View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11581_low_36 (Length: 317)
Name: NF11581_low_36
Description: NF11581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11581_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 33711386 - 33711682
Alignment:
| Q |
1 |
ccagttggaaaaatatctcaatttccaagactctcagaagcttcaaatatgtatgattgaataaatgtcacatttcacatcacactttctttgctttaca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711386 |
ccagttggaaaaatatctcaatttccaagactctcagaagcttcaaatatgtatgattgaataaatgtcacatttcacatcacactttctttgctttaca |
33711485 |
T |
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| Q |
101 |
agccattgaccaaaacttcattcttctctcaattcatttttctatcatattctgaaagctatacaatttatatagtattttttactataaaatgaagagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
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| T |
33711486 |
agccattgaccaaaacttcattcttctctcaattcatttttctatcatattctgaaagctatgcaa-ttatatagtattttttactataaaatgaagagt |
33711584 |
T |
|
| Q |
201 |
agaagaggatgtatgtgatgacgtggagtactgatataggtcaagtattattttttacatgcaacatttaatattgtttttatgcaacagttttctat |
298 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711585 |
agaagaggatgtatgtgatgacgtggagtactggtataggtcaaatattattttttacatgcaacatttaatattgtttttatgcaacagttttctat |
33711682 |
T |
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