36110322)
chr8 (6-55)||(37942802-37942851)
chr8 (1-57)||(38708186-38708243)
chr8 (1-61)||(7586051-7586111)
chr8 (1-57)||(16327043-16327099)
chr8 (1-64)||(29991534-29991597)
chr8 (1-60)||(42110071-42110131)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-62)||(11087-11148)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-62)||(130-191)


Alignment Details
Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 42013818 - 42013714
Alignment:
Q  122 tacgttagatagataactacaataaatttagtttaataagataatgattgatttggatagagataacgataaagtcattaaatttaaagttatttacgtt 221  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  42013818 tacgttagatagataattagaataaatttagtttaataagataatgattgatttggatagagataacgataaagtcatcaaatttaaagttatttaagtt 42013719  T
Q  222 aaact 226  Q
     ||||    
T  42013718 gaact 42013714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8675381 - 8675321
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8675381 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 8675321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10649558 - 10649619
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  10649558 tttgtaaattatggttgtcacaaaagttgtcaaccaaatggttgttcaaataacactcctct 10649619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43441861 - 43441924
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  43441861 tttgtaaattatggttgtcttaaaagttgtcaaccaaatggttgttcaaataacactcctctat 43441924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38704145 - 38704084
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  38704145 tttgtaaattatggttgtcccaaaagttgttaatcaaatggttgttcaaataacacttctct 38704084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41175654 - 41175593
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  41175654 tttgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacactcctct 41175593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 32912165 - 32912221
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  32912165 taaattatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 32912221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34270450 - 34270510
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  34270450 tttgtaaattatggttgtctcaaaatttgtcaaccaaatggttgttcaaataacactcctc 34270510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19839934 - 19839871
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||||||||||||||||||||||||||| |||| ||||| |||||||||||||||| |||||||    
T  19839934 tttgtaaattatggttgtcccaaaagttatcaaccaaatagttgttcaaataacacgcctctat 19839871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 42014030 - 42013965
Alignment:
Q  62 tatgatttgataagtcctgtgataaattcgtggtaatt---ttaaattttgatgattttagtgtac 124  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||    
T  42014030 tatgatttgataagtcctgtgataaattcgtggtaattagaataaattttgatgattttagtgtac 42013965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 189647 - 189590
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  189647 taaattatgattgtcccaaaagttgtcaaccaaatgattgttcaaataacactcctct 189590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 10659048 - 10658991
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  10659048 taaattacggttgtgccaaaagttgtcaatcaaatggttgttcaaataacactcctct 10658991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15952993 - 15952936
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  15952993 tttgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacactc 15952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19481130 - 19481069
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  19481130 tttgtaaattatagttgtcccaaaagttatcaaccaaatgattgttcaaataacactcctct 19481069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15478781 - 15478841
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||| |||||| ||||||| ||||| |||||||||||||||||||||    
T  15478781 tttgtaaattatggttgttccaaaaattgtcaaccaaatagttgttcaaataacactcctc 15478841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 21353272 - 21353320
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataac 54  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||    
T  21353272 aaattatggttgtcccaaaagttgtcaatcaaatggttgtttaaataac 21353320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34124744 - 34124804
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||  |||| |||||||  ||||||||||||||||||||||||||    
T  34124744 tttgtaaattatggttgtcttaaaaattgtcaattaaatggttgttcaaataacactcctc 34124804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30004739 - 30004685
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    |||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||    
T  30004739 tttgtaaattatagttgttccaaaagttgtcaaccaaacggttgttcaaataaca 30004685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 43214003 - 43213947
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| |||||   |||||||||||| |||||||||||||||||||||||||||    
T  43214003 taaattatagttgttttaaaagttgtcaaccaaatggttgttcaaataacactcctc 43213947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1179624 - 1179569
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||| |||||   ||||||||||| |||||||||||||||||||||||    
T  1179624 tttgtaaattatagttgttttaaaagttgtcacacaaatggttgttcaaataacac 1179569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 3640141 - 3640086
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||||||||||| || ||||||||||  ||||||| |||||||||||||||||    
T  3640141 taaattatggttgtcacataagttgtcaactaaatggtagttcaaataacactcct 3640086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 29463130 - 29463181
Alignment:
Q  13 ggttgtcccaaaagttgtcaa-acaaatggttgttcaaataacactcctcta 63  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  29463130 ggttgtcccacaagttgtcaacaaaaatggttgttcaaataacactcctcta 29463181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1293067 - 1293013
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataac 54  Q
    |||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||    
T  1293067 tttgtaaatttatggttgtccaaaaagttgtcatacaaatggttattcaaataac 1293013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9226423 - 9226481
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactc 58  Q
    ||||||||||||  ||||| ||||||||||||| |||| ||||||||||||||||||||    
T  9226423 tttgtaaattataattgtcacaaaagttgtcaaccaaattggttgttcaaataacactc 9226481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 189566 - 189521
Alignment:
Q  17 gtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||    
T  189566 gtcccaaaaattgtcaaccaaatgattgttcaaataacactcctct 189521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6446466 - 6446409
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    |||||||||||||||||| | |||| ||||||| ||||| |||||||||||| |||||    
T  6446466 tttgtaaattatggttgttcaaaaaattgtcaaccaaattgttgttcaaatatcactc 6446409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24405904 - 24405848
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| || |||||  ||||||||||||||||||| ||||||||||||||||    
T  24405904 tttgtaaatttatagttgtttcaaaagttgtcaaacaaatagttgttcaaataacac 24405848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1839293 - 1839238
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||||||||||| || || |||| ||||||| | ||||||||||||    
T  1839293 tttgtaaattatggttgtcccataaattatcaaccaaatggcttttcaaataacac 1839238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5007683 - 5007620
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtc-aaacaaatggttgttcaaataacactcctcta 63  Q
    ||||| |||| ||||||||||| |||||||| ||| ||||||||||| ||||||||||| ||||    
T  5007683 tttgtcaattttggttgtcccacaagttgtctaaaaaaatggttgtttaaataacactcttcta 5007620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 8920212 - 8920263
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctct 62  Q
    ||||||||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  8920212 tggttgtcccacaagttgtcctacaaaatggttgttcaaataacactcctct 8920263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 8097394 - 8097428
Alignment:
Q  22 aaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||| ||||||||||||||||||||||    
T  8097394 aaaagttgtcaatcaaatggttgttcaaataacac 8097428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 17626114 - 17626164
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  17626114 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 17626164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18695441 - 18695503
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| |||||||||  | |||||||| | |||||||||||||||||||||| |||||    
T  18695441 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctct 18695503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6940098 - 6940037
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||| |||||||||  | |||||||| | |||||||||||||||||||||| ||||    
T  6940098 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 6940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15008498 - 15008437
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||  ||||| || |||||||||| |||||  |||||||||||||||| ||||    
T  15008498 tttgtaaattattattgtcacataagttgtcaaccaaataattgttcaaataacacttctct 15008437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2224914 - 2224970
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||||||||||  | |||||||||   || |||||||||||||||||||    
T  2224914 tttgtaaattatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 2224970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6517844 - 6517900
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||| ||| ||  ||||||| ||||  ||||||||||||||||||||||    
T  6517844 tttgtaaattatagttatcttaaaagttatcaattaaatggttgttcaaataacact 6517900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 27546197 - 27546249
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||| ||||| |||||||||||| |||||| ||| |||||||||||| ||||    
T  27546197 ttatgattgtctcaaaagttgtcacacaaatagttattcaaataacacacctc 27546249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35098953 - 35098893
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||| |||||  | |||||||||   || |||||||||||||||||||||||    
T  35098953 tttgtaaattatgattgtcaaataagttgtcaccaaattggttgttcaaataacactcctc 35098893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22819772 - 22819835
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22819772 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctctat 22819835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17683464 - 17683525
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17683464 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 17683525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47099143 - 47099203
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  47099143 tttgtaaattatggttgtcccaaaagttatcaaccaaatggttgttcaaataacactcctc 47099203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2999235 - 2999297
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  2999235 tttgtaaattatggttgtcctaaaagttgtcaattaaatggttgttcaaataacactcctcta 2999297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45143621 - 45143562
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  45143621 tttgtaaattatggttgtcccaaaagttgtcaaccaaatagttgttcaaataacaatcct 45143562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45152390 - 45152331
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  45152390 tttgtaaattatggttgtcccaaaagttgtcaaccaaatagttgttcaaataacaatcct 45152331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 42491202 - 42491252
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42491202 aaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacac 42491252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 50831698 - 50831648
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50831698 aaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacac 50831648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39344928 - 39344867
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  39344928 tttgtaaattatgattgtctcaaaagttatcaaccaaatggttgttcaaataacactcctct 39344867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 56271483 - 56271544
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||    
T  56271483 tttgtaaattatggttgtcataaaagttgtcaaacaaatggatgttcaaataacacttctct 56271544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13086145 - 13086205
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||||||||| | || |||| ||||||||||||||||||||||    
T  13086145 tttgtaaattatggttgtcccaaaagttattaatcaaacggttgttcaaataacactcctc 13086205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 31657771 - 31657830
Alignment:
Q  3 tgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  31657771 tgtaaatgatggttgtcccaaaaattgtcaaccaaatggttgtttaaataacactcctct 31657830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 14010062 - 14010004
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||    
T  14010062 taaattatggttgtcccaaaagttgtcaaccaaataattattcaaataacactcctcta 14010004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 40609742 - 40609800
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctcta 63  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  40609742 aaattatggttgtcacaaaagttgtcaaccaaattggttgttcaaataacactcctcta 40609800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1815949 - 1815888
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||| |||| || |||||||||| || |||||||||||||||||||||||||    
T  1815949 tttgtaaattatggctgtcacataagttgtcaaccagatggttgttcaaataacactcctct 1815888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18882923 - 18882862
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||| || | |||||||||||||| ||||||||||||||||||||||| ||||    
T  18882923 tttgtaaattatgatttttccaaaagttgtcaaccaaatggttgttcaaataacacttctct 18882862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12799837 - 12799900
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||||||| ||||| || ||||||| || ||||||||||||||||||||| ||||||||    
T  12799837 tttgtaaattatgattgtcacataagttgttaaccaaatggttgttcaaataacattcctctat 12799900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26718491 - 26718550
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||||||||| ||||||||||| || |||| ||||||||| ||||||||||||||||    
T  26718491 tttgtaaattatgattgtcccaaaaattatcaaccaaatggttattcaaataacactcct 26718550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26731119 - 26731178
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||||||||| ||||||||||| || |||| ||||||||| ||||||||||||||||    
T  26731119 tttgtaaattatgattgtcccaaaaattatcaaccaaatggttattcaaataacactcct 26731178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 25221667 - 25221617
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  25221667 aaattatggttgtccccaaagttgtctatcaaatggttgttcaaataacac 25221617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27408289 - 27408351
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||||||| ||||||||| ||||  |||| |||||| ||||||||||||||||    
T  27408289 tttgtaaattatggttgttccaaaagttatcaataaaatagttgtttaaataacactcctcta 27408351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32696304 - 32696366
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||||||||||  |||||||| | ||| ||||||||||||||||| |||||||    
T  32696304 tttgtaaattatggttgtcccttaagttgtccaccaattggttgttcaaataacattcctcta 32696366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12138976 - 12139037
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||  || ||||| |||| ||||||||||||||||||||| ||||||    
T  12138976 tttgtaaattatggttgttacataagttatcaatcaaatggttgttcaaataacattcctct 12139037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46405922 - 46405865
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    |||||||||||||||||||| |||| || |||| |||||| |||||||||||||||||    
T  46405922 tttgtaaattatggttgtccaaaaaattatcaaccaaatgattgttcaaataacactc 46405865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52846177 - 52846116
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||| |||||| |||| ||||||| ||||| |||||||||||||||| |||||    
T  52846177 tttgtaaattatgattgtcctaaaaattgtcaatcaaatagttgttcaaataacacccctct 52846116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 35936098 - 35936150
Alignment:
Q  10 tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||| |||||    
T  35936098 tatggttgtcctaaaagttgtcacacaaatgattgttcaaataacacacctct 35936150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43769834 - 43769894
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||| || ||||| ||||  |||| |||||||||||||||||||||    
T  43769834 tttgtaaattatggttgtcgcataagttatcaacaaaatagttgttcaaataacactcctc 43769894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13139271 - 13139329
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    |||||||||||| ||||||| |||| || |||| ||||||||||||||||||||||||||    
T  13139271 tttgtaaattatagttgtccaaaaa-ttatcaaccaaatggttgttcaaataacactcct 13139329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 34995452 - 34995499
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  34995452 ttatggttgtccctaaagttatcaaacaaatgattgttcaaataacac 34995499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 5250005 - 5250051
Alignment:
Q  10 tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||    
T  5250005 tatggttgccccataagttgtccaacaaatggttgttcaaataacac 5250051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53654698 - 53654636
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||||| || || |||| |||| ||||| ||||||||||||||||||    
T  53654698 tttgtaaattatggttgtcccataaattatcaatcaaattggttattcaaataacactcctct 53654636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 6520773 - 6520720
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| |||||  |||||| ||||||||||||||||||||||| |||||    
T  6520773 ttatggttgtaccaaatattgtcatacaaatggttgttcaaataacacacctct 6520720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13104330 - 13104269
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||    |||||||||| |||||||||||||||||| || ||||||    
T  13104330 tttgtaaattatggttgtcatgtaagttgtcaatcaaatggttgttcaaatatcattcctct 13104269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37060438 - 37060499
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaa-acaaatggttgttcaaataacactcctc 61  Q
    ||||||||||  ||||||| ||||||||||||| | |||||||| |||||||||||||||||    
T  37060438 tttgtaaatttaggttgtctcaaaagttgtcaacaaaaatggttattcaaataacactcctc 37060499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51887786 - 51887846
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||| ||||||||||||||| | ||||||||||  ||| |||||||||||||||||||||||    
T  51887786 tttgcaaattatggttgtcctataagttgtcaattaaa-ggttgttcaaataacactcctct 51887846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 54669532 - 54669471
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  54669532 tttgtaaattatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctct 54669471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19174723 - 19174667
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| ||| ||||| |||||||||||| |||| ||||||||||||||||||    
T  19174723 tttgtaaatttatgtttgtctcaaaagttgtcacacaattggttgttcaaataacac 19174667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 26712549 - 26712501
Alignment:
Q  13 ggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||| || |||| ||||||||||||||| ||||    
T  26712549 ggttgtcccaaaagttgtcacactaatgattgttcaaataacacacctc 26712501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 2401744 - 2401795
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctct 62  Q
    ||||||||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  2401744 tggttgtcccacaagttgtcctacaaaatggttgttcaaataacactcctct 2401795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 12595570 - 12595523
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||    
T  12595570 ttatggttgtcccaaaaattgtcatcaaaatggttgttcaaataacac 12595523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21025724 - 21025787
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||||| |||||||| ||||||||||||  ||| || ||||||||||||||| ||||||    
T  21025724 tttgtaaattagtggttgtcacaaaagttgtcactcaattgattgttcaaataacacacctcta 21025787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 47744456 - 47744405
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaac-aaatggttgttcaaataacac 56  Q
    ||||||||||||||||||||||| |||| | |||| ||||||||||||||||    
T  47744456 aaattatggttgtcccaaaagttatcaatcaaaatagttgttcaaataacac 47744405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 9362623 - 9362565
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacactcctct 62  Q
    |||| |||||||||| |||||||| ||||  |||| |||||||||||||||||||||||    
T  9362623 taaactatggttgtcacaaaagttatcaactaaattggttgttcaaataacactcctct 9362565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27371263 - 27371325
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| ||||||||| || ||||| ||||| |||| |||||||||||||||| |||||    
T  27371263 tttgtaaatttatggttgtctcataagttctcaaataaattgttgttcaaataacacacctct 27371325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 29891973 - 29892023
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||| ||| |||||| || ||||||||| ||||||||||||    
T  29891973 aaattatggttgtctcaatagttgttaatcaaatggttattcaaataacac 29892023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32696737 - 32696675
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| |||||||| | | || ||||||| |||||||||||||||||||||| |||||    
T  32696737 tttgtaaatttatggttgtacaataaattgtcaaccaaatggttgttcaaataacacacctct 32696675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 35897824 - 35897874
Alignment:
Q  2 ttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaata 52  Q
    ||||||| ||| ||||||||||||||| ||| | |||||||||||||||||    
T  35897824 ttgtaaaatatagttgtcccaaaagttatcatataaatggttgttcaaata 35897874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 37297176 - 37297226
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||||| | |||| ||||||||||||||    
T  37297176 aaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacac 37297226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 38382449 - 38382499
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  38382449 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 38382499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41486091 - 41486029
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||| ||||||||||  | |||||||||   || |||||||||||||||||||||||||    
T  41486091 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctcta 41486029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42062580 - 42062518
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctct 62  Q
    |||||| ||| ||||||||||| ||||||||  | ||| ||||||||||||||||||||||||    
T  42062580 tttgtatattttggttgtcccacaagttgtcccataaaatggttgttcaaataacactcctct 42062518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 47181969 - 47182019
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  47181969 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 47182019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 48402140 - 48402090
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  48402140 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 48402090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49896614 - 49896564
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaat 51  Q
    ||||||||||||||||||| ||  ||||||| | |||||||||||||||||    
T  49896614 tttgtaaattatggttgtctcatgagttgtccaccaaatggttgttcaaat 49896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5932106 - 5932045
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  5932106 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 5932045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 8279892 - 8279843
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    |||||||| ||||| |||||||| |||| |||| ||||||||||||||||    
T  8279892 aaattatgattgtctcaaaagttatcaatcaaacggttgttcaaataaca 8279843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9118812 - 9118751
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  9118812 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 9118751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 12375899 - 12375862
Alignment:
Q  27 ttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  12375899 ttgtcatacaaatggttgttcaaataacacacctctat 12375862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24990237 - 24990290
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataa 53  Q
    |||||||||| |||||||||||| ||||||||| ||||||| || |||||||||    
T  24990237 tttgtaaatttatggttgtcccataagttgtcatacaaatgattattcaaataa 24990290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28657389 - 28657333
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacact 57  Q
    ||||||||||||||||||| | ||||||||||| |||| | |||||||||||||||||    
T  28657389 tttgtaaattatggttgtcac-aaagttgtcaaccaaattcgttgttcaaataacact 28657333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33860769 - 33860830
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctc 61  Q
    |||||||||||| |||||| |  |||||||||| |||| ||||||||||||||| |||||||    
T  33860769 tttgtaaattatcgttgtcacgtaagttgtcaatcaaattggttgttcaaataatactcctc 33860830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 37060363 - 37060323
Alignment:
Q  14 gttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  37060363 gttgtcacaaaagttgtcaaa-aaatggttgttcaaataaca 37060323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 38338866 - 38338809
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||| |||||| || |||| |||||| |||||| ||||| ||||||||    
T  38338866 taaattatggttgttccaaaaattatcaaccaaatgattgttcgaataatactcctct 38338809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 42667332 - 42667389
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctc 61  Q
    ||||||||||||||| || |||||||||| |||| || ||||| ||||||||||||||    
T  42667332 taaattatggttgtcgcataagttgtcaaccaaattgattgtttaaataacactcctc 42667389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42815527 - 42815588
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||| |||||||||  | |||||||| | |||||||||||||||||||||| ||||    
T  42815527 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 42815588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47965860 - 47965921
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  47965860 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 47965921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51194392 - 51194453
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  51194392 tttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctct 51194453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14451516 - 14451576
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| ||||||||||  | |||||||||   || |||||||||||||||||||||||    
T  14451516 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctc 14451576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 20760383 - 20760431
Alignment:
Q  6 aaattatggttgtccc-aaaagttgtcaaacaaatggttgttcaaataa 53  Q
    |||||||||||||||| |||| || |||| |||||||||||||||||||    
T  20760383 aaattatggttgtcccaaaaaattatcaatcaaatggttgttcaaataa 20760431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 20766774 - 20766822
Alignment:
Q  6 aaattatggttgtccc-aaaagttgtcaaacaaatggttgttcaaataa 53  Q
    |||||||||||||||| |||| || |||| |||||||||||||||||||    
T  20766774 aaattatggttgtcccaaaaaattatcaatcaaatggttgttcaaataa 20766822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30079969 - 30080029
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||  | ||||| |||   || |||||||||||||||||||||||    
T  30079969 tttgtaaattatggttgtcaaataagttttcaccaaattggttgttcaaataacactcctc 30080029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 38381019 - 38380979
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgtt 46  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  38381019 aaattatggttgtcttaaaagttgtcaaccaaatggttgtt 38380979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 38715374 - 38715434
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatgg-ttgttcaaataacactcctctat 64  Q
    |||||||| |||||| || |||||||||| ||||| | |||||||||||||||| ||||||    
T  38715374 taaattatagttgtcacacaagttgtcaaccaaattgattgttcaaataacacttctctat 38715434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47288205 - 47288261
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| |||||||| |||||| || ||| |||||||||| ||||||||||||    
T  47288205 tttgtaaatttatggttgttccaaaaattatcacacaaatggttattcaaataacac 47288261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 52895403 - 52895435
Alignment:
Q  24 aagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| ||||||||||||||||||||||    
T  52895403 aagttgtcaatcaaatggttgttcaaataacac 52895435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 53152269 - 53152209
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| ||||||||||  | |||||||||   || |||||||||||||||||||||||    
T  53152269 tttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctc 53152209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53796778 - 53796834
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| |||||||| ||||||||||||  ||| | ||||||||||||||||    
T  53796778 tttgtaaattagtggttgtcacaaaagttgtcattcaattagttgttcaaataacac 53796834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50328089 - 50328027
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  50328089 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcta 50328027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29154901 - 29154962
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  29154901 tttgtaaattatcgttgtcccataagttgtcaaccaaatggttgttcaaataacactcctct 29154962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 36577356 - 36577299
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  36577356 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctct 36577299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 40316888 - 40316831
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  40316888 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctct 40316831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 52714849 - 52714792
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  52714849 tttgtaaattattgttgtcccaaaagttgtcaatcaaatggttgttcaaataacactc 52714792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10889994 - 10889934
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  10889994 tttgtaaattatggttgtcacaaaagttgtcaaccaaatagttgttcaaataacactcctc 10889934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13489785 - 13489845
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||    
T  13489785 tttgtaaattatggttgtcccagaagttgtcaaccaaatagttgttcaaataacactcctc 13489845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 48326091 - 48326150
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  48326091 tttgtaaattatggttgtcc-aaaagttgtcaaccaaatggttgttcaaataacactcctc 48326150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 52362609 - 52362665
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  52362609 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctc 52362665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33358106 - 33358047
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  33358106 tttgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacactcct 33358047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32915020 - 32914959
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  32915020 tttgtaaattatgattgttccaaaagttgtcaaccaaatagttgttcaaataacactcctct 32914959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8200198 - 8200258
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||    
T  8200198 tttgtaaattatggttgtcccataagttgtcaaccaaaaggctgttcaaataacactcctc 8200258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 15705006 - 15704950
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||    
T  15705006 taaattatggttgtcctaaaagttatcaaccaaatggttgttcaaataacactcctc 15704950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34254299 - 34254239
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  34254299 tttgtaaattatagttgtcccaaaagttatcaaccaaatgattgttcaaataacactcctc 34254239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35136967 - 35137027
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||||||||    
T  35136967 tttgtaaattatggttgtcctaaaaattgtcaaccaaatgattgttcaaataacactcctc 35137027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 50781514 - 50781455
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||| |||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  50781514 taaattatgattgtcctaaaagttgtctaccaaatggttgttcaaataacactcctctat 50781455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50824864 - 50824926
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||||||||||||  || |||||||| | |||||||||||||||||||||||||||||    
T  50824864 tttgtaaattatggttgtatcataagttgtccaccaaatggttgttcaaataacactcctcta 50824926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 51571289 - 51571239
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  51571289 aaattatggttgtcccaaaaattgtcaatcaaatggttgttcaaataacac 51571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7101635 - 7101578
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  7101635 tttgtaaattatgattgtctctaaagttgtcaatcaaatggttgttcaaataacactc 7101578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47721532 - 47721592
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||| |||||||| |  ||||||||||| ||||||||||||||    
T  47721532 tttgtaaattatggttgtcccataagttgtccactaaatggttgtttaaataacactcctc 47721592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47728524 - 47728584
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||| |||||||| |  ||||||||||| ||||||||||||||    
T  47728524 tttgtaaattatggttgtcccataagttgtccactaaatggttgtttaaataacactcctc 47728584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11597759 - 11597822
Alignment:
Q  1 tttgtaaat-tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||    
T  11597759 tttgtaaatctatggttgtcccataagttgtcaagcaaatggatgttcaaataacacacctcta 11597822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 23621421 - 23621366
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||    
T  23621421 ttatggttgtaccataagttgtcaatcaaatggttgttcaaataacacttctctat 23621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 23738200 - 23738145
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||    
T  23738200 ttatggttgtaccataagttgtcaatcaaatggttgttcaaataacacttctctat 23738145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 46543387 - 46543328
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||  ||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  46543387 taaattataattgtcccaaaaattatcaaccaaatggttgttcaaataacactcctctat 46543328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6143806 - 6143867
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||  ||| |||||||| |||||| |||||||||||||| ||||||    
T  6143806 tttgtaaattatggttgtcttaaatgttgtcaaccaaatgattgttcaaataacaatcctct 6143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 50882054 - 50881997
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||| ||||| || || ||||||| ||||||||||||||||||||||||||||    
T  50882054 taaattatgattgtcacataaattgtcaatcaaatggttgttcaaataacactcctct 50881997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50239113 - 50239057
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||||    
T  50239113 tttgtaaattagtggttgtcacaaaagttgtcactcaaatggttgttcaaataacac 50239057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15015521 - 15015579
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    |||||||||||||||||||||| || || |||| ||||| ||||||||||||||||||||    
T  15015521 tttgtaaattatggttgtcccataa-ttatcaaccaaatagttgttcaaataacactcct 15015579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 21433340 - 21433285
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||||||  |||||||||| ||||||| ||||||||||||||| |||||||    
T  21433340 ttatggttgtcctgaaagttgtcacacaaatgattgttcaaataacacacctctat 21433285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41507142 - 41507087
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||| ||||||  | |||||||||| ||||||||||||||||||||||    
T  41507142 tttgtaaattatagttgtcaaataagttgtcaaccaaatggttgttcaaataacac 41507087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43893381 - 43893444
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||||| ||| ||||||||||| ||||||||    |||||||||||||||||||||||||||||    
T  43893381 tttgtatattttggttgtcccacaagttgtccgtaaaatggttgttcaaataacactcctctat 43893444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49241453 - 49241395
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||| ||||| |||||||   ||| ||||||||||||||||||||||||||||    
T  49241453 tttgtaaattatgattgtctcaaaagt---caatcaaatggttgttcaaataacactcctct 49241395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 52267329 - 52267388
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacactcctcta 63  Q
    ||||||||||||| | |||||| |||||| ||||| ||||||||||||||||||||||||    
T  52267329 taaattatggttggcacaaaagctgtcaatcaaattggttgttcaaataacactcctcta 52267388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 19969497 - 19969459
Alignment:
Q  26 gttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19969497 gttgtcaaccaaatggttgttcaaataacactcctctat 19969459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 47215674 - 47215616
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctct 62  Q
    ||||||||||||||| |||||||| |||| |||| | ||||||||||||||||||||||    
T  47215674 taaattatggttgtcacaaaagttatcaaccaaattagttgttcaaataacactcctct 47215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 50775099 - 50775049
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||| ||||| ||||||| |||||||| |||||||||||||    
T  50775099 aaattatggttgtcacaaaatttgtcaatcaaatggtcgttcaaataacac 50775049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2211140 - 2211083
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    |||||||| ||||| |||| || |||||||||| |||| |||||||||||||||||||    
T  2211140 tttgtaaactatggctgtctcataagttgtcaatcaaacggttgttcaaataacactc 2211083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 6809708 - 6809757
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||||||||    
T  6809708 aaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 6809757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 45417899 - 45417944
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaa 50  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||    
T  45417899 taaattatggttgtcacataagttgtcaatcaaatggttgttcaaa 45417944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 48220085 - 48220032
Alignment:
Q  8 attatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||| | ||||| |||||||||| |||||| ||||||||||||||||||||    
T  48220085 attatggctttcccataagttgtcaaccaaatgattgttcaaataacactcctc 48220032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8447859 - 8447919
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||| ||||| || ||||| ||||  ||||| ||||||||||||||||||||    
T  8447859 tttgtaaattatgattgtcacataagttatcaactaaatgattgttcaaataacactcctc 8447919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21093306 - 21093246
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||  ||| |||| |  || |||||||||||||||||||||||    
T  21093306 tttgtaaattatggttgtcccttaagctgtccactaattggttgttcaaataacactcctc 21093246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 23652714 - 23652666
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||| ||| |||||||||| || ||||||||||||||||||||    
T  23652714 ttatggttgtaccataagttgtcaatcagatggttgttcaaataacact 23652666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39712501 - 39712557
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| |||||||| |||||||| |||  ||||||||||||||||||||||    
T  39712501 tttgtaaattagtggttgtcacaaaagttatcactcaaatggttgttcaaataacac 39712557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43367850 - 43367794
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| |||||||| | ||||||||||| ||||||| |||||||||||||||    
T  43367850 tttgtaaatttatggttgttctaaaagttgtcacacaaatgattgttcaaataacac 43367794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 44294142 - 44294195
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| |||||||||||||||||||| ||||    ||||||||||||||||||||    
T  44294142 taaattatagttgtcccaaaagttgtcaatcaaa----tgttcaaataacactcctct 44294195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 50433896 - 50433952
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcct 60  Q
    ||||||||||||||| || |||||||||| |||| | ||||||||||||||||||||    
T  50433896 taaattatggttgtcacacaagttgtcaatcaaattcgttgttcaaataacactcct 50433952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 12127996 - 12128043
Alignment:
Q  10 tatggttgtcccaaaagttgtcaa-acaaatggttgttcaaataacac 56  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||||    
T  12127996 tatggttgtcccataagttatcaatacaaatggttgttcaaataacac 12128043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29147822 - 29147759
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatgg-ttgttcaaataacactcctcta 63  Q
    ||||||||||||||||||| || || || |||| ||||| | ||||||||||||||||||||||    
T  29147822 tttgtaaattatggttgtcacataaattatcaaccaaattgattgttcaaataacactcctcta 29147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47398400 - 47398345
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||||||||  |||||||||||   ||||||||| |||||||||||    
T  47398400 tttgtaaattatggttgtctaaaaagttgtcattaaaatggttgctcaaataacac 47398345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 4466823 - 4466872
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  4466823 aaattatggttgttccaaaaattgtcat-caaatggttgttcaaataacac 4466872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5486019 - 5486077
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcc 59  Q
    ||||||||||||||||||   | ||||||||||  ||||| ||||||||||||||||||    
T  5486019 tttgtaaattatggttgttttataagttgtcaagtaaatgattgttcaaataacactcc 5486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 16063558 - 16063512
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||||||||||||||| || ||| |||||| |||||||||||||||    
T  16063558 ttatggttgtcccaaaaattatcacacaaatagttgttcaaataaca 16063512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26837575 - 26837637
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||| ||||||||||  | |||||||||   || |||||||||||||||||||||||||    
T  26837575 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctcta 26837637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 4608308 - 4608341
Alignment:
Q  27 ttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||| ||||||||||||||||||||||||||    
T  4608308 ttgtcaaccaaatggttgttcaaataacactcct 4608341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 47990278 - 47990222
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaac--aaatggttgttcaaataaca 55  Q
    |||||| ||| ||||||||||| ||||||||||||  |||| |||||||||||||||    
T  47990278 tttgtatattttggttgtcccacaagttgtcaaacaaaaatagttgttcaaataaca 47990222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51286316 - 51286255
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| ||||||||  | ||||||||| | || ||||||||||||||||||| ||||    
T  51286316 tttgtaaattttggttgtcaaataagttgtcacaaaattggttgttcaaataacactactct 51286255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3603234 - 3603294
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| ||||||||||  | |||||||||   || |||||||||||||||||||||||    
T  3603234 tttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctc 3603294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20565066 - 20565006
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| ||||||||||  | |||||||||   || |||||||||||||||||||||||    
T  20565066 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctc 20565006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26585827 - 26585767
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| ||||||||||  | |||||||||   || |||||||||||||||||||||||    
T  26585827 tttgtaaagtatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctc 26585767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31317379 - 31317323
Alignment:
Q  1 tttgtaaat-tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||| |||| ||||||||||| |||||| |||||| |||||| |||||||||    
T  31317379 tttgtaaatctatgattgtcccaaaaattgtcacacaaattgttgtttaaataacac 31317323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31433612 - 31433668
Alignment:
Q  1 tttgtaaat-tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||| |||||||||| || ||||| ||| |||||| ||||||||||||||||    
T  31433612 tttgtaaatctatggttgtctcataagttatcatacaaatagttgttcaaataacac 31433668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34040434 - 34040390
Alignment:
Q  13 ggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    ||||||||||||| || |||| ||||||||||||||||| |||||    
T  34040434 ggttgtcccaaaaattatcaatcaaatggttgttcaaattacact 34040390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 43560328 - 43560388
Alignment:
Q  2 ttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||| |||||||| ||||| ||||||  |||||| ||||||||||||||| ||||    
T  43560328 ttgtaaattagtggttgtcacaaaaattgtcactcaaatgattgttcaaataacacacctc 43560388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 43769752 - 43769804
Alignment:
Q  11 atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||| || |||||||||| |||||| || ||||||||||| |||||||    
T  43769752 atggttgtctcataagttgtcaaccaaatgattattcaaataacattcctcta 43769804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44517910 - 44517854
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| || ||| ||||||||||| ||| || ||||||||||||||||||||    
T  44517910 tttgtaaatttatagttatcccaaaagttatcacacgaatggttgttcaaataacac 44517854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11352922 - 11352861
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11352922 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 11352861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28036867 - 28036930
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  28036867 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaattaacactcctctat 28036930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7817759 - 7817821
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||    
T  7817759 tttgtaaattatggttgtcacataagttgtcaaccaaatggttgttcaaataacactcctcta 7817821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13729849 - 13729909
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||    
T  13729849 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgctgaaataacactcctc 13729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 42555691 - 42555744
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42555691 taaattatggttgtctcaaaagttgtcaaccaaatggttgttcaaataacactc 42555744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44184507 - 44184446
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| ||||    
T  44184507 tttgtaaattatggttgttccaaaagttgtcaaccaaatggttgttcaaataatactactct 44184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41894038 - 41894098
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||||||||    
T  41894038 tttgtaaattatggttgtcacaaaaattgtcaactaaatggttgttcaaataacactcctc 41894098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 43573487 - 43573423
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctatgattt 69  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||||| ||||    
T  43573487 taaattatggttgtctcaaaaattgtcaaccaaatgattgttcaaataacactcctctattattt 43573423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10055580 - 10055521
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    |||||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||||    
T  10055580 tttgtaaattatagttgtcccataagttgtcaaccaaatggttgtttaaataacactcct 10055521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 10700129 - 10700079
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  10700129 aaattatggttgtcccaaaagttgtcaatcaaatgattgttcaaataacac 10700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12645858 - 12645796
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||||| || ||||||||||||| ||||| |||||||||||| ||||||||||    
T  12645858 tttgtaaattatggttatctcaaaagttgtcaaccaaatagttgttcaaatatcactcctcta 12645796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 49069372 - 49069422
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  49069372 aaattatagttgtcccaaaagttgtcaatcaaatggttgttcaaataacac 49069422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 34757415 - 34757358
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctc 61  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  34757415 taaattatggttgtcacaaaagttgtcaaccaaattggttgttcaaataacactcctc 34757358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 41458723 - 41458781
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||||    |||||||||| |||||||||||||||||||||||||||||    
T  41458723 taaattatggttgtcatgtaagttgtcaaccaaatggttgttcaaataacactcctcta 41458781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 3343274 - 3343221
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    |||||||||||||||  |||||||||||| ||||| ||||||||||||||||||    
T  3343274 taaattatggttgtcttaaaagttgtcaatcaaatagttgttcaaataacactc 3343221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4713696 - 4713757
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||| || |||||||||| |||| ||||| |||||||||||||||||    
T  4713696 tttgtaaattatggttgtcacataagttgtcaaccaaattggttattcaaataacactcctc 4713757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35600794 - 35600855
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||| |||||||| ||||||||||||  |||||||||||||||||||||| ||||    
T  35600794 tttgtaaattagtggttgtcacaaaagttgtcactcaaatggttgttcaaataacacacctc 35600855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3062453 - 3062509
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||||||||||    |||||||||| |||||||||||||||||||||||    
T  3062453 tttgtaaattatggttgtcatgtaagttgtcaaccaaatggttgttcaaataacact 3062509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21822547 - 21822491
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    ||||||||||||||||||   ||||||||||||  ||||||||||||||||||||||    
T  21822547 tttgtaaattatggttgttttaaaagttgtcaactaaatggttgttcaaataacact 21822491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 46532629 - 46532679
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataac 54  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  46532629 taaattatggttgtcacaaaagttgtcaaccaaattggttgttcaaataac 46532679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16980419 - 16980468
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaa 50  Q
    ||||||||||||| ||||| |||||||||||||  |||||||||||||||    
T  16980419 tttgtaaattatgattgtctcaaaagttgtcaactaaatggttgttcaaa 16980468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 27473219 - 27473268
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||||||||||||| ||| ||||||||  ||||||||||||||||||||    
T  27473219 aaattatggttgtcctaaatgttgtcaataaaatggttgttcaaataaca 27473268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 37899457 - 37899510
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctctat 64  Q
    ||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||    
T  37899457 tggttgtcccacaagttgtcctacaaaatggttgttcaaataacactcctctat 37899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 37905968 - 37906021
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctctat 64  Q
    ||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||    
T  37905968 tggttgtcccacaagttgtcctacaaaatggttgttcaaataacactcctctat 37906021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 33180654 - 33180598
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||  ||||| || |||||||||| ||||||||||||||||||| |||||||    
T  33180654 taaattatcattgtctcataagttgtcaaccaaatggttgttcaaataatactcctc 33180598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 36533856 - 36533900
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaa 50  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  36533856 aaattatggttgtcccaaaagttgtcatcaaaatggttgttcaaa 36533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20337433 - 20337495
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| |||||| || || ||||||||| |||||| |||||||||||||||| |||||    
T  20337433 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctct 20337495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22817061 - 22817123
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||| ||||| || ||||||||||||  ||| |||||||||||||||||| |||||    
T  22817061 tttgtaaattagtggttatcacaaaagttgtcattcaattggttgttcaaataacacacctct 22817123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 27568149 - 27568199
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||||||||| ||||||| ||  ||||| |||||||||||||||    
T  27568149 aaattatggttgtcccagaagttgttaataaaatgattgttcaaataacac 27568199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 37899150 - 37899100
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctc 61  Q
    ||||||||||| ||||||||  ||||| |||||||||||||||||||||||    
T  37899150 tggttgtcccacaagttgtcctacaaaatggttgttcaaataacactcctc 37899100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 42553026 - 42553076
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| || |||||||| ||||  |||||||||||||||||||||    
T  42553026 aaattatggttttctcaaaagttatcaattaaatggttgttcaaataacac 42553076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42926262 - 42926320
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactc 58  Q
    ||||||||||||||||||| || || ||||||| |||| |||||||| |||||||||||    
T  42926262 tttgtaaattatggttgtcacataaattgtcaaccaaattggttgttaaaataacactc 42926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 46022210 - 46022160
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  46022210 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 46022160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13401612 - 13401551
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||| |||||||| ||||| ||||||   ||||||||||||||||||||| ||||    
T  13401612 tttgtaaattagtggttgtcacaaaaattgtcacttaaatggttgttcaaataacacacctc 13401551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 17945202 - 17945251
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| ||||||||||||  ||| |||||||||||||||||| ||||    
T  17945202 tggttgtcacaaaagttgtcattcaattggttgttcaaataacacacctc 17945251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32815291 - 32815352
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  32815291 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 32815352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 47356117 - 47356162
Alignment:
Q  11 atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||  ||||||||| ||||||||||||| |||||||||    
T  47356117 atggttgtcccgtaagttgtcatacaaatggttgttaaaataacac 47356162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 7701678 - 7701722
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||| |||||||||||| | |||||| ||||||||||||||    
T  7701678 tggttgtctcaaaagttgtcatataaatggatgttcaaataacac 7701722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23048348 - 23048288
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||   | |||||||||   || |||||||||||||||||||||||    
T  23048348 tttgtaaattatggttgtaaaataagttgtcaccaaattggttgttcaaataacactcctc 23048288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25067346 - 25067402
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||||||| ||  | || ||||||| |||||||||||| ||||||||||    
T  25067346 tttgtaaattatggttatcatataaattgtcaaccaaatggttgtttaaataacact 25067402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 35588839 - 35588783
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    ||||||||||||  ||||| ||||| || ||||  ||||||||||||||||||||||    
T  35588839 tttgtaaattataattgtctcaaaaattatcaattaaatggttgttcaaataacact 35588783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51465862 - 51465801
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51465862 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 51465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 6999294 - 6999354
Alignment:
Q  2 ttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  6999294 ttgtaaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctct 6999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 46019585 - 46019649
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctatg 65  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  46019585 tttgtaaattatggttgttccaaaagttgtcaaccaaatggttgttcaaataacactactctatg 46019649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46852080 - 46852020
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  46852080 tttgtaaattatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 46852020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39697170 - 39697112
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcc 59  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  39697170 tttgtaaattatggttgtcccaaaagttgtcaatcaaatagttgttcaaataacactcc 39697112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24482911 - 24482850
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  24482911 tttgtaagttatggttgtcccaaaagttgtaaaccaaatggttgttcaaataacactcctct 24482850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36412246 - 36412307
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaa-caaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  36412246 tttgtaaattatggttgtcccataagttgtcaaaccaaatggttgttcaaataacactcctc 36412307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 55400126 - 55400183
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  55400126 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctct 55400183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 46253745 - 46253803
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  46253745 tttgtaaattatggttgtcccaaaagttgtcaatc--atggttgttcaaataacactcctc 46253803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24095354 - 24095294
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||||    
T  24095354 tttgtaaattatggttgtcataaaagttgtcaaccaaatggatgttcaaataacactcctc 24095294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 9719391 - 9719341
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  9719391 aaattatggttatcccaaaagttgtcaatcaaatggttgttcaaataacac 9719341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50206918 - 50206857
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||| |||||||||||||||    
T  50206918 tttgtaaattatggttgtcctaaaagttgtcaactaaatagttgtttaaataacactcctct 50206857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 52937306 - 52937363
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||    
T  52937306 tttgtaaattatggttgtctcaaaaattatcaaccaaatggttgttcaaataacactc 52937363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 34057897 - 34057841
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  34057897 taaattatagttgtcctaaaagttgtcaatcaaatggttgttcaaacaacactcctc 34057841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 33256440 - 33256487
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33256440 ttatggttgtcctaaaagttgtcacacaaatggttgttcaaataacac 33256487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 37927149 - 37927090
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacactcctcta 63  Q
    ||||||||||||||| || |||||||||| ||||| ||||||||||||||||||||||||    
T  37927149 taaattatggttgtcacacaagttgtcaatcaaattggttgttcaaataacactcctcta 37927090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9158821 - 9158759
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||    
T  9158821 tttgtaaattatggttgtcacataagttgtcaaccaaattagttgttcaaataacactcctct 9158759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 11075316 - 11075270
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  11075316 ttatggttgtctcaaaagttgtcatacaaatggttgttcaaataaca 11075270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21005120 - 21005062
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||| |||||||||||||| |||| ||||||||| |||||||| ||||||||||    
T  21005120 taaattatgattgtcccaaaagttatcaaccaaatggttcttcaaatatcactcctcta 21005062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46966049 - 46965987
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| ||| |||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  46966049 tttgtaaatttatgattgtccgaaaagttgtcacacaaatggttgttcaaataacacacctct 46965987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 3953419 - 3953362
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||| ||||| ||||| ||||||| |||||| |||||||||||||||||||||    
T  3953419 taaattatgattgtctcaaaaattgtcaaccaaatgattgttcaaataacactcctct 3953362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 10811270 - 10811319
Alignment:
Q  13 ggttgtcccaaaagttgtcaa-acaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  10811270 ggttgtcccaaaagttgtcaacaaaaatggttgttcaaataacactcctc 10811319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37410998 - 37411059
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||  || | ||||||||  |||||||||||||||||||||||||||    
T  37410998 tttgtaaattatggttgtttcataggttgtcaactaaatggttgttcaaataacactcctct 37411059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41281669 - 41281608
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| | ||||| ||| |||||||||| |||||| |||||||||||||||||||||    
T  41281669 tttgtaaattttagttgttccataagttgtcaaccaaatgattgttcaaataacactcctct 41281608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3281664 - 3281604
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||    |||||| ||| |||||||||||||||||||||||||||    
T  3281664 tttgtaaattatggttgtcatgtaagttgacaaccaaatggttgttcaaataacactcctc 3281604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 14771536 - 14771484
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  14771536 ttatgattgtcccaaaaattgtcaaacaaatggttattcaaataacacacctc 14771484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21196247 - 21196303
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    ||||||||||||| || ||||| || ||||||| |||||||||||||||||||||||    
T  21196247 tttgtaaattatgattatcccataaattgtcaatcaaatggttgttcaaataacact 21196303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 23183541 - 23183597
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||   | |||||||||| ||||||||||||||||||||||||||||    
T  23183541 aaattatggttgtataataagttgtcaatcaaatggttgttcaaataacactcctct 23183597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 11056873 - 11056826
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||    
T  11056873 ttatggttgtctcaaaagttgttatacaaatggttgttcaaataacac 11056826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 38359256 - 38359209
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  38359256 ttatggttgtccaaaaagttctcaatcaaatggttgttcaaataacac 38359209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 52564598 - 52564543
Alignment:
Q  1 tttgtaaat-tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||    
T  52564598 tttgtaaatctatggttgtcccataagttgtcatagaaatggttgttcaaataaca 52564543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18741239 - 18741301
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||||||||||| || || || | |||||||||||||||||| || |||||||    
T  18741239 tttgtaaattatggttgtcccataaattatccaccaaatggttgttcaaatagcaatcctcta 18741301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24645479 - 24645541
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||||||||  |||||||||||| ||| ||| ||||||||||| ||| |||||    
T  24645479 tttgtaaattatggttgtcataaaagttgtcaaccaagtggatgttcaaataatacttctcta 24645541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 55282638 - 55282576
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||  |||||| || |||||||||| ||||||||| |||||||||||||| ||||    
T  55282638 tttgtaaattacagttgtctcataagttgtcaaccaaatggttattcaaataacactcttcta 55282576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 8709507 - 8709560
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||||||||| || ||| ||||| ||||||||| |||||    
T  8709507 ttatggttgtcccaaaagttgtcaatcagatgattgttgaaataacacacctct 8709560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 9061394 - 9061447
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||||||||| || ||| ||||| ||||||||| |||||    
T  9061394 ttatggttgtcccaaaagttgtcaatcagatgattgttgaaataacacacctct 9061447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 13348077 - 13348028
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||| ||||||||||||||||||||| | |||||| |||||||||||||    
T  13348077 aaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 13348028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 23770682 - 23770638
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||    
T  23770682 tggttgtcacaaaagttgtcactcaaatggttgttcaaataacac 23770638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27511847 - 27511902
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| |||||||||| ||||||||||| |||||| ||||||||||||||||    
T  27511847 tttgtaaatttatggttgtcc-aaaagttgtcacacaaattgttgttcaaataacac 27511902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41670530 - 41670474
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| || ||||| ||||||||||||  ||||||||||||||||||||||    
T  41670530 tttgtaaattagtgattgtcacaaaagttgtcactcaaatggttgttcaaataacac 41670474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46965958 - 46965902
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| ||| |||||| ||||||||||| |||||| ||||||||||||||||    
T  46965958 tttgtaaatttatgattgtcctaaaagttgtcacacaaattgttgttcaaataacac 46965902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54195463 - 54195523
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||  | |||||||||   || |||||||||||||||||||||||    
T  54195463 tttgtaaattatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctc 54195523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 45205414 - 45205461
Alignment:
Q  15 ttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||| |||||||||||| |||||||||||||||||||| || |||||    
T  45205414 ttgtctcaaaagttgtcacacaaatggttgttcaaataatacacctct 45205461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 9311173 - 9311219
Alignment:
Q  10 tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||||| |||||||  |||||||| |||||||||||||||    
T  9311173 tatggttgtcccataagttgttcaacaaatgattgttcaaataacac 9311219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 9753353 - 9753403
Alignment:
Q  13 ggttgtcccaaaagttgtcaa-acaaatggttgttcaaataacactcctct 62  Q
    |||||||||| |||||||||| | ||||| |||||||||||||||||||||    
T  9753353 ggttgtcccacaagttgtcaacaaaaatgattgttcaaataacactcctct 9753403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 21217640 - 21217690
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  21217640 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 21217690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 23592586 - 23592636
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  23592586 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 23592636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 23600721 - 23600771
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  23600721 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 23600771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33795673 - 33795611
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||| |  ||||||||||  ||| ||||||||||||||||| ||||||    
T  33795673 tttgtaaattatggttgtcacgtaagttgtcaactaaattggttgttcaaataacattcctct 33795611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 536224 - 536163
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||| |||||||| |||| |||||||  ||| |||||||||||||||||| ||||    
T  536224 tttgtaaattagtggttgtcacaaacgttgtcattcaattggttgttcaaataacacacctc 536163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 1337787 - 1337734
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||||||||||||| || ||||||| || |||||||||||| |||||| ||||    
T  1337787 taaattatggttgtctcataagttgttaaccaaatggttgttaaaataaaactc 1337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10206921 - 10206860
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  10206921 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 10206860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36121944 - 36122005
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  36121944 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 36122005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37035474 - 37035413
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||| |||||||| |||||||| |||  |||||| ||||||||||||||| ||||    
T  37035474 tttgtaaattagtggttgtcacaaaagttatcattcaaatgattgttcaaataacacacctc 37035413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39671045 - 39670984
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  39671045 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 39670984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46965867 - 46965806
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||| |||||||||| ||||||||||| ||||||| | ||| ||||||||| ||||    
T  46965867 tttgtaaatttatggttgtcctaaaagttgtcacacaaatgatcgtttaaataacacacctc 46965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24480399 - 24480343
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    ||||||||||||| |||| | ||||||| |||| |||||  ||||||||||||||||    
T  24480399 tttgtaaattatgattgtgcaaaaagttatcaaccaaataattgttcaaataacact 24480343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 30567872 - 30567844
Alignment:
Q  36 aaatggttgttcaaataacactcctctat 64  Q
    |||||||||||||||||||||||||||||    
T  30567872 aaatggttgttcaaataacactcctctat 30567844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 37056994 - 37056950
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||| |||||||||||| | |||||| ||||||||||||||    
T  37056994 tggttgtctcaaaagttgtcatataaatggatgttcaaataacac 37056950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37508446 - 37508386
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| ||||||||||  | |||||||||   || |||||||||||||||||||||||    
T  37508446 tttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctc 37508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44677432 - 44677372
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||| ||||||||||  | |||||||||   || |||||||||||||||||||||||    
T  44677432 tttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctc 44677372  T

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Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45693867 - 45693923
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| |||||||| ||||| || |||  ||||||||||||||||||||||    
T  45693867 tttgtaaattaatggttgtcacaaaaattatcactcaaatggttgttcaaataacac 45693923  T

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Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13765523 - 13765584
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13765523 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 13765584  T

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Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23352855 - 23352794
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  23352855 tttgtaaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctct 23352794  T

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Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32869949 - 32870010
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  32869949 tttgtaaattatggttgtcccaaaaattgtcaaccaaatggttgttcaaataacactcctct 32870010  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 6170757 - 6170814
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  6170757 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctct 6170814  T

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Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13347762 - 13347705
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  13347762 tttgtaaattatggttgtcccaaaaattgtcaaccaaatggttgttcaaataacactc 13347705  T

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Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 24562961 - 24562904
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  24562961 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacactcctct 24562904  T

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Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 3012795 - 3012739
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  3012795 aaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacactcctct 3012739  T

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Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36644032 - 36643972
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  36644032 tttgtaaattatggttgtcccataaattgtcaaccaaatggttgttcaaataacactcctc 36643972  T

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Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39213718 - 39213658
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  39213718 tttgtaaatgatggttgtcccaaaagttgtcaatcaaatggttgtttaaataacactcctc 39213658  T

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Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37105761 - 37105820
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  37105761 tttgtaaattatggttgtcacaaaagttgtcaaccaaatagttgttcaaataacactcct 37105820  T

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Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 6999012 - 6998955
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  6999012 taaattatggttgtcctaaaagttgtcaaccaaatggttgtttaaataacactcctct 6998955  T

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Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22525944 - 22525887
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  22525944 tttgtaaattatggttgtctcaaaagttatcaatcaaatggttgttcaaataacactc 22525887  T

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Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44254724 - 44254780
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  44254724 tttgtaaattatggttatcccataagttgtcaatcaaatggttgttcaaataacact 44254780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36517319 - 36517378
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||||||||| |||||||||||||| |||| ||||| ||||||||||||||||||||    
T  36517319 tttgtaaattatgattgtcccaaaagttatcaatcaaatagttgttcaaataacactcct 36517378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9634384 - 9634323
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||| | |||||||||||| |||||| |||||||||||||||| ||||    
T  9634384 tttgtaaattatggttgttcaaaaagttgtcaaccaaatgattgttcaaataacacttctct 9634323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28245850 - 28245911
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||| ||||    
T  28245850 tttgtaaattaaggttgtttcaaaagttgtcaaccaaatggttgttcaaataacacttctct 28245911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 7574559 - 7574619
Alignment:
Q  2 ttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||||| ||||    
T  7574559 ttgtaaattatagttgttccaaaaattgtcaaccaaatggttgttcaaataacacttctct 7574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 41586613 - 41586553
Alignment:
Q  4 gtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||||||||| ||| ||||||||||  |||||||||||||||||||||| ||||||    
T  41586613 gtaaattatggttgttccataagttgtcaactaaatggttgttcaaataacacttctctat 41586553  T

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Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42430772 - 42430828
Alignment:
Q  1 tttgtaaa-ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  42430772 tttgtaaacttatggttgttccaaaagttgtcacacaaatggttgttcaaataacac 42430828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25881667 - 25881726
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    |||||||||||||| |||  ||||||||||||| ||||||||||||||||||| ||||||    
T  25881667 tttgtaaattatggctgtttcaaaagttgtcaaccaaatggttgttcaaataagactcct 25881726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34119600 - 34119538
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||  |||| || |||||||||| ||||||||||||||||| |||||||||||    
T  34119600 tttgtaaattatgagtgtctcataagttgtcaaccaaatggttgttcaaattacactcctcta 34119538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44050137 - 44050199
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||| |||||    
T  44050137 tttgtaaatttatggttgtctcaaaagttgtcgcacaaatggttgttcaaataacacacctct 44050199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 2563831 - 2563884
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||||||| |||||| |||||||||||| |||||| |||||||||||||||||    
T  2563831 taaattatgattgtcctaaaagttgtcaaccaaatgattgttcaaataacactc 2563884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14255425 - 14255486
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||| |||||||||||||||||||||  | ||||||||||||||||||||| ||||    
T  14255425 tttgtaaatttatggttgtcccaaaagttgtcgcataaatggttgttcaaataacacacctc 14255486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15269984 - 15270045
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||| ||  ||||||| |||| ||||||| ||||||||||||||||||||    
T  15269984 tttgtaaattatggttatcataaaagttatcaaccaaatggatgttcaaataacactcctct 15270045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10711847 - 10711907
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||| ||||  |||||||| |||| ||||| |||||||||||||||||||||    
T  10711847 tttgtaaattatgattgtttcaaaagttatcaaccaaatagttgttcaaataacactcctc 10711907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35589335 - 35589275
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||||||||| || ||||  |||| |||||| ||||||||||||||    
T  35589335 tttgtaaattatggttgtcccaaaaattatcaactaaatagttgtttaaataacactcctc 35589275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4023298 - 4023239
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    ||||||||||||| ||||| || || ||||||| |||||||||||| |||||||||||||    
T  4023298 tttgtaaattatgattgtctcataaattgtcaaccaaatggttgttgaaataacactcct 4023239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11167466 - 11167403
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||||||||||||  || ||||| |||| |||||||||||||||||||| || ||||||    
T  11167466 tttgtaaattatggttgttacataagttatcaagcaaatggttgttcaaataactcttctctat 11167403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40937012 - 40936949
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||||||||||||| || || ||||||   |||||||| ||||||||||||||||||||    
T  40937012 tttgtaaattatggttgtcacataaattgtcagctaaatggttattcaaataacactcctctat 40936949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5054731 - 5054793
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||| |||||| || |||||||||| ||||| ||| ||||||||||||| |||||    
T  5054731 tttgtaaattattgttgtcacataagttgtcaaccaaatagttattcaaataacacttctcta 5054793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 7258504 - 7258454
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||| |||||||||||| |||| || ||||||||||||||||||||||    
T  7258504 aaattatagttgtcccaaaaattgttaatcaaatggttgttcaaataacac 7258454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17898182 - 17898120
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctct 62  Q
    |||||||||||||||| ||| | |||||||||| |||| |||| |||||||||||||||||||    
T  17898182 tttgtaaattatggttatccgataagttgtcaaccaaattggtggttcaaataacactcctct 17898120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 39449394 - 39449447
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||| |||||||| |||||| ||||||| |||||||||||| |||||||||||    
T  39449394 taaatgatggttgttccaaaaattgtcaatcaaatggttgtttaaataacactc 39449447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 2971752 - 2971700
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctcta 63  Q
    ||||||||||| ||||||||  ||||| |||||||||||||||||||||||||    
T  2971752 tggttgtcccacaagttgtcttacaaaatggttgttcaaataacactcctcta 2971700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 6646957 - 6647009
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctcta 63  Q
    ||||||||||| ||||||||  ||||| |||||||||||||||||||||||||    
T  6646957 tggttgtcccacaagttgtcctacaaaatggttgttcaaataacactcctcta 6647009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10833596 - 10833540
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| |||||||| ||||||||||||  ||| ||||||||||||||||||    
T  10833596 tttgtaaattagtggttgtcacaaaagttgtcactcaattggttgttcaaataacac 10833540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14233666 - 14233610
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||||||||||    ||||||||||  ||||||||||||||||||||||    
T  14233666 tttgtaaattatggttgtcttgtaagttgtcaacaaaatggttgttcaaataacact 14233610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14891037 - 14890981
Alignment:
Q  1 tttgtaaat-tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||| ||||||||| ||| ||||||| || ||||||||||||||||||||||    
T  14891037 tttgtaaatctatggttgttccataagttgttaatcaaatggttgttcaaataacac 14890981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31296660 - 31296716
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| |||||||||  ||||||||||| || ||||||||||||||||||||    
T  31296660 tttgtaaatttatggttgtcataaaagttgtcacactaatggttgttcaaataacac 31296716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32701212 - 32701268
Alignment:
Q  1 tttgtaaa-ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||| ||||||||| |||||||||| ||| | |||||||||||||||||||||    
T  32701212 tttgtaaacttatggttgccccaaaagttatcatataaatggttgttcaaataacac 32701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39147888 - 39147944
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| ||| ||||||||||||||||||   |||||||||||||||||||||    
T  39147888 tttgtaaatttatgattgtcccaaaagttgtcattaaaatggttgttcaaataacac 39147944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42866873 - 42866933
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||| ||||| |  |||||||| | |||||||||||| ||||||||||||||    
T  42866873 tttgtaaattatgattgtcacgtaagttgtcgatcaaatggttgttaaaataacactcctc 42866933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 433973 - 434036
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||||||| ||||||||||  | ||||||||| | || || |||||||||||||||||||||||    
T  433973 tttgtaaagtatggttgtcaaataagttgtcacaaaattgattgttcaaataacactcctctat 434036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 11091306 - 11091247
Alignment:
Q  2 ttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||| || || || |||| ||||| |||||||||||||||| ||||    
T  11091306 ttgtaaattatggttgtctcataaattatcaaccaaattgttgttcaaataacacccctc 11091247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 36212004 - 36211945
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||| ||||| || || || |||| |||||||||||||||||||||||| |||||    
T  36212004 taaattatgattgtcacataatttatcaaccaaatggttgttcaaataacactcatctat 36211945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 40443183 - 40443234
Alignment:
Q  12 tggttgtcccaaaagttgtcaa-acaaatggttgttcaaataacactcctct 62  Q
    ||||||||||| ||||| |||| | |||||||||||||||||||||||||||    
T  40443183 tggttgtcccacaagttatcaacaaaaatggttgttcaaataacactcctct 40443234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 3097804 - 3097754
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  3097804 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 3097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9377579 - 9377633
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    |||||||||||||  |||| || ||||||||||  ||||||||||||||||||||    
T  9377579 tttgtaaattatgactgtctcataagttgtcaactaaatggttgttcaaataaca 9377633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31389670 - 31389732
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||| |||||||||||  | |||||||||   || |||||||||||||||||||||||||    
T  31389670 tttgtaagttatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctcta 31389732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 32972842 - 32972792
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctc 61  Q
    ||||||||||| ||||||||  ||||| |||||||||||||||||||||||    
T  32972842 tggttgtcccacaagttgtcctacaaaatggttgttcaaataacactcctc 32972792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 38821499 - 38821545
Alignment:
Q  13 ggttgtcccaaaagttgtcaa-acaaatggttgttcaaataacactc 58  Q
    ||||||||||||||||||||| | |||| ||||||||||||||||||    
T  38821499 ggttgtcccaaaagttgtcaacaaaaattgttgttcaaataacactc 38821545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 41056690 - 41056640
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  41056690 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 41056640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41910852 - 41910910
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacactc 58  Q
    ||||||||||||||||||| ||  | ||||||| ||||| |||||||||||||||||||    
T  41910852 tttgtaaattatggttgtcacatgaattgtcaatcaaattggttgttcaaataacactc 41910910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42678873 - 42678934
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaa-atggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||| ||||| ||||||| |||  || |||||||||||||||||||||    
T  42678873 tttgtaaattatggttgtcacaaaa-ttgtcaaccaatttgattgttcaaataacactcctct 42678934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43513534 - 43513595
Alignment:
Q  1 tttgtaaattatggttgtcccaa-aagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||| |||||||||| | ||||||||||  ||| |||||||||||||||||||||||    
T  43513534 tttgtaaattttggttgtccccataagttgtcaattaaa-ggttgttcaaataacactcctct 43513595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 670420 - 670359
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  670420 tttgtaaaatatggttgtcaaataagttgtcatcaaattggttgttcaaataacactcctct 670359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 30546304 - 30546255
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataa 53  Q
    ||||||||||||||| ||||||||||||| |||| | |||||||||||||    
T  30546304 taaattatggttgtcacaaaagttgtcaaccaaattagttgttcaaataa 30546255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34134719 - 34134658
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||| |||||||||  | |||||||| | |||||||||||||||||||||| ||||    
T  34134719 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 34134658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 2221120 - 2221176
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||| || || ||||||||||  ||||  ||||||||||||||||||||    
T  2221120 taaattatggttatcacataagttgtcaacaaaattattgttcaaataacactcctc 2221176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8293352 - 8293404
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaata 52  Q
    ||||||||||| |||||||| ||||||||||||  ||| ||||||||||||||    
T  8293352 tttgtaaattagtggttgtcacaaaagttgtcattcaattggttgttcaaata 8293404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15245707 - 15245652
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    ||||||||||||| ||||| || |||||||| || |||| |||||||||||||||||    
T  15245707 tttgtaaattatgattgtctcataagttgtc-aagaaattgttgttcaaataacact 15245652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 16677816 - 16677852
Alignment:
Q  21 caaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  16677816 caaaagttgtcaaccaaatgattgttcaaataacact 16677852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29712101 - 29712160
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||    ||||| |||| ||||||||||||||||||||| |||||    
T  29712101 tttgtaaattatggttgtcatgtaagtt-tcaaccaaatggttgttcaaataacagtcctc 29712160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33780343 - 33780287
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||| ||||||||||  | ||||||| |  |||||||||||||||||||||||    
T  33780343 tttgtaaactatggttgtcgtataagttgttagtcaaatggttgttcaaataacact 33780287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34431777 - 34431721
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    ||||||| ||||||||||| |  ||||| |||| |||||| ||||||||||||||||    
T  34431777 tttgtaagttatggttgtcacgtaagttatcaaccaaatgattgttcaaataacact 34431721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13143330 - 13143270
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13143330 tttgtaaattatggttgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctc 13143270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18141249 - 18141186
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  18141249 tttgtaaattatggttgtcacaaaagttgtcaaccaaatggttgttcaaataacactcctctat 18141186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35213509 - 35213448
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35213509 tttgtaaattatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctct 35213448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3832586 - 3832646
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  3832586 tttgtaaattatggttgtcccataagttgtcaatcaaatggttgttcaaataacactcctc 3832646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 754386 - 754325
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  754386 tttgtaaattatggttgttccaaaaattgtcaaccaaatggttgttcaaataacactcctct 754325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32459464 - 32459403
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  32459464 tttgtaaattatggttgtcctaaaagttgtcaatcaaattgttgttcaaataacactcctct 32459403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1369483 - 1369545
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||    
T  1369483 tttgtaaattatggttgtctcaaaaattgtcaaccaaatggttgttcaaataacactcatcta 1369545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6531128 - 6531067
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||    
T  6531128 tttgtaaattatggttgtcccattagttatcaaccaaatggttgttcaaataacactcctct 6531067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 20822813 - 20822761
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  20822813 taaattatggttgtcctaaaagttgtcaaccaaatggttgttcaaataacact 20822761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 32046825 - 32046877
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  32046825 taaattatggttgtcccataagttgtcaaccaaatggttgttcaaataacact 32046877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 26832772 - 26832830
Alignment:
Q  4 gtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||| || |||||||||| ||||||||||||||||||| ||| ||||    
T  26832772 gtaaattatggttgtcacataagttgtcaatcaaatggttgttcaaataagacttctct 26832830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25127779 - 25127715
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||||||||| |||||||||||| || |||||  ||||||||||||||||||||||| |||||||    
T  25127779 tttgtaaatttatggttgtcccagaatttgtcgcacaaatggttgttcaaataacacacctctat 25127715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31749488 - 31749543
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||||||||||| |  |||||||||| |||||| |||||||||||||||    
T  31749488 tttgtaaattatggttgtctcttaagttgtcaatcaaatgattgttcaaataacac 31749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 31883246 - 31883199
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataa 53  Q
    |||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  31883246 aaattatggttgtcccaaaaattgtcaatcaaatagttgttcaaataa 31883199  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 2689009 - 2688952
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctc 61  Q
    ||||||||||||||| ||||||||||||| |||| || |||||||||||||| |||||    
T  2689009 taaattatggttgtcacaaaagttgtcaaccaaattgattgttcaaataacattcctc 2688952  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 868900 - 868840
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||||||| ||    ||| |||||| |||||||||||||||||||||||||||    
T  868900 tttgtaaattatggttatcatgtaaggtgtcaaccaaatggttgttcaaataacactcctc 868840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10826625 - 10826681
Alignment:
Q  1 tttgtaaatta-tggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||| |||||||| |||||||| |||  ||||||||||||||||||||||    
T  10826625 tttgtaaattagtggttgtcacaaaagttatcactcaaatggttgttcaaataacac 10826681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30945936 - 30945992
Alignment:
Q  1 tttgtaaat-tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||| ||||||||| ||| ||||| ||| |||||||||||||||||||||||    
T  30945936 tttgtaaatctatggttgttccataagttttcatacaaatggttgttcaaataacac 30945992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30956194 - 30956249
Alignment:
Q  1 tttgtaaat-tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||||||| ||||||||||||| ||||| ||| | ||||||||||||||||||||    
T  30956194 tttgtaaatctatggttgtcccataagttttcatataaatggttgttcaaataaca 30956249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 5028210 - 5028160
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||||||||||||| || ||||| |||| |||||| ||||||||||||||    
T  5028210 taaattatggttgtctcataagttatcaaccaaatgattgttcaaataaca 5028160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 16199578 - 16199628
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| |||||||| |||||||||||| | |||||| ||||||||||||||    
T  16199578 aaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 16199628  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 23628488 - 23628546
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacactcctct 62  Q
    |||||||||||||||  |||| ||||||| ||||| ||||||| |||||||||||||||    
T  23628488 taaattatggttgtcataaaaattgtcaaccaaattggttgtttaaataacactcctct 23628546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5327539 - 5327478
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  5327539 tttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 5327478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2075399 - 2075343
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||||||||||  | |||||||||   || |||||||||||||||||||    
T  2075399 tttgtaaattatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 2075343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 28748246 - 28748298
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctcta 63  Q
    ||||||||||| ||||||||  ||||| |||||||||||||||||||| ||||    
T  28748246 tggttgtcccacaagttgtcctacaaaatggttgttcaaataacactcttcta 28748298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33656893 - 33656949
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| |||||||||  | || ||||||| ||||||||||||||||||||||    
T  33656893 tttgtaaatttatggttgtcaaataaattgtcaatcaaatggttgttcaaataacac 33656949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12055 - 12116
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  12055 tttgtaaattatggttgtcgcaaaagttgtcaaccaaatagttgttcaaataacactcctct 12116  T

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Target: scaffold0136 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38548 - 38609
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  38548 tttgtaaattatagttgtcccaaaagttgtcaactaaatggttgttcaaataacactcctct 38609  T

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Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16872104 - 16872043
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  16872104 tttgtaaattatggttgtcccaaaagttgttaaccaaatggttgttcaaataaccctcctct 16872043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36885436 - 36885375
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  36885436 tttgtaaattatggttgtcccataagttgtccaccaaatggttgttcaaataacactcctct 36885375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12707273 - 12707341
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctctatgattt 69  Q
    |||||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||||||| ||||    
T  12707273 tttgtaaattatggttgtcccataagtgctcaaccaaatggttgttcaaataacactcctctattattt 12707341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 36568086 - 36568142
Alignment:
Q  3 tgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcc 59  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  36568086 tgtaaattatggttgtcccataagttgtcaatcaaatggttgttcaaataacactcc 36568142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4658202 - 4658145
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  4658202 tttgtaaattatggttgtcctaaaagttgtcaattaaatggttgttcaaataacactc 4658145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30439454 - 30439394
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||    
T  30439454 tttgtaaattatggttgtcacataagttatcaaccaaatggttgttcaaataacactcctc 30439394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31597071 - 31597131
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||||||    
T  31597071 tttgtaaattatgattgtctcaaaagttatcaatcaaatggttgttcaaataacactcctc 31597131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34018931 - 34018991
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||||    
T  34018931 tttgtaaattatggttgtcccgaaagttgttaaccaaatggttgatcaaataacactcctc 34018991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 21526223 - 21526172
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaa-caaatggttgttcaaataacac 56  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  21526223 aaattatggttgtcccaaaagttgtcaaatcaaatggttgtttaaataacac 21526172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 41541984 - 41542041
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||||||    
T  41541984 taaattatggttgtcccataagttgtcaaccaaatggttgttcaaa-aacgctcctcta 41542041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 42569673 - 42569615
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    |||||||||||||||| |||| || |||| ||||||||||||||||||| |||||||||    
T  42569673 taaattatggttgtcctaaaaattatcaaccaaatggttgttcaaataatactcctcta 42569615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6445302 - 6445358
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||    
T  6445302 tttgtaaatttatggttgtcccataagttgtcaatcaaatggtcgttcaaataacac 6445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7472975 - 7472919
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||||||| | | |||||||||||| ||||| |||||||||||||||||    
T  7472975 tttgtaaattatggttattctaaaagttgtcaaccaaatagttgttcaaataacact 7472919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 10592242 - 10592202
Alignment:
Q  16 tgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  10592242 tgtcccaaaagttgtcaatcaaatggttgttcaaataacac 10592202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 9208194 - 9208249
Alignment:
Q  8 attatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacactcctct 62  Q
    ||||| |||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  9208194 attatagttgtcacaaaagttgtcaaccaaattggttgttcaaataacactcctct 9208249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 38234137 - 38234196
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctcta 63  Q
    ||||||||||||||| || |||||||||| |||| |||||||||||||||||||| ||||    
T  38234137 taaattatggttgtcacacaagttgtcaaccaaattggttgttcaaataacactcttcta 38234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45508656 - 45508715
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    |||||||||||||||||||||| || || ||||  |||| ||||||||||||||||||||    
T  45508656 tttgtaaattatggttgtcccataaattatcaactaaattgttgttcaaataacactcct 45508715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14707291 - 14707229
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctcta 63  Q
    ||||||||||||| ||||| || |||||||| | ||||| |||||||||||||||||| ||||    
T  14707291 tttgtaaattatgattgtctcataagttgtccaccaaatagttgttcaaataacactcatcta 14707229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 24795380 - 24795426
Alignment:
Q  9 ttatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||||||||| || |||||||||||||||| |||||||||||||||    
T  24795380 ttatggttgtctcataagttgtcaaacaaatagttgttcaaataaca 24795426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 28646799 - 28646857
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacactcctct 62  Q
    |||||||||||| || || |||||||||| ||||| |||||||||||||||||||||||    
T  28646799 taaattatggttatcacataagttgtcaatcaaattggttgttcaaataacactcctct 28646857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 28651383 - 28651441
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacactcctct 62  Q
    |||||||||||| || || |||||||||| ||||| |||||||||||||||||||||||    
T  28651383 taaattatggttatcacataagttgtcaatcaaattggttgttcaaataacactcctct 28651441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 36969613 - 36969567
Alignment:
Q  10 tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  36969613 tatggttgtcgcataagttgtcaaacaaatggatgttcaaataacac 36969567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43397696 - 43397750
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||||||||||| ||||| | ||||||||||| ||||| |||||||||||||||    
T  43397696 tttgtaaattatgattgtctctaaagttgtcaaccaaatagttgttcaaataaca 43397750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 3946374 - 3946427
Alignment:
Q  12 tggttgtcccaaaagttgtcaaacaaa-tggttgttcaaataacactcctctat 64  Q
    ||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||    
T  3946374 tggttgtcccacaagttgtcctacaaaatggttgttcaaataacactcctctat 3946427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 37754698 - 37754746
Alignment:
Q  14 gttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||| |||||    
T  37754698 gttgttccaaaagttgtcatacaaatggttgtttaaataacacacctct 37754746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 45519680 - 45519736
Alignment:
Q  2 ttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    ||||||||||||||| || || |  ||||||| ||||||||||||||||||||||||    
T  45519680 ttgtaaattatggttatctcatacattgtcaaccaaatggttgttcaaataacactc 45519736  T

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Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 12284203 - 12284156
Alignment:
Q  16 tgtcccaaaagttgtcaa-acaaatggttgttcaaataacactcctct 62  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||||    
T  12284203 tgtcccacaagttgtcaacaaaaatggttgttcaaataacactcctct 12284156  T

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Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23793038 - 23792983
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    |||||||||||| |||||| || || ||||||| |||||||||||| |||||||||    
T  23793038 tttgtaaattatagttgtctcataaattgtcaaccaaatggttgttgaaataacac 23792983  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37597361 - 37597420
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcct 60  Q
    |||||||||||||||||||  | ||||||||||  | ||| |||||||||||||||||||    
T  37597361 tttgtaaattatggttgtcttataagttgtcaactatatgattgttcaaataacactcct 37597420  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 5740728 - 5740678
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||||||||||||| |||||||||| |  |||||| ||||||||||||||    
T  5740728 aaattatggttgtcctaaaagttgtctataaaatggctgttcaaataacac 5740678  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 29025388 - 29025438
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacac 56  Q
    ||||| ||||||||||||||||||||| | |||||| |||| |||||||||    
T  29025388 aaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacac 29025438  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1633838 - 1633777
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  1633838 tttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 1633777  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1871563 - 1871503
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacactcctc 61  Q
    |||||||||||||||||||  | ||||||| || ||||| ||||||||||||||||||||||    
T  1871563 tttgtaaattatggttgtcaaataagttgt-aatcaaattggttgttcaaataacactcctc 1871503  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9549147 - 9549090
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    |||||||||||||||||||  |||||||||||| |||||  ||||| |||||| ||||    
T  9549147 tttgtaaattatggttgtctaaaaagttgtcaaccaaataattgttgaaataatactc 9549090  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10644750 - 10644689
Alignment:
Q  1 tttgtaaatt-atggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||| |||||||||  | |||||||| | |||||||||||||||||||||| ||||    
T  10644750 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 10644689  T

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Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 14863266 - 14863307
Alignment:
Q  21 caaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||  ||||||||||||||||||||||| |||||    
T  14863266 caaaagttgtcccacaaatggttgttcaaataacacacctct 14863307  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26000663 - 26000724
Alignment:
Q  1 tttgtaaat-tatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    ||||||||| ||| ||||||||| ||| |||||| |||||| ||||||||||||||| ||||    
T  26000663 tttgtaaatatatagttgtcccataagatgtcaaccaaatgattgttcaaataacacacctc 26000724  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 29933140 - 29933193
Alignment:
Q  5 taaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactc 58  Q
    |||||||||||||||||| ||||||| || |||||  |||||||||||| ||||    
T  29933140 taaattatggttgtcccataagttgtgaatcaaataattgttcaaataatactc 29933193  T

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Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32843890 - 32843829
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  32843890 tttgtaaagtatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 32843829  T

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Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 34718243 - 34718299
Alignment:
Q  6 aaattatggttgtcccaa-aagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||||||||||| | ||||||||||  ||| |||||||||||||||||||||||    
T  34718243 aaattatggttgtccccataagttgtcaattaaa-ggttgttcaaataacactcctct 34718299  T

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Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36110261 - 36110322
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  36110261 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 36110322  T

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Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 37942851 - 37942802
Alignment:
Q  6 aaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataaca 55  Q
    ||||||||||||||||| ||||||||||  | ||||||||| ||||||||    
T  37942851 aaattatggttgtcccagaagttgtcaatgagatggttgttaaaataaca 37942802  T

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Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38708243 - 38708186
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaat-ggttgttcaaataacact 57  Q
    |||| |||||||||||||| || || ||||||| ||||| ||||||||||||||||||    
T  38708243 tttgcaaattatggttgtcacataaattgtcaatcaaattggttgttcaaataacact 38708186  T

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Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7586111 - 7586051
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctc 61  Q
    |||||||||||| ||||||  | |||||||||   || |||||||||||||||||||||||    
T  7586111 tttgtaaattatagttgtcaaataagttgtcatgaaattggttgttcaaataacactcctc 7586051  T

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Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16327099 - 16327043
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacact 57  Q
    |||||||||||| ||||| |||||| || | || |||||| ||||||||||||||||    
T  16327099 tttgtaaattatagttgttccaaaaattattaatcaaatgattgttcaaataacact 16327043  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29991534 - 29991597
Alignment:
Q  1 tttgtaaattatggttgtcccaa-aagttgtcaaacaaatggttgttcaaataacactcctctat 64  Q
    |||| ||||| |||||||||| | ||||||||||  ||| |||||||||||||||||||||||||    
T  29991534 tttgcaaattttggttgtccccataagttgtcaattaaa-ggttgttcaaataacactcctctat 29991597  T

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Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42110131 - 42110071
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatg-gttgttcaaataacactcct 60  Q
    ||||||||||||| | ||| || |||||||||| |||||  ||||||||||||||||||||    
T  42110131 tttgtaaattatgatcgtcacataagttgtcaaccaaattagttgttcaaataacactcct 42110071  T

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Target: scaffold0532 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11087 - 11148
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    ||||||||||||| ||||| || |||||||||| |||| |||||||||||||||||||||||    
T  11087 tttgtaaattatgattgtcacataagttgtcaaccaaaaggttgttcaaataacactcctct 11148  T

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Target: scaffold0471 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 130 - 191
Alignment:
Q  1 tttgtaaattatggttgtcccaaaagttgtcaaacaaatggttgttcaaataacactcctct 62  Q
    |||||||| ||||||||||  | |||||||||   || ||||||||||||||||||||||||    
T  130 tttgtaaaatatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctct 191  T

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