View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11581_high_36 (Length: 297)

Name: NF11581_high_36
Description: NF11581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11581_high_36
NF11581_high_36
[»] chr4 (21 HSPs)
chr4 (1-287)||(21332460-21332746)
chr4 (1-287)||(10985630-10985915)
chr4 (1-287)||(12885277-12885563)
chr4 (3-287)||(3268331-3268616)
chr4 (1-284)||(12217561-12217838)
chr4 (57-287)||(3270543-3270774)
chr4 (1-284)||(25239695-25239978)
chr4 (1-284)||(17282406-17282689)
chr4 (1-284)||(13861314-13861597)
chr4 (1-208)||(16396182-16396389)
chr4 (1-284)||(45313147-45313429)
chr4 (1-284)||(9901618-9901901)
chr4 (9-265)||(26780739-26780995)
chr4 (1-282)||(8082047-8082328)
chr4 (65-269)||(49402708-49402914)
chr4 (1-284)||(28891910-28892196)
chr4 (92-259)||(15455466-15455633)
chr4 (1-135)||(18284531-18284665)
chr4 (220-284)||(18284661-18284724)
chr4 (142-263)||(34845514-34845635)
chr4 (9-115)||(26778788-26778894)
[»] chr1 (12 HSPs)
chr1 (1-287)||(19442027-19442313)
chr1 (1-287)||(19967335-19967621)
chr1 (1-284)||(9858967-9859255)
chr1 (6-284)||(24973808-24974085)
chr1 (17-277)||(8995371-8995630)
chr1 (6-284)||(21817653-21817937)
chr1 (16-284)||(8990692-8990961)
chr1 (1-269)||(38621819-38622087)
chr1 (144-284)||(22186045-22186185)
chr1 (6-138)||(21815477-21815609)
chr1 (1-179)||(49472311-49472486)
chr1 (181-258)||(21815619-21815696)
[»] chr8 (21 HSPs)
chr8 (1-284)||(18573933-18574220)
chr8 (1-284)||(32008930-32009213)
chr8 (31-287)||(18040427-18040683)
chr8 (4-287)||(2085661-2085945)
chr8 (1-284)||(7999650-7999932)
chr8 (1-284)||(24033762-24034049)
chr8 (3-284)||(41280726-41281008)
chr8 (66-284)||(7454647-7454866)
chr8 (1-284)||(25820717-25821000)
chr8 (97-287)||(10532801-10532992)
chr8 (91-269)||(11709384-11709562)
chr8 (1-280)||(24060562-24060842)
chr8 (1-122)||(17775783-17775903)
chr8 (1-282)||(33273438-33273704)
chr8 (6-284)||(22609414-22609692)
chr8 (9-145)||(10532664-10532800)
chr8 (203-284)||(1788651-1788732)
chr8 (238-287)||(17775705-17775755)
chr8 (3-56)||(7454570-7454623)
chr8 (1-56)||(11709609-11709664)
chr8 (142-206)||(22282161-22282225)
[»] chr7 (17 HSPs)
chr7 (1-284)||(29164849-29165132)
chr7 (1-282)||(30770104-30770384)
chr7 (1-287)||(21802447-21802734)
chr7 (1-287)||(20093533-20093819)
chr7 (1-287)||(9548875-9549171)
chr7 (9-284)||(47295606-47295880)
chr7 (1-287)||(22705602-22705882)
chr7 (9-282)||(18153131-18153404)
chr7 (1-284)||(2249907-2250192)
chr7 (1-268)||(7595367-7595637)
chr7 (1-284)||(21592791-21593076)
chr7 (80-284)||(18185625-18185829)
chr7 (180-286)||(22703894-22704001)
chr7 (1-219)||(30764896-30765114)
chr7 (91-222)||(38612620-38612751)
chr7 (136-284)||(28794078-28794226)
chr7 (16-151)||(21801776-21801911)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-284)||(391459-391744)
scaffold0002 (1-283)||(380763-381045)
[»] chr2 (13 HSPs)
chr2 (2-287)||(25133841-25134136)
chr2 (1-287)||(23755734-23756021)
chr2 (1-287)||(3770257-3770544)
chr2 (16-287)||(41266127-41266399)
chr2 (1-284)||(42534038-42534322)
chr2 (3-284)||(3105204-3105486)
chr2 (10-251)||(26154907-26155148)
chr2 (9-282)||(19092723-19092996)
chr2 (68-284)||(23929797-23930014)
chr2 (1-284)||(27347171-27347452)
chr2 (92-284)||(29568315-29568507)
chr2 (206-287)||(26159154-26159236)
chr2 (1-56)||(23932908-23932963)
[»] scaffold0034 (2 HSPs)
scaffold0034 (66-287)||(47396-47618)
scaffold0034 (1-56)||(56274-56329)
[»] chr6 (29 HSPs)
chr6 (1-284)||(23574394-23574677)
chr6 (17-287)||(4409193-4409464)
chr6 (1-282)||(29094932-29095214)
chr6 (1-287)||(15119636-15119921)
chr6 (1-287)||(8306061-8306343)
chr6 (20-284)||(12738495-12738760)
chr6 (6-277)||(18736007-18736279)
chr6 (70-285)||(7968479-7968695)
chr6 (1-284)||(24438476-24438760)
chr6 (3-284)||(29482591-29482873)
chr6 (5-284)||(14910605-14910885)
chr6 (1-282)||(18728923-18729205)
chr6 (86-284)||(19860052-19860251)
chr6 (1-257)||(15349543-15349800)
chr6 (1-284)||(18258510-18258794)
chr6 (1-208)||(17756933-17757140)
chr6 (66-283)||(18014438-18014656)
chr6 (1-163)||(21508554-21508716)
chr6 (96-282)||(15318989-15319175)
chr6 (153-287)||(18043337-18043472)
chr6 (5-256)||(15369543-15369795)
chr6 (23-229)||(3876374-3876580)
chr6 (111-221)||(23524128-23524238)
chr6 (1-48)||(19857750-19857797)
chr6 (1-57)||(23524248-23524304)
chr6 (9-58)||(18043505-18043554)
chr6 (144-262)||(14480017-14480135)
chr6 (1-51)||(15318894-15318943)
chr6 (66-127)||(14467175-14467236)
[»] scaffold0989 (1 HSPs)
scaffold0989 (6-287)||(1444-1724)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-284)||(16232-16516)
[»] chr5 (20 HSPs)
chr5 (1-284)||(28067940-28068223)
chr5 (6-284)||(23495349-23495626)
chr5 (1-287)||(5931187-5931474)
chr5 (1-287)||(8244508-8244799)
chr5 (1-284)||(5590613-5590896)
chr5 (1-284)||(36712566-36712848)
chr5 (1-268)||(15620108-15620374)
chr5 (6-284)||(20899517-20899795)
chr5 (1-284)||(41037561-41037854)
chr5 (66-263)||(42792503-42792700)
chr5 (1-256)||(33622407-33622664)
chr5 (94-284)||(22922050-22922241)
chr5 (92-284)||(22922645-22922838)
chr5 (117-284)||(38608267-38608435)
chr5 (1-154)||(13537860-13538013)
chr5 (1-213)||(19329840-19330052)
chr5 (10-169)||(22510097-22510256)
chr5 (1-134)||(24095343-24095476)
chr5 (243-284)||(19330050-19330092)
chr5 (144-173)||(31393167-31393196)
[»] scaffold0058 (3 HSPs)
scaffold0058 (32-283)||(1609-1861)
scaffold0058 (133-284)||(15365-15517)
scaffold0058 (1-65)||(15520-15583)
[»] scaffold0150 (1 HSPs)
scaffold0150 (3-283)||(29975-30256)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-284)||(4112-4396)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-281)||(956-1237)
[»] chr3 (10 HSPs)
chr3 (1-214)||(19790346-19790559)
chr3 (1-284)||(22915052-22915334)
chr3 (91-258)||(16853014-16853181)
chr3 (91-284)||(16914706-16914900)
chr3 (204-287)||(1998003-1998087)
chr3 (85-209)||(44635823-44635947)
chr3 (210-284)||(19773386-19773462)
chr3 (65-284)||(3559099-3559317)
chr3 (194-258)||(22006519-22006583)
chr3 (194-258)||(22014036-22014100)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-284)||(151207-151490)
[»] scaffold0362 (1 HSPs)
scaffold0362 (6-284)||(7270-7548)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-284)||(242673-242957)
scaffold0008 (1-284)||(253313-253597)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-269)||(68689-68957)
scaffold0042 (85-269)||(74861-75045)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-258)||(10788-11045)
[»] scaffold0265 (3 HSPs)
scaffold0265 (6-284)||(14872-15156)
scaffold0265 (6-138)||(17200-17332)
scaffold0265 (181-258)||(17113-17190)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-284)||(12323-12604)
[»] scaffold0084 (1 HSPs)
scaffold0084 (9-252)||(54528-54770)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-284)||(37142-37425)
[»] scaffold0111 (1 HSPs)
scaffold0111 (66-284)||(2811-3029)
[»] scaffold0483 (1 HSPs)
scaffold0483 (9-176)||(9243-9406)
[»] scaffold0299 (1 HSPs)
scaffold0299 (198-287)||(19147-19237)
[»] scaffold0025 (1 HSPs)
scaffold0025 (147-284)||(86424-86562)
[»] scaffold0011 (1 HSPs)
scaffold0011 (124-256)||(20323-20455)
[»] scaffold0063 (1 HSPs)
scaffold0063 (92-284)||(36786-36978)
[»] scaffold1272 (1 HSPs)
scaffold1272 (9-60)||(1968-2019)
[»] scaffold0233 (1 HSPs)
scaffold0233 (92-174)||(15998-16082)


Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 21332460 - 21332746
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||||| |||||  ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21332460 atacaattcaaagtccaaacactacgtttggcaaagttacttgcgacacacccctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 21332559  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||  |||||||    
T  21332560 aaccacaacgtctctctacacgttcccacaataaactttctggcggttatacttcccatgatttcgtaagcgccagagccaggtgtgccactacaacggc 21332659  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctctctg 287  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21332660 tctgcagccctccacctctgtaaataggggactcaaagcagtttccaaggtagaatctatctcttcctcaaaccctcactctctctg 21332746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 10985630 - 10985915
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  10985630 atacaatccaaaggtcaaacaccacgtttggcaaagttacttgtgacacac-cctttccccacaagggggtgcacagagcgaacgagactggttcaaacg 10985728  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||   |||||||    
T  10985729 aaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgcgagagccaggtgtgccattacaacggc 10985828  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcct-caaaccctcactctctctg 287  Q
    ||||||||| |||||||||||||||||||||||||  |||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  10985829 tctgcagccatccacctctataaataggggactcacggcag-tcccaaggtagaatctacctcttcctccaaaccctcactctctctg 10985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 12885563 - 12885277
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||| ||| || |||| || | ||||||||||||  ||||||||||||||||||||||||    
T  12885563 atacaatccaaaacccaaacaccacgtttggcaaagttacttgcaacataccccttccc-cgcaagggggtgcatggagcgaaagagactggttcaaacg 12885465  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||   ||| |||    
T  12885464 aaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaatggc 12885365  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||||||||||||||| ||||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  12885364 tctgcagccctccacctttataaataggggactcacaacagtccccaaggtagaatctatctcttcctctaaaccctcaccctctctg 12885277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 3268616 - 3268331
Alignment:
Q  3 acaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacga 101  Q
    |||||||| ||| ||||||||   ||||||||| ||||||| ||||||| |||| ||||||||||||| ||||| |||||| ||||||||||||||||||    
T  3268616 acaatccacagcccaaacaccgattttggcaaaattacttgtgacacacccctt-ccacacaaggggggtgcacggagcgacagagactggttcaaacga 3268518  T
Q  102 accataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggct 201  Q
    |||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||| ||   ||| ||||    
T  3268517 accacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgattacgtaaccgccagagccaggtgtgtcattacaatggct 3268418  T
Q  202 ctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||||||||||||||||||||||||||||||||  | |||  |||||||||||||||||||| |||| ||||||||||||||||||    
T  3268417 ctgcagccctccacctctataaataggggactcacggaagtctccaaggtagaatctatctctccctctaaaccctcactctctctg 3268331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 12217838 - 12217561
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||| ||| |||||||| ||||| ||||| |||||||| |||||| |||| ||||||| |||||||||| |||||| |||||||||||||||||    
T  12217838 atacaatccacagcccaaacaccgcgtttagcaaaattacttgcaacacacccctt-ccacacatgggggtgcacggagcgacagagactggttcaaacg 12217740  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| ||||||||||  |||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| |       |||||||    
T  12217739 aaccacaacgtctctctgcacgttcctgcaataaactctctggcggttacacttcctacgatttcgtaaccgccagagccaggttt------acaacggc 12217646  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||| |||| |||||| ||||||||    
T  12217645 tctgcagccctccacctctataaataggggactcacgacagtccccaaggtagaatctatctctccctctaaacccgcactctct 12217561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 57 - 287
Target Start/End: Complemental strand, 3270774 - 3270543
Alignment:
Q  57 tccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcc 156  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||||| ||||||||  | ||||||||| ||||||||||||| ||||||||||||||    
T  3270774 tccacacaagggggtgcacggagcaacagagactggttcaaacgaaccacaacgtctcactacacgttcccgcaataaactctctagcggttacacttcc 3270675  T
Q  157 catgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaat 256  Q
    || |||||||||||| |||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||    
T  3270674 cacgatttcgtaaccaccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggtaggat 3270575  T
Q  257 ctatctcttcctc-aaaccctcactctctctg 287  Q
    |||||||| |||| ||||||||||||||||||    
T  3270574 ctatctctccctctaaaccctcactctctctg 3270543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 25239978 - 25239695
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacac-aagggggtgcacagagcgaaagagactggttcaaac 99  Q
    ||||| ||||||||  |||||||||||||| |||| ||||| |||||||||  |||| ||| | | |||||||||| || ||||||||||||||||||||    
T  25239978 atacactccaaagcctaaacaccacgtttgacaaaattactcgcgacacacctcttt-cacgcgaggggggtgcacggaacgaaagagactggttcaaac 25239880  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||  || |||||||| ||||||||| |||||||||| | |||||||||||||||||  |||||||||||| |||||| ||||||||||   ||||||    
T  25239879 gaaccccaaagtctctttccacgttcccgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacgg 25239780  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| ||| |  ||||||||||||||||||    
T  25239779 ctctgcagccctccacctctataaataggggactaaatgcagtccccaaggtagaatctttctttctctcaaaccctcactctct 25239695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 17282406 - 17282689
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    ||||| |||||||| || ||||||||||||||||| ||||| ||||||||| |||| |||| | |||||| ||||| || |||||||||||||||| |||    
T  17282406 atacactccaaagcccagacaccacgtttggcaaaattactcgcgacacacccctt-ccacgcgaggggggtgcacggaacgaaagagactggttctaac 17282504  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||  ||||||||||| ||||||||| |||||||| | |  |||||||||||||||| || |||||||||| |||||| ||||||||||   ||||||    
T  17282505 gaaccccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcgtaaccgtcagagtaaggtgtgccattacaacgg 17282604  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctat-ctcttcctcaaaccctcactctct 284  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| || | ||| | ||||||||||||||||||    
T  17282605 ctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaacctttcctcct-ctcaaaccctcactctct 17282689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 13861597 - 13861314
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||| ||||||||| |||||||||||| ||| ||| ||||| ||||||||| |||| |||| | |||||| ||||| || ||||||| || |||||||||    
T  13861597 ataccatccaaagcccaaacaccacgtctggtaaaattactcgcgacacacccctt-ccacgcgaggggggtgcacggaacgaaagataccggttcaaac 13861499  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||  ||||||||||| ||||||||| |||||||||| | ||| ||||||||||||| ||||||||||| |  ||||| ||||||||||   ||||||    
T  13861498 gaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacacttcccacgatttcgtaactgttagagtaaggtgtgccattacaacgg 13861399  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    || ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||| |||  | ||||||||||||||||||    
T  13861398 ctttgcagccctccacctctataaatagggaactcaatgcagtccccaaggtagaatctttcttcttctcaaaccctcactctct 13861314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 16396182 - 16396389
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||| |||| |  ||||||||||||| |    
T  16396182 atacaatccaaagccaaaacaccacgtttggcaaagttacttgcgacacacccctttcc-cacaaggggggtgcacggagcaagcgagactggttcaagc 16396280  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| | ||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||    
T  16396281 gaaccacaacgtctctctacacgttcccgcaataaacactctggcggttacacttcccatgatttcctaatcgccagagtcaggtgtgccactacaacgg 16396380  T
Q  200 ctctgcagc 208  Q
    |||||||||    
T  16396381 ctctgcagc 16396389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 45313429 - 45313147
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaa-agagactggttcaaac 99  Q
    ||||||| |||||| ||| ||||| |||||||||  ||||||||||||||| ||||  | | | || |||||||| ||||||  | ||||||||||||||    
T  45313429 atacaattcaaagcccaagcaccatgtttggcaacattacttgcgacacaccccttctc-cgcgagagggtgcacggagcgagcaaagactggttcaaac 45313331  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||| | ||||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||   ||||||    
T  45313330 gaactacaacgtctctctgcacgttccc-caataatctctctggcggttacacttcccacgatttcgtaaccgccagagcctggtgtgccattacaacgg 45313232  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
     | |||| ||||| ||||||||| | |||| ||||| | |||| |||||||||||||||| ||||| | | |||||||||||||||    
T  45313231 atttgcaaccctctacctctatata-agggaactcataacagtccccaaggtagaatctaactctttcactaaaccctcactctct 45313147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 9901618 - 9901901
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||| ||||| |||| | ||||||||||||  |||||||||||||||  ||| ||   ||||||||||||| ||||||   |||  |||||||| |    
T  9901618 atacaatcaaaagcgcaaatatcacgtttggcaatattacttgcgacacacctcttccctg-caagggggtgcacggagcgagctagatcggttcaaatg 9901716  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| || || ||||| |||||| |||||| |||||||||| ||||| ||||||||||||| ||||| |||||||||||   |||||||    
T  9901717 aaccacaacgtctctctggacattcccgcaataatctctctagcggttacacgtcccacgatttcgtaaccgtcagagccaggtgtgccattacaacggc 9901816  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||||| ||||||||||||||| |||||||||||  |||||| | |||||||||| | || ||| ||||  ||||||||||||||    
T  9901817 tctgcaaccctccacctctatatataggggactcttagcagtcctcaaggtagaaccgatatctccctcttaaccctcactctct 9901901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 9 - 265
Target Start/End: Original strand, 26780739 - 26780995
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataa 108  Q
    |||||| |||||||||||||||||||  |||||||| |||||| ||||  |    | ||||||| |  ||| |||  || | || |||||||||||| ||    
T  26780739 caaagcccaaacaccacgtttggcaacattacttgctacacaccccttctctgtgaggggggtgtagggagagaacaaggccggctcaaacgaaccacaa 26780838  T
Q  109 cgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagc 208  Q
    ||| ||| ||||||||||| |||||| ||||||||||||||||||||||| | |||||||||| |||||||| |||||| ||   |||||||||||||||    
T  26780839 cgtttctctgcacgttcccgcaataatctctctggcggttacacttcccacgttttcgtaaccaccagagtctggtgtgtcattacaacggctctgcagc 26780938  T
Q  209 cctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctctt 265  Q
    ||||||||||| |  |||||||| ||| | |||| |||||||||||||||| |||||    
T  26780939 cctccacctctctgtataggggagtcataacagtccccaaggtagaatctaactctt 26780995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 8082328 - 8082047
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||||| |||||||||||||| ||||  |||||||||||  || ||||| |    |||||||||||| |||| |    ||| ||||||||||    
T  8082328 atacaatccaaagcccaaacaccacgttttgcaacattacttgcgacttaccccttttccgcgaagggggtgcacggagcaagcaggaccggttcaaacg 8082229  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    | ||||||| ||| ||||||||||||| |||| |  |||||||||||||||||| ||| ||||||||||| |   ||  |||||||||||   ||| |||    
T  8082228 agccataacatctatttgcacgttcccgcaattatttctctggcggttacactttccacgatttcgtaactgttggacccaggtgtgccattacaatggc 8082129  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactct 282  Q
    ||||||| |||||||||||||| |||||||||||  |||||| ||||| |||||||||| ||||| ||| |||||||||||||    
T  8082128 tctgcagtcctccacctctatatataggggactcttagcagtccccaatgtagaatcta-ctctttctctaaaccctcactct 8082047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 65 - 269
Target Start/End: Complemental strand, 49402914 - 49402708
Alignment:
Q  65 agggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctcttt--gcacgttcccacaataaactctctggcggttacacttcccatgat 162  Q
    |||||||||||||||| |   |||| |||||||||| || | ||||||||| |  ||||||| || |||||| |||| |||||||||||||| ||| |||    
T  49402914 agggggtgcacagagcaagcaagaccggttcaaacggactacaacgtctctctctgcacgtttccgcaataatctctatggcggttacactttccacgat 49402815  T
Q  163 ttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatct 262  Q
     ||||||||||||||| | |||||||||   ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||| ||||||| ||| |    
T  49402814 ctcgtaaccgccagagcctggtgtgccattacaacggctctgcagccctccacctctatatataggggactcatagcagtccccaaagtagaatatatat 49402715  T
Q  263 cttcctc 269  Q
    || ||||    
T  49402714 ctccctc 49402708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 28892196 - 28891910
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt-tccacacaagggggtgcacagagcgaaagagactggttcaaac 99  Q
    |||||||| |||| |||||||||||||||| |||  |||||||||||| || |||| ||| |  ||||| |||||| |||| |   ||||  ||||||||    
T  28892196 atacaatctaaagttcaaacaccacgtttgccaacattacttgcgacataccccttctccgcg-aagggagtgcacggagcaagcaagacctgttcaaac 28892098  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgcca----gagtcaggtgtgccaccgca 195  Q
    |||||| |||||||||||||||||| ||||||| |  ||||||| |||||||||||||| ||||||| ||| ||||    ||  ||| |||||||   ||    
T  28892097 gaaccacaacgtctctttgcacgtttccacaattatttctctggtggttacacttcccacgatttcgcaactgccaaccggacccagatgtgccattaca 28891998  T
Q  196 acggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    |||||| |||||| ||||||||||||| |||||||||||  |  ||| ||||||||||||||||| |||||||| || |||||||||||    
T  28891997 acggctatgcagctctccacctctatatataggggactcttaagagtccccaaggtagaatctat-tcttcctctaaacctcactctct 28891910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 15455633 - 15455466
Alignment:
Q  92 gttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccac 191  Q
    |||||||||| ||| |||||||||||||||||| |  |||| |  ||||| ||| ||||||||||||| ||||| ||||||||| |  ||||||||||      
T  15455633 gttcaaacgagccacaacgtctctttgcacgtttctgcaattatttctcttgcgtttacacttcccattatttcataaccgccaaacacaggtgtgcctt 15455534  T
Q  192 cgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatcta 259  Q
    | ||||| || |||| ||||||||||||||| |||   |||||  |||||| ||||||||||||||||    
T  15455533 cacaacgactttgcatccctccacctctatatatataagactcttagcagtccccaaggtagaatcta 15455466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18284531 - 18284665
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggg-gtgcacagagcgaaagagactggttcaaac 99  Q
    |||| ||||||||| |||||| ||||||||||||| |||||  |||||||| |||| |||| | ||||| ||||||| |  |||||||||||| ||||||    
T  18284531 ataccatccaaagcccaaacatcacgtttggcaaaattactcacgacacacccctt-ccacgcgaggggagtgcacaaaatgaaagagactgggtcaaac 18284629  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaa 135  Q
    |||||  ||||||| |||  ||||||||||||||||    
T  18284630 gaaccccaacgtcttttttaacgttcccacaataaa 18284665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 18284661 - 18284724
Alignment:
Q  220 ataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||||||||||||| ||||| ||||||||||||||  |||||||||| |||||||||||||||    
T  18284661 ataaataggggactcaatgcagtccccaaggtagaatc--tctcttcctctaaaccctcactctct 18284724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 263
Target Start/End: Original strand, 34845514 - 34845635
Alignment:
Q  142 ggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcag 241  Q
    ||||||||||||||||| ||||||||||||| ||||  || ||||||||   ||||| |||||||  |  ||||||||||| | ||||| |||   ||||    
T  34845514 ggcggttacacttcccacgatttcgtaaccgtcagacacatgtgtgccattacaacgactctgcattcacccacctctatataaagggggctcctcgcag 34845613  T
Q  242 ttcccaaggtagaatctatctc 263  Q
    | ||||||||||||||| ||||    
T  34845614 tccccaaggtagaatctctctc 34845635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 26778788 - 26778894
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt-tccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccata 107  Q
    |||||||||||||||| ||||| |||  ||||||||||| ||| |||| ||| |  | ||||||||||| ||||||  |||| ||||||||||||||| |    
T  26778788 caaagctcaaacaccatgtttgacaacattacttgcgacccaccccttctccgcg-aggggggtgcacatagcgaacaagaccggttcaaacgaaccaca 26778886  T
Q  108 acgtctct 115  Q
    ||||||||    
T  26778887 acgtctct 26778894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 19442027 - 19442313
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  | ||||||||||||||||||||| ||    
T  19442027 atacaatccaaaactcaaacaccacgtttggcaaagttacttgcgacacacccctt-ccacacaagggggtgtgcggagcgaaagagactggttcaatcg 19442125  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||| |||| ||   |||||||    
T  19442126 aaccacaacgtctctctacacgttcccacaataaactctctggcggttatacttcccccgatttcgtaaccgccagagtcagatgtgtcattacaacggc 19442225  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    | |||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  19442226 tttgcagcactccacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 19442313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 19967335 - 19967621
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||| ||||||||  ||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  19967335 atacgatccaaagtccaaacaccacgtttgacaaagttacctgcgacacacccctt-ccacataagggggtgcacggagcgaaagagactggttcaaacg 19967433  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||| ||   ||||||     
T  19967434 aaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacaccacccacgatttcgtaaccgccagagccaggtgtgtcattacaacggt 19967533  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    | |||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||||    
T  19967534 tatgcaaccctccacctctataaataggggactcaaagcagtccctaaggtagaatccatctcttcctctaaaccctcactctctctg 19967621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 9859255 - 9858967
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||||||||||   |||||||||||||||||||| |||||||| |||||| |||||||    | |||||||||||||||||  |||||| |||||||||    
T  9859255 atacaatccaaaatccaaacaccacgtttggcaaacttacttgcaacacacccctttcctgcaaggggggtgcacagagcgagtgagactcgttcaaacg 9859156  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtca----ggtgtgccaccgcaa 196  Q
    ||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||     |||||| ||| |||    
T  9859155 aaccacaacgtctctctgcacgttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgtcagagccaagtgtgtgtgcaaccacaa 9859056  T
Q  197 cggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||| || ||||||||| |||||    
T  9859055 cggctctgcagccctccacctctataaataggggactcatagcagtccccaaggtagaatatatctcttcatctaaaccctcagtctct 9858967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 6 - 284
Target Start/End: Original strand, 24973808 - 24974085
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaacca 105  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||| ||| |||||  |||||||||||||||| |||||||||| ||||||||||||||     
T  24973808 atccaaagcccaaacaccacgttttgcaaaattacttgcgacaca-tcccttccaagcaagggggtgcacagaacgaaagagaccggttcaaacgaacct 24973906  T
Q  106 taacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgc 205  Q
     |||||||||||  || |||||||||||||||| | ||||||||||||||||| ||||||||||||| |||||| ||||||||||   ||||||||||||    
T  24973907 caacgtctctttcaacattcccacaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgc 24974006  T
Q  206 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc--aaaccctcactctct 284  Q
    ||||||| | ||||||||||||||||||||| |||||  |||||||||||||  ||||||||||  |||||||||||||||    
T  24974007 agccctctaactctataaataggggactcaatgcagtcaccaaggtagaatc--tctcttcctctaaaaccctcactctct 24974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 277
Target Start/End: Original strand, 8995371 - 8995630
Alignment:
Q  17 aaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctt 116  Q
    |||||||||||||| |||  |||||||||||| || ||||||| ||| ||||||||||| ||||||  ||||| ||||||| | | ||| |||||||||     
T  8995371 aaacaccacgtttgacaacattacttgcgacatacccctttcc-cacgagggggtgcacggagcgagcgagaccggttcaagcaagccacaacgtctctc 8995469  T
Q  117 tgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacc 216  Q
     |||||||||| ||||||||||| |||||||||||||||||| |||||||||||||| ||||  ||||||| ||   |||||||||||||||||||||||    
T  8995470 agcacgttcccgcaataaactctatggcggttacacttcccacgatttcgtaaccgctagagctaggtgtgtca-atcaacggctctgcagccctccacc 8995568  T
Q  217 tctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctc 277  Q
    |||||||||||||||||||  ||| | |||||||||||||||| ||||||||| ||||||||    
T  8995569 tctataaataggggactcactgcattccccaaggtagaatctaactcttcctctaaaccctc 8995630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 6 - 284
Target Start/End: Original strand, 21817653 - 21817937
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-------tgcacagagcgaaagagactggttcaaa 98  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||| |||| ||||   ||||||       ||||| || |||||||||  ||||||||    
T  21817653 atccaaagcccaaacaccacgtttggcaaaattactcgcgacacacccctt-ccacgtgaggggggggggggtgcacggaacgaaagagatcggttcaaa 21817751  T
Q  99 cgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacg 198  Q
    ||||||  | ||||||||| ||||||||| |||||||||| | ||| ||||||||||||| ||||||||||||| |||||| ||||||||||   |||||    
T  21817752 cgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacg 21817851  T
Q  199 gctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    ||||||| ||| ||||||| |||||||||||||||||| ||||| ||||||||||||||| |||    || |||||||||||||||    
T  21817852 gctctgcggccatccacctttataaataggggactcaatgcagtccccaaggtagaatctttcttcctctaaaaccctcactctct 21817937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 284
Target Start/End: Original strand, 8990692 - 8990961
Alignment:
Q  16 caaacaccacgtttggcaaagttacttgcgacacactcctttccacac-aagggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctc 114  Q
    |||||||| |||||| |||  |||| |||||||| | |||| || ||| ||| |||||||| ||| ||  ||||| ||||||| | | ||| ||||||||    
T  8990692 caaacacctcgtttgacaacattacctgcgacacgccccttccc-cacgaagagggtgcacggagtgagcgagaccggttcaagcaagccacaacgtctc 8990790  T
Q  115 tttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctcca 214  Q
    | ||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||| |||| |||||||||||   |||||||||| ||||||||||    
T  8990791 tctgcacgttctcacaataaactctctgacagttacacttcccacgatttcgtaaccgctagagccaggtgtgccattacaacggctctacagccctcca 8990890  T
Q  215 cctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||| |||||||||||||||  ||||| |||| ||||||||||| ||||||||| |||||||||||||||    
T  8990891 cctctgtaaataggggactcactgcagtccccacggtagaatctaactcttcctctaaaccctcactctct 8990961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 38622087 - 38621819
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||||||||||||||||||| ||||||| || |  |||||||||||| || |||| ||    | |||||| ||| ||||||  ||||  |||| |||||    
T  38622087 atacaatccaaagctcaaacatcacgtttagcgacattacttgcgacataccccttccccgcgaggggggtccacggagcgagcgagatcggttaaaacg 38621988  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| ||||||||||| ||||||| | | |||| ||||||||| ||| |||||||||||| |||||| ||  |||||||   |||||||    
T  38621987 aaccacaacgtctctctgcacgttcccgcaataaattgtttggcagttacactttccacgatttcgtaaccaccagagccaaatgtgccattacaacggc 38621888  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc 269  Q
    |||||||||||||||||||||| ||| ||||||||  ||||| |||||||||||||||  |||||||||    
T  38621887 tctgcagccctccacctctatatataagggactcactgcagtccccaaggtagaatctcactcttcctc 38621819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 144 - 284
Target Start/End: Original strand, 22186045 - 22186185
Alignment:
Q  144 cggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagtt 243  Q
    ||||||||||||||| ||||| ||||||| | |||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| ||||||||     
T  22186045 cggttacacttcccacgattttgtaaccgtccgagtaaggtgtgccattacaacggctctgcagccatccacctctataaataggggacttaaagcagtc 22186144  T
Q  244 cccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    ||||||||||||||| |||    ||||||||||||||||||    
T  22186145 cccaaggtagaatctttcttcctctcaaaccctcactctct 22186185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 21815477 - 21815609
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacgaacc 104  Q
    ||||||| | |||||||||||||||||||| ||||| | ||||||| |||| |||| | |||||| ||||| || |||||||||||||||||||||||||    
T  21815477 atccaaatcccaaacaccacgtttggcaaaattactcgtgacacacccctt-ccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaacc 21815575  T
Q  105 ataacgtctctttgcacgttcccacaataaactc 138  Q
      ||||||||||| ||||||||| ||||||||||    
T  21815576 ccaacgtctctttccacgttcccgcaataaactc 21815609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 49472486 - 49472311
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||| ||||||||  |||||||| |||||| |||| ||||| |||| |||| |||  |||| | ||||||||||| || |||||||||| |||||||| |    
T  49472486 ataccatccaaagtccaaacaccgcgtttgacaaaattactcgcgaaacacccctc-ccacgcgagggggtgcacggaacgaaagagaccggttcaaatg 49472388  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagt 179  Q
    ||||  ||||||||||| ||||||||| |||||||||| |  ||||||| |||  | | ||||||||||||| ||||||    
T  49472387 aaccccaacgtctctttccacgttcccgcaataaactcacatgcggttatact--ctacgatttcgtaaccgtcagagt 49472311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 21815619 - 21815696
Alignment:
Q  181 aggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatct 258  Q
    ||||||||||   |||| |||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||    
T  21815619 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatct 21815696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 5e-99; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 18573933 - 18574220
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||  |||| ||||||| ||||||||||    
T  18573933 atacaatgcaaagcccaaacaccacgtttggcaaagttacttgcgacaca-tcccttccacacaaggggggtgcatggagcaaaagagagtggttcaaac 18574031  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||   ||||||    
T  18574032 gaaccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacgg 18574131  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttccc---aaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||   ||||||||||||||||||||||| |||| ||||||||||    
T  18574132 ctctgcagccctccacctctataaataggggactcaaagcattccccaagaaggtagaatctatctcttcctctaaactctcactctct 18574220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 32008930 - 32009213
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||| ||||| ||||||||||||||| |||||||||||| ||||||| |||| || ||||||||||||||| ||||||||||||||||||||||||    
T  32008930 atacaatcgaaagcccaaacaccacgtttgacaaagttacttgtgacacacccctt-cctcacaagggggtgcacggagcgaaagagactggttcaaacg 32009028  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| | ||||||| ||||||||||| |||||| |||||| ||| |||||||||||| |||||||||||||||||||||||||||||||   |||||||    
T  32009029 aaccacagcgtctctctgcacgttcccgcaataatctctctagcgattacacttcccacgatttcgtaaccgccagagtcaggtgtgccattacaacggc 32009128  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||| |||||||||||||||||||||||||||||||||| | | ||||||||| |||||||||||||||| |||||||||||||||    
T  32009129 tctacagccctccacctctataaataggggactcaaagtactccccaaggtaaaatctatctcttcctctaaaccctcactctct 32009213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 31 - 287
Target Start/End: Original strand, 18040427 - 18040683
Alignment:
Q  31 gcaaagttacttgcgacacactcctttccacacaagg-gggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccac 129  Q
    ||||||||||||| ||||||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||| |    
T  18040427 gcaaagttacttgtgacacacccctt-ccacacaaggtgggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgc 18040525  T
Q  130 aataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggg 229  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||| |||||||||||   ||||||||||||||| ||||||||||||||||||||    
T  18040526 aataaactctatggcggttacacttcccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcagctctccacctctataaataggg 18040625  T
Q  230 gactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||| ||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||    
T  18040626 gactc-aagcagtccccaaggtagaatcaatctcttcctctaaaccttcactctctctg 18040683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 4 - 287
Target Start/End: Original strand, 2085661 - 2085945
Alignment:
Q  4 caatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacgaa 102  Q
    |||| ||||||  ||||||||||||||| |||||||||||| |||||| |||| |||  |||||||| | ||| |||||||||||||| |||||||||||    
T  2085661 caattcaaagcctaaacaccacgtttggaaaagttacttgcaacacacccctt-ccaagcaaggggggtacacggagcgaaagagactagttcaaacgaa 2085759  T
Q  103 ccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctc 202  Q
    ||| || |||||| |||| |||||| ||||||||   |||||  |||||||||||| ||||||||||||||||||| |||||||||||   |||||| ||    
T  2085760 ccacaatgtctctctgcatgttcccgcaataaacgacctggcaattacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacggttc 2085859  T
Q  203 tgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  2085860 tgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 2085945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 7999932 - 7999650
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggg-gtgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||| | | | |||||| ||||||||||| ||||||||||||||| |||| |||||||||| | |||||| |||||| |||||||||||| |||    
T  7999932 atacaatccacaacccgaacaccgcgtttggcaaaattacttgcgacacacccctt-ccacacaaggcgagtgcacggagcgacagagactggttccaac 7999834  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| |||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||   ||||||    
T  7999833 gaaccacaacgtctctctgcatgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgtcattacaacgg 7999734  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
      |||||| |||||||||||||||| ||| ||||||  ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  7999733 --ctgcagtcctccacctctataaacaggagactcacggcagtccccaaggtagaatctatctcttcctctaaaccctcactctct 7999650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 24034049 - 24033762
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||| |  |||||||||||| |||||||||||||||| ||||| ||||||| |||||||||| ||||| |||  || |||||||||||||||    
T  24034049 atacaatccaaatcctaaacaccacgttcggcaaagttacttgcgtcacacccctttcc-cacaaggggggtgcacggagaaaacgagactggttcaaac 24033951  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| || |||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||||   ||||||    
T  24033950 gaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacactttccacgatttcgtaaccgccaaagtcaagtgtgccattacaacgg 24033851  T
Q  200 ctctgcagccctccacct---ctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||| ||||||||||    ||||| ||||||||||| |||||| ||||| |||||||||||||||||||| ||||| |||||||||    
T  24033850 ctctgcaaccctccacctatattataactaggggactcatagcagtccccaatgtagaatctatctcttcctctaaaccttcactctct 24033762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 3 - 284
Target Start/End: Original strand, 41280726 - 41281008
Alignment:
Q  3 acaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg--tgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||| ||||||||| |||||||||  ||||||||||||||| || || | ||||||||||  ||||| ||||||   |||| ||||||||||    
T  41280726 acaatccaaagcccaaacaccatgtttggcaacattacttgcgacacaccccctttcgcacaagggggggtgcacggagcgagcaagaccggttcaaacg 41280825  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    | ||| |||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||   |||||||    
T  41280826 agccacaacg-ctctctgcacgttcccgcaataaactctctggcggttacacttcccacgattttgtaacccccagagtcaggtgtgccattacaacggc 41280924  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||| ||||||||||||||||||||||||||| | |||| |||||||||||||||| | ||||||| ||||| |||||||||    
T  41280925 tctgcagtcctccacctctataaataggggactcataacagtccccaaggtagaatctaac-cttcctcgaaaccttcactctct 41281008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 66 - 284
Target Start/End: Original strand, 7454647 - 7454866
Alignment:
Q  66 gggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttc 165  Q
    |||||||||| ||||||  ||||| |||||| |||| ||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||    
T  7454647 gggggtgcacggagcgagcgagaccggttcatacgagccacaacgtctctatgcacgttcccacaataaactctatgacggttacacttcccacgatttc 7454746  T
Q  166 gtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctctt 265  Q
    ||||||||||||| |||||||||||   |||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  7454747 gtaaccgccagagccaggtgtgccattacaacggctctgcagccttccacctctataaataggggactcatagcagtccccaagttagaatctatctctt 7454846  T
Q  266 cct-caaaccctcactctct 284  Q
    |||  |||||||||||||||    
T  7454847 cctgtaaaccctcactctct 7454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 25821000 - 25820717
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||| ||||||||| |||||||||||||||||||| ||||| |||||| || |||| |     | ||||||||||  | ||||||  || | ||||||||    
T  25821000 ataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacaaacaccttccgtgtgaggggggtgcacgaaacgaaaggaaccgattcaaacg 25820901  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||  ||||||||||| ||||||||  |||||||||| | ||||||||||||||||| ||||||||||||| |||||| ||||||||||   |||||||    
T  25820900 aaccccaacgtctctttccacgttccagcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagtaaggtgtgccattacaacggc 25820801  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    | |||||||||||||||||| ||||||||||||||| ||||| |||| |||||||||| |||    |||||||||| |||||||    
T  25820800 tttgcagccctccacctctaaaaataggggactcaatgcagtccccatggtagaatctttcttcctctcaaacccttactctct 25820717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 97 - 287
Target Start/End: Original strand, 10532801 - 10532992
Alignment:
Q  97 aacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaa 196  Q
    ||||||||| ||||||||| | ||||||||  |||||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||||   |||    
T  10532801 aacgaaccacaacgtctctctccacgttcctgcaataaacaccctggcggttacactttccacgatttcgtaaccgccagagtcaggtgtgccattacaa 10532900  T
Q  197 cggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||||||||||||||||||||||||||||||||||| || | ||| ||||||||||||| ||||||||| || ||||||||| || |||||    
T  10532901 cggctctgcagccctccacctctataaataggggacttaatggagtccccaaggtagaatttatctcttcatctaaaccctcattccctctg 10532992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 91 - 269
Target Start/End: Complemental strand, 11709562 - 11709384
Alignment:
Q  91 ggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgcca 190  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||| | |||||||||    
T  11709562 ggttcaaacgaaccacaacgtctctctgcacgttcccacaataatctctctggcggttacacttcccacgatttcgtaaatgccagagcctggtgtgcca 11709463  T
Q  191 ccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc 269  Q
       ||||||||||||| ||||||||||||||| |||||||||||  |||||| |  ||||||||||| |||||| ||||    
T  11709462 ttacaacggctctgcaaccctccacctctatatataggggactctcagcagtccgaaaggtagaatcgatctctccctc 11709384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 24060842 - 24060562
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggg-ggtgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||||   ||| |||||||| || ||  ||||||||||||||| |||| || | | |||| ||||||| |||| |   |||| ||||| |||    
T  24060842 atacaatccaaagtcgaaataccacgttaggaaacattacttgcgacacaccccttccc-cgcgagggaggtgcacggagcaagcaagaccggttctaac 24060744  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||| ||||| |||| |||||  |||||| ||||||||| ||||||||||| | ||||| ||||||||||||| | ||||||||| | ||||||    
T  24060743 gaaccacaacatctctctgcatgttcctgcaataatctctctggcagttacacttcctacgattttgtaaccgccagagcctggtgtgccatcacaacgg 24060644  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcact 280  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||  ||||||||||||||||| ||||||| |||||||||||    
T  24060643 ctctgcagccctccacctctatatataagggactcttagcagtctccaaggtagaatctatcgcttcctctaaaccctcact 24060562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 17775903 - 17775783
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||||||||||||||||| ||    
T  17775903 atacaatccaaagcccaaacatcacgtttggcaaagttacttgcgacacacccctt-ccacacaagggggtgtacggagcgaaagagactggttcaatcg 17775805  T
Q  101 aaccataacgtctctttgcacg 122  Q
    ||||| ||||||||| ||||||    
T  17775804 aaccacaacgtctctctgcacg 17775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 33273438 - 33273704
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||| ||||||||| |||||||||||||||||||| |||||||| |||||||| | ||| | |||||||| |||   ||||||   |||| |||||||||    
T  33273438 atactatccaaagcccaaacaccacgtttggcaaatttacttgcaacacactcttctcc-cgcaaggggggtgcgaggagcgagcaagaccggttcaaac 33273536  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    || ||| ||||||||| ||||||||||| ||||||  ||| |||||||||||||||||| ||       |||         | ||||||||   ||||||    
T  33273537 gagccacaacgtctctctgcacgttcccgcaataagttctatggcggttacacttcccacga-------acc---------aagtgtgccattacaacgg 33273620  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactct 282  Q
    ||||||| |||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| ||| |||||||||||||    
T  33273621 ctctgcaaccctccacctctataaataggggactcataggagtccccaaggtagaatctatctctttctctaaaccctcactct 33273704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 284
Target Start/End: Original strand, 22609414 - 22609692
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaacca 105  Q
    ||||||||| ||||||||| ||||| |||  ||| |||| ||||| ||| ||||   | ||||||||||| ||||||  |||| ||||||||||||||||    
T  22609414 atccaaagcccaaacaccatgtttgacaacattatttgcaacaca-tcccttccctgcgagggggtgcacggagcgagcgagattggttcaaacgaacca 22609512  T
Q  106 taacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtg--ccaccgcaacggctct 203  Q
      |  ||||| |||| |||| | |||||||||||||| ||||||||| || || ||||||||||||||||||| ||||||||  ||| | ||||| ||||    
T  22609513 cgatatctctctgcatgttcacgcaataaactctctgtcggttacacatctcacgatttcgtaaccgccagagccaggtgtgtaccatcacaacgactct 22609612  T
Q  204 gcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||| ||||||||||||||  ||| |||||||  | || | || ||| ||||||| ||||||||||| |||||||||||||||    
T  22609613 gcaaccctccacctctat--atatgggactcttaacaatcccaaagatagaatcaatctcttcctcaaaaccctcactctct 22609692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 10532664 - 10532800
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacgaaccata 107  Q
    |||||||||||| ||||||||||||||| |||||||| ||||| |||| | |  |||||||| | |||  ||||||||||| |||||||||||||||| |    
T  10532664 caaagctcaaacgccacgtttggcaaagatacttgcggcacaccccttac-atgcaaggggggtacacgaagcgaaagagattggttcaaacgaaccaca 10532762  T
Q  108 acgtctctttgcacgttcccacaataaactctctggcg 145  Q
    |||||||| | ||||||||  |||||||| | ||||||    
T  10532763 acgtctctctccacgttcctgcaataaacaccctggcg 10532800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 1788732 - 1788651
Alignment:
Q  203 tgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    |||||||||||||||||||||||||| ||||||| |||||  |||||||||||||| |||    ||||||||||||||||||    
T  1788732 tgcagccctccacctctataaataggagactcaatgcagtcaccaaggtagaatctttcttcctctcaaaccctcactctct 1788651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 17775755 - 17775705
Alignment:
Q  238 gcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  17775755 gcagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 17775705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 7454570 - 7454623
Alignment:
Q  3 acaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt 56  Q
    |||||||||||| ||||| |||||||||||||| |||||||| |||||| ||||    
T  7454570 acaatccaaagcccaaactccacgtttggcaaacttacttgcaacacacccctt 7454623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11709664 - 11709609
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt 56  Q
    |||||||||||||| |||| |||||||||| |||  ||||||||||||||| ||||    
T  11709664 atacaatccaaagcccaaataccacgtttgacaatattacttgcgacacacccctt 11709609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 22282161 - 22282225
Alignment:
Q  142 ggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgca 206  Q
    |||| ||||||||| || ||||||||||||||||||  || ||||||||   |||||||||||||    
T  22282161 ggcgattacacttctcaagatttcgtaaccgccagacacacgtgtgccattacaacggctctgca 22282225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 8e-98; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 29165132 - 29164849
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  29165132 atacaacccaaagcccaaacaccacgtttggcaaagttacttgtgacacacccctttcc-cacaagggggtgcacggagcgaacgagactggttcaaacg 29165034  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||  | ||||||||||||| ||   |||||||    
T  29165033 aaccacaacgtctctctgcacgttcccgcaataaactctctagcagttacacttcccacgatttcgtaacttctagagtcaggtgtgtcattacaacggc 29164934  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  29164933 tctgcagccgtccacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcctctaaaccctcactctct 29164849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 30770104 - 30770384
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||||| |||||| |||||| |||||||| | |||||||||||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  30770104 atacaattcaaagcccaaacatcacgtttgacgaagttacttgcgacacacccctt-ccacacaagggggtgcacggagcgaaagggactggttcaaacg 30770202  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||| | ||||||||| | ||||||||| ||||||||||| |||| ||||||||| ||| ||||||||||||||||||| |||||||||||   |||||||    
T  30770203 aac-acaacgtctctctacacgttcccgcaataaactctttggcagttacactttccacgatttcgtaaccgccagagccaggtgtgccattacaacggc 30770301  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactct 282  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  30770302 tctgcagcactccacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaccctcactct 30770384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 21802734 - 21802447
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||||||| ||||||||||||||||||||| ||||||||||| | |||||| |||| |||| |||||||| ||||| ||||||| |||||||||||| ||    
T  21802734 atacaatctaaagctcaaacaccacgtttgtcaaagttactttcaacacacgcctt-ccacgcaaggggggtgcacggagcgaaggagactggttcagac 21802636  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| |||| |||| | ||||||||||||| || ||||||||||| | |||||||||||| |||||| |||||||||||   ||||||    
T  21802635 gaaccacaacgtctctctgcaggttctcgcaataaactctctcgctgttacacttcctacgatttcgtaaccaccagagccaggtgtgccattacaacgg 21802536  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  21802535 ctctgtagccctcaacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 21802447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 20093819 - 20093533
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||||  ||||||||||||||| ||||||||||||| ||| || |||| ||||||||| |||||||| |||||| |||||||||||||||||    
T  20093819 atacaatccaaagtccaaacaccacgtttgtcaaagttacttgcaacaaacccctt-ccacacaagagggtgcacggagcgacagagactggttcaaacg 20093721  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| ||||| ||||| |||||| |||| ||| |||||||||||||| |||||||||||||| || | |||||||||||   |||||||    
T  20093720 aaccacaacgtctctctgcacattcccgcaataagctctttggtggttacacttcccacgatttcgtaaccgctagggccaggtgtgccattacaacggc 20093621  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcct-caaaccctcactctctctg 287  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||| ||| ||||||| |||| ||||||    
T  20093620 tctgcagccctccacctctataaataggggactcacggcagtccccaaggtagaaactatctctccctccaaacccgcactttctctg 20093533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 9548875 - 9549171
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtg---------cacagagcgaaagagactg 91  Q
    |||||||||||||| ||||| |||||||||| | ||||||||||||||||| ||||| | |||||||||| |         ||  |||| |  |||||||    
T  9548875 atacaatccaaagcccaaacgccacgtttggtatagttacttgcgacacacccctttacccacaaggggggggggggggggcatggagcaagcgagactg 9548974  T
Q  92 gttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccac 191  Q
    ||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| |    
T  9548975 gttcaaacgaaacacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggtgtgcctc 9549074  T
Q  192 cgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
      |||||||||||||||||||||||| |||||| ||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  9549075 tacaacggctctgcagccctccacctttataaaaaggggactcaaagtagtccccaaggtaaaatctatctcttcctctaaaccctcactctctctg 9549171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 9 - 284
Target Start/End: Original strand, 47295606 - 47295880
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataa 108  Q
    |||||| |||||||||||||||| ||| ||||| ||||||||| || |||||| | ||||||||||| || |||| ||||||||||||||||||||  ||    
T  47295606 caaagcccaaacaccacgtttggaaaaattactcgcgacacac-ccattccacgcgagggggtgcacggaacgaaggagactggttcaaacgaaccccaa 47295704  T
Q  109 cgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagc 208  Q
    ||||||| | ||| ||||| |||||||||| |  ||| |||||||||||| ||||||||||||| |||||| ||||||||||   |||||||||||||||    
T  47295705 cgtctctctccaccttcccgcaataaactcacaagcgtttacacttcccacgatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgcagc 47295804  T
Q  209 cctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||    ||||||||||||||||||    
T  47295805 cctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcactctct 47295880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 22705882 - 22705602
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagg-gggtgcacagagcgaaagagactggttcaaac 99  Q
    ||||||||||||| || ||||||||||||| ||||||||||||| |||||| |||| |||  ||||| |||||||| |||||||||||||| ||||||||    
T  22705882 atacaatccaaag-tccaacaccacgtttgacaaagttacttgcaacacacccctt-ccatgcaaggcgggtgcacggagcgaaagagactagttcaaac 22705785  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||| ||| ||||||||||  ||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||   ||| ||    
T  22705784 gaaccacaacgtttctctgcacgttcctgcaataaattctctaccggttacacttcccatgatttcgtaaccgccagagccaggtgtgccattacaatgg 22705685  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    |||||||| |||||||||||||||||| |||||||| |       ||||||||||||||||||||||||| ||||||||||||||||||    
T  22705684 ctctgcagtcctccacctctataaatacgggactcaca------accaaggtagaatctatctcttcctctaaaccctcactctctctg 22705602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 282
Target Start/End: Complemental strand, 18153404 - 18153131
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacgaaccata 107  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||| |||| |||| | |||||| ||||| || | |||||||||||||||||||||||  |    
T  18153404 caaagcccaaacaccatgtttggcaaaattactcgcgacacacccctt-ccacgcgaggggggtgcacggaacaaaagagactggttcaaacgaacccca 18153306  T
Q  108 acgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcag 207  Q
    |||||||||| |||||||||||||||||||| | |||||||||||||||||  |||||||||||| |||||| || |||||||   ||||| ||| ||||    
T  18153305 acgtctctttccacgttcccacaataaactcgcaggcggttacacttcccaccatttcgtaaccgtcagagtaagctgtgccattacaacgactcggcag 18153206  T
Q  208 ccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactct 282  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||    ||||||||||||||||    
T  18153205 ccctccacctctataaataggggactcaatgcattccccaaggtagaatctttcttcctctcaaaccctcactct 18153131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 2249907 - 2250192
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    ||||||| ||||||||||| ||||||||||||||  ||||||||||||||| |||| || | |||||||| ||||| |||| |   ||||||||||||||    
T  2249907 atacaattcaaagctcaaataccacgtttggcaacattacttgcgacacaccccttccc-cgcaaggggggtgcacggagcaagcaagactggttcaaac 2250005  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| ||||||||||| ||||||  ||||| ||||||||| |||||| ||||| |||||||||| || | |||||||||   ||||||    
T  2250006 gaaccacaacgtctctctgcacgttcccgcaataatatctctagcggttacaattcccacgattttgtaaccgccaaagcctggtgtgccattacaacgg 2250105  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc--aaaccctcactctct 284  Q
    ||||||| ||||||||||||||| |||||||||||| ||||   ||||| ||||||||||||||||||||  |||| ||||||||||    
T  2250106 ctctgcaaccctccacctctatatataggggactcatagcaaaccccaatgtagaatctatctcttcctctaaaactctcactctct 2250192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 7595637 - 7595367
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttcc-acacaaggggg---tgcacagagcgaaagagactggttca 96  Q
    ||||||| ||||||| |||||||||| |||||||| |||||||| |||||| |||| || |||  ||||||   ||||| ||||||  ||||| ||||||    
T  7595637 atacaattcaaagcttaaacaccacgcttggcaaacttacttgcaacacaccccttccccacaggaggggggggtgcacggagcgagcgagaccggttca 7595538  T
Q  97 aacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaa 196  Q
    ||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |||| | ||||||||| |   |||    
T  7595537 aacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaacatccagcgccaggtgtgctattacaa 7595438  T
Q  197 cggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcct 268  Q
    ||||| ||||||||||||||||||||||||||||| |||   |||  |||||||||||||||||||||||||    
T  7595437 cggctttgcagccctccacctctataaataggggaatcatgacag-acccaaggtagaatctatctcttcct 7595367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 21592791 - 21593076
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg---tgcacagagcgaaagagactggttcaa 97  Q
    |||| ||||||||  ||||||||| ||||||| || ||||| ||||||||| |||| |||| | ||||||   ||||| || ||||||||||||||||||    
T  21592791 ataccatccaaagtccaaacaccatgtttggctaaattactcgcgacacacccctt-ccacgcgaggggggggtgcacggaacgaaagagactggttcaa 21592889  T
Q  98 acgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaac 197  Q
    |||||||  ||||||||||| |||||||||  ||||| ||  | | ||||||||||||||| ||||| ||||||| |||||| ||||||||||   ||||    
T  21592890 acgaaccccaacgtctctttccacgttcccgtaataagctaacagacggttacacttcccacgattttgtaaccgtcagagtaaggtgtgccattacaac 21592989  T
Q  198 ggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| || |||    || |||||||||||||||    
T  21592990 ggctcagcagccctccacctctataaataggggactcaatgcagtccccaaggtagaagctttcttcctctaaaaccctcactctct 21593076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 80 - 284
Target Start/End: Complemental strand, 18185829 - 18185625
Alignment:
Q  80 cgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagt 179  Q
    |||||||||||||||||||||||||  ||||||||||| || |||||| |||||||||| |  |||||||||||||||  ||||||||||||| ||||||    
T  18185829 cgaaagagactggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcgcaagcggttacacttcccgcgatttcgtaaccgtcagagt 18185730  T
Q  180 caggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcac 279  Q
     |||||||||     ||||||||||||||||||||| | ||| |||||||||||||| ||||| ||||  ||||||||| |||    |||||||||||||    
T  18185729 aaggtgtgccgttaaaacggctctgcagccctccacatttattaataggggactcaatgcagtccccagcgtagaatctttcttcctctcaaaccctcac 18185630  T
Q  280 tctct 284  Q
    |||||    
T  18185629 tctct 18185625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 22704001 - 22703894
Alignment:
Q  180 caggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctca 278  Q
    |||||||||||   ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| ||||| |||||||||    
T  22704001 caggtgtgccattacaacggctctgcagccctccacctctataaatatgggactcacagcagtccccaaggtagaatctatctcgtcctctaaaccctca 22703902  T
Q  279 ctctctct 286  Q
    ||||||||    
T  22703901 ctctctct 22703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 30764896 - 30765114
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggg-gtgcacagagcgaaagagactggttcaaac 99  Q
    ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||  | | | ||||| ||||||||||| |    ||||||||||| |    
T  30764896 atacaatcccaagcttaaactccacgtttggcaaatttacttgcgacataccccttcac-cgcgaggggagtgcacagagcaagcaggactggttcaagc 30764994  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| || |||||||||||| ||||| |||| |  |||||||||||||||||||||| ||||||||| ||| | ||   |||||||||||  |||| |    
T  30764995 gaaccacaatgtctctttgcacattcccgcaattatttctctggcggttacacttcccacgatttcgtacccgtcggacctaggtgtgccactacaacag 30765094  T
Q  200 ctctgcagccctccacctct 219  Q
    ||||||||||||||||||||    
T  30765095 ctctgcagccctccacctct 30765114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 38612751 - 38612620
Alignment:
Q  91 ggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgcca 190  Q
    ||||||||||||||| |||||| || |||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||| | ||||| |||    
T  38612751 ggttcaaacgaaccacaacgtccctctgcacgttcccacaataatctctctggcagttacacttcccacgattttgtaaccgccagagcctggtgtacca 38612652  T
Q  191 ccgcaacggctctgcagccctccacctctata 222  Q
       ||||||||||||||  |||||||||||||    
T  38612651 ttacaacggctctgcagatctccacctctata 38612620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 284
Target Start/End: Original strand, 28794078 - 28794226
Alignment:
Q  136 ctctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactca 235  Q
    ||||||||||||||||||||||| ||||||||||||| ||||  || ||||||||   |||||||| |||||||   ||||| |||| |||||||||||     
T  28794078 ctctctggcggttacacttcccacgatttcgtaaccgtcagacacacgtgtgccattacaacggctatgcagccactcacctttatatataggggactct 28794177  T
Q  236 aagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
     | |||| ||||||||||||||||| ||| |||| ||||||||| |||||    
T  28794178 taacagtccccaaggtagaatctat-tctccctctaaaccctcattctct 28794226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 21801776 - 21801911
Alignment:
Q  16 caaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctct 115  Q
    |||||||||||||||| ||| |||||||| |||||||||| |||    | ||||||| |  ||||||   |||| | ||||||||||||| |||||||||    
T  21801776 caaacaccacgtttggaaaacttacttgcaacacactcctctcctgcaaggggggtgtaaggagcgagcaagaccgattcaaacgaaccacaacgtctct 21801875  T
Q  116 ttgcacgttcccacaataaactctctggcggttaca 151  Q
     ||||||||||| ||||||  |||||||||||||||    
T  21801876 ctgcacgttcccgcaataagttctctggcggttaca 21801911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 391744 - 391459
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg--tgcacagagcgaaagagactggttcaaa 98  Q
    |||||||||||| | ||||||||||| |||||||| |||||||| |||||| ||||||| | ||||||||  ||||| ||||||  |||||| |||||||    
T  391744 atacaatccaaaccccaaacaccacggttggcaaacttacttgcaacacacccctttcc-cgcaagggggggtgcacggagcgagcgagactagttcaaa 391646  T
Q  99 cgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacg 198  Q
    ||||||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||   |||||    
T  391645 cgaaccacaacgtctctctgcaggttcccgcaataaactctctggcggttacacttcccataatttcgtaaccgccagagccaggtgtgccattacaacg 391546  T
Q  199 gctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  391545 gctctgcaaccctccacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcctctaaaccctcactctct 391459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 381045 - 380763
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||||| ||||||||| | |||||||| ||||||||  ||||| |||||||    | |||||||||| ||||||  ||||||||||||||||    
T  381045 atacaatccaaagcccaaacaccatggttggcaaacttacttgcaccacacccctttcctgcaaggggggtgcacggagcgagcgagactggttcaaacg 380946  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| | ||||||||| ||||||| ||||||||||||||||||| ||  ||||||||||| |||||| |||||||||||   |||||||    
T  380945 aaccacaacgtctctctacacgttcccgcaataaagtctctggcggttacacttctcacaatttcgtaacctccagagccaggtgtgccattacaacggc 380846  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctc 283  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||| |||||||||||||||| ||||||||||||||    
T  380845 tctgcagccctccacctctataaataggggactcatagcagtccccatggta-aatctatctcttcctctaaaccctcactctc 380763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 5e-90; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 25133841 - 25134136
Alignment:
Q  2 tacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg---------tgcacagagcgaaagagactgg 92  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||  | | |||||         ||||| |||| |  ||||||||    
T  25133841 tacaatccaaagcccaaacaccacgtttggcaaagttacttgcgacacacccctttcctaaaaggggggggtggggggtgcacggagcaagcgagactgg 25133940  T
Q  93 ttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccacc 192  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||     
T  25133941 ttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacacttaccacgatttcgtaaccgccagagccaggtgtgccact 25134040  T
Q  193 gcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||| ||| ||||||||    
T  25134041 acaacggctctgcagccctccacctctataaataggggactcatagcagtccctaaggtagaatctatctcttcctctaaaccatcattctctctg 25134136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 23755734 - 23756021
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||||| ||||||||| |||||| |||||||||||| |||||| |||| |||  |||||||| ||||| ||||||||| ||||||||||||     
T  23755734 atacaatccaaagcccaaacaccatgtttggtaaagttacttgcaacacacccctt-ccaagcaaggggggtgcacggagcgaaagtgactggttcaaaa 23755832  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||| |||| |||||||||||   ||||||    
T  23755833 gaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgatttcgtaaccgctagagccaggtgtgccattacaacgg 23755932  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    |||| ||||| ||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  23755933 ctctacagccttccacctctataaataggggactcacaacagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 23756021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 3770544 - 3770257
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| |||||| |||| |||| |||||||| ||||  |||||| ||||||||||||||||    
T  3770544 atacaattcaaagcccaaacaccacgtttggcaaagttacttgcaacacacccctt-ccactcaaggggggtgcatggagcgagagagactggttcaaac 3770446  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||  ||||||||| |||||||| || ||||||||||||| |||||||||||| ||| ||||| ||||||||||||| |||||||||||   ||||||    
T  3770445 gaacctcaacgtctctctgcacgtttccgcaataaactctctagcggttacactttccacgattttgtaaccgccagagccaggtgtgccattacaacgg 3770346  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcc-tcaaaccctcactctctctg 287  Q
    |||||||||||||||||||||||||||||||| ||| | |||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  3770345 ctctgcagccctccacctctataaataggggattcacaacagtccccaaggtagaatctatctcttcctttaaaccctcactctctctg 3770257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 16 - 287
Target Start/End: Original strand, 41266127 - 41266399
Alignment:
Q  16 caaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctct 115  Q
    ||||||||| ||||||||||||||||||| |||| | || || ||  ||| ||||||||| ||||||| | ||||||||||||||||||| |||||||||    
T  41266127 caaacaccatgtttggcaaagttacttgcaacaccccccctttcaggcaatggggtgcacggagcgaa-gtgactggttcaaacgaaccacaacgtctct 41266225  T
Q  116 ttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccac 215  Q
     ||||||||||| |||||||||||| |||||||||||||| || ||| ||||||||||||||| |||||||||||   ||||||||||||||||||||||    
T  41266226 ctgcacgttcccgcaataaactctcgggcggttacacttctcacgatatcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccac 41266325  T
Q  216 ctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc--aaaccctcactctctctg 287  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  41266326 ctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaaccctcactctctctg 41266399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 42534038 - 42534322
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||||| ||||||||||||||| |||  ||||||||||||| | ||||||| |||||||||| |||||  |||||  |||||  ||||||||    
T  42534038 atacaatccaaagcccaaacaccacgtttgtcaaccttacttgcgacactcccctttcc-cacaaggggggtgcacgtagcgagcgagacctgttcaaac 42534136  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    || ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||   ||||||    
T  42534137 gagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagatgtgccattacaacgg 42534236  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| ||| | |||||||||||||||    
T  42534237 ctctgcagccctccacctctataaataggggactcatagcagtccccaaggtagaatctaactcctccgctaaaccctcactctct 42534322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 3 - 284
Target Start/End: Complemental strand, 3105486 - 3105204
Alignment:
Q  3 acaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaa 102  Q
    |||||||||||| ||||||||||||||| |||  ||||||||||||||| || || | |||||||| |||||||||||||  ||||| |||||||||||     
T  3105486 acaatccaaagcccaaacaccacgtttgacaacattacttgcgacacaccccctttcccacaagggagtgcacagagcgagcgagaccggttcaaacgag 3105387  T
Q  103 ccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctc 202  Q
    ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||   ||||| ||||||| ||   |||||||||    
T  3105386 ccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcataaccatgagagttaggtgtgtcattacaacggctc 3105287  T
Q  203 tgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    | ||  |||||||||||||||||| |||||||| |||||| |||||||||||||||| ||||||||| ||| |||||||||||    
T  3105286 tacaatcctccacctctataaatatgggactcatagcagtccccaaggtagaatctaactcttcctctaaaacctcactctct 3105204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 251
Target Start/End: Original strand, 26154907 - 26155148
Alignment:
Q  10 aaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacgaaccataa 108  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||| | |||||||||||||| ||    
T  26154907 aaagttcaaacaccacgtttggcaaagttacttgcgacaca-tcccttccacacaaggggggtgcacggagcgaaagagattagttcaaacgaaccacaa 26155005  T
Q  109 cgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagc 208  Q
    | |||||||| |||||||| |||||||| ||||||||||||||||||||| |||||||||||| ||| || |||||||||||    ||||||| ||||||    
T  26155006 catctctttgtacgttcccgcaataaacgctctggcggttacacttcccacgatttcgtaaccaccatagccaggtgtgccattataacggctatgcagc 26155105  T
Q  209 cctccacctctataaataggggactcaaagcagttcccaaggt 251  Q
    |||||||||||||||||||||||||| || |||| ||| ||||    
T  26155106 cctccacctctataaataggggactccaatcagtccccgaggt 26155148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 282
Target Start/End: Complemental strand, 19092996 - 19092723
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataa 108  Q
    |||||| ||||||||| |||||| ||  |||||||||||||| ||| |||  ||| ||||||||||| |||||||  ||||| |||||||||||||| ||    
T  19092996 caaagcccaaacaccatgtttggtaacattacttgcgacaca-tcccttctccacgagggggtgcacggagcgaacaagactagttcaaacgaaccacaa 19092898  T
Q  109 cgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagc 208  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||||  | |||| |||||| |||||| |||||| ||   |||||||||||||||    
T  19092897 cgtctctctgcacgttcccgcaataatctctctggcggttacacttcccacaagttcgaaaccgcgagagtctggtgtgtcattacaacggctctgcagc 19092798  T
Q  209 cctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactct 282  Q
    || ||||||||||| |||||||||||| |||||| |||||||||| || |||||||||||| |||||||| ||||    
T  19092797 cccccacctctatatataggggactcatagcagtccccaaggtaggatttatctcttcctctaaaccctctctct 19092723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 68 - 284
Target Start/End: Complemental strand, 23930014 - 23929797
Alignment:
Q  68 gggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgt 167  Q
    |||||||| ||||||  ||||| |||||||| |||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||| |||| |||    
T  23930014 gggtgcacggagcgagcgagaccggttcaaatgaaccacaatgtctctctgcacgttcccacaataaactctccggcggttacacttcccacgattccgt 23929915  T
Q  168 aaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcc 267  Q
    ||||||||||| |||||||||||   |||||||||||||||||||||||||| || ||||||||||||  ||||| ||||||||| |||||| |||||||    
T  23929914 aaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctttatataggggactcactgcagtccccaaggtaaaatctaactcttcc 23929815  T
Q  268 tc-aaaccctcactctct 284  Q
    || |||||||||||||||    
T  23929814 tctaaaccctcactctct 23929797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 27347452 - 27347171
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||| ||||||||| |||||| ||||||||||||| ||||| ||||||||| |||| |||    |||||||||||| | |||||||||||||||||||||    
T  27347452 ataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacacccctt-ccatgagagggggtgcacataacgaaagagactggttcaaacg 27347354  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||  ||||||||||| ||||||||| ||||||||||   ||| ||||||||||||||||||||||||||| ||| || ||||||||||   |||||||    
T  27347353 aaccccaacgtctctttccacgttcccgcaataaactcataggcagttacacttcccatgatttcgtaaccgtcagtgttaggtgtgccattacaacggc 27347254  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    | || |||||||||| |||||| |||||||| |||| ||||| ||||||||||||||  |||||||||| ||||| |||||||||    
T  27347253 tttgtagccctccacgtctatacataggggattcaatgcagtccccaaggtagaatc--tctcttcctcaaaaccatcactctct 27347171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 92 - 284
Target Start/End: Complemental strand, 29568507 - 29568315
Alignment:
Q  92 gttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccac 191  Q
    |||||||||| ||| ||||||||| | ||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||| |||     
T  29568507 gttcaaacgagccacaacgtctctctacacgttccg-caataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggtgtaccat 29568409  T
Q  192 cgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
      ||||||||||| |||||||||||||||||||| ||||||||| ||||    ||||| |||||||||| |||||||| |||||||||||||||    
T  29568408 tacaacggctctgtagccctccacctctataaattggggactcatagcaaccgccaagttagaatctatgtcttcctctaaaccctcactctct 29568315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 26159154 - 26159236
Alignment:
Q  206 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26159154 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctctaaaccctcactctctctg 26159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23932963 - 23932908
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt 56  Q
    |||||||||||||| |||||||||||| || |||  ||||||||||||||| ||||    
T  23932963 atacaatccaaagcccaaacaccacgtctgacaacattacttgcgacacacccctt 23932908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 66 - 287
Target Start/End: Original strand, 47396 - 47618
Alignment:
Q  66 gggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttc 165  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||     
T  47396 gggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacaatttt 47495  T
Q  166 gtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctctt 265  Q
    ||||||||||||| || ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47496 gtaaccgccagagccaagtgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcagtccccaaggtagaatctatctctt 47595  T
Q  266 cctc-aaaccctcactctctctg 287  Q
    |||| ||||||||||||||||||    
T  47596 cctctaaaccctcactctctctg 47618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 56274 - 56329
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt 56  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  56274 atacaatccaaagcccaaacaccacgtttggcgaagttacttgcgacacacccctt 56329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 7e-86; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 23574677 - 23574394
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||| || |||| ||||||| |||||||| |||||| ||||||| ||||||||||||||||    
T  23574677 atacaatccaaagcccaaacaccacgtttgacaaagttacttgtgatacacccctttcc-cacaagggcgtgcacggagcgaacgagactggttcaaacg 23574579  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||| | || |||| | ||||||||||||||| |||||||||| ||| || |||||||| ||||||| || ||||||||   |||||||    
T  23574578 aaccacaacgtctctctacatgttctcgcaataaactctctggtggttacactttccacgacttcgtaacagccagagccaagtgtgccattacaacggc 23574479  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||    
T  23574478 tctgcagccctctacctctataaataggggactcaaagcagtccacaaggtagaatctatctcttcctctaaaccctcactctct 23574394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 17 - 287
Target Start/End: Complemental strand, 4409464 - 4409193
Alignment:
Q  17 aaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacgaaccataacgtctct 115  Q
    |||||||||||||| |||||||||||| ||||||| |||||| || |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  4409464 aaacaccacgtttgacaaagttacttgtgacacacccctttc-acgcaaggggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctct 4409366  T
Q  116 ttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccac 215  Q
     ||||||||||| |||||||| | || ||||||||||||| || ||||| |||||||||||||  ||||||||||  | ||||||| |||||||||||||    
T  4409365 atgcacgttcccgcaataaacgccctagcggttacacttctcacgattttgtaaccgccagagcaaggtgtgccattgtaacggctttgcagccctccac 4409266  T
Q  216 ctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    |||||||||||| ||| |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  4409265 ctctataaatagaggattcaatgcagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 4409193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 29094932 - 29095214
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg--tgcacagagcgaaagagactggttcaaa 98  Q
    |||| ||||||||| |||||||||||||||||||| ||||| ||||||||| |||| |||| | ||||||  ||||| || |||||||||| ||||||||    
T  29094932 ataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacacccctt-ccacgcgagggggggtgcacggaacgaaagagaccggttcaaa 29095030  T
Q  99 cgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacg 198  Q
    ||||||  ||||||||||| ||||||||| |||||||||| | ||||||||||||||||| ||||||||||||| |||||| ||||||||||   |||||    
T  29095031 cgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacg 29095130  T
Q  199 gctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactct 282  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||    ||||||||||||||||    
T  29095131 gctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcactct 29095214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 15119636 - 15119921
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggg-gtgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||| ||| ||||||||||||||| |||||||||||  ||||||| |||| |||||||||||| |||||||||| ||||||||| |||||||||    
T  15119636 atacaatccagagcccaaacaccacgtttgacaaagttacttatgacacacccctt-ccacacaaggggggtgcacagagtgaaagagacaggttcaaac 15119734  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| ||||||||||| ||||||||||||| ||||||| |||||||| ||||| ||||||||||||| |||||||||||   ||  ||    
T  15119735 gaaccacaacgtctctctgcacgttcccgcaataaactctctagcggttatacttcccacgattttgtaaccgccagagccaggtgtgccattacactgg 15119834  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||||| | |||||||||||||||||||||||||||  || | ||||||||||||||||||||||| || |||||| |||||||||||    
T  15119835 ctctgcaactctccacctctataaataggggactcaa--caatccccaaggtagaatctatctcttcatctaaacccccactctctctg 15119921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 8306343 - 8306061
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||| ||| ||||| |||||| |||||||| ||||||||||||| |||  | |||||| | |||||| ||||||||||||||||||||||||||||||||    
T  8306343 atacgatctaaagcccaaacatcacgtttgacaaagttacttgcaacatccccctttc-agacaaggaggtgcacagagcgaaagagactggttcaaacg 8306245  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    |  || ||||||||| || | |||||| |||||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||   |||||||    
T  8306244 agtcacaacgtctctctgtaggttcccgcaataaactctctggcggttacactttccatgatttcataactgctagagtcaggtgtgccattacaacggc 8306145  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||    ||||||||||| ||||||||||||||||||    
T  8306144 tctgcaaccctccacctctataaataggggactcacagcagtccccaaggtaga----atctcttcctctaaaccctcactctctctg 8306061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 20 - 284
Target Start/End: Complemental strand, 12738760 - 12738495
Alignment:
Q  20 caccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacgaaccataacgtctctttg 118  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||||||| || || |||||||  ||||| |||||||||||||| ||||||||| ||    
T  12738760 caccacgtttggcaaagttacctgcgacacacccctttcc-cacaaggggggtgtacggagcgaacaagactagttcaaacgaaccacaacgtctctctg 12738662  T
Q  119 cacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctc 218  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||||| || || || ||| |||||||   ||||||||||||| |||||||||||    
T  12738661 cacgttcccgcaataaactctctagaggttacacttcccacgatttcgtaatcgtcatagccagatgtgccattacaacggctctgcaaccctccacctc 12738562  T
Q  219 tataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||||| |||||| ||||||||    
T  12738561 tataaataggggactcatagcagtcccctaggtagaatctatctcttcctctaaacccccactctct 12738495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 6 - 277
Target Start/End: Complemental strand, 18736279 - 18736007
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaag-ggggtgcacagagcgaaagagactggttcaaacgaacc 104  Q
    ||||||||| |||||||||||||||||||| |||||||| | | || ||||||| | |||| ||||||||| ||||||  |||| |||||||||||| ||    
T  18736279 atccaaagcccaaacaccacgtttggcaaacttacttgcaatatacccctttcc-cgcaagaggggtgcacggagcgagcgagattggttcaaacgagcc 18736181  T
Q  105 ataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctg 204  Q
    | ||||||||| | ||||||||| ||||||||||||||||| ||| ||||||||  |||||||||||||||||| |||||||||||   ||||||||| |    
T  18736180 acaacgtctctctacacgttcccgcaataaactctctggcgattagacttcccacaatttcgtaaccgccagagccaggtgtgccattacaacggctcag 18736081  T
Q  205 cagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctc 277  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| |||||| |||||||||||| ||||||||    
T  18736080 cagccctccacctctataaataggggactcatagcagtccccaagctagaatttatctcttcctctaaaccctc 18736007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 70 - 285
Target Start/End: Original strand, 7968479 - 7968695
Alignment:
Q  70 gtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaa 169  Q
    |||||| || |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||| |||  |||||||||    
T  7968479 gtgcacggaacgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaaccccctggcggttacactttccacaatttcgtaa 7968578  T
Q  170 ccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc 269  Q
    |||||||||||||||||||||   |||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||| ||||||    
T  7968579 ccgccagagtcaggtgtgccattacaacagctctgcagccctccacctctatatataggggactcaatgcagtccccaaggcagaatctatcttttcctc 7968678  T
Q  270 -aaaccctcactctctc 285  Q
      |||||||||||||||    
T  7968679 ttaaccctcactctctc 7968695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 24438476 - 24438760
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtg--cacagagcgaaagagactggttcaaa 98  Q
    ||||||||||||| ||||||||||| |||||| | ||||||||| |||||| |||| |||| ||||||||||  ||| | | |||||||| |||||||||    
T  24438476 atacaatccaaagttcaaacaccacatttggctatgttacttgcaacacacccctt-ccacgcaagggggtgtgcacggggagaaagagattggttcaaa 24438574  T
Q  99 cgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacg 198  Q
    ||||||| | ||||||||||||||||||  |||| |||||| |||||||||||||||||| |||||||||||||| |||| |||||||| ||   |||||    
T  24438575 cgaaccacatcgtctctttgcacgttcctgcaatcaactctatggcggttacacttcccacgatttcgtaaccgcaagagccaggtgtgtcattacaacg 24438674  T
Q  199 gctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
     |||||||  |||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  24438675 actctgcaatcctctacctctataaataggggactcacagcag-tcccaaggtataatctatctcttcctctaaaccctcactctct 24438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 284
Target Start/End: Complemental strand, 29482873 - 29482591
Alignment:
Q  3 acaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaa 102  Q
    |||||||||||| ||||| |||||||||||||  ||||||||||||||| ||||| | ||||| | | ||||| ||||||  ||||| |||||||||||     
T  29482873 acaatccaaagcccaaacgccacgtttggcaacattacttgcgacacaccccttttcccacaaagtgctgcacggagcgagcgagaccggttcaaacgag 29482774  T
Q  103 ccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctc 202  Q
    ||| ||||||||| |||| |||||| |||||||||||||  | |||| |||||||| |||||||||||||| |||  |||||||||||   ||||| |||    
T  29482773 ccacaacgtctctctgcatgttcccgcaataaactctctcacagttatacttcccacgatttcgtaaccgctagaaccaggtgtgccattacaacgactc 29482674  T
Q  203 tgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    | ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||| ||||||||    
T  29482673 tacagccctccacctctataaataggggactcatagtagtccccaaggtagaatctatctcttcctctaaacccccactctct 29482591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 284
Target Start/End: Complemental strand, 14910885 - 14910605
Alignment:
Q  5 aatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaacc 104  Q
    |||||||||  |||||||||| ||||||||  ||| ||||||||||| |||| || || | |||||||||| ||||||   |||| ||||||||||||||    
T  14910885 aatccaaagtccaaacaccacatttggcaacattatttgcgacacaccccttccc-caaatgggggtgcacggagcgagcaagaccggttcaaacgaacc 14910787  T
Q  105 ataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctg 204  Q
    | ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||  |||||||||| |||||||  | ||||||||   |||||||| ||    
T  14910786 acaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacaatttcgtaactgccagagcgatgtgtgccattacaacggctttg 14910687  T
Q  205 cagccctccacctctataaataggggactcaaagcagttcccaaggtag-aatctatctcttcctc-aaaccctcactctct 284  Q
    |||||||||||||||||| ||||||||||||  ||||| |||||||||| |||||| ||||||||| |||||||||||||||    
T  14910686 cagccctccacctctatatataggggactcactgcagtccccaaggtagaaatctagctcttcctctaaaccctcactctct 14910605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 18729205 - 18728923
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagg-gggtgcacagagcgaaagagactggttcaaac 99  Q
    |||| ||||||| | ||||||||||||||| |||| |||||||  ||||||  |||||| | ||||| |||||||| ||||||| ||||| ||||||||     
T  18729205 atactatccaaaacccaaacaccacgtttgacaaacttacttgtaacacaccgctttcc-cgcaaggagggtgcacggagcgaacgagaccggttcaaag 18729107  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    || ||| ||||||||| |||||||| || ||||||||||| |||||||||||||||||| ||||| ||| ||||||||| ||||||| |||   ||| |     
T  18729106 gagccacaacgtctctctgcacgtttccgcaataaactctatggcggttacacttcccacgattttgtacccgccagagccaggtgttccattacaatgt 18729007  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactct 282  Q
    |||||||||||||||||||||||||||||||||||| | |||| | |||||||||||||||||||||||| || ||||||||||    
T  18729006 ctctgcagccctccacctctataaataggggactcataacagtcctcaaggtagaatctatctcttcctctaatccctcactct 18728923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 86 - 284
Target Start/End: Original strand, 19860052 - 19860251
Alignment:
Q  86 agactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtg 185  Q
    |||||||||||||||||||  |||||||||   || ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  19860052 agactggttcaaacgaaccgcaacgtctctcaacatgttcccacaataatctctctggtggttacacttcccacgatttcgtaaccgccagagccaggtg 19860151  T
Q  186 tgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    | |||   ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||| |||||| ||||| |||||||||    
T  19860152 tcccattacaacggctccgcagccctccacctctataaataggggactcacagcagtccccaaggtagaatttatctattcctctaaaccgtcactctct 19860251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 15349543 - 15349800
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacaca-agggggtgcacagagcgaaagagactggttcaaa- 98  Q
    ||||||||||||| |||||||||| |||||||||  |||||||| |||||| |||| |  | |  ||||||||||||||||     |||| ||||||||     
T  15349543 atacaatccaaagatcaaacaccatgtttggcaatattacttgcaacacac-ccttccatcgcggagggggtgcacagagcatgcaagaccggttcaaaa 15349641  T
Q  99 cgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacg 198  Q
    ||||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||  ||||||||| | | |||||    
T  15349642 cgaaccacaacatctctttgcacgttcccacaataatctctctcgcggttacacttcccacgatttcgtaaccgccagacccaggtgtgctatcacaacg 15349741  T
Q  199 gctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatc 257  Q
    |||||||||||||||||||||||| |||||||||||  |||||| ||||| ||||||||    
T  15349742 gctctgcagccctccacctctatatataggggactcttagcagtccccaacgtagaatc 15349800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 18258510 - 18258794
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt-tccacacaagggggtgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||||| ||||||||| |||| ||||| ||||||||  || || | || |||||| ||||||||||||  |||||  ||||| ||||||||     
T  18258510 atacaatccaaagcccaaacaccatgttttgcaaacttacttgcagcataccctttctccaca-aagggggtgcacgaagcgagtgagaccggttcaaag 18258608  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| |||||||||  |||| ||||| ||||||||||| | || |||||||||||||  |||||||||||  ||||| ||||||||||||  ||||||    
T  18258609 gaaccacaacgtctctccgcacattcccgcaataaactctttagcagttacacttcccacaatttcgtaaccatcagagccaggtgtgccactacaacgg 18258708  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||| |||||||| |||||||||||||||||||||| | ||||  |||||||||||||||| | || ||| |||||||||||||||    
T  18258709 ctctacagccctctacctctataaataggggactcacaacagtctccaaggtagaatctatatttttctctaaaccctcactctct 18258794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 17756933 - 17757140
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||||||| ||||| |||||||||||||||||||| ||||| ||||||||| |||| |||| | |||||| ||||| || ||||| ||| ||||||||||    
T  17756933 atacaatcgaaagcccaaacaccacgtttggcaaaattactcgcgacacacccctt-ccacgcgaggggggtgcacggaacgaaaaagattggttcaaac 17757031  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||  ||||||||||| |||||||||||||||||||| | ||||||||||||||||| ||||| ||||||| |||||| ||||||||||   ||||||    
T  17757032 gaaccccaacgtctctttccacgttcccacaataaactcacaggcggttacacttcccacgattttgtaaccgtcagagtaaggtgtgccattacaacgg 17757131  T
Q  200 ctctgcagc 208  Q
    ||| |||||    
T  17757132 ctcggcagc 17757140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 66 - 283
Target Start/End: Original strand, 18014438 - 18014656
Alignment:
Q  66 gggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttc 165  Q
    |||||||||| ||||||   ||||  |||||||||||||| || || |   || |||||||| |||||| |||||||| ||||| |||||||| ||||||    
T  18014438 gggggtgcacggagcgagcaagaccagttcaaacgaaccacaatgtttgactgtacgttcccgcaataatctctctggtggttagacttcccacgatttc 18014537  T
Q  166 gtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctctt 265  Q
    |||||||||||||  ||||||||||   |||||||||||||||||||||||||||||  ||||||||||| |||||| |||||||||||||| |||||||    
T  18014538 gtaaccgccagagctaggtgtgccattacaacggctctgcagccctccacctctatatgtaggggactcatagcagtccccaaggtagaatcaatctctt 18014637  T
Q  266 cctc-aaaccctcactctc 283  Q
    ||||  |||||||||||||    
T  18014638 cctcttaaccctcactctc 18014656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21508554 - 21508716
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| |||  |||||||| ||||| ||||||||||||||||||||| |    
T  21508554 atacaatccaaagctcaaacaccacgtttgacaaagttacttgcaacacacccctt-ccatgcaaggggggtgcacggagcgaaagagactggttcaatc 21508652  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatt 163  Q
    |||||| | ||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||    
T  21508653 gaaccacagcgtctctctgcacgttcctgcaataaactctatggcggttacacttcccacgatt 21508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 282
Target Start/End: Original strand, 15318989 - 15319175
Alignment:
Q  96 aaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgca 195  Q
    |||||||||| ||| ||||||||||||||||  |||||| |||||| |||||||||||||||| ||||||||||||||||||   |||||| ||| | ||    
T  15318989 aaacgaaccacaacttctctttgcacgttcctgcaataatctctctagcggttacacttcccacgatttcgtaaccgccagacctaggtgtaccatcaca 15319088  T
Q  196 acggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactct 282  Q
    ||| ||||||||||||||||||||||| |||||| ||||  |||||| |||||||||||||| | ||||| ||| |||||||||||||    
T  15319089 acgactctgcagccctccacctctatatatagggaactcttagcagtccccaaggtagaatcga-ctctttctctaaaccctcactct 15319175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 153 - 287
Target Start/End: Complemental strand, 18043472 - 18043337
Alignment:
Q  153 ttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggta 252  Q
    |||||||||||||||| |||||||||||| | ||| ||   |||||||| ||||||||||||||||||||||||||||||| || ||||| |||||||||    
T  18043472 ttcccatgatttcgtacccgccagagtcatgcgtgtcattacaacggctttgcagccctccacctctataaataggggactaaatgcagtccccaaggta 18043373  T
Q  253 gaatctatctcttcctc-aaaccctcactctctctg 287  Q
    |||| |||||||||||| ||||||||||||||||||    
T  18043372 gaatttatctcttcctctaaaccctcactctctctg 18043337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 256
Target Start/End: Original strand, 15369543 - 15369795
Alignment:
Q  5 aatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacac-aagggggtgcacagagcgaaagagactggttcaaa-cgaa 102  Q
    ||||||||||||||||||||||||||||||  || ||||| |||||| |||| |  | | |||| ||||||  ||||  |  |||| |||||||| ||||    
T  15369543 aatccaaagctcaaacaccacgtttggcaatattccttgcaacacac-ccttccttcgcgaaggcggtgcaaggagcatacaagaccggttcaaaacgaa 15369641  T
Q  103 ccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctc 202  Q
    ||| ||| ||||||||||||||||| |||||| || |||||||||||||||||| |  |||||||||||||||||   |||||| ||| |  |||| |||    
T  15369642 ccacaacttctctttgcacgttcccgcaataatctgtctggcggttacacttcctacaatttcgtaaccgccagacctaggtgtaccatcataacgactc 15369741  T
Q  203 tgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaat 256  Q
    | |||||||||||||||||| |||| ||||||  |||||| |||||||||||||    
T  15369742 tacagccctccacctctatatatagaggactcttagcagtccccaaggtagaat 15369795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 229
Target Start/End: Complemental strand, 3876580 - 3876374
Alignment:
Q  23 cacgtttggcaaagttacttgcgacacactcctt-tccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcac 121  Q
    ||||||||||||| ||||||| |||| || |||| ||| |  |||||||||||| |||| |   |||  |||||||| || | | ||||||||||||||     
T  3876580 cacgtttggcaaacttacttgtgacataccccttctccgcg-aagggggtgcacggagcaagcaagatcggttcaaatgagctacaacgtctctttgcat 3876482  T
Q  122 gttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctat 221  Q
     ||||| |||||| ||||||| || |||||||||| | |||||||||||||||||| | ||||||| |  | ||||||||||||||||||||||||||||    
T  3876481 attcccgcaataatctctctgacgattacacttcctacgatttcgtaaccgccagacttaggtgtgtcttcacaacggctctgcagccctccacctctat 3876382  T
Q  222 aaataggg 229  Q
    | ||||||    
T  3876381 atataggg 3876374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 221
Target Start/End: Complemental strand, 23524238 - 23524128
Alignment:
Q  111 tctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccc 210  Q
    ||||| ||||||||||| ||||||||||| ||  |||||||||| ||| |||||| |||||||||||| |||||||||||   ||| |||||||||||||    
T  23524238 tctctctgcacgttcccgcaataaactctttgatggttacactttccacgatttcttaaccgccagagccaggtgtgccattacaatggctctgcagccc 23524139  T
Q  211 tccacctctat 221  Q
    ||||| |||||    
T  23524138 tccacgtctat 23524128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19857750 - 19857797
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgaca 48  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19857750 atacaatccaaagctcaaacaccacgtttggcaaagttagttgcgaca 19857797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23524304 - 23524248
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactccttt 57  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  23524304 atacaacccaaagcccaaacaccacgttttgcaaagttacttgcgacacaccccttt 23524248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 18043554 - 18043505
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttc 58  Q
    |||||| |||||| |||||||||||||||||||||||| |||| ||||||    
T  18043554 caaagcccaaacatcacgtttggcaaagttacttgcgatacacccctttc 18043505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 14480135 - 14480017
Alignment:
Q  144 cggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagtt 243  Q
    |||||||| || ||| ||||||||||| ||| ||  || ||||||||   ||| ||||||||||||  |||||  |||| |||||||||||  | ||||     
T  14480135 cggttacattttccacgatttcgtaactgccggacacacgtgtgccattacaatggctctgcagccacccaccggtatatataggggactcttaacagtc 14480036  T
Q  244 cccaaggtagaatctatct 262  Q
    ||| |||||||||||||||    
T  14480035 ccctaggtagaatctatct 14480017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15318894 - 15318943
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacac 51  Q
    |||||||||||| |||||||||||||||| ||||  |||||||||||||||    
T  15318894 atacaatccaaa-ctcaaacaccacgttttgcaatattacttgcgacacac 15318943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 14467236 - 14467175
Alignment:
Q  66 gggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttccc 127  Q
    ||||||||||| ||| ||||||||  |||||||||||| | ||||||||||  |||||||||    
T  14467236 gggggtgcacaaagcaaaagagaccagttcaaacgaactacaacgtctcttcccacgttccc 14467175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 6 - 287
Target Start/End: Original strand, 1444 - 1724
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaacca 105  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||    
T  1444 atccaaagcccaaacaccacgtttggcgaagttacttgcgacaca-tcccttccccacaagggg-tgcacggagcgaaagagactggttcaaacgaacca 1541  T
Q  106 taacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgc 205  Q
     ||| ||||| | ||||||||| ||||||||||||||||||||||||||| || |||||  |||| || |||| |||||||||||   |||| ||||| |    
T  1542 caacatctctctacacgttcccgcaataaactctctggcggttacacttctcacgattttataactgctagagccaggtgtgccattacaacagctctac 1641  T
Q  206 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  1642 agccgtccacctctataaatagggcactcaaagcagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 16232 - 16516
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||| ||||||| ||||||| | |||||| |||||||| |||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  16232 atacaacccaaagcccaaacactatgtttggaaaagttacatgcgacacacccctttcc-cacaagggggtgcacggagcgaatgagactggttcaaacg 16330  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||||| |||   ||| |||    
T  16331 aaccacaacatctctctgcacgttcccgcaataaactctctggtggttacacttcccacgattttgtaaccgccagagccaggtgtaccattacaatggc 16430  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagt-tcccaaggtagaatctatctcttcc-tcaaaccctcactctct 284  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| | |||| ||||||||||    
T  16431 tctgcagccctccacctctataaataggggactcaaagcagtcccccaaggtagaatttatctcttcctttaaactctcactctct 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 28067940 - 28068223
Alignment:
Q  1 atacaatccaaa-gctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||| || ||| |||||||||||||||| |||||||| |||| ||||||| | | ||||||||||||| ||||||  |||||||||||||||    
T  28067940 atacaatccaaaagcacaagcaccacgtttggcaaacttacttgcaacac-ctccttttc-cgcaagggggtgcacggagcgagcgagactggttcaaac 28068037  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    || ||  ||||||||| ||||||||||  |||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||   ||||||    
T  28068038 gagcctcaacgtctctctgcacgttcctgcaataaactctccggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacgg 28068137  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||||||||||||||||||||||||||||||||||| |||||| || |||||||||||| |||||||||| |||||||||||||||    
T  28068138 ctctgcagccctccacctctataaataggggactcatagcagtccctaaggtagaatctctctcttcctctaaaccctcactctct 28068223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 6 - 284
Target Start/End: Complemental strand, 23495626 - 23495349
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaacca 105  Q
    ||||||||| |||||||||||||| ||||| ||||| ||||||||| |||| |||| ||||||||||||| || |||||||||| ||||||||||||||     
T  23495626 atccaaagcccaaacaccacgttttgcaaaattactcgcgacacacccctt-ccacgcaagggggtgcacggaacgaaagagaccggttcaaacgaaccc 23495528  T
Q  106 taacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgc 205  Q
     ||||||||||| ||||||||| |||||||||| | | ||||||||||||||| ||||||||||||| |||||| ||||||||||   ||||||||||||    
T  23495527 caacgtctctttccacgttcccgcaataaactcacagacggttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgc 23495428  T
Q  206 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc--aaaccctcactctct 284  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||  ||||| |||||||||    
T  23495427 agccctccacctctataaataggggactcaatgcagtccccaatgtagaatc--tctcttcctctaaaaccttcactctct 23495349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 5931474 - 5931187
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||| | | |||||| | ||||||||||| ||||||| ||||||| |||| ||||||||||||| ||||| |||||| ||||||||||||||||    
T  5931474 atacaatccacaacccaaacatcgcgtttggcaaaattacttgtgacacacccctt-ccacacaaggggggtgcacggagcgatagagactggttcaaac 5931376  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| | ||| ||||| |||||||||||||||||||| ||||||||| |||||| |||||||||||  |||||||| ||   ||||||    
T  5931375 gaaccacaacgtctctctacacattcccgcaataaactctctggcggttgcacttcccacgatttcataaccgccagaaccaggtgtgtcattacaacgg 5931276  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||||||||||||||||||||||||||||||||||   |||| |||||| |||||||||||||| |||| ||||||||||||||||||    
T  5931275 ctctgcagccctccacctctataaataggggactcacgacagtccccaagatagaatctatctctccctctaaaccctcactctctctg 5931187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 8244799 - 8244508
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||||   ||||||| | ||||||  |||||||||| |||||| |||| |||| ||||||||||||| ||||||||||||||||||||||||    
T  8244799 atacaatccaaagtctaaacaccgcatttggctgagttacttgcaacacacccctt-ccacgcaagggggtgcacggagcgaaagagactggttcaaacg 8244701  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtca------ggtgtgccaccgc 194  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||| ||| ||||||||||||||||||| ||      | ||||||| | |    
T  8244700 aaccacaacgtctctttgcacgttcccccaataaactctctagcgattacactttccacgatttcgtaaccgccagagccatgtaatgatgtgccatcac 8244601  T
Q  195 aacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
     ||| ||||||||||||||||||||||||||| |||||||| | |||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  8244600 -acgactctgcagccctccacctctataaataagggactcacatcagtcctcaaggtagaatctatctcttcctcaaaaccctcactctctctg 8244508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 5590613 - 5590896
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagg-gggtgcacagagcgaaagagactggttcaaac 99  Q
    ||||| |||||||| |||||||||||||||||||| ||||| |||||| || |||||| || | ||| ||||||||||| ||||||||||||||||||||    
T  5590613 atacactccaaagcccaaacaccacgtttggcaaaattactcgcgacagacccctttc-acgcgaggagggtgcacagaacgaaagagactggttcaaac 5590711  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||  ||||||||||| ||| ||||| |||||||||| | |||||||||||||||||  |||||||||||| |||||| ||||||||||   ||||||    
T  5590712 gaaccccaacgtctctttccacattcccgcaataaactcgcaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacgg 5590811  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    |||||| ||||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||    |||||||||| |||||||    
T  5590812 ctctgctgccctccacctctataaataggggattcaatgcagtccccaaggtagaatctttcttcctctcaaacccttactctct 5590896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 36712566 - 36712848
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||| ||||||||  ||||||||||||||||||| ||||  ||||||||| |||| |||| | ||||||||||| || ||||||||||| |||||||||    
T  36712566 atacactccaaagcctaaacaccacgtttggcaaaattacccgcgacacacccctt-ccacgctagggggtgcacggaacgaaagagactagttcaaacg 36712664  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||  ||||||||||| ||||||| | ||||||| || | || |||||||||| ||| ||||||||||||| |||||| ||||||||||   |||||||    
T  36712665 aaccccaacgtctctttccacgttctcgcaataaaatcgcaggtggttacactttccacgatttcgtaaccgtcagagttaggtgtgccattacaacggc 36712764  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||    ||||||||||||||||||    
T  36712765 tctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctttcttcctctcaaaccctcactctct 36712848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 15620108 - 15620374
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||||  ||||| ||||||||| |||| |||||||| || ||| |||| ||   |||||||||| || ||||||  ||||| ||||||||||    
T  15620108 atacaatccaaagtccaaacgccacgtttgacaaacttacttgcaacgcacccctt-ccttgcaagggggtgtacggagcgagcgagacgggttcaaacg 15620206  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    | ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| || ||||||||   |||| ||    
T  15620207 agccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacaatttcgtaaccgtcagagccaagtgtgccattacaacagc 15620306  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcct 268  Q
    ||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  15620307 tctacagcccttcacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcct 15620374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 6 - 284
Target Start/End: Original strand, 20899517 - 20899795
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacgaacc 104  Q
    ||||||||| |||||||||||||||| ||| ||||| ||||||||| |||| |||| | |||||| ||||| || |||||||||||||||||||||||||    
T  20899517 atccaaagcccaaacaccacgtttggaaaaattactcgcgacacacccctt-ccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaacc 20899615  T
Q  105 ataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctg 204  Q
      ||||||||||| ||||||||| |||||||||| | ||||||||||||||||| ||||||||||||| |||||| ||||||||||   |||||  ||||    
T  20899616 ccaacgtctctttccacgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacgaatctg 20899715  T
Q  205 cagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    ||||||||||||| |||||||||||||||||| ||||| |||||||| |||||| |||    || |||||||||||||||    
T  20899716 cagccctccacctttataaataggggactcaatgcagtccccaaggttgaatctttcttcctctaaaaccctcactctct 20899795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 41037561 - 41037854
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||||| ||||||| ||| |||||||| |||||||| ||||||  ||||||    | ||||||||||  ||| |  |||||||||||||| |    
T  41037561 atacaatccaaagcccaaacactacggttggcaaacttacttgcaacacaccactttccggcaaggggggtgcacgaagcaagcgagactggttcaaatg 41037660  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||| ||||| ||| | ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||   |||||||    
T  41037661 aacgataacatctgtctgcacgttcacgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacggc 41037760  T
Q  201 tctgcagccctccacc---------tctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    || |||||||||||||         ||||||||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  41037761 tccgcagccctccacctctataaattctataaataggggactcatagcagtccccaaggtagaatatatctcttcctctaaaccctcactctct 41037854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 66 - 263
Target Start/End: Complemental strand, 42792700 - 42792503
Alignment:
Q  66 gggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttc 165  Q
    ||||||||||||||| |  ||||| |||||||||||  || ||||| ||| ||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  42792700 gggggtgcacagagcaagcgagaccggttcaaacgagtcacaacgtatctctgcacgttcccgcaataaactctctagcggttacacttcccacgatttc 42792601  T
Q  166 gtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctc 263  Q
    ||||||||||||| ||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||| | || | ||||||||||||||||||||    
T  42792600 gtaaccgccagagccaggtgtgccactacaactgctctgcagccctccacctctataactaggggactcataacaatccccaaggtagaatctatctc 42792503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 33622407 - 33622664
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||||| |||||| || |||||||||| ||||| ||||||||| |||| ||||   |||||||||||||| ||||||||||||||| |||||    
T  33622407 atacaatccaaagcccaaacatcatgtttggcaaaattactcgcgacacacccctt-ccacgtgagggggtgcacagaacgaaagagactggtttaaacg 33622505  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgcc---agagtcaggtgtgccaccgcaac 197  Q
    ||||  |||||||||||  |||||||  |||||||||| | ||||||||||||||||| |||||||||||| ||   ||||| |||||||  |   ||||    
T  33622506 aaccccaacgtctctttctacgttccagcaataaactcacaggcggttacacttcccaggatttcgtaaccaccgtcagagtaaggtgtgtaattacaac 33622605  T
Q  198 ggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaat 256  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||||    
T  33622606 ggctctgcagccctccacctctataaataggggactcaatgcagtccctaagatagaat 33622664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 94 - 284
Target Start/End: Original strand, 22922050 - 22922241
Alignment:
Q  94 tcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccg 193  Q
    |||||||||||| ||||||||| || ||||| |   |||||||| |||||||||||||||||||| ||||| |||||| |||||| |||||||| |||      
T  22922050 tcaaacgaaccacaacgtctctctgtacgtttcaggaataaactttctggcggttacacttcccacgattttgtaaccaccagagccaggtgtgtcacta 22922149  T
Q  194 caacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  22922150 caacggctctgtagccctccacctctataaataggggactcataacagttcccaaggtagaatctatctcttcctctaaaccctcactctct 22922241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 92 - 284
Target Start/End: Original strand, 22922645 - 22922838
Alignment:
Q  92 gttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccac 191  Q
    |||||||||||||| ||| ||||| || | ||| |  |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| |||    
T  22922645 gttcaaacgaaccacaacctctctctgtatgtttcagcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggtgtgtcac 22922744  T
Q  192 cgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
      ||||||||||| |||||||||||||||||||||||||||||| | || | |||||||||||||||||||||||||| |||||||||||||||    
T  22922745 tacaacggctctgtagccctccacctctataaataggggactcataacaatccccaaggtagaatctatctcttcctctaaaccctcactctct 22922838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 117 - 284
Target Start/End: Complemental strand, 38608435 - 38608267
Alignment:
Q  117 tgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacc 216  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||||||| || ||||||||    
T  38608435 tgcacgttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcctccacaacggctctgtagacctccacc 38608336  T
Q  217 tctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc--aaaccctcactctct 284  Q
    |||||||||||||||||||| ||||| || |||||||||||| | ||| ||||  |||||||||||||||    
T  38608335 tctataaataggggactcaatgcagtccctaaggtagaatct-tttctccctctaaaaccctcactctct 38608267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13538013 - 13537860
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||| ||||||||| |||||| ||||||||||||| ||||| ||||||||| |||| |||| | |||||| || || || |||||||||||||||||||     
T  13538013 ataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacacccctt-ccacgcgaggggggtgtacggaacgaaagagactggttcaaat 13537915  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacactt 154  Q
    |||||  ||||||||||| ||||||||| |||||||||| | | |||||||||||    
T  13537914 gaaccccaacgtctctttccacgttcccgcaataaactcacagccggttacactt 13537860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 19329840 - 19330052
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||||| |||||| |||| ||||||||||||||  |||||||||| |||  |||| ||    | |||||||||| |||  |   |||| ||||||||||    
T  19329840 atacaattcaaagcccaaataccacgtttggcaacattacttgcgagacatcccttccctgcgaggggggtgcacggagaaagcaagaccggttcaaacg 19329939  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    | ||| |||||  || |||| |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||   |||||||||   ||| |||    
T  19329940 agccacaacgttactctgcatgttcccgcaataatctctctggcggttacacttcccacgatttcgtaaccgccagagcttggtgtgccattacaatggc 19330039  T
Q  201 tctgcagccctcc 213  Q
    |||| ||||||||    
T  19330040 tctgtagccctcc 19330052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 22510256 - 22510097
Alignment:
Q  10 aaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagg-gggtgcacagagcgaaagagactggttcaaacgaaccataa 108  Q
    |||| ||||||||||||||||  ||| ||||  ||||||||| |||| |||| | ||| |||||||| || ||||||||||||||| ||||||||   ||    
T  22510256 aaagttcaaacaccacgtttgataaaattacccgcgacacacccctt-ccacgcgaggtgggtgcacggaacgaaagagactggttaaaacgaactccaa 22510158  T
Q  109 cgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaa 169  Q
    ||||||||| || |||||| |||||||||| | ||||||||||||||||| ||||||||||    
T  22510157 cgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaa 22510097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24095476 - 24095343
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||||| |||| |||||||||||||| |||||||||| ||||| ||  ||| | | |||||| ||||| |||| |  ||||| |||||||||    
T  24095476 atacaatccaaagcccaaataccacgtttggcaacgttacttgcggcacac-cccgtccgcgcgagggggatgcacggagcaagcgagaccggttcaaac 24095378  T
Q  100 gaaccataacgtctctttgcacgttcccacaataa 134  Q
     ||||  ||||||||||||||||||||| ||||||    
T  24095377 aaaccccaacgtctctttgcacgttcccgcaataa 24095343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 19330050 - 19330092
Alignment:
Q  243 tcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  19330050 tcccaaggtagaatctatctcttcctctaaaccctcactctct 19330092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 173
Target Start/End: Complemental strand, 31393196 - 31393167
Alignment:
Q  144 cggttacacttcccatgatttcgtaaccgc 173  Q
    ||||||||||||||||||||||||||||||    
T  31393196 cggttacacttcccatgatttcgtaaccgc 31393167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 146; Significance: 6e-77; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 32 - 283
Target Start/End: Complemental strand, 1861 - 1609
Alignment:
Q  32 caaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaa 131  Q
    ||||||||||||| ||| || |||| |||||||||||||||| | |||||||||||| |||||||||||||||| ||||||||| ||||||||||| |||    
T  1861 caaagttacttgcaacatacccctt-ccacacaagggggtgcccggagcgaaagagattggttcaaacgaaccacaacgtctctctgcacgttcccgcaa 1763  T
Q  132 taaa-ctctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaatagggg 230  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||| || || |||||   |||||||||||||||| ||||||||||||||||||||    
T  1762 taaaactctctggcggttacacttcccacgatttcgtaaccgccagagccaagtatgccattacaacggctctgcagccatccacctctataaatagggg 1663  T
Q  231 actcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctc 283  Q
    ||||| | |||| ||||| |||||||||||||||||||| ||||||||||||||    
T  1662 actcacaacagtccccaatgtagaatctatctcttcctctaaaccctcactctc 1609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 133 - 284
Target Start/End: Complemental strand, 15517 - 15365
Alignment:
Q  133 aaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggac 232  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||    
T  15517 aaactctctggcggttacacttcccacgatttagtaaccgccagagtcaggcatgccattgcaacggctctgcagccctccacctctataaataggggac 15418  T
Q  233 tcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||| | |||| |||  ||||||||||||||||||||| |||||||||||||||    
T  15417 tcataacagtccccgcggtagaatctatctcttcctctaaaccctcactctct 15365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15583 - 15520
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaa 65  Q
    ||||||| | ||||||||||| | |||||||||||||||||||| ||| || || ||||||||||    
T  15583 atacaataccaagctcaaacaacgcgtttggcaaagttacttgcaacatac-cccttccacacaa 15520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 3 - 283
Target Start/End: Original strand, 29975 - 30256
Alignment:
Q  3 acaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggg-ggtgcacagagcgaaagagactggttcaaacga 101  Q
    |||||||||||| |||||| |||||||||||||||||| ||| |||||| |||| |||  |||||| ||||||| |||||||||||||||||||||||||    
T  29975 acaatccaaagcccaaacagcacgtttggcaaagttacatgcaacacacccctt-ccatgcaagggaggtgcacggagcgaaagagactggttcaaacga 30073  T
Q  102 accataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggct 201  Q
    |||| ||||||||| | ||||||||| ||||||| ||||||| ||||||||||||||  ||||||||||| |||||| ||||||| ||    ||| ||||    
T  30074 accacaacgtctctctacacgttcccgcaataaaatctctggaggttacacttcccacaatttcgtaaccaccagagccaggtgttccgttacaatggct 30173  T
Q  202 ctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctc 283  Q
    ||||||||||||||||||||||||| |||||||| |||||| || ||||||||||||||||||||||| ||| ||||||||||    
T  30174 ctgcagccctccacctctataaatacgggactcacagcagtccctaaggtagaatctatctcttcctctaaatcctcactctc 30256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 4112 - 4396
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt-tccacacaagggggtgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||||  |||||||||||||||||||| ||||||||  || || |||| |||||  |||||||| ||| ||||||  | ||| |||||||||    
T  4112 atacaatccaaagtccaaacaccacgtttggcaaacttacttgcagcataccccttctccacg-aagggggttcacggagcgagcgggaccggttcaaac 4210  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||| | ||||||||| | ||||||||||||| || ||||||| ||||| |||||||||||| |||||| ||||||||||||  ||||||    
T  4211 gaaccacaacgtctatctgcacgttctcgcaataaactctctcgcagttacacatcccacgatttcgtaaccaccagagccaggtgtgccactacaacgg 4310  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||||||||||||||||||||||||||||||||||| | |||| ||||||  |||||||||||||||||| |||||||||||||||    
T  4311 ctctgcagccctccacctctataaataggggactcacatcagtccccaagagagaatctatctcttcctctaaaccctcactctct 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 956 - 1237
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt-tccacacaagggggtgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||  || || |||| |||||  |||||||||||| ||||||  |||||||||||||||    
T  956 atacaatccaaagcccaaacaccacgtttagcaaacttacttgcagcataccccttctccacg-aagggggtgcacggagcgagcgagactggttcaaac 1054  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||| ||| |||| |||||  ||||||||||| |||||||||||||||||| |||||||||| ||| |||| ||||||| |||   ||||||    
T  1055 gaaccacaacgtttctctgcatgttcctgcaataaactctatggcggttacacttcccacgatttcgtaatcgctagagccaggtgttccattacaacgg 1154  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactc 281  Q
    || || |||||||||||||||||||||||||||||| ||||||  |||| |||||||||||||||||||| ||||||||||||    
T  1155 ctatgtagccctccacctctataaataggggactcacagcagtctccaacgtagaatctatctcttcctctaaaccctcactc 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 5e-68; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 19790559 - 19790346
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaac 99  Q
    |||| ||||||| | ||||||||  |||||| ||||||||||||||||| | |||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  19790559 ataccatccaaaacccaaacaccgtgtttggtaaagttacttgcgacacgcccctt-ccagacaaggggggtgcacagagcgaaagagactggttcaaac 19790461  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||   ||||||    
T  19790460 gaaccacaacgtctctctgcacgttcccacaataaactctctgacggttacacttcccacgatttcgtaaccgtcagagtcaggtgtgccattacaacgg 19790361  T
Q  200 ctctgcagccctcca 214  Q
    |||||||||||||||    
T  19790360 ctctgcagccctcca 19790346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 22915334 - 22915052
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||||||  |||| ||||||||||||||| |||  |||||||| |||||| || |||| | ||||||| ||||| ||||||  |||||| |||||||||    
T  22915334 atacaatctgaagcgcaaacaccacgtttgacaagtttacttgcaacacacccccttcc-cgcaagggg-tgcacggagcgagcgagactagttcaaacg 22915237  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    || || ||||||||| | ||||||||| ||||||||||||| || ||||||||||||| |||||| |||||||| ||| || |||| |||   |||||||    
T  22915236 aatcacaacgtctctcttcacgttcccgcaataaactctctagctgttacacttcccacgatttcataaccgccggagccaagtgtaccattacaacggc 22915137  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  22915136 tctgcagctctccacctttataaataggggactcatagcagtccccaaggtagaatctatctcttcctctaaaccctcactctct 22915052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 91 - 258
Target Start/End: Original strand, 16853014 - 16853181
Alignment:
Q  91 ggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgcca 190  Q
    ||||||||| | ||| ||||||||| |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  16853014 ggttcaaacaagccacaacgtctctctgcacgttaccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcca 16853113  T
Q  191 ccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatct 258  Q
       ||||   | |||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  16853114 ttacaacatatttgcagccctccacctctataaataggggactcaatgcagtccccaagggagaatct 16853181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 91 - 284
Target Start/End: Complemental strand, 16914900 - 16914706
Alignment:
Q  91 ggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgcca 190  Q
    ||||||||||| ||  ||||||||||||||||||||| |||| |  |||||   |||||||| ||||| ||||||||||||||||||   |  |||||||    
T  16914900 ggttcaaacgagccgcaacgtctctttgcacgttcccgcaattatttctctactggttacacctcccacgatttcgtaaccgccagaccgatctgtgcca 16914801  T
Q  191 ccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
       ||| ||||||||||||||||||||||||| |||| || |||  | |||| ||||| | |||||||||||||||||| |||||||||||||||    
T  16914800 ttacaatggctctgcagccctccacctctatatatagagggctcttaacagtccccaaagcagaatctatctcttcctcaaaaccctcactctct 16914706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 287
Target Start/End: Complemental strand, 1998087 - 1998003
Alignment:
Q  204 gcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||| |||||  ||| ||||||||||||||||||    
T  1998087 gcagctctccacctctataaatagggtactcaaagcagtccccaaggtagaatctgtctctgtctctaaaccctcactctctctg 1998003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 44635947 - 44635823
Alignment:
Q  85 gagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggt 184  Q
    |||||| |||||||||||| | |||||||||| |||||||||| | |    ||||||||||||||||||||||| ||||||||||||| | || ||| ||    
T  44635947 gagactagttcaaacgaactacaacgtctcttcgcacgttcccgcgaatctctctctggcggttacacttcccacgatttcgtaaccgacggactcacgt 44635848  T
Q  185 gtgccaccgcaacggctctgcagcc 209  Q
    ||||||   ||||||||||||||||    
T  44635847 gtgccattacaacggctctgcagcc 44635823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 284
Target Start/End: Complemental strand, 19773462 - 19773386
Alignment:
Q  210 ctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcct--caaaccctcactctct 284  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||   |||||||||||||||    
T  19773462 ctccacctctataaataggagactcacagcagtccccaaggtagaatctatctcttccttctaaaccctcactctct 19773386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 284
Target Start/End: Original strand, 3559099 - 3559317
Alignment:
Q  65 agggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgattt 164  Q
    |||||||||||||||| || ||||| |||||||||||||   ||| |||||| ||| |||||| |||    |||| ||| |||||||||| ||| |||||    
T  3559099 agggggtgcacagagcaaacgagaccggttcaaacgaactgcaacatctcttcgcatgttcccgcaaatctctctttggaggttacactttccacgattt 3559198  T
Q  165 cgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctct 264  Q
    |||||| ||  ||  ||  ||  |||   ||||||||||||||||  ||| ||||||| |||||||||||  | ||||||||||||||||||||| ||||    
T  3559199 cgtaactgcaggaa-cacatgaaccattacaacggctctgcagccacccatctctatatataggggactcttaacagttcccaaggtagaatcta-ctct 3559296  T
Q  265 tcctc-aaaccctcactctct 284  Q
     |||| ||||||||| |||||    
T  3559297 ccctctaaaccctcattctct 3559317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 22006583 - 22006519
Alignment:
Q  194 caacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatct 258  Q
    ||||| ||||||||||||||||||||||| ||| |||||||  |||||| |||||||||||||||    
T  22006583 caacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatct 22006519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 22014100 - 22014036
Alignment:
Q  194 caacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatct 258  Q
    ||||| ||||||||||||||||||||||| ||| |||||||  |||||| |||||||||||||||    
T  22014100 caacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatct 22014036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 151207 - 151490
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt-tccacacaagggggtgcacagagcgaaagagactggttcaaac 99  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||  || || ||||  ||||| |||||||||||| ||||||  ||||| | |||||||    
T  151207 atacaatccaaagcccaaacactacgtttggcaaacttacttgcagcataccccttccccaca-aagggggtgcacggagcgagcgagaccgattcaaac 151305  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    |||||| ||||||||| || |||||||  |||||||||||||||| ||| ||||||||| |||||||||||||| |||| ||||| | ||||  ||||||    
T  151306 gaaccacaacgtctctctgtacgttcctgcaataaactctctggc-gtttcacttcccacgatttcgtaaccgctagagccaggtcttccactacaacgg 151404  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcc-tcaaaccctcactctct 284  Q
    |||||||||||||||||||||||||||||||||||| |||| | || ||||||||||||||||||||| | |||||||||||||||    
T  151405 ctctgcagccctccacctctataaataggggactcacagcattccctaaggtagaatctatctcttcctttaaaccctcactctct 151490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 284
Target Start/End: Original strand, 7270 - 7548
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg--tgcacagagcgaaagagactggttcaaacgaac 103  Q
    ||||||||| ||||||||| |||||||||| ||||| ||||||||| || | |||||| ||||||  ||||| || ||||||||||||||||||||||||    
T  7270 atccaaagcccaaacaccaagtttggcaaaattactcgcgacacaccccct-ccacacgagggggggtgcacggaacgaaagagactggttcaaacgaac 7368  T
Q  104 cataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctct 203  Q
    |  ||||||||||| ||||||||| |||||||||| | ||| ||||||||||| | |||||||||| || |||||| ||||||||||   |||||||| |    
T  7369 cccaacgtctctttccacgttcccgcaataaactcacaggcagttacacttccaacgatttcgtaa-cgtcagagtaaggtgtgccattacaacggcttt 7467  T
Q  204 gcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||    ||||||||||||| ||||    
T  7468 gcagccctccacctctataaataggggactcaatgcaatccccaaggtagaatctttcttcctctcaaaccctcaccctct 7548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 242957 - 242673
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||| ||  | | | |||||||| ||||||   |||| ||||||||||    
T  242957 atacaatctaaagcccaaacaccaagtttggcaacattacttgcgacacaccccttccccgataggcgggtgcacggagcgagcaagaccggttcaaacg 242858  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||||||| |||| |||||||||||   |||||||    
T  242857 aaccacaacgtctctttgcacgttcccgcaataaactctttggcagttacacttcccacgattacgtaaccgcaagagccaggtgtgccattacaacggc 242758  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||| |||||||||||||||| |||| | |||||   |||| |||| | ||||||||| ||||||||| ||| |||||||||||    
T  242757 tctgccgccctccacctctatatatagagtactcacttcagtccccaggatagaatctaactcttcctctaaatcctcactctct 242673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 253597 - 253313
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    |||||||||||| | |||||||||||||||||||  |||| |||||||||| |||| ||  | | ||| |||||| ||| |    |||| |||||||| |    
T  253597 atacaatccaaatcccaaacaccacgtttggcaacattacgtgcgacacaccccttccccgagaggggagtgcacggagagtgcaagaccggttcaaatg 253498  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    ||||| ||| ||||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||   ||||| |    
T  253497 aaccacaacatctctctgcacgttcccgcaataaactctctggcagttacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacgac 253398  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    | ||||||| ||||||| |||| ||||||||||||   |||| |||||||||||||||| ||||||||| ||||| |||||||||    
T  253397 tttgcagccgtccacctttatatataggggactcactacagtccccaaggtagaatctaactcttcctctaaaccgtcactctct 253313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 68957 - 68689
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||||| |||||| || || |||||||| ||||  ||||||||||||||| ||||  |    | |||||||||| |||| |  |||||| |||||||||    
T  68957 atacaattcaaagcccagactccacgttttgcaacattacttgcgacacaccccttctctgcgaggggggtgcacggagcaaccgagactagttcaaacg 68858  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    | ||| ||||||||||  ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||  ||||||| ||   |||||||    
T  68857 agccacaacgtctcttcccacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccgccaaagcaaggtgtgtcattacaacggc 68758  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc 269  Q
    | |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||    
T  68757 tttgcagccctccacctctataaataggggactcaccgcagtgcccaaggtagaatctatatcttcctc 68689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 85 - 269
Target Start/End: Complemental strand, 75045 - 74861
Alignment:
Q  85 gagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggt 184  Q
    ||||||||||||||||| ||| ||||| |||  |||||||||| |||||||||||||||||||||||||||| | |||||| |||| ||||||| |||||    
T  75045 gagactggttcaaacgagccacaacgtgtctccgcacgttcccgcaataaactctctggcggttacacttccgacgatttcataactgccagagccaggt 74946  T
Q  185 gtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc 269  Q
    ||||||   |||||||||| |||||||||||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||    
T  74945 gtgccattacaacggctctacagccctccacctctataaataggggactcaccgcattccccaaggtagaatctatctcttcctc 74861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 10788 - 11045
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggg-gtgcacagagcgaaagagactggttcaaac 99  Q
    |||| ||||||||| |||||||||||||||||||| ||||| ||||||||| |||| |||  | ||||| |||||  || |||||||||| ||||||||     
T  10788 ataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacacccctt-ccatgcgaggggagtgcaaggaacgaaagagaccggttcaaaa 10886  T
Q  100 gaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacgg 199  Q
    ||| |  ||||||||||| || |||||| |||||||||| | ||||||||||||||||||||||||||||||| |||||| ||||||||||   ||||||    
T  10887 gaaacccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccatgatttcgtaaccgtcagagttaggtgtgccattacaacgg 10986  T
Q  200 ctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatct 258  Q
    |||| ||||||||||||| ||||||||| |||||||| | ||| ||||||| |||||||    
T  10987 ctctacagccctccacctttataaatagtggactcaatggagtccccaagggagaatct 11045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 108; Significance: 3e-54; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 6 - 284
Target Start/End: Complemental strand, 15156 - 14872
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-------tgcacagagcgaaagagactggttcaaa 98  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||| |||| ||||   ||||||       ||||| || |||||||||  ||||||||    
T  15156 atccaaagcccaaacaccacgtttggcaaaattactcgcgacacacccctt-ccacgtgaggggggggggggtgcacggaacgaaagagatcggttcaaa 15058  T
Q  99 cgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacg 198  Q
    ||||||  | ||||||||| ||||||||| |||||||||| | ||| ||||||||||||| ||||||||||||| |||||| ||||||||||   |||||    
T  15057 cgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacg 14958  T
Q  199 gctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctcaaaccctcactctct 284  Q
    ||||||| ||| ||||||| |||||||||||||||||| ||||| ||||||||||||||| |||    || |||||||||||||||    
T  14957 gctctgcggccatccacctttataaataggggactcaatgcagtccccaaggtagaatctttcttcctctaaaaccctcactctct 14872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 17332 - 17200
Alignment:
Q  6 atccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaaggggg-tgcacagagcgaaagagactggttcaaacgaacc 104  Q
    ||||||| | |||||||||||||||||||| ||||| | ||||||| |||| |||| | |||||| ||||| || |||||||||||||||||||||||||    
T  17332 atccaaatcccaaacaccacgtttggcaaaattactcgtgacacacccctt-ccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaacc 17234  T
Q  105 ataacgtctctttgcacgttcccacaataaactc 138  Q
      ||||||||||| ||||||||| ||||||||||    
T  17233 ccaacgtctctttccacgttcccgcaataaactc 17200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 17190 - 17113
Alignment:
Q  181 aggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatct 258  Q
    ||||||||||   |||| |||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||    
T  17190 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatct 17113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 12604 - 12323
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacg 100  Q
    ||||||| |||||| |||||||||||||| ||||  ||||||||||||||| || |||  | | ||||| |||||||||||||  |||| |||| ||| |    
T  12604 atacaattcaaagcccaaacaccacgttttgcaacattacttgcgacacac-ccattctccgcgaggggatgcacagagcgaacaagaccggtttaaatg 12506  T
Q  101 aaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggc 200  Q
    | ||| ||||||| |  |||||||||| |||||| |||||| |||||||||||||||||||||| ||||||||||||| | |||||||||   |||||||    
T  12505 agccacaacgtctgt--gcacgttcccgcaataatctctctagcggttacacttcccatgattttgtaaccgccagagcctggtgtgccattacaacggc 12408  T
Q  201 tctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||||||||||| |||||||||| |||||||||||| | ||   ||||||||| |||||| || |||||| |||||||||||||||    
T  12407 tctgcagcccttcacctctatatataggggactcataacaaaccccaaggtataatctaactattcctctaaaccctcactctct 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 54528 - 54770
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacac-aagggggtgcacagagcgaaagagactggttcaaacgaaccata 107  Q
    |||||| ||||  |||||||||||||| ||||| | ||||||| ||  ||||| | | ||||| |||| || |||| |||||||||||||||||| |  |    
T  54528 caaagcccaaaatccacgtttggcaaaattactcgagacacacccc--tccacgcgaggggggcgcacggaacgaaggagactggttcaaacgaaaccca 54625  T
Q  108 acgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcag 207  Q
    |||||||| | ||||||||| |||||||||| | || |||||||||||||||||||||||||||| |||||| |||||| |||   |||||||| |||||    
T  54626 acgtctctctccacgttcccgcaataaactcacaggtggttacacttcccatgatttcgtaaccgtcagagtaaggtgtaccattacaacggctatgcag 54725  T
Q  208 ccctccacctctataaataggggactcaaagcagttcccaaggta 252  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||    
T  54726 ccctccacctctataaataggggactcaatgcagtcccaaaggta 54770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 37142 - 37425
Alignment:
Q  1 atacaatccaaagctcaaacaccacgtttggcaaagttacttgcgacacactcctt-tccac-acaagggggtgcacagagcgaaagagactggttcaaa 98  Q
    |||||||||||| || ||| |||||||||||||  |||||||||||||||| |||| ||| | |||  |||||||||||||| |   |||| | ||||||    
T  37142 atacaatccaaatctaaaataccacgtttggcagtgttacttgcgacacaccccttctccgcgaca--ggggtgcacagagcaagcaagaccgattcaaa 37239  T
Q  99 cgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacg 198  Q
    | ||||  ||||||||| |||| |||||  |||||| ||||||| ||||||||||||||| |||||| |||||||||||| | || |||||| | |||||    
T  37240 caaaccgcaacgtctctctgcatgttcctgcaataatctctctg-cggttacacttcccacgatttcataaccgccagagcctggcgtgccatcacaacg 37338  T
Q  199 gctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    |||||||||||||||||||||||| |||||||||||   ||||| | |||| ||||||| |||||| ||||  ||||||||||||||    
T  37339 gctctgcagccctccacctctatatataggggactcgtggcagtccgcaagatagaatcaatctctccctcttaaccctcactctct 37425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 284
Target Start/End: Original strand, 2811 - 3029
Alignment:
Q  66 gggggtgcacagagcgaaagagactggttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttc 165  Q
    |||||||||| |||||||  |||| |||||||||||| || || |||||| ||||||||||   ||||| |||||| |||||||||||||||| ||||||    
T  2811 gggggtgcacggagcgaacaagaccggttcaaacgaaacacaatgtctctctgcacgttccagtaataatctctctagcggttacacttcccacgatttc 2910  T
Q  166 gtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctctt 265  Q
    ||||||||||||| | |||||||||   |||| |||||||||| ||||||||||||| ||| |||||||| | |||| || ||||||||||||| |||||    
T  2911 gtaaccgccagagcctggtgtgccattacaacagctctgcagctctccacctctatatata-gggactcataacagtcccgaaggtagaatctaactctt 3009  T
Q  266 cctc-aaaccctcactctct 284  Q
     ||| || ||||||||||||    
T  3010 tctcgaagccctcactctct 3029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 9406 - 9243
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccataa 108  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||||||| | | ||  ||||||| ||||||    ||||||||||||||||||| ||    
T  9406 caaagcccaaacaccacgtttggcaaaattacttgcgacacacccctttcc-cgcgagcaggtgcacggagcga----gactggttcaaacgaaccacaa 9312  T
Q  109 cgtctctttgcacgttcccacaataaactctctggcgg-ttacacttcccatgatttcgtaaccgccag 176  Q
    ||||||| ||||||||||  ||||||||||||| |||| ||||||||||||  ||||||||||||||||    
T  9311 cgtctctctgcacgttcctgcaataaactctctagcggtttacacttcccacaatttcgtaaccgccag 9243  T

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Target: scaffold0299 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 19237 - 19147
Alignment:
Q  198 ggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctctctg 287  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  19237 ggctctgcagccctccacctctataaataggggactcactgcagtccccaaggtagaatctatctcttcctctaaatcctcactctctctg 19147  T

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Target: scaffold0025 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 284
Target Start/End: Original strand, 86424 - 86562
Alignment:
Q  147 ttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataaataggggactcaaagcagttccc 246  Q
    |||||||| ||| |||||||||| |||||||| |  ||||||||   ||||| || |||| ||||||||||||||| |||||||||||| |||||| ||     
T  86424 ttacactttccacgatttcgtaatcgccagagcctagtgtgccattacaacgactttgcaaccctccacctctatatataggggactcatagcagtcccg 86523  T
Q  247 aaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
    ||| |||||||||| |||||||| |||| ||||||||||    
T  86524 aagatagaatctatttcttcctctaaactctcactctct 86562  T

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Target: scaffold0011 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 20323 - 20455
Alignment:
Q  124 tcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccaccgcaacggctctgcagccctccacctctataa 223  Q
    ||||||||| |  ||||| ||||||||||||||||  |||| ||||||||  ||  || |||| |||   ||||||||||||||||||||||||||| ||    
T  20323 tcccacaattatttctctagcggttacacttcccacaattttgtaaccgcttgacccaagtgtaccattacaacggctctgcagccctccacctctaaaa 20422  T
Q  224 ataggggactcaaagcagttcccaaggtagaat 256  Q
    |||||||||||  | |||| |||||||||||||    
T  20423 ataggggactcttaacagtccccaaggtagaat 20455  T

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Target: scaffold0063 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 284
Target Start/End: Original strand, 36786 - 36978
Alignment:
Q  92 gttcaaacgaaccataacgtctctttgcacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgccagagtcaggtgtgccac 191  Q
    ||||||||||||   |||||||||| ||| |||||| |||    |||| ||| ||||||||||||||  |||||||||||| | ||  || ||||||||     
T  36786 gttcaaacgaactgcaacgtctcttcgcaagttcccgcaaatctctctttggaggttacacttcccacaatttcgtaaccgtcggacacacgtgtgccat 36885  T
Q  192 cgcaacggctctgcagccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctc-aaaccctcactctct 284  Q
      |||||||||| |||||  ||||||||||| |||||||||||  | ||||  | ||||||||||||| |||| |||| ||||||||| |||||    
T  36886 tacaacggctctacagccacccacctctatatataggggactcttaacagtctctaaggtagaatcta-ctctccctctaaaccctcattctct 36978  T

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Target: scaffold1272 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 2019 - 1968
Alignment:
Q  9 caaagctcaaacaccacgtttggcaaagttacttgcgacacactcctttcca 60  Q
    |||||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  2019 caaagcccaaacaccacgtttggcaaaattacttgcgacacacccctttcca 1968  T

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Target: scaffold0233 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 15998 - 16082
Alignment:
Q  92 gttcaaacgaaccataacgtctctttg--cacgttcccacaataaactctctggcggttacacttcccatgatttcgtaaccgcc 174  Q
    ||||||||||||  |||||| |||||   ||||||||||| |  | ||| | ||||||||||||||||| |||||||||||||||    
T  15998 gttcaaacgaactgtaacgtatctttatccacgttcccacgaatatctcaccggcggttacacttcccacgatttcgtaaccgcc 16082  T

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