View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11581_low_5 (Length: 770)

Name: NF11581_low_5
Description: NF11581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11581_low_5
NF11581_low_5
[»] chr2 (26 HSPs)
chr2 (19-762)||(38355451-38356197)
chr2 (439-501)||(44860333-44860395)
chr2 (456-501)||(37411245-37411290)
chr2 (456-501)||(5367205-5367250)
chr2 (432-493)||(28524447-28524508)
chr2 (439-499)||(18889575-18889635)
chr2 (456-496)||(20242728-20242768)
chr2 (423-499)||(35056883-35056959)
chr2 (458-501)||(23718039-23718082)
chr2 (458-501)||(24105711-24105754)
chr2 (455-501)||(18276534-18276580)
chr2 (463-501)||(21616775-21616813)
chr2 (456-501)||(34691806-34691851)
chr2 (456-501)||(34714218-34714263)
chr2 (457-498)||(39279691-39279732)
chr2 (429-501)||(12668397-12668469)
chr2 (456-496)||(34784983-34785023)
chr2 (462-501)||(35449526-35449565)
chr2 (434-500)||(11223842-11223908)
chr2 (439-501)||(17776600-17776662)
chr2 (459-501)||(30527599-30527641)
chr2 (456-501)||(2331807-2331850)
chr2 (456-501)||(28677922-28677966)
chr2 (459-500)||(30471052-30471093)
chr2 (457-494)||(31808097-31808134)
chr2 (456-501)||(42832277-42832322)
[»] scaffold0040 (1 HSPs)
scaffold0040 (19-240)||(56901-57122)
[»] scaffold0123 (1 HSPs)
scaffold0123 (385-501)||(44454-44571)
[»] chr8 (29 HSPs)
chr8 (384-501)||(15816057-15816175)
chr8 (424-501)||(11927055-11927132)
chr8 (432-496)||(26902152-26902216)
chr8 (455-501)||(14134712-14134758)
chr8 (456-501)||(4786339-4786384)
chr8 (385-501)||(11803272-11803389)
chr8 (456-501)||(13844597-13844642)
chr8 (456-501)||(34897098-34897143)
chr8 (458-501)||(31236580-31236623)
chr8 (455-501)||(12606829-12606875)
chr8 (455-501)||(20679395-20679441)
chr8 (456-501)||(3025564-3025609)
chr8 (456-493)||(8847277-8847314)
chr8 (456-501)||(11944678-11944723)
chr8 (456-501)||(33405385-33405430)
chr8 (457-501)||(7658476-7658520)
chr8 (457-501)||(40332204-40332248)
chr8 (458-501)||(4611547-4611590)
chr8 (457-496)||(18964195-18964234)
chr8 (462-501)||(24362209-24362248)
chr8 (446-501)||(25566854-25566909)
chr8 (454-493)||(28384993-28385032)
chr8 (454-501)||(33382018-33382065)
chr8 (458-501)||(39954282-39954325)
chr8 (463-501)||(14731725-14731763)
chr8 (439-501)||(29447094-29447156)
chr8 (456-501)||(4948665-4948710)
chr8 (456-501)||(12985405-12985450)
chr8 (460-501)||(27213560-27213601)
[»] chr1 (49 HSPs)
chr1 (426-499)||(34371728-34371801)
chr1 (434-501)||(44482243-44482310)
chr1 (423-501)||(27471534-27471612)
chr1 (457-501)||(1864882-1864926)
chr1 (439-501)||(25361899-25361961)
chr1 (456-501)||(7918212-7918257)
chr1 (456-501)||(36878474-36878519)
chr1 (456-501)||(40181884-40181929)
chr1 (456-496)||(30749858-30749898)
chr1 (456-496)||(30771309-30771349)
chr1 (457-499)||(10233268-10233310)
chr1 (457-503)||(13997894-13997940)
chr1 (423-501)||(16164283-16164361)
chr1 (456-498)||(20157351-20157393)
chr1 (455-501)||(23636049-23636095)
chr1 (463-501)||(25098563-25098601)
chr1 (456-501)||(1486710-1486755)
chr1 (454-503)||(6415000-6415049)
chr1 (456-501)||(6427363-6427408)
chr1 (456-501)||(9629901-9629946)
chr1 (456-501)||(9709833-9709878)
chr1 (456-501)||(9828057-9828102)
chr1 (456-501)||(14332643-14332688)
chr1 (464-501)||(19324575-19324612)
chr1 (456-501)||(25272495-25272540)
chr1 (456-501)||(38503333-38503378)
chr1 (457-501)||(10572591-10572635)
chr1 (425-501)||(12713297-12713373)
chr1 (425-501)||(12717388-12717464)
chr1 (429-501)||(28273062-28273134)
chr1 (455-494)||(5898266-5898305)
chr1 (455-501)||(2784569-2784615)
chr1 (455-501)||(2896121-2896167)
chr1 (456-494)||(5944303-5944341)
chr1 (461-495)||(17705592-17705626)
chr1 (435-501)||(17754324-17754390)
chr1 (455-501)||(19562621-19562667)
chr1 (455-501)||(40258933-40258979)
chr1 (455-501)||(43492494-43492540)
chr1 (456-494)||(52903269-52903307)
chr1 (464-501)||(12443469-12443506)
chr1 (456-493)||(13436479-13436516)
chr1 (456-501)||(18337342-18337387)
chr1 (456-501)||(24577187-24577232)
chr1 (460-501)||(31015056-31015097)
chr1 (468-501)||(34298449-34298482)
chr1 (456-501)||(34712384-34712429)
chr1 (456-501)||(38075971-38076016)
chr1 (456-501)||(39953147-39953192)
[»] chr7 (36 HSPs)
chr7 (456-503)||(22602711-22602758)
chr7 (432-501)||(6630889-6630958)
chr7 (434-501)||(32308133-32308200)
chr7 (423-501)||(24339655-24339733)
chr7 (455-500)||(5835261-5835306)
chr7 (456-501)||(9482947-9482992)
chr7 (456-501)||(20549804-20549849)
chr7 (446-501)||(3520333-3520388)
chr7 (446-501)||(19206063-19206118)
chr7 (455-493)||(640134-640172)
chr7 (456-501)||(3721106-3721151)
chr7 (456-501)||(5548689-5548734)
chr7 (456-501)||(7328692-7328737)
chr7 (456-501)||(16341509-16341554)
chr7 (456-501)||(17307906-17307951)
chr7 (456-501)||(19992014-19992059)
chr7 (456-501)||(49107834-49107878)
chr7 (457-501)||(15902835-15902879)
chr7 (457-501)||(17851444-17851488)
chr7 (456-496)||(18213034-18213074)
chr7 (462-498)||(22868058-22868094)
chr7 (441-501)||(38134392-38134452)
chr7 (456-496)||(39138462-39138502)
chr7 (423-501)||(11665408-11665486)
chr7 (459-501)||(27732243-27732285)
chr7 (440-501)||(29787356-29787415)
chr7 (456-498)||(32287464-32287506)
chr7 (456-501)||(1401038-1401083)
chr7 (456-501)||(1433467-1433512)
chr7 (460-501)||(21140987-21141028)
chr7 (456-501)||(21880165-21880210)
chr7 (456-501)||(24146829-24146874)
chr7 (460-501)||(26329387-26329428)
chr7 (456-501)||(26733317-26733362)
chr7 (456-501)||(27945054-27945099)
chr7 (456-501)||(35297673-35297718)
[»] chr6 (41 HSPs)
chr6 (384-501)||(16766710-16766828)
chr6 (456-501)||(7265594-7265639)
chr6 (456-501)||(9025495-9025540)
chr6 (454-501)||(19044477-19044524)
chr6 (455-501)||(13360372-13360418)
chr6 (456-501)||(7377992-7378037)
chr6 (456-501)||(9617447-9617492)
chr6 (456-501)||(9629396-9629441)
chr6 (456-501)||(19040365-19040410)
chr6 (456-501)||(20371111-20371156)
chr6 (456-501)||(26562702-26562747)
chr6 (457-501)||(7086808-7086852)
chr6 (461-501)||(11591876-11591916)
chr6 (456-494)||(7027262-7027300)
chr6 (456-501)||(5732511-5732556)
chr6 (456-501)||(7996379-7996424)
chr6 (456-501)||(8022377-8022422)
chr6 (456-501)||(9027191-9027236)
chr6 (456-501)||(9195755-9195800)
chr6 (456-501)||(14155240-14155285)
chr6 (456-501)||(21924936-21924981)
chr6 (460-501)||(30866149-30866190)
chr6 (456-501)||(34073348-34073393)
chr6 (457-501)||(9658892-9658936)
chr6 (453-501)||(11784214-11784262)
chr6 (457-501)||(13364707-13364751)
chr6 (432-496)||(16488567-16488631)
chr6 (435-498)||(7248374-7248437)
chr6 (439-501)||(10294120-10294182)
chr6 (420-501)||(10339090-10339172)
chr6 (463-501)||(10888982-10889020)
chr6 (456-501)||(31579228-31579271)
chr6 (456-501)||(7151425-7151470)
chr6 (456-501)||(8931603-8931648)
chr6 (436-501)||(9107351-9107416)
chr6 (456-501)||(10770675-10770720)
chr6 (456-501)||(13851749-13851794)
chr6 (456-501)||(32320670-32320715)
chr6 (456-501)||(32511667-32511712)
chr6 (456-501)||(33001290-33001335)
chr6 (456-501)||(34595147-34595192)
[»] chr5 (26 HSPs)
chr5 (424-501)||(3966516-3966593)
chr5 (456-501)||(6471890-6471935)
chr5 (456-501)||(28588675-28588720)
chr5 (456-501)||(30502389-30502434)
chr5 (456-501)||(30542732-30542777)
chr5 (456-501)||(41091258-41091303)
chr5 (454-501)||(14873530-14873577)
chr5 (446-503)||(12264820-12264877)
chr5 (456-501)||(16203796-16203841)
chr5 (460-501)||(18421846-18421887)
chr5 (464-501)||(24273039-24273076)
chr5 (464-501)||(24389138-24389175)
chr5 (456-501)||(36838556-36838601)
chr5 (385-501)||(39698554-39698671)
chr5 (459-496)||(39758290-39758327)
chr5 (432-496)||(18592091-18592155)
chr5 (432-496)||(21814279-21814343)
chr5 (461-501)||(23015995-23016035)
chr5 (426-501)||(11685952-11686026)
chr5 (456-494)||(2436942-2436980)
chr5 (456-501)||(6247635-6247680)
chr5 (456-501)||(17925173-17925218)
chr5 (456-501)||(21191057-21191102)
chr5 (456-501)||(22423813-22423858)
chr5 (456-501)||(26312782-26312827)
chr5 (456-501)||(34879363-34879408)
[»] chr4 (26 HSPs)
chr4 (420-501)||(903935-904016)
chr4 (419-500)||(38148689-38148770)
chr4 (454-501)||(5775357-5775404)
chr4 (386-501)||(30982808-30982924)
chr4 (460-500)||(40613464-40613504)
chr4 (455-510)||(9996844-9996899)
chr4 (458-501)||(16189722-16189765)
chr4 (454-501)||(18576036-18576083)
chr4 (385-494)||(22234819-22234929)
chr4 (463-501)||(36635337-36635375)
chr4 (456-498)||(46160912-46160954)
chr4 (456-501)||(8423719-8423764)
chr4 (464-501)||(22440609-22440646)
chr4 (435-496)||(44132624-44132685)
chr4 (456-501)||(54580024-54580069)
chr4 (456-500)||(40179637-40179681)
chr4 (456-499)||(10499271-10499314)
chr4 (456-503)||(13783292-13783339)
chr4 (455-501)||(7214522-7214568)
chr4 (455-501)||(30103357-30103402)
chr4 (455-501)||(33950149-33950195)
chr4 (455-500)||(8402742-8402787)
chr4 (456-501)||(13134463-13134508)
chr4 (456-501)||(15029778-15029823)
chr4 (456-501)||(15659761-15659806)
chr4 (432-501)||(24613678-24613747)
[»] scaffold0036 (1 HSPs)
scaffold0036 (446-501)||(9738-9793)
[»] scaffold0003 (1 HSPs)
scaffold0003 (385-494)||(241614-241724)
[»] scaffold0020 (1 HSPs)
scaffold0020 (456-501)||(135313-135358)
[»] chr3 (32 HSPs)
chr3 (456-501)||(7928463-7928508)
chr3 (456-501)||(8789551-8789596)
chr3 (456-501)||(25093515-25093560)
chr3 (461-501)||(11658828-11658868)
chr3 (423-501)||(15796262-15796340)
chr3 (455-501)||(20691332-20691378)
chr3 (456-494)||(40993336-40993374)
chr3 (456-501)||(8039836-8039881)
chr3 (456-501)||(8383270-8383315)
chr3 (432-501)||(11665957-11666026)
chr3 (456-501)||(49505155-49505200)
chr3 (456-496)||(35222956-35222996)
chr3 (459-498)||(10690266-10690305)
chr3 (455-501)||(11251991-11252035)
chr3 (462-501)||(32804547-32804586)
chr3 (457-503)||(3962795-3962841)
chr3 (423-501)||(4987259-4987337)
chr3 (463-501)||(11313808-11313846)
chr3 (455-501)||(13807182-13807228)
chr3 (432-501)||(15812800-15812867)
chr3 (463-501)||(16192758-16192796)
chr3 (456-494)||(38731238-38731276)
chr3 (456-501)||(6780420-6780465)
chr3 (456-501)||(7614416-7614461)
chr3 (456-501)||(15314877-15314922)
chr3 (432-501)||(17005596-17005665)
chr3 (456-501)||(25948888-25948933)
chr3 (456-501)||(28918014-28918059)
chr3 (440-501)||(34910330-34910391)
chr3 (385-501)||(41961579-41961696)
chr3 (456-501)||(45451566-45451611)
chr3 (455-500)||(48202269-48202314)
[»] scaffold0044 (1 HSPs)
scaffold0044 (458-501)||(53193-53236)
[»] scaffold0623 (1 HSPs)
scaffold0623 (432-496)||(5973-6037)
[»] scaffold1528 (1 HSPs)
scaffold1528 (435-501)||(1048-1114)
[»] scaffold0279 (1 HSPs)
scaffold0279 (420-478)||(17845-17903)
[»] scaffold0171 (1 HSPs)
scaffold0171 (456-494)||(23440-23478)
[»] scaffold0022 (1 HSPs)
scaffold0022 (455-501)||(90856-90902)
[»] scaffold0316 (1 HSPs)
scaffold0316 (423-468)||(16180-16225)
[»] scaffold0236 (1 HSPs)
scaffold0236 (456-497)||(25769-25810)
[»] scaffold0050 (1 HSPs)
scaffold0050 (456-501)||(70291-70336)
[»] scaffold0008 (1 HSPs)
scaffold0008 (456-501)||(263373-263418)


Alignment Details
Target: chr2 (Bit Score: 680; Significance: 0; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 680; E-Value: 0
Query Start/End: Original strand, 19 - 762
Target Start/End: Original strand, 38355451 - 38356197
Alignment:
Q  19 caccataatcagatgaaagtccatagtttggagcacagaaatctgtaacagtaacaacgacagaaggacttccaatcaagcaccataaaatgtgatcaac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38355451 caccataatcagatgaaagtccatagtttggagcacagaaatctgtaacagtaacaacgacagaaggacttccaatcaagcaccataaaatgtgatcaac 38355550  T
Q  119 acatctaatctcataacaggcaccacaagtactccctttgttgaacaaaattgtgcttaacccagtactatatttcccataatcaaccttgtgaatgtct 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38355551 acatctaatctcataacaggcaccacaagtactccctttgttgaacaaaattgtgcttaacccagtactatatttcccataatcaaccttgtgaatgtct 38355650  T
Q  219 ccataaccacaagctccttctgtaatcaattcacaaccacattgtcaaaactaaaactggtgagtcccggaacccaacttacttaaacttttgtgcaaaa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38355651 ccataaccacaagctccttctgtaatcaattcacaaccacattgtcaaaactaaaactggagagtcccggaacccaacttacttaaacttttgtgcaaaa 38355750  T
Q  319 atattaggccagatggacaaacccatagcccgtaattttacatggactagttgtaaaacacaagcgctatgaagcacggacacttttcggattaaccatc 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  38355751 atattaggccagatggacaaacccatagcccgtaattttacatggactagttgtaaaacacaagcgctatgaagcacggacacttttcggattaaccgtc 38355850  T
Q  419 tccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaataactgtcagcatgtc-- 516  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |      
T  38355851 tccagtgttggacacgtgttgtatccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaataactgtcagcatgacaa 38355950  T
Q  517 tgtcatgtctagtgtatgtgtctgtcgtatccgtgc----tttacagcacaagcctaaaacgacttgggttttttatccggcccacagtagttgggcttg 612  Q
    |||| |||||||||||||||||   |||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38355951 tgtcgtgtctagtgtatgtgtc---cgtatccgtgctttatttacagcacaagcctaaaacgacttgggttttttatccggcccacagtagttgggcttg 38356047  T
Q  613 gctaaataatatgtagactaatatcaaatgggccgagccgattttactcatttacgtagttcatttgatagctctaaaaattacctgtaatgagagaccc 712  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38356048 gctaaataatatgtagactaatatcaaatgggccgagccgattttactcatttacgtagttcatttgacagctctaaaaattacctgtaatgagagaccc 38356147  T
Q  713 atctttatcttggatgtatgttgcagttgcagacttccactcttcatctc 762  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38356148 atctttatcttggatgtatgttgcagttgcagacttccactcttcatctc 38356197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 501
Target Start/End: Complemental strand, 44860395 - 44860333
Alignment:
Q  439 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||||| |||||||||||||    
T  44860395 gtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaat 44860333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 37411245 - 37411290
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  37411245 gacatcgacacatataatcacactgaattatgtgattttctcaaat 37411290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 5367250 - 5367205
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||    
T  5367250 gacaccgacacatataattacactgaattatgtgatttcctcaaat 5367205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 432 - 493
Target Start/End: Complemental strand, 28524508 - 28524447
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattt 493  Q
    ||||||||||||| ||||||| |  ||| ||||||||||||| |||||||||||||||||||    
T  28524508 acgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 499
Target Start/End: Original strand, 18889575 - 18889635
Alignment:
Q  439 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaa 499  Q
    |||||| |||| || | ||||||||||||||| || |||||||||||||||||||||||||    
T  18889575 gtgtccgacacaaacaagacaccgacacatatgattacactgaattatgtgattttctcaa 18889635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 20242728 - 20242768
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  20242728 gacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 499
Target Start/End: Complemental strand, 35056959 - 35056883
Alignment:
Q  423 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaa 499  Q
    |||| ||| |||||| |||||| ||||| | | |||||||||||||||||| |||||||||||| || |||||||||    
T  35056959 gtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 23718082 - 23718039
Alignment:
Q  458 caccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaat 23718039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 24105754 - 24105711
Alignment:
Q  458 caccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaat 24105711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 18276580 - 18276534
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  18276580 tgacaccgacacacataattacactgaattaagtgattttctcaaat 18276534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 501
Target Start/End: Complemental strand, 21616813 - 21616775
Alignment:
Q  463 acacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaat 21616775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 34691806 - 34691851
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  34691806 gacaccgacacatataattacactgaattatatgattttatcaaat 34691851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 34714218 - 34714263
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  34714218 gacaccgacacatataattacactgaattatatgattttatcaaat 34714263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 39279732 - 39279691
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctca 498  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctca 39279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 429 - 501
Target Start/End: Original strand, 12668397 - 12668469
Alignment:
Q  429 gatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| || ||||| ||| | | ||||||||||| |||||| |||||||||||||| ||||| ||||||    
T  12668397 gatacgtgtcgtatccaataccgacacgacaccgacacttataattacactgaattatgtcattttttcaaat 12668469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 34784983 - 34785023
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  34784983 gacaccgacacatataattacactaaattatgtgattttct 34785023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 501
Target Start/End: Complemental strand, 35449565 - 35449526
Alignment:
Q  462 gacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaat 35449526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 434 - 500
Target Start/End: Original strand, 11223842 - 11223908
Alignment:
Q  434 gtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaa 500  Q
    |||| |||||| ||||| | ||||||||||||| | |||| |||||||||||||| ||||| |||||    
T  11223842 gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttttcaaa 11223908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 501
Target Start/End: Complemental strand, 17776662 - 17776600
Alignment:
Q  439 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||| |  |||||| |||||||||||| ||||||| ||||||| |||||| ||||    
T  17776662 gtgtccaacaccgacttgacactgacacatataattacactgacttatgtggttttcttaaat 17776600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 30527599 - 30527641
Alignment:
Q  459 accgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||    
T  30527599 accgacacatataattacactaaattatatgattttctcaaat 30527641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 2331850 - 2331807
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||    
T  2331850 gacaccgacacata-aat-acactgaattatgtgattttctcaaat 2331807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 28677966 - 28677922
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||    
T  28677966 gacaccga-acatataattacactgaattatgtgattttttcaaat 28677922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 500
Target Start/End: Complemental strand, 30471093 - 30471052
Alignment:
Q  459 accgacacatataatcacactgaattatgtgattttctcaaa 500  Q
    ||||||||||||||| |||  |||||||||||||||||||||    
T  30471093 accgacacatataattacatcgaattatgtgattttctcaaa 30471052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 494
Target Start/End: Complemental strand, 31808134 - 31808097
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgatttt 494  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  31808134 acactgacacatataattacactgaattatgtgatttt 31808097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 42832277 - 42832322
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||| |||||||| ||||| ||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaat 42832322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 57122 - 56901
Alignment:
Q  19 caccataatcagatgaaagtccatagtttggagcacagaaatctgtaacagtaacaacgacagaaggacttccaatcaagcaccataaaatgtgatcaac 118  Q
    |||||||||||  ||| || ||| | || |||| ||||||||| ||  |||||||||  |||||||||||||||| ||  ||||| || || || |||||    
T  57122 caccataatcaactgagaggccaaaattaggaggacagaaatcagtggcagtaacaataacagaaggacttccaagcatacaccacaagatatggtcaac 57023  T
Q  119 acatctaatctcataacaggcaccacaagtactccctttgttgaacaaaattgtgcttaacccagtactatatttcccataatcaaccttgtgaatgtct 218  Q
    |||||| |||||||| || || ||||| ||||||||| |||||||||||||||||||||| |||  ||||| ||| |||||   | | |||||||  |||    
T  57022 acatctgatctcatagcaagccccacatgtactccctctgttgaacaaaattgtgcttaatccaacactatgttttccatagctagctttgtgaagatct 56923  T
Q  219 ccataaccacaagctccttctg 240  Q
    ||||||||||||||||||||||    
T  56922 ccataaccacaagctccttctg 56901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 385 - 501
Target Start/End: Original strand, 44454 - 44571
Alignment:
Q  385 ctatgaagcacggacacttttcggattaaccatctcc-agtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 483  Q
    ||||||||||| ||||||| || |||||||||| ||| ||||| ||| ||||||||||||||||||| | | || ||||||||||||||| |||||||||    
T  44454 ctatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaat 44553  T
Q  484 tatgtgattttctcaaat 501  Q
    ||||||||||||||||||    
T  44554 tatgtgattttctcaaat 44571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 501
Target Start/End: Original strand, 15816057 - 15816175
Alignment:
Q  384 gctatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaa 482  Q
    |||||||||||||||||||| ||||||||  | | ||| | ||| |||| ||||| |||||| ||||||| | ||||||||||| |||||| ||||| ||    
T  15816057 gctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaa 15816156  T
Q  483 ttatgtgattttctcaaat 501  Q
    |||||||||||| ||||||    
T  15816157 ttatgtgattttttcaaat 15816175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 501
Target Start/End: Original strand, 11927055 - 11927132
Alignment:
Q  424 tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| ||| ||||   ||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||    
T  11927055 tgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaat 11927132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 432 - 496
Target Start/End: Original strand, 26902152 - 26902216
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||| |||||| ||||  ||| |||||||||||||||||| ||||||||||||||||||||||    
T  26902152 acgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 14134758 - 14134712
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  14134758 tgacaccgacatatataattacactgaattatgtgattttctcaaat 14134712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 4786339 - 4786384
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttcttaaat 4786384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 385 - 501
Target Start/End: Complemental strand, 11803389 - 11803272
Alignment:
Q  385 ctatgaagcacggacacttttcggattaaccatct-ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 483  Q
    ||||||||||||||||||  ||||||||  | | | || |||| ||| | |||| || ||||||||||| |  ||||| ||||||||||| |||||||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaat 11803290  T
Q  484 tatgtgattttctcaaat 501  Q
    ||||||||||||| ||||    
T  11803289 tatgtgattttcttaaat 11803272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 13844597 - 13844642
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  13844597 gacaccgacacatataattacactcaattatgtgattttctcaaat 13844642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 34897143 - 34897098
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  34897143 gacatcgacacatataattacactgaattatgtgattttctcaaat 34897098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 501
Target Start/End: Original strand, 31236580 - 31236623
Alignment:
Q  458 caccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||| ||| |||||||||||||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaat 31236623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 12606829 - 12606875
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  12606829 tgacaccgacacatataattacattgaattatatgattttctcaaat 12606875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 20679395 - 20679441
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||    
T  20679395 tgacaccgacacttataattacactgaactatgtgattttctcaaat 20679441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 3025609 - 3025564
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||    
T  3025609 gacactgacacctataattacactgaattatgtgattttctcaaat 3025564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 8847314 - 8847277
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattt 493  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8847314 gacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 11944723 - 11944678
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||    
T  11944723 gacaccgacacatataattacactgagttatgtgattttatcaaat 11944678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 33405385 - 33405430
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||    
T  33405385 gacaccgacacatataattacactaaattatgtgtttttctcaaat 33405430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 7658520 - 7658476
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaat 7658476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 40332248 - 40332204
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| | |||| |||||||||||||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaat 40332204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 4611590 - 4611547
Alignment:
Q  458 caccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||    
T  4611590 caccgagacatataattacactgaattatgttattttctcaaat 4611547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 496
Target Start/End: Complemental strand, 18964234 - 18964195
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttct 496  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  18964234 acaccgacacatataattacattgaattatgtgattttct 18964195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 501
Target Start/End: Original strand, 24362209 - 24362248
Alignment:
Q  462 gacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaat 24362248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 501
Target Start/End: Complemental strand, 25566909 - 25566854
Alignment:
Q  446 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| | ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  25566909 acaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaat 25566854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 493
Target Start/End: Original strand, 28384993 - 28385032
Alignment:
Q  454 atgacaccgacacatataatcacactgaattatgtgattt 493  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  28384993 atgacaccgacacatataattacactgaattatgagattt 28385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 33382018 - 33382065
Alignment:
Q  454 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||||| || ||||||||||| ||||||| ||||    
T  33382018 atgacaccgacacatataattactctgaattatgtcattttcttaaat 33382065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 501
Target Start/End: Original strand, 39954282 - 39954325
Alignment:
Q  458 caccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||    
T  39954282 caccgtcacatataattacactaaattatgtgattttctcaaat 39954325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 501
Target Start/End: Complemental strand, 14731763 - 14731725
Alignment:
Q  463 acacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaat 14731725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 501
Target Start/End: Original strand, 29447094 - 29447156
Alignment:
Q  439 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||| | ||||||||||||| | || | ||| |||||||||||||||||||||||    
T  29447094 gtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaat 29447156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 4948710 - 4948665
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  4948710 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 4948665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 12985450 - 12985405
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| |||| || ||| |||||||||||||||||||||||    
T  12985450 gacaccgacatatatgattacattgaattatgtgattttctcaaat 12985405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 27213601 - 27213560
Alignment:
Q  460 ccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||| ||| |||||||||||||||||| ||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaat 27213560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 8e-17; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 426 - 499
Target Start/End: Complemental strand, 34371801 - 34371728
Alignment:
Q  426 ttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaa 499  Q
    ||||| |||||| || ||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  34371801 ttggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 434 - 501
Target Start/End: Complemental strand, 44482310 - 44482243
Alignment:
Q  434 gtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| |||||| ||||| | | |||||||||||||||||| |||||||||||||||||||||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaat 44482243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 27471534 - 27471612
Alignment:
Q  423 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||| |||||| || ||||||||| |||||||||| |||||| |||| ||||||||||||||| |||||||||||    
T  27471534 gtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaat 27471612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 1864882 - 1864926
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaat 1864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 501
Target Start/End: Complemental strand, 25361961 - 25361899
Alignment:
Q  439 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||| | | ||||| |||||||||||| |||||||||||||||||||||||||||    
T  25361961 gtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttctcaaat 25361899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 7918212 - 7918257
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  7918212 gacactgacacatataattacactgaattatgtgattttctcaaat 7918257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 36878519 - 36878474
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaat 36878474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 40181929 - 40181884
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  40181929 gacaccgatacatataattacactgaattatgtgattttctcaaat 40181884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 30749898 - 30749858
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  30749898 gacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 30771349 - 30771309
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  30771349 gacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 499
Target Start/End: Complemental strand, 10233310 - 10233268
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaa 499  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaa 10233268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 13997940 - 13997894
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaataa 503  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataa 13997894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 16164283 - 16164361
Alignment:
Q  423 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||| |||||||| |||||||||||| | ||||  |||||||||||| ||| | |||||||||||||| ||||||    
T  16164283 gtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaat 16164361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 20157351 - 20157393
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctca 498  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  20157351 gacaccgacacatatgattacactgaattatgtgattttctca 20157393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 23636049 - 23636095
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  23636049 tgacaccgacacatacaattacactgaattatgtaattttctcaaat 23636095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 25098563 - 25098601
Alignment:
Q  463 acacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaat 25098601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 1486710 - 1486755
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||    
T  1486710 gacaccgacacttataattacactgaattatgtgattttttcaaat 1486755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 503
Target Start/End: Original strand, 6415000 - 6415049
Alignment:
Q  454 atgacaccgacacatataatcacactgaattatgtgattttctcaaataa 503  Q
    ||||||||||||||| |||| | |||| ||||||||||||||||||||||    
T  6415000 atgacaccgacacatctaattaaactgtattatgtgattttctcaaataa 6415049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 6427408 - 6427363
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||||    
T  6427408 gacaccaacacatataattacattgaattatgtgattttctcaaat 6427363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 9629901 - 9629946
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  9629901 gacaccgacacttataatcacactgaattatatgattttatcaaat 9629946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 9709878 - 9709833
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||    
T  9709878 gacaccgacacatataattacaacgaattatgtgattttctcaaat 9709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 9828102 - 9828057
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||    
T  9828102 gacaccgacacataaaattacactgaattatgtgattttatcaaat 9828057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 14332643 - 14332688
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||    
T  14332643 gacaccgagacatataattacactaaattatgtgattttctcaaat 14332688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 501
Target Start/End: Complemental strand, 19324612 - 19324575
Alignment:
Q  464 cacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaat 19324575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 25272540 - 25272495
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  25272540 gacaccgacacttataattacactaaattatgtgattttctcaaat 25272495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 38503378 - 38503333
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaat 38503333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 10572591 - 10572635
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaat 10572635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 12713297 - 12713373
Alignment:
Q  425 gttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| | ||||| | || ||||| | ||||||||| ||||| |||||||||||||||| ||||    
T  12713297 gttggacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaat 12713373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 12717388 - 12717464
Alignment:
Q  425 gttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| | ||||| | || ||||| | ||||||||| ||||| |||||||||||||||| ||||    
T  12717388 gttggacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttcttaaat 12717464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 429 - 501
Target Start/End: Original strand, 28273062 - 28273134
Alignment:
Q  429 gatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| |||||| ||| | ||| ||||||||||| | |||| |||||||||||| ||||||| ||||||    
T  28273062 gatacgtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaat 28273134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 494
Target Start/End: Original strand, 5898266 - 5898305
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgatttt 494  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  5898266 tgacaccgacgcatataattacactgaattatgtgatttt 5898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 2784615 - 2784569
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||||||| | ||| |||||||||||||||| ||||    
T  2784615 tgacaccgacacatataattatactcaattatgtgattttcttaaat 2784569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 2896121 - 2896167
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||   |||||||||||||||||||||||||||    
T  2896121 tgacaccgacatatatagctacactgaattatgtgattttctcaaat 2896167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 494
Target Start/End: Complemental strand, 5944341 - 5944303
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgatttt 494  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  5944341 gacaccgacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 461 - 495
Target Start/End: Original strand, 17705592 - 17705626
Alignment:
Q  461 cgacacatataatcacactgaattatgtgattttc 495  Q
    ||||||||||||| |||||||||||||||||||||    
T  17705592 cgacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 435 - 501
Target Start/End: Complemental strand, 17754390 - 17754324
Alignment:
Q  435 tgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||| | |  |||| |||||||||| | |||||||||||||| ||||| ||||||    
T  17754390 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaat 17754324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 19562621 - 19562667
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||||    
T  19562621 tgacacctacacatataattacactgaactatgagattttctcaaat 19562667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 40258933 - 40258979
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||| | |||| |||||||||||||||||||| ||||||    
T  40258933 tgacaccgacacttgtaattacactgaattatgtgattttttcaaat 40258979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 43492494 - 43492540
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||| ||||| |||| |||||| |||||||||||||||    
T  43492494 tgacaccgacacacataattacaccgaattacgtgattttctcaaat 43492540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 494
Target Start/End: Complemental strand, 52903307 - 52903269
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgatttt 494  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  52903307 gacaccgacacatataattacactgaattatatgatttt 52903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 501
Target Start/End: Original strand, 12443469 - 12443506
Alignment:
Q  464 cacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaat 12443506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 13436516 - 13436479
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattt 493  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  13436516 gacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 18337387 - 18337342
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  18337387 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 18337342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 24577187 - 24577232
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  24577187 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 24577232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 501
Target Start/End: Complemental strand, 31015097 - 31015056
Alignment:
Q  460 ccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| | |||| |||||||||||||||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaat 31015056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 501
Target Start/End: Complemental strand, 34298482 - 34298449
Alignment:
Q  468 tataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| |||||||||||||||||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaat 34298449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 34712384 - 34712429
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| |||||||||||| ||||| |||||||| ||||||||||||    
T  34712384 gacactgacacatataattacactaaattatgttattttctcaaat 34712429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 38075971 - 38076016
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||| || ||||||| ||||||||||| |||||||    
T  38075971 gacaccgacacatatgattacactgacttatgtgatttactcaaat 38076016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 39953147 - 39953192
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||| ||| ||||| |||||||||||||||| ||||    
T  39953147 gacaccgacacatacaattacactaaattatgtgattttctaaaat 39953192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 22602711 - 22602758
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaataa 503  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttctcaaataa 22602758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 432 - 501
Target Start/End: Original strand, 6630889 - 6630958
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||| ||||||| | |||| ||||||||||||| ||||||||||| |||| ||||||||||    
T  6630889 acgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaat 6630958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 434 - 501
Target Start/End: Complemental strand, 32308200 - 32308133
Alignment:
Q  434 gtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| |||||||||||| | | ||||| |||||||| ||| |||||||||||||||||||||||||||    
T  32308200 gtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaat 32308133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 501
Target Start/End: Complemental strand, 24339733 - 24339655
Alignment:
Q  423 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| |||||||||| |||||| ||||| | | ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  24339733 gtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaat 24339655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 455 - 500
Target Start/End: Complemental strand, 5835306 - 5835261
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaa 500  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||    
T  5835306 tgacaccgacacatataattacactgaattatgttattttctcaaa 5835261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 9482992 - 9482947
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaat 9482947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 20549849 - 20549804
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  20549849 gacaccgacacatataattacactgaattacgtgattttctcaaat 20549804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 3520333 - 3520388
Alignment:
Q  446 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| ||| |||||||||||||||| ||| |||||||| ||||||||||||||    
T  3520333 acaccaacatgtcaccgacacatataattacattgaattatatgattttctcaaat 3520388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 446 - 501
Target Start/End: Complemental strand, 19206118 - 19206063
Alignment:
Q  446 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| | |||||||||||||||||| | | |||||||||||||||||||||||    
T  19206118 acaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaat 19206063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 493
Target Start/End: Complemental strand, 640172 - 640134
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattt 493  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  640172 tgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 3721151 - 3721106
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||    
T  3721151 gacaccgacacatataattatactaaattatgtgattttctcaaat 3721106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 5548734 - 5548689
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||    
T  5548734 gacactgacacatataattacactgaattatttgattttctcaaat 5548689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 7328692 - 7328737
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttctcaaat 7328737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 16341554 - 16341509
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||    
T  16341554 gacaccggcacatataattacacttaattatgtgattttctcaaat 16341509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 17307951 - 17307906
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||    
T  17307951 gacaccaacacatataattacactgaattatgttattttctcaaat 17307906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 19992059 - 19992014
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttctcaaat 19992014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 49107878 - 49107834
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  49107878 gacaccgacacatataatcacactcaattatgtg-ttttctcaaat 49107834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 15902879 - 15902835
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaat 15902835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 17851488 - 17851444
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaat 17851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 18213034 - 18213074
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  18213034 gacaccgacacatataattacactaaattatgtgattttct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 498
Target Start/End: Complemental strand, 22868094 - 22868058
Alignment:
Q  462 gacacatataatcacactgaattatgtgattttctca 498  Q
    |||||||||||| ||||||||||||||||||||||||    
T  22868094 gacacatataattacactgaattatgtgattttctca 22868058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 38134392 - 38134452
Alignment:
Q  441 gtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| | |||| |||||||||||| || ||| |||||||||| ||||||||||||    
T  38134392 gtccaacacccacatgagaccgacacatatgattacattgaattatgtcattttctcaaat 38134452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 39138502 - 39138462
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  39138502 gacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 11665408 - 11665486
Alignment:
Q  423 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||| |||||| |||| | ||||| | |||||| |||||| |||||| | |||||||||||||||||| ||||||    
T  11665408 gtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgattttttcaaat 11665486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 27732243 - 27732285
Alignment:
Q  459 accgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||    
T  27732243 accgacacatataattacactgaattatgtaattttcttaaat 27732285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 440 - 501
Target Start/End: Original strand, 29787356 - 29787415
Alignment:
Q  440 tgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | || ||||| |||||||  || |||||||||||||||||||||||||||    
T  29787356 tgtccaacaccgacattacaccaacacata--attacactgaattatgtgattttctcaaat 29787415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 32287464 - 32287506
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctca 498  Q
    |||||||||||||||| |  |||||||||||||||||||||||    
T  32287464 gacaccgacacatatacttgcactgaattatgtgattttctca 32287506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 1401083 - 1401038
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||| || |||||| |||||||||||||||| ||||||||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaat 1401038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 1433512 - 1433467
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||  ||| |||||||||||||||||    
T  1433512 gacaccgacacatataattacaccaaatgatgtgattttctcaaat 1433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 21140987 - 21141028
Alignment:
Q  460 ccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||    
T  21140987 ccgacacctataatcacactgaattatatgattttcttaaat 21141028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 21880210 - 21880165
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||| ||||||||||||    
T  21880210 gacaccgacacttgtaattacactgaattatgtaattttctcaaat 21880165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 24146874 - 24146829
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| | | |||||||||||||||||| ||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaat 24146829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 26329387 - 26329428
Alignment:
Q  460 ccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||| |||||||||| |||| |||||||||||    
T  26329387 ccgacacatataattacactgaattgtgtgtttttctcaaat 26329428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 26733362 - 26733317
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||| |||| | |||||||||||||||||| ||||||    
T  26733362 gacaccgacacatttaattagactgaattatgtgattttgtcaaat 26733317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 27945099 - 27945054
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||| ||||||||||||    
T  27945099 gacaccgacacttgtaattacactgaattatgtaattttctcaaat 27945054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 35297673 - 35297718
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| | | |||||||||||||||||||||||    
T  35297673 gacaccaacacatataattataatgaattatgtgattttctcaaat 35297718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 384 - 501
Target Start/End: Complemental strand, 16766828 - 16766710
Alignment:
Q  384 gctatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaa 482  Q
    ||||||||||||||||| | |||||||||  | | ||| | ||| ||| ||||||||||||| ||||| | | ||||||||||| | |||| ||||||||    
T  16766828 gctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaa 16766729  T
Q  483 ttatgtgattttctcaaat 501  Q
    |||||||||||| ||||||    
T  16766728 ttatgtgattttttcaaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 7265594 - 7265639
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  7265594 gacaccgacacatataattacactgaattatgtgattttctcaaat 7265639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 9025495 - 9025540
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttctcaaat 9025540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 454 - 501
Target Start/End: Complemental strand, 19044524 - 19044477
Alignment:
Q  454 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  19044524 atgacaccgacacatataataacactgaattatgtgatattctcaaat 19044477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 13360372 - 13360418
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  13360372 tgacaccgaaacatataattacactgaattatgtgattttctcaaat 13360418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 7378037 - 7377992
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  7378037 gacaccgacacatataattacattgaattatgtgattttctcaaat 7377992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 9617492 - 9617447
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttctcaaat 9617447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 9629441 - 9629396
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttctcaaat 9629396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 19040410 - 19040365
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  19040410 gacacagacacatataattacactgaattatgtgattttctcaaat 19040365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 20371111 - 20371156
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  20371111 gacaccgacacatataatcacattgagttatgtgattttctcaaat 20371156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 26562747 - 26562702
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  26562747 gacatcgacacatataattacactgaattatgtgattttctcaaat 26562702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 7086852 - 7086808
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaat 7086808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 501
Target Start/End: Original strand, 11591876 - 11591916
Alignment:
Q  461 cgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaat 11591916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 494
Target Start/End: Complemental strand, 7027300 - 7027262
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgatttt 494  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 5732511 - 5732556
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||    
T  5732511 gacaccgacacatataattacactaaaatatgtgattttctcaaat 5732556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 7996379 - 7996424
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||    
T  7996379 gacaccgacgcatataattacactgaattatatgattttctcaaat 7996424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 8022422 - 8022377
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||    
T  8022422 gacaccgacgcatataattacactgaattatatgattttctcaaat 8022377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 9027236 - 9027191
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||    
T  9027236 gacaccgacacatataattacacggaattatgtgattatctcaaat 9027191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 9195755 - 9195800
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttctcaaat 9195800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 14155240 - 14155285
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||    
T  14155240 gacaccaacacatgtaatcacactgtattatgtgattttctcaaat 14155285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 21924936 - 21924981
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||    
T  21924936 gacaccgacacatataattacactgaattatttgatattctcaaat 21924981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 30866149 - 30866190
Alignment:
Q  460 ccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaat 30866190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 34073348 - 34073393
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  34073348 gacaccgacccatataattacactgaattatgagattttctcaaat 34073393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 9658936 - 9658892
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaat 9658892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 501
Target Start/End: Original strand, 11784214 - 11784262
Alignment:
Q  453 tatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||| ||||||| ||||||| | |||||||||||||||||    
T  11784214 tatgacaccgacatatataattacactgattcatgtgattttctcaaat 11784262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 501
Target Start/End: Original strand, 13364707 - 13364751
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||| || |||||||||||| ||||||||||||||    
T  13364707 acaccgacacatatgattacactgaattatatgattttctcaaat 13364751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 496
Target Start/End: Original strand, 16488567 - 16488631
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||| |||||| ||||| | | |||||||||||||||||| |||||| ||| |||||||||||    
T  16488567 acgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttct 16488631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 498
Target Start/End: Complemental strand, 7248437 - 7248374
Alignment:
Q  435 tgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctca 498  Q
    |||||||||||||||| | | ||| || ||||||||||| || |||||||||||||||| ||||    
T  7248437 tgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgatttcctca 7248374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 501
Target Start/End: Complemental strand, 10294182 - 10294120
Alignment:
Q  439 gtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||| | |||||||||||||||||| ||| |||| |||| |||| ||||||||    
T  10294182 gtgtccgacaccaacacgacaccgacacatataattacattgaaatatgcgattatctcaaat 10294120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 420 - 501
Target Start/End: Original strand, 10339090 - 10339172
Alignment:
Q  420 ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatca-cactgaattatgtgattttctcaaat 501  Q
    ||||||| ||| | |||| |||||| ||||| | | | ||| |||||||||||| | ||||||||||||||||||||||||||    
T  10339090 ccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgattttctcaaat 10339172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 10888982 - 10889020
Alignment:
Q  463 acacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  10888982 acacatataatcacactaaattatgtgattttatcaaat 10889020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 31579228 - 31579271
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||  || |||||||||||||||||||||||||||    
T  31579228 gacaccgacacata--attacactgaattatgtgattttctcaaat 31579271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 7151470 - 7151425
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| ||||| |||||||||||||| ||||||    
T  7151470 gacaccaacacatataattacacttaattatgtgattttttcaaat 7151425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 8931603 - 8931648
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||||||||||||| | |||||||||||| ||||||||||||    
T  8931603 gacatcgacacatataattatactgaattatgttattttctcaaat 8931648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 501
Target Start/End: Original strand, 9107351 - 9107416
Alignment:
Q  436 gttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| ||||| | | ||||||||||| | |||| |||||||||| ||||||||| ||||||    
T  9107351 gttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaat 9107416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 10770675 - 10770720
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  10770675 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 10770720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 13851794 - 13851749
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||||||||||||| ||||||||||| || ||||||||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaat 13851749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 32320670 - 32320715
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||| ||||||||| ||| |||||||||||||||| ||||||    
T  32320670 gacaccgatacatataatgacattgaattatgtgattttatcaaat 32320715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 32511667 - 32511712
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| |||| |||||| |||||||||||||||||||||| ||||    
T  32511667 gacaccaacacttataattacactgaattatgtgattttcttaaat 32511712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 33001290 - 33001335
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||| | |||||||||||||| ||||||    
T  33001290 gacaccgacacatataattacatttaattatgtgattttttcaaat 33001335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 34595192 - 34595147
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  34595192 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 34595147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 501
Target Start/End: Complemental strand, 3966593 - 3966516
Alignment:
Q  424 tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| || |||||||||| ||||  | | |||||||||||||||||| |||||||||| ||||||||||||||||    
T  3966593 tgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaat 3966516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 6471890 - 6471935
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||    
T  6471890 gacacccacacatataattacactgaattatgtgattttctcaaat 6471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 28588675 - 28588720
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||    
T  28588675 gacaccgacacctataattacactgaattatgtgattttctcaaat 28588720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 30502389 - 30502434
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  30502389 gacaccgacacatataattacactgaattaagtgattttctcaaat 30502434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 30542732 - 30542777
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  30542732 gacaccgacacatataattacactgaattaagtgattttctcaaat 30542777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 41091258 - 41091303
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  41091258 gacatcgacacatataattacactgaattatgtgattttctcaaat 41091303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 454 - 501
Target Start/End: Complemental strand, 14873577 - 14873530
Alignment:
Q  454 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  14873577 atgacaccgacacatataattacactaaattatgtgcttttctcaaat 14873530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 12264820 - 12264877
Alignment:
Q  446 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaataa 503  Q
    ||||| ||||||||  |||||||||||| ||||||||| |||| ||||||||||||||    
T  12264820 acaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaataa 12264877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 16203796 - 16203841
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||    
T  16203796 gacaccgacacatataattacactaaattatgagattttctcaaat 16203841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 501
Target Start/End: Original strand, 18421846 - 18421887
Alignment:
Q  460 ccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  18421846 ccgacacatataattacactggattatgtgattttctcaaat 18421887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 501
Target Start/End: Original strand, 24273039 - 24273076
Alignment:
Q  464 cacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaat 24273076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 501
Target Start/End: Complemental strand, 24389175 - 24389138
Alignment:
Q  464 cacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaat 24389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 36838601 - 36838556
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttctcaaat 36838556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 501
Target Start/End: Complemental strand, 39698671 - 39698554
Alignment:
Q  385 ctatgaagcacggacacttttcggattaaccatctc-cagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 483  Q
    ||||||||||||||||||  ||||||||  | | || | |||| |||||| ||| |||||| ||||| | | ||||| ||||| | |||| |||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  484 tatgtgattttctcaaat 501  Q
    ||||||||||| ||||||    
T  39698571 tatgtgattttttcaaat 39698554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 496
Target Start/End: Complemental strand, 39758327 - 39758290
Alignment:
Q  459 accgacacatataatcacactgaattatgtgattttct 496  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  39758327 accgacacatataattacactgaattatgtgattttct 39758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 496
Target Start/End: Complemental strand, 18592155 - 18592091
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 496  Q
    ||||||||||||| ||||| | | ||||||| |||||||||| ||| |||||||||| |||||||    
T  18592155 acgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattatgtaattttct 18592091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 496
Target Start/End: Complemental strand, 21814343 - 21814279
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||| |||||| ||||| | | |||||||||||||||||| |||||| ||| |||||||||||    
T  21814343 acgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttct 21814279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 501
Target Start/End: Original strand, 23015995 - 23016035
Alignment:
Q  461 cgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaat 23016035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 501
Target Start/End: Complemental strand, 11686026 - 11685952
Alignment:
Q  426 ttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| |||||| |||||| ||||| | | |||||||||||||||||| ||||| ||||||| || ||||||||||    
T  11686026 ttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaat 11685952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 494
Target Start/End: Complemental strand, 2436980 - 2436942
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgatttt 494  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  2436980 gacaccgacacatataatcacaacgaattatgtgatttt 2436942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 6247680 - 6247635
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  6247680 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 6247635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 17925173 - 17925218
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||| || ||| |||||||||||||||||| ||||    
T  17925173 gacaccgacacatattattacattgaattatgtgattttcttaaat 17925218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 21191057 - 21191102
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  21191057 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 21191102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 22423813 - 22423858
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| ||||||| | | |||||||||||||||||||||||    
T  22423813 gacaccgacatatataattatattgaattatgtgattttctcaaat 22423858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 26312827 - 26312782
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||| ||||||||| |||||||||||  ||||||||||||||    
T  26312827 gacaccgatacatataattacactgaattaattgattttctcaaat 26312782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 34879408 - 34879363
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| |||||||||| || |||||||||||| ||||||||||||||    
T  34879408 gacatcgacacatattattacactgaattatatgattttctcaaat 34879363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 420 - 501
Target Start/End: Complemental strand, 904016 - 903935
Alignment:
Q  420 ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| ||| || ||| |||||||||||| ||| || || || ||||||||| |||||||||||||||||||||||||||    
T  904016 ccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaat 903935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 500
Target Start/End: Original strand, 38148689 - 38148770
Alignment:
Q  419 tccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaa 500  Q
    ||||||||  ||||||||| |||||||||||||| | |||| |||||  || ||| ||||||||||||||||||||||||||    
T  38148689 tccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaa 38148770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 5775357 - 5775404
Alignment:
Q  454 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  5775357 atgacaccgacacatataattacacttaattatgtgattttctcaaat 5775404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 501
Target Start/End: Original strand, 30982808 - 30982924
Alignment:
Q  386 tatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaatt 484  Q
    ||||||||||||||||| || ||||||  | | ||| | ||| ||| |||||| |||||  ||||| | | ||||||||||| |||||| |||||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  485 atgtgattttctcaaat 501  Q
    |||||||||||||||||    
T  30982908 atgtgattttctcaaat 30982924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 500
Target Start/End: Complemental strand, 40613504 - 40613464
Alignment:
Q  460 ccgacacatataatcacactgaattatgtgattttctcaaa 500  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaa 40613464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 455 - 510
Target Start/End: Complemental strand, 9996899 - 9996844
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaataactgtcag 510  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||| | ||||||    
T  9996899 tgacaccgagacatataattatactgaattatgtgattttctcaaattattgtcag 9996844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 16189765 - 16189722
Alignment:
Q  458 caccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| ||||| |||||||||||||||||||||||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaat 16189722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 454 - 501
Target Start/End: Original strand, 18576036 - 18576083
Alignment:
Q  454 atgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  18576036 atgacaccaacacatataattacaccgaattatgtgattttctcaaat 18576083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 494
Target Start/End: Original strand, 22234819 - 22234929
Alignment:
Q  385 ctatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 483  Q
    |||||||||||| |||||| |||||||| |  | ||| | ||| ||| |||||| |||||  ||||| | | |||||||||||||| ||| |||||||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaat 22234918  T
Q  484 tatgtgatttt 494  Q
    |||||||||||    
T  22234919 tatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 501
Target Start/End: Complemental strand, 36635375 - 36635337
Alignment:
Q  463 acacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaat 36635337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 46160954 - 46160912
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctca 498  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  46160954 gacaccgacacatataataacactgaattatgttattttctca 46160912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 8423719 - 8423764
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||    
T  8423719 gacaccgacatttataattacactgaattatgtgattttctcaaat 8423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 501
Target Start/End: Original strand, 22440609 - 22440646
Alignment:
Q  464 cacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| |||||||||||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaat 22440646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 435 - 496
Target Start/End: Original strand, 44132624 - 44132685
Alignment:
Q  435 tgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||||| | ||||||| | |||||||||||||||||| | ||||||||| ||||||||||    
T  44132624 tgttgtgttcgacaccaacacgacaccgacacatataattatactgaattacgtgattttct 44132685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 54580024 - 54580069
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||    
T  54580024 gacaccgacacttataattacactgaattatgtgattttttcaaat 54580069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 500
Target Start/End: Original strand, 40179637 - 40179681
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaa 500  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||    
T  40179637 gacaccgacgcatataattacactgaattatgtgattttttcaaa 40179681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 10499271 - 10499314
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaa 499  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||    
T  10499271 gacactgacacatataattacactaaattatgtgattttctcaa 10499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 503
Target Start/End: Complemental strand, 13783339 - 13783292
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaataa 503  Q
    ||||||| |||||||||| |||||||||| |||||| |||||||||||    
T  13783339 gacaccggcacatataattacactgaattttgtgatcttctcaaataa 13783292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 7214522 - 7214568
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| |||||||| ||| | |||||||||||||||||||||    
T  7214522 tgacaccgacgcatataattacattaaattatgtgattttctcaaat 7214568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Original strand, 30103357 - 30103402
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||| || ||||| |||||||||||||||||||||    
T  30103357 tgacaccgacacatatgattacact-aattatgtgattttctcaaat 30103402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 33950195 - 33950149
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||| || ||| | |||||||||||||||||||||    
T  33950195 tgacaccgacacatatgattacattaaattatgtgattttctcaaat 33950149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 500
Target Start/End: Original strand, 8402742 - 8402787
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaa 500  Q
    |||||| || ||||||||| |||||||||||| |||||||||||||    
T  8402742 tgacactgagacatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 13134508 - 13134463
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||||||||||||| ||||| |||||||||||||||| ||||    
T  13134508 gacatcgacacatataattacactaaattatgtgattttcttaaat 13134463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 15029823 - 15029778
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| ||||||||||||||||| || ||||||    
T  15029823 gacaccaacacatataattacactgaattatgtgatattttcaaat 15029778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 15659761 - 15659806
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| |||| |||||||| |||||||||||||    
T  15659761 gacaccaacacatataattacaccgaattatgagattttctcaaat 15659806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 501
Target Start/End: Original strand, 24613678 - 24613747
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| |||||  ||||| | ||||||||||||| | || | ||| |||||||||||||||||||||||    
T  24613678 acgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaat 24613747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 9738 - 9793
Alignment:
Q  446 acaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||    
T  9738 acaccaacacgacaccgacacatataattacactgaattaagtgattttctcaaat 9793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 494
Target Start/End: Complemental strand, 241724 - 241614
Alignment:
Q  385 ctatgaagcacggacacttttcggattaaccatctccag-tgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 483  Q
    ||||||||||||||||||| ||||||||  | | ||| | ||| ||| |||||| |||||| ||||||| | |||||||||||  ||||| ||||| |||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaat 241625  T
Q  484 tatgtgatttt 494  Q
    |||||||||||    
T  241624 tatgtgatttt 241614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 135313 - 135358
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaat 135358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000005; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 7928508 - 7928463
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||    
T  7928508 gacaccgacacatataattacactgaattatgtgattttttcaaat 7928463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 8789551 - 8789596
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  8789551 gacaccgacacatataattacacggaattatgtgattttctcaaat 8789596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 25093560 - 25093515
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||    
T  25093560 gacaccgacacatataattacactgaattgtgtgattttctcaaat 25093515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 501
Target Start/End: Complemental strand, 11658868 - 11658828
Alignment:
Q  461 cgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaat 11658828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 15796262 - 15796340
Alignment:
Q  423 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||| ||||||||||||| ||||| | | ||||||||||  | |||| |||||||||||| ||||||| ||||||    
T  15796262 gtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaat 15796340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 20691378 - 20691332
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||    
T  20691378 tgacaccgacacatatgattacactgaattatgtcattttctcaaat 20691332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 494
Target Start/End: Original strand, 40993336 - 40993374
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgatttt 494  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  40993336 gacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 8039836 - 8039881
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttctcaaat 8039881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 8383315 - 8383270
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||    
T  8383315 gacaccgacacttataattacactgaattatatgattttctcaaat 8383270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 432 - 501
Target Start/End: Complemental strand, 11666026 - 11665957
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||| |||| ||| | |||||||||||||||||| ||||| |||| ||||||||| ||||||    
T  11666026 acgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatcaaat 11665957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 49505155 - 49505200
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||||    
T  49505155 gacactgacacatataattacactaaattatgtgattttctcaaat 49505200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 35222996 - 35222956
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  35222996 gacaccgacacatataattacattgaattatgtgattttct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 498
Target Start/End: Original strand, 10690266 - 10690305
Alignment:
Q  459 accgacacatataatcacactgaattatgtgattttctca 498  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  10690266 accgacaaatataattacactgaattatgtgattttctca 10690305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 11252035 - 11251991
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||  || |||||||||||||||||||||||||||    
T  11252035 tgacaccgacacata--attacactgaattatgtgattttctcaaat 11251991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 501
Target Start/End: Original strand, 32804547 - 32804586
Alignment:
Q  462 gacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaat 32804586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 3962795 - 3962841
Alignment:
Q  457 acaccgacacatataatcacactgaattatgtgattttctcaaataa 503  Q
    ||||||||||||||||| ||||||| |||||| ||||||| ||||||    
T  3962795 acaccgacacatataataacactgagttatgttattttcttaaataa 3962841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 4987259 - 4987337
Alignment:
Q  423 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||| ||| |||||| |||||||||||| | | | |||| |||| | |||| |||||||||||||||||||| ||||||    
T  4987259 gtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaat 4987337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 11313808 - 11313846
Alignment:
Q  463 acacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaat 11313846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 13807228 - 13807182
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||| || | | |||||||||||||||||||||||    
T  13807228 tgacaccgacacatattattatattgaattatgtgattttctcaaat 13807182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 501
Target Start/End: Original strand, 15812800 - 15812867
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| |||||| ||||||| | ||||||| ||  |||||| ||||||| |||||||||||||||||||    
T  15812800 acgtgtcgtgtccgacaccaacacgacaccggca--tataattacactgagttatgtgattttctcaaat 15812867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 16192758 - 16192796
Alignment:
Q  463 acacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  16192758 acacatataattacactgaattatgttattttctcaaat 16192796  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 494
Target Start/End: Complemental strand, 38731276 - 38731238
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgatttt 494  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  38731276 gacaccgacacatataactacactgaattatgtgatttt 38731238  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 6780420 - 6780465
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| |||||||| || |||||||||||||||    
T  6780420 gacaccaacacatataattacactgaactacgtgattttctcaaat 6780465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 7614416 - 7614461
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||| ||||||| | |||||||||||||||||||| ||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttcttaaat 7614461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 15314877 - 15314922
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| ||||||||||| ||||| |||||||||||||| ||||||    
T  15314877 gacaccaacacatataattacactaaattatgtgattttttcaaat 15314922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 501
Target Start/End: Original strand, 17005596 - 17005665
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||| ||||  ||||||| |  |||||||||| |||||| |||||||||||| ||||||| ||||||    
T  17005596 acgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaat 17005665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 25948888 - 25948933
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||||    
T  25948888 gacaccaacacttataattacactgaattatgtgattttttcaaat 25948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 28918059 - 28918014
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| | |||| |||||||||||||||||||| ||||||    
T  28918059 gacaccgacacttgtaattacactgaattatgtgattttttcaaat 28918014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 501
Target Start/End: Complemental strand, 34910391 - 34910330
Alignment:
Q  440 tgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| ||||| ||| ||||||||| | | |||| |||||||||||||||||||| ||||||    
T  34910391 tgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaat 34910330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 501
Target Start/End: Original strand, 41961579 - 41961696
Alignment:
Q  385 ctatgaagcacggacacttttcggattaaccatct-ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaat 483  Q
    ||||||||||||||||||| ||||||||  | | | ||||||| ||| |||||| |||||| | ||| | | ||||||||||| | |||| |||| ||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaat 41961678  T
Q  484 tatgtgattttctcaaat 501  Q
     ||||||| || ||||||    
T  41961679 aatgtgatattttcaaat 41961696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 45451611 - 45451566
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||||||| || | |||||| ||||||||||||||||||    
T  45451611 gacaccgacacatattattatactgaagtatgtgattttctcaaat 45451566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 500
Target Start/End: Original strand, 48202269 - 48202314
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaa 500  Q
    |||||| |||||||||||| ||| | ||||||||||||||||||||    
T  48202269 tgacacagacacatataattacattaaattatgtgattttctcaaa 48202314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 501
Target Start/End: Complemental strand, 53236 - 53193
Alignment:
Q  458 caccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaat 53193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 496
Target Start/End: Original strand, 5973 - 6037
Alignment:
Q  432 acgtgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttct 496  Q
    |||||| |||| | ||||| ||| |||||||||||||||||| |||||| ||| |||||||||||    
T  5973 acgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcattttgtgattttct 6037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 435 - 501
Target Start/End: Complemental strand, 1114 - 1048
Alignment:
Q  435 tgttgtgtccaacaccaatatgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    |||||||||||||||| | |  |||| |||||||||| | |||||||||||||| ||||| ||||||    
T  1114 tgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaat 1048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 420 - 478
Target Start/End: Original strand, 17845 - 17903
Alignment:
Q  420 ccagtgttggatacgtgttgtgtccaacaccaatatgacaccgacacatataatcacac 478  Q
    ||||||| ||| |||||| |||||||||||| ||| ||||||| |||||||||| ||||    
T  17845 ccagtgtcggacacgtgtcgtgtccaacaccgatacgacaccgtcacatataattacac 17903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 494
Target Start/End: Complemental strand, 23478 - 23440
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgatttt 494  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  23478 gacaccgacacttataattacactgaattatgtgatttt 23440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 90902 - 90856
Alignment:
Q  455 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| ||||| ||||||| |||||||||||| ||||||||||||||    
T  90902 tgacatcgacatatataattacactgaattatatgattttctcaaat 90856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 468
Target Start/End: Complemental strand, 16225 - 16180
Alignment:
Q  423 gtgttggatacgtgttgtgtccaacaccaatatgacaccgacacat 468  Q
    ||||||||||||| |||||||| ||||||| | |||||||||||||    
T  16225 gtgttggatacgtattgtgtccgacaccaacacgacaccgacacat 16180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 25769 - 25810
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctc 497  Q
    ||||||||||| |||||| ||||| |||||||||||||||||    
T  25769 gacaccgacacttataattacactaaattatgtgattttctc 25810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Complemental strand, 70336 - 70291
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||||||||| |||||| |||||||||||||| ||||| ||||||    
T  70336 gacaccgacacttataattacactgaattatgttattttttcaaat 70291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 501
Target Start/End: Original strand, 263373 - 263418
Alignment:
Q  456 gacaccgacacatataatcacactgaattatgtgattttctcaaat 501  Q
    ||||| ||||| |||||| ||||||||||||||| |||||||||||    
T  263373 gacactgacacttataattacactgaattatgtggttttctcaaat 263418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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